International institute of molecular and cell biology in Warzawa

Family isrH


Download the aligments for this family. (.stk)

RNA Shape

Level1
()((()))((())(()((((((()(())))))))))()
Level2
()()(()(()(()())))()

Consensus Secondary Structure representation

>predicted reference isrH 
GGGGAUAUUCAGUUAUCCCCCUCUCUAAAGGAGGCCGGUAACGCGCCGAUACAAGAGACAUUGCCCUACAAACAGUAACGUCGUUAUCUGUCAUGCCACCGUGGGUUAGCGGUCAUGGCUAACCAAAUAGGGCAGGUUAUUGCAAAGAGACAUCCGCGUUUAUACCCAAAAUAAUCCGUAGCCAACACAUAAGCAACUUGAAGUAUGAAGGGUAUAUGUCUGAUGGAAAACCGUCCCCGGUGAGUAGGGCAAUGGCGCCGGAGGGGCUCCGGCGCUUUUU
(((((((......))))))).(((((......(((((....)).)))......)))))(((((((((((..((((((((...)))).)))).....(((((..(((((((.......))))))).....(((..((((.((.((...(((((........(((((((..........((.....)).((((..(.....)...))))..))))))))))))..)).))))))..)))))))).)))))))))))(((((((((...))))))))).....





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