International institute of molecular and cell biology in Warzawa

Family CTV_rep_sig


Download the aligments for this family. (.stk)

RNA Shape

Level1
(())()()(())(())(())()()((()))()
Level2
()()()()()()()()()()

Consensus Secondary Structure representation

>predicted reference CTV_rep_sig 
UUGAAGUGGACGGAAUAAGUUCCUUGCGGAACUUUACGUCGGGUUGGUAAAACCCCUUAUGAUGGUGAUAUAUCACCAGACAAUAACCGGAUGGGUAAAGUCUUUAAAAUGACCGAGGGGAAAAUUAACCGUAUCCCCUCGUUGGUCUAAGCUCCCACAGAGUGGUAGCGGCCUCAAGUGAGGCCUAACGUAUGCGUGAACCAAAGAAGUUCUCCUUAGAGUGUGUGUUGUUUACCCAACACACUGUCCCUAUGGGGGGCCAACAUAGGCCCA
........((((....(((((((....)))))))..))))(((((.....)))))........(((((....))))).(((....(((.....)))...)))........(((((((((((............))))))))...)))...(((.((((...)))).)))((((((....))))))............((((.......)))).((.(((...((((((((......)))))))).....))).)).(((((......))))).





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