CompaRNA - on-line benchmarks of RNA structure prediction methods

Laboratory of Structural Bioinformatics @ Adam Mickiewicz University in Poznan

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Overview

Metric	Fold		RSpredict(seed)
MCC	0.522	>	0.369
Average MCC ± 95% Confidence Intervals	0.589 ± 0.017	>	0.246 ± 0.022
Sensitivity	0.521	>	0.229
Positive Predictive Value	0.524	<	0.597
Total TP	39021	>	17152
Total TN	96980656	<	97026395
Total FP	41005	>	13582
Total FP CONTRA	4968	>	1581
Total FP INCONS	30481	>	9998
Total FP COMP	5556	>	2003
Total FN	35910	<	57779
P-value	3.56938820447e-08

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Performance plots

Comparison of performance of Fold and RSpredict(seed). Positive Predictive Value (PPV) is plotted against sensitivity. Each dot represents a single test of each method. See tables below for raw data (individual counts for Fold and RSpredict(seed)).
Average Matthews Correlation Coefficients (MCC) with 95% confidence intervals (CIs) were plotted for different RNA families, for which at least 3 members were present in the benchmarking dataset. 'n' denotes the number of MCCs used to calculate the average and CI. See tables below for raw data (individual counts for Fold and RSpredict(seed)).
Comparison of average Matthews Correlation Coefficients (MCCs) for Fold and RSpredict(seed). The whiskers correspond to 95% confidence intervals (CIs). 'n' denotes the number of MCCs used to calculate average MCCs and CIs. See tables below for raw data (individual counts for Fold and RSpredict(seed)).

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Performance of Fold - scored higher in this pairwise comparison

1. Total counts & total scores for Fold

Total Base Pair Counts
Total TP	39021
Total TN	96980656
Total FP	41005
Total FP CONTRA	4968
Total FP INCONS	30481
Total FP COMP	5556
Total FN	35910

Total Scores
MCC	0.522
Average MCC ± 95% Confidence Intervals	0.589 ± 0.017
Sensitivity	0.521
Positive Predictive Value	0.524
Nr of predictions	702

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2. Individual counts for Fold [ download as .csv ]

