International institute of molecular and cell biology in Warzawa

Family LSU_rRNA_eukarya


Download the aligments for this family. (.stk)

Representative Secondary Structure

This structure is extracted from the - 4UG0 - 3D Structure file

4V5O
AACCUGGUUGAUCCUGCCAGUUACAUAUGCUUGUCUUAAAUAUUAACCCAUGCAUGUGCCAGUUCAGUAUUGAACAGCGAAACUGCGAAUGGCUCAUUAAAACAGUUAUAGUUUAUUUGAUAAUUAAAGAUUACAUGGAUAACCGAGCUAAUUGUUGGGCUAAUACAUGCUUAAAAUUCCGUGUCCUGCGACCGGAACGUAUUUAUUAGAUAUUAGACCAAUCGCAGCAAUGUGAUUGAGAUGAAUCAAAGUAACUGAUCGGAUCGAGGUUUACCUCGAUAAAUCAUCUAAGUUUCUGCCCUAUCAGCUCUCGAUGGUAGUGUAUUGGACUACCAUGGCAGUCACGGGUAACGGAGAAUUAGGGUUCGAUUCCGGAGAAGGAGCCUGAGAAACGGCUACUACAACUACGGUUCGGCAGCAGGGAAGAAAAUUGGCCAAUCCUAAUUCAGGGAGCCAGUGACAAGAAAUAGCAAGCUGGGAAACUUACGUUUCUACGGCAUUGAAAUGAGAACAGUGUAAAUCUCUUAGCGAGGAACAAUUGGAGGGCAAGUCAUGGUGCCAGCAGCCGCGGUAAUUCCAGCUCCAAUAGCGUAUAUUAAAGUUGUUGCAGUUAAAAAGCUCGUAGUUGAACUUCUGUUCAGGUUCAUUUCGAUUCGUCGUGUGAAACUGGACAUACGUUUGCAAACUAAAAUCGGC&GUUCGACUUAGGGAGUAAACAUUUUACUGUGAAAAAAUUAGAGUGUUCCAGGCAGGUUUUAGCCCGAAUACAUUAGCAUGGAAUAAUGGAAUAGGACUAAGUCCAUUUUAUUGGUUCUUGGAUUUGGUAAUGAUUAAUAGGGACAGUUGGGGGCAUUAGUAUUUAAUAGUCAGAGGUGAAAUUCUUGGAUUUAUUAAGGACUAACUAAUGCGAAAGCAUUUGCCAAAGAUGUUUUCAUUAAUCAAGAACGAAAGUUAGGGGAUCAAAGACGAUCAGAUACCGUCGUAGUCUUAACUAUAAACUAUACCGACUCGGGAUCGGCUGGAAUAAAUGUCCAGUCGGCACCGUAUGAGAAAUCAAAGUCUUUGGGUUCUGGGGGAAGUAUGGUACGCAAGUCUGAAACUUAAAGGAAUUGACGGAACAGCACACCAGAAGUGGAACCUGCGGCUUAAUUUGACUCAACACGGGGAAACUCACGAGCGCAAGACAGAGAAGGGAUUGACAGAUUGAGAGCUCUUUCUUGAUUCUUUGGGUGGUGGUGCAUGGCCGUUCUUAGUUGGUGGAGUGAUUUGUCUGGUUAAUUCCGUUAACGAACGAGACCUUAACCUGCUAACUAGUCUGCUUGUAAAUAACAGGUUGUACUUCUUAGAGGGACUAUUGUGCAAUAAGCCAAUGGAAGUUUAAGGCAAUAACAGGUCUGUGAUGCCCCUAGACGUGCUCGGCCGCACGCGCGUUACAAUGACUGGCGCAAAAAGUAUUUCCUGUCCUGGGAAGGUACGGGUAAUCUUAUUAAUACCAGUCGUGUUAGGGAUAGUUCUUUGGAAUUGUGGAUCUUGAACGAGGAAUUUCUAGUAAGUGCAAGUCAUCAGCUUGCGUUGAUUAUGUCCCUGCCGUUUGUACACACCGCCCGUCGCUUGUAGUAACGAAUGGUCUGGUGAACCUUCUGGACUGCGACAGCAAUGUUGCGGAAAAAUAAGUAAACCCUACCAUUUGGAACAACAAGAAGUCGUAACAAGGUAUCUGUAGGUGAACCUGCAGAUGGAUCAUUA&AACCUGGUUGAUCCUGCCAGUUACAUAUGCUUGUCUUAAAUAUUAACCCAUGCAUGUGCCAGUUCAGUAUUGAACAGCGAAACUGCGAAUGGCUCAUUAAAACAGUUAUAGUUUAUUUGAUAAUUAAAGAUUACAUGGAUAACCGAGCUAAUUGUUGGGCUAAUACAUGCUUAAAAUUCCGUGUCCUGCGACCGGAACGUAUUUAUUAGAUAUUAGACCAAUCGCAGCAAUGUGAUUGAGAUGAAUCAAAGUAACUGAUCGGAUCGAGGUUUACCUCGAUAAAUCAUCUAAGUUUCUGCCCUAUCAGCUCUCGAUGGUAGUGUAUUGGACUACCAUGGCAGUCACGGGUAACGGAGAAUUAGGGUUCGAUUCCGGAGAAGGAGCCUGAGAAACGGCUACUACAACUACGGUUCGGCAGCAGGGAAGAAAAUUGGCCAAUCCUAAUUCAGGGAGCCAGUGACAAGAAAUAGCAAGCUGGGAAACUUACGUUUCUACGGCAUUGAAAUGAGAACAGUGUAAAUCUCUUAGCGAGGAACAAUUGGAGGGCAAGUCAUGGUGCCAGCAGCCGCGGUAAUUCCAGCUCCAAUAGCGUAUAUUAAAGUUGUUGCAGUUAAAAAGCUCGUAGUUGAACUUCUGUUCAGGUUCAUUUCGAUUCGUCGUGUGAAACUGGACAUACGUUUGCAAACUAAAAUCGGC&GUUCGACUUAGGGAGUAAACAUUUUACUGUGAAAAAAUUAGAGUGUUCCAGGCAGGUUUUAGCCCGAAUACAUUAGCAUGGAAUAAUGGAAUAGGACUAAGUCCAUUUUAUUGGUUCUUGGAUUUGGUAAUGAUUAAUAGGGACAGUUGGGGGCAUUAGUAUUUAAUAGUCAGAGGUGAAAUUCUUGGAUUUAUUAAGGACUAACUAAUGCGAAAGCAUUUGCCAAAGAUGUUUUCAUUAAUCAAGAACGAAAGUUAGGGGAUCAAAGACGAUCAGAUACCGUCGUAGUCUUAACUAUAAACUAUACCGACUCGGGAUCGGCUGGAAUAAAUGUCCAGUCGGCACCGUAUGAGAAAUCAAAGUCUUUGGGUUCUGGGGGAAGUAUGGUACGCAAGUCUGAAACUUAAAGGAAUUGACGGAACAGCACACCAGAAGUGGAACCUGCGGCUUAAUUUGACUCAACACGGGGAAACUCACGAGCGCAAGACAGAGAAGGGAUUGACAGAUUGAGAGCUCUUUCUUGAUUCUUUGGGUGGUGGUGCAUGGCCGUUCUUAGUUGGUGGAGUGAUUUGUCUGGUUAAUUCCGUUAACGAACGAGACCUUAACCUGCUAACUAGUCUGCUUGUAAAUAACAGGUUGUACUUCUUAGAGGGACUAUUGUGCAAUAAGCCAAUGGAAGUUUAAGGCAAUAACAGGUCUGUGAUGCCCCUAGACGUGCUCGGCCGCACGCGCGUUACAAUGACUGGCGCAAAAAGUAUUUCCUGUCCUGGGAAGGUACGGGUAAUCUUAUUAAUACCAGUCGUGUUAGGGAUAGUUCUUUGGAAUUGUGGAUCUUGAACGAGGAAUUUCUAGUAAGUGCAAGUCAUCAGCUUGCGUUGAUUAUGUCCCUGCCGUUUGUACACACCGCCCGUCGCUUGUAGUAACGAAUGGUCUGGUGAACCUUCUGGACUGCGACAGCAAUGUUGCGGAAAAAUAAGUAAACCCUACCAUUUGGAACAACAAGAAGUCGUAACAAGGUAUCUGUAGGUGAACCUGCAGAUGGAUCAUUA
...((((....[[[[.))))(.(.((((((...((((..((.....(((.(((..(.....((...(..........)...)){.)......(((.......(((..((..((....((((..........(...((.....((.(.(.....).).))......)).........(((((.(((....)))))))).(.(.(((.(.........[[[[[[(.((....)).).....(......)..).))).)...)..)((((((....))))))...))))...))))..))).((.....((.....((((((((.......)))))))).)).......))...(((.(((......)))....)))))).((.(((..........))).)).((((....))).)...)))))))......(.(((...((((.}...))).))))).)...)))).....(((((.(.(((((....)))))..).)).)))....(.(.(.((.........)))..)......)..((((([[....(.(.(((.....((..]])).......))))))))))..)))))).).)..{......((({{...(.(.((....((.((....(((.(((.((((...(((....)))..)))).))).)))....(((.(...((((..(((.(&)..))).))))...).)))...(((.(..(.......(................(.......)......).......).)..).)).........((.((.((((....]]]]]]...)))).)).)).....))....(..(((.((...((((..((..(((((((..(.((........))...)...)))))))..)).......((....))...))))..)).)))...)...))....)).).(..((((.(....(...((((.........))))...).).))))..).......(((.((.(((...((.(((((.(....)))))).))...)))...((..}}))...))...}.)))))))...(.......