Family IRES_Pesti

Download the aligments for this family. (.stk)

RNA Shape

Level1

((((((()(((())))()))()()))()))()

Level2

(((()()())()())())()

Consensus Secondary Structure representation

>predicted reference IRES_Pesti 
AGUAGGACUAGCAAACGGAGGGACUAGCCAUAGUGGCGAGCUCCCUGGGUGGCCUAAGCCCUGAGUACAGGGCAGUCGUCAGUGGUUCGACGCGAGCAGAAGCCCGCCUCGAGAUGCCAUGUGGACGAGGGCAUGCCCAAGGCACACCUUAACCCUGGCGGGGGUCGCCAGGGUGAAAGCGCGUUACGCGCUGGGAGCACGACCUGAUAGGGUGCUGCAGAGGCCCACUAUUAGGCUAGUAUAAAAAUCUCUGCUGUACAUGGCACAUGGAGUU
......................(((((((.((((((((.((((((..((((((((..((((((....))))))..(((((...((.((((.(((..........))).))))....)).....)))))((((..)))).)))).))))...((((((((((...))))))))))....(((((...))))).)))))).)).(((....)))............))))))...)))))))..................((((...)))).....