RNA Bricks - a database of RNA 3D structure motifs and their interactions

RNA Bricks search form

On this page you can query RNA Bricks with RNA 3D structure fragments (up to 40 nucleotides). The query structure can be either covered with or matched within the RNA motifs from the database.

E-mail me when you are done

Here you can shortly describe your query

send the *.pdb or *.pdb.gz file

paste PDB contents to this field

or define PDB id and coma separated residue numbers

Match RNA motifs within the input structure (motifs in query)
or match input structure within the RNA motifs (query in motifs)

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Load example data / see example results

Engine version: 18.04.2014