Family PreQ1-III

Download the aligments for this family. (.stk)

RNA Shape

Level1

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Level2

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Consensus Secondary Structure representation

Comment:Note that due to crystal packing there is no intramolecular L4-RBS pseudoknot formation in the 4RZD structure, instead there is an intermolecular L4-RBS interaction (Liberman et. al doi:10.1073/pnas.1503955112).

>predicted reference PreQ1-III
GAGCAACUUAGGAUUUUAGGCUCCCCGGCGCGUCUCGAACCGCGCCGGGCCAAACCCCCCGGGGCUGGCGGCCCCGGGGCGGUCAAAAUCCAUCCGCUGGAG
[[[[......(((((((..]]]](((((((((........)))))))))....(((.((((((([[[[[[[)))))))..))).)))))))..]]]]]]]..