International institute of molecular and cell biology in Warzawa

Family rne-II


Download the aligments for this family. (.stk)

RNA Shape

Level1
(((()())))()(((()))())(())()
Level2
(()())()(()())()()

Consensus Secondary Structure representation

>predicted reference rne-II 
AUACGUGUAGGGUGGAGAUGCACGGCCGUCGGACUGCGUAGCAUAAAGCUUGAUACAGACGCUUUAUUUCGUCCGCUGCCGACGGCCGAUUCCUCCUCCUGACUGAGUGCUUUAUGACCGUUUGGUUGAUUCGGACCACAGCAAGCAGGACACGUCGUCGCGACAACGGCAGGCCGUCAAUCGGCCUGCCGAACGUCGCUAGACACGGGGGUGGCCCGACCACCCCUGACGCACCUUGACACCGACCAUGAGAAGUCGUGUGUGCCGAACGCCGUUUCCGGCAGCCCGGAAACCGA
.............((((.....((((((((((...(((.(((.....))).......((((........)))))))..))))))))))....))))(((((............................................)))))..(((((((((((...((((((((((.....))))))))))....))))..)))...(((((((.....))))))).)))).......((((((((........)))).))))..........(((((((......)))))))...





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