(.((....))).....)....]]]]..((((..(((.(((.((..(((.(..(((..(((((.......(........)...........(((((.(....((.(((....(..((.(((........))).))....)))).))...((.((...(((.(((((....(((.(((((....)))..(.((......)))...)).)))....(((((.((..((((..((((..(.(((.....))).)..).)))..)))).))..(.((((..........))))....)..)))))....))).))....).)).)))).....).)))))...)).)))..))).(...((((((.......((.....((.(((((....))).)).))....))........))))))......(....((.((............)).))....)..)..).))).....(..(((((.......)))))..)......))...))).))).)).))..(.(..((.(.(((((.....(.((((((..(((..((.(..(...(.((.(((....))).)).)...)..).))..)))..)))))).).....)))))..).))...)..)..(((((.(((....))).))))).........&...((((..[.[[[[.))))(.(.((((((...((((..((.....(((.(((..(.....((...(..........)...)){.)......(((.......(((..((..((....((((..........(...((.....((.(.(.....).).))......)).........(((((.(((....)))))))).(.(.(((.(.........[[[[[[(.((....)).).....(......)..).))).)...)..)((((((....))))))...))))...))))..))).((.....((.....((((((((.......)))))))).)).......))...(((.(((......)))....)))))).((.(((..........))).)).((((....))).)...)))))))......(.(((...((((.}...))).))))).)...)))).....(((((.(.(((((....)))))..).)).)))....(.(.(.((.........)))..)......)..((((([[....(.(.(((.....((..]])).......))))))))))..)))))).).)..{......((({{...(.(.((....((.((....(((.(((.((((...(((....)))..)))).))).)))....(((.(...((((..(((.(&)..))).))))...).)))...(((.(..(.......(................(.......)......).......).)..).)).........((.((.((((....]]]]]]...)))).)).)).....))....(..(((.((...((((..((..(((((((..(.((........))...)...)))))))..)).......((....))...))))..)).)))...)...))....)).).(..((((.(....(...((((.........))))...).).))))..).......(((.((.(((...((.(((((.(....)))))).))...)))...((..}}))...))...}.)))))))...(.......(.((....))).....)....]]]].]((((..(((.(((.((..(((.(..(((..(((((.......(........)...........(((((.(....((.(((....(..((.(((........))).))....)))).))...((.((...(((.(((((....(((.(((((....)))..(.((......)))...)).)))....(((((.((..((((..((((..(.(((.....))).)..).)))..)))).))..(.((((..........))))....)..)))))....))).))....).)).)))).....).)))))...)).)))..))).(...((((((.......((.....((.(((((....))).)).))....))........))))))......(....((.((............)).))....)..)..).))).....(..(((((.......)))))..)......))...))).))).)).))..(.(..((.(.(((((.....(.((((((..(((..((.(..(...(.((.(((....))).)).)...)..).))..)))..)))))).).....)))))..).))...)..)..(((((.(((....))).))))).........