RNA Chain	Rfam family	MCC	SENS	PPV	TP	TN	FP	FP CONTRA	FP INCONS	FP COMP	FN
ASE_00001	RNaseP_arch links to Rfam database...	0.84	0.81	0.87	61	34121	17	2	7	8	14
ASE_00002	RNaseP_arch links to Rfam database...	0.70	0.67	0.73	49	35444	21	4	14	3	24
ASE_00004	RNaseP_bact_a links to Rfam database...	0.68	0.68	0.69	66	47799	34	9	21	4	31
ASE_00005	RNaseP_bact_a links to Rfam database...	0.73	0.68	0.78	80	57868	29	0	22	7	37
ASE_00006	RNaseP_bact_a links to Rfam database...	0.49	0.51	0.48	47	47488	55	11	40	4	46
ASE_00007	RNaseP_bact_a links to Rfam database...	0.53	0.52	0.54	57	59579	56	2	47	7	53
ASE_00009	RNaseP_arch links to Rfam database...	0.38	0.37	0.38	25	26041	42	4	36	2	42
ASE_00010	RNaseP_bact_b links to Rfam database...	0.60	0.60	0.60	49	49688	50	3	30	17	33
ASE_00012	RNaseP_bact_a links to Rfam database...	0.35	0.34	0.35	42	73801	81	7	70	4	81
ASE_00014	RNaseP_arch links to Rfam database...	0.42	0.42	0.43	44	54182	67	2	57	8	62
ASE_00017	RNaseP_nuc links to Rfam database...	0.21	0.23	0.19	15	50959	87	21	45	21	49
ASE_00018	RNaseP_bact_a links to Rfam database...	0.54	0.51	0.56	69	80478	56	1	53	2	65
ASE_00020	RNaseP_bact_a links to Rfam database...	0.56	0.54	0.58	68	73803	52	8	41	3	58
ASE_00021	RNaseP_bact_a links to Rfam database...	0.63	0.59	0.68	94	104057	52	4	41	7	66
ASE_00022	RNaseP_bact_b links to Rfam database...	0.28	0.27	0.29	34	82911	86	6	77	3	90
ASE_00023	RNaseP_bact_a links to Rfam database...	0.64	0.65	0.64	82	84127	49	5	41	3	45
ASE_00025	RNaseP_nuc links to Rfam database...	0.24	0.27	0.21	19	78516	120	10	61	49	52
ASE_00026	RNaseP_bact_a links to Rfam database...	0.60	0.55	0.64	61	59590	42	3	31	8	49
ASE_00028	RNaseP_bact_b links to Rfam database...	0.72	0.70	0.75	88	84548	39	6	24	9	38
ASE_00029	RNaseP_bact_a links to Rfam database...	0.54	0.52	0.57	64	82915	53	7	42	4	58
ASE_00030	RNaseP_bact_a links to Rfam database...	0.63	0.61	0.66	88	85357	50	2	44	4	57
ASE_00031	RNaseP_bact_a links to Rfam database...	0.52	0.50	0.53	63	86618	58	3	52	3	63
ASE_00032	RNaseP_bact_a links to Rfam database...	0.54	0.53	0.55	63	80086	57	7	44	6	55
ASE_00033	RNaseP_bact_a links to Rfam database...	0.28	0.26	0.30	32	64873	77	7	68	2	89
ASE_00035	RNaseP_bact_a links to Rfam database...	0.24	0.24	0.24	28	70384	91	9	79	3	90
ASE_00036	RNaseP_bact_a links to Rfam database...	0.51	0.48	0.53	64	75734	64	5	52	7	68
ASE_00037	RNaseP_bact_a links to Rfam database...	0.37	0.35	0.39	39	59239	67	2	60	5	71
ASE_00038	RNaseP_bact_a links to Rfam database...	0.43	0.43	0.44	43	53530	58	2	53	3	58
ASE_00040	RNaseP_bact_a links to Rfam database...	0.48	0.46	0.50	61	78881	67	4	57	6	72
ASE_00041	RNaseP_bact_a links to Rfam database...	0.44	0.42	0.46	45	57532	56	5	48	3	63
ASE_00042	RNaseP_bact_a links to Rfam database...	0.44	0.41	0.46	60	89970	74	3	67	4	85
ASE_00044	RNaseP_bact_a links to Rfam database...	0.73	0.73	0.73	77	54510	33	4	24	5	28
ASE_00045	RNaseP_bact_b links to Rfam database...	0.66	0.66	0.66	53	47198	34	6	21	7	27
ASE_00046	RNaseP_bact_a links to Rfam database...	0.37	0.35	0.39	36	50310	59	9	48	2	67
ASE_00047	RNaseP_bact_a links to Rfam database...	0.60	0.58	0.62	75	74184	47	2	44	1	55
ASE_00052	RNaseP_bact_a links to Rfam database...	0.56	0.53	0.59	59	61325	47	8	33	6	53
ASE_00053	RNaseP_bact_a links to Rfam database...	0.61	0.58	0.64	77	79281	50	4	39	7	56
