International institute of molecular and cell biology in Warzawa

Family LSU_trypano_mito


Download the aligments for this family. (.stk)

RNA Shape

Level1
()(((()()()()()((((())))))))
Level2
()(()()()()()())

Consensus Secondary Structure representation

>predicted reference LSU_trypano_mito 
UUUUAAAUGCGUUUAUUAAAUGCGUUUGUCUAAGAAAUAUAUUUAAGAUUAUUCUUGUAUAUAUAUUUAUAUAUUAAUAAUUCUUAAAAUAAAAAAAUUUCCUCAAAAUAAAUAUUUUAGUAGCAUAGUAAUUUAUUAACUAAUUAUUAAAGUGUUCCAUAGAAAAUUUUUAAAUUAUAACAAAUAAAAUAAAUUAUAAAUUAAAAUAAAAAUUUUAAUAAAAAUUAAAAAAUUAAAAUAGGGCAAGUCCUACUCUCCUUUACAAAGAGAACGUUUAUACGUAAUUGUAUGUUUGAUUGGGGCAAUACUAUAUUUAUUUAUAUAGAAAAAGAACUAUAUUUAUUGAAAUAAUAAAAGGUUCGAGCAGGUUAACAAGCAUUAAUACUAAAUGUGUUUCAUCGUCUACUUAUUGCUAAUAUAAUUGAUUGUUCAUCAAAAAUGCAAUUCGUUAGUUGGGUUAAAAUCGUUGUAAAGCAGAUUUGUUUAUAUAUUUAAUUUUUAUAAUAAUUAAAAAUUAAUAUUAGUACGCAAGGAUUUAUUAUUUGUAAUUUAAAUUAAAAU
..............................................................................................................................................................................................................................................((((......)))).(((.((((((((.((..((((....)))).(((((.............))))).((((((......)))))).....(((((.....................)))))............((((((...........))))))..(((.((((..(((((.........(((....)))........)))))..).))).))).......)).)))))))).)))...................................................................................





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