Table of contents:
- Overview
- Performance Plots
- Performance of Cylofold
- scored higher in this pairwise comparison
- Performance of Carnac(seed)
- scored lower in this pairwise comparison
- Compile and download dataset for Cylofold & Carnac(seed) [.zip] - may take several seconds...
Overview
| Metric |
Cylofold |
|
Carnac(seed) |
|---|
| MCC |
0.625 |
>
|
0.212 |
| Average MCC ± 95% Confidence Intervals |
0.661
±
0.144
|
>
|
0.095
±
0.149
|
| Sensitivity |
0.538 |
>
|
0.045 |
| Positive Predictive Value |
0.731 |
<
|
1.000 |
| Total TP |
272 |
>
|
23 |
| Total TN |
68639 |
<
|
68988 |
| Total FP |
122 |
>
|
0 |
| Total FP CONTRA |
15 |
>
|
0 |
| Total FP INCONS |
85 |
>
|
0 |
| Total FP COMP |
22 |
>
|
0 |
| Total FN |
234 |
<
|
483 |
| P-value |
2.76499031155e-08 |
Performance of Cylofold
- scored higher in this pairwise comparison
1. Total counts & total scores for Cylofold
| Total Base Pair Counts |
|---|
| Total TP |
272 |
| Total TN |
68639 |
| Total FP |
122 |
| Total FP CONTRA |
15 |
| Total FP INCONS |
85 |
| Total FP COMP |
22 |
| Total FN |
234 |
| Total Scores |
|---|
| MCC |
0.625 |
| Average MCC ± 95% Confidence Intervals |
0.661
±
0.144
|
| Sensitivity |
0.538 |
| Positive Predictive Value |
0.731 |
| Nr of predictions |
15 |
Performance of Carnac(seed)
- scored lower in this pairwise comparison
1. Total counts & total scores for Carnac(seed)
| Total Base Pair Counts |
|---|
| Total TP |
23 |
| Total TN |
68988 |
| Total FP |
0 |
| Total FP CONTRA |
0 |
| Total FP INCONS |
0 |
| Total FP COMP |
0 |
| Total FN |
483 |
| Total Scores |
|---|
| MCC |
0.212 |
| Average MCC ± 95% Confidence Intervals |
0.095
±
0.149
|
| Sensitivity |
0.045 |
| Positive Predictive Value |
1.000 |
| Nr of predictions |
15 |
Matthews Correlation Coeffient, Sensitivity and Positive Predictive Value have been calculated based
on the paper by Gardener & Giegerich, 2004.
| 
