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RNA Secondary Structure Atlas - PDB - IRE_II
RNA: 3SN2_B
| GAUUAUCGGAAGCAGUGCCUUCCAUAAUC | |||
| Reference structure (std) | [ sec struct ] | ((((((.((((((...).))))))))))) | |
| Reference structure (ext) | [ sec struct ] | ((((((.((((((...).))))))))))) | |
| Afold | [ FASTA input ] | [ sec struct ] | ((((((.(((((......))))))))))) |
| Alterna | [ FASTA input ] | [ sec struct ] | (((((..(((((......))))).))))) |
| CRWrnafold | [ FASTA input ] | [ sec struct ] | ((((((.(((((......))))))))))) |
| CentroidFold (ext) | [ FASTA input ] | [ sec struct ] | ((((((.(((((......))))))))))) |
| CentroidFold | [ FASTA input ] | [ sec struct ] | ((((((.(((((......))))))))))) |
| CentroidHomfold‑LAST | [ FASTA input ] | [ sec struct ] | .(((((.(((((......)))))))))). |
| ContextFold | [ FASTA input ] | [ sec struct ] | ((((((.(((((......))))))))))) |
| Contrafold | [ FASTA input ] | [ sec struct ] | ((((((.(((((......))))))))))) |
| Cylofold | [ FASTA input ] | [ sec struct ] | .......(((((......)))))...... |
| Fold | [ FASTA input ] | [ sec struct ] | ((((((.((((((...).))))))))))) |
| HotKnots | [ FASTA input ] | [ sec struct ] | ((((((.(((((......))))))))))) |
| IPknot | [ FASTA input ] | [ sec struct ] | ((((((.(((((......))))))))))) |
| MCFold (ext) | [ FASTA input ] | [ sec struct ] | (((((((((((((...))))))))))))) |
| MCFold | [ FASTA input ] | [ sec struct ] | ((((((.(((.((...)).))).)))))) |
| MaxExpect | [ FASTA input ] | [ sec struct ] | ((((((.((((((...).))))))))))) |
| McQFold | [ FASTA input ] | [ sec struct ] | ((((((.(((((......))))))))))) |
| NanoFolder | [ FASTA input ] | [ sec struct ] | ((((((.(((((......))))))))))) |
| Pknots | [ FASTA input ] | [ sec struct ] | ((((((.(((((......))))))))))) |
| PknotsRG | [ FASTA input ] | [ sec struct ] | ((((((.(((((......))))))))))) |
| ProbKnot | [ FASTA input ] | [ sec struct ] | ((((((.((((((...).))))))))))) |
| RDfolder | [ FASTA input ] | [ sec struct ] | ((((((.(((((......))))))))))) |
| RNASLOpt | [ FASTA input ] | [ sec struct ] | ((((((.(((((......))))))))))) |
| RNAfold | [ FASTA input ] | [ sec struct ] | ((((((.(((((......))))))))))) |
| RNAshapes | [ FASTA input ] | [ sec struct ] | ((((((.(((((......))))))))))) |
| RNAsubopt | [ FASTA input ] | [ sec struct ] | ((((((.(((((......))))))))))) |
| RNAwolf (ext) | [ FASTA input ] | [ sec struct ] | ((((((.((((((...).))))))))))) |
| RNAwolf | [ FASTA input ] | [ sec struct ] | ((((((.((((((...).))))))))))) |
| Sfold | [ FASTA input ] | [ sec struct ] | ((((((.(((((......))))))))))) |
| UNAFold | [ FASTA input ] | [ sec struct ] | ((((((.(((((......))))))))))) |
| Vsfold4 | [ FASTA input ] | [ sec struct ] | ((((((.(((((......))))))))))) |
| Vsfold5 | [ FASTA input ] | [ sec struct ] | ((((((.(((((......))))))))))) |