ASE_00057	RNaseP_bact_a links to Rfam database...	0.60	0.60	0.61	80	82083	56	8	44	4	54
ASE_00064	RNaseP_bact_a links to Rfam database...	0.37	0.38	0.36	34	45357	67	6	54	7	55
ASE_00066	RNaseP_bact_a links to Rfam database...	0.62	0.59	0.66	77	72273	42	2	38	2	53
ASE_00068	RNaseP_bact_a links to Rfam database...	0.51	0.48	0.53	41	37598	41	2	34	5	44
ASE_00069	RNaseP_bact_a links to Rfam database...	0.64	0.62	0.66	87	82897	47	5	39	3	53
ASE_00074	RNaseP_bact_a links to Rfam database...	0.48	0.47	0.49	56	67782	59	4	54	1	63
ASE_00075	RNaseP_bact_a links to Rfam database...	0.65	0.61	0.69	99	108668	53	4	40	9	63
ASE_00076	RNaseP_bact_a links to Rfam database...	0.50	0.48	0.52	57	68156	55	2	50	3	61
ASE_00077	RNaseP_bact_a links to Rfam database...	0.57	0.56	0.58	48	45067	41	4	31	6	38
ASE_00078	RNaseP_bact_a links to Rfam database...	0.76	0.76	0.76	63	42988	26	3	17	6	20
ASE_00079	RNaseP_bact_a links to Rfam database...	0.52	0.50	0.54	50	55518	44	2	41	1	50
ASE_00080	RNaseP_bact_a links to Rfam database...	0.55	0.54	0.57	66	71516	54	5	44	5	57
ASE_00081	RNaseP_bact_a links to Rfam database...	0.51	0.52	0.52	50	49673	49	5	42	2	47
ASE_00082	RNaseP_bact_a links to Rfam database...	0.77	0.73	0.81	85	70395	32	3	17	12	31
ASE_00083	RNaseP_bact_a links to Rfam database...	0.59	0.58	0.60	64	62375	47	8	34	5	46
ASE_00084	RNaseP_bact_a links to Rfam database...	0.59	0.60	0.58	59	53527	45	6	36	3	40
ASE_00087	RNaseP_bact_a links to Rfam database...	0.76	0.72	0.80	103	88281	32	3	23	6	41
ASE_00090	RNaseP_bact_a links to Rfam database...	0.66	0.66	0.65	67	55508	43	4	32	7	34
ASE_00092	RNaseP_bact_a links to Rfam database...	0.50	0.50	0.50	56	63434	60	12	44	4	57
ASE_00096	RNaseP_bact_a links to Rfam database...	0.47	0.45	0.50	52	63441	54	4	49	1	63
ASE_00099	RNaseP_bact_a links to Rfam database...	0.66	0.63	0.70	75	64513	38	1	31	6	45
ASE_00100	RNaseP_nuc links to Rfam database...	0.29	0.30	0.29	23	82135	117	6	51	60	53
ASE_00102	RNaseP_bact_a links to Rfam database...	0.41	0.40	0.43	66	117700	94	7	82	5	100
ASE_00104	RNaseP_bact_a links to Rfam database...	0.73	0.67	0.78	80	64159	28	1	21	6	39
ASE_00105	RNaseP_bact_a links to Rfam database...	0.39	0.38	0.41	42	64158	69	8	53	8	69
ASE_00107	RNaseP_bact_a links to Rfam database...	0.64	0.62	0.67	79	73035	44	2	37	5	48
ASE_00108	RNaseP_nuc links to Rfam database...	0.43	0.44	0.42	28	46905	67	5	33	29	35
ASE_00111	RNaseP_nuc links to Rfam database...	0.38	0.46	0.31	26	50003	78	21	36	21	31
ASE_00112	RNaseP_bact_a links to Rfam database...	0.75	0.73	0.77	85	75356	33	2	23	8	31
ASE_00114	RNaseP_bact_b links to Rfam database...	0.36	0.35	0.36	27	45377	59	3	44	12	50
ASE_00115	RNaseP_bact_a links to Rfam database...	0.68	0.68	0.68	69	54514	40	5	27	8	32
ASE_00116	RNaseP_arch links to Rfam database...	0.20	0.20	0.20	13	31560	56	5	48	3	53
ASE_00118	RNaseP_bact_a links to Rfam database...	0.32	0.31	0.33	32	60628	70	5	61	4	70
ASE_00119	RNaseP_bact_a links to Rfam database...	0.81	0.81	0.82	87	62729	21	2	17	2	21
ASE_00120	RNaseP_arch links to Rfam database...	0.50	0.49	0.51	46	46880	45	4	41	0	48
ASE_00121	RNaseP_arch links to Rfam database...	0.25	0.25	0.25	23	45059	70	6	62	2	69
ASE_00122	RNaseP_bact_a links to Rfam database...	0.45	0.45	0.45	40	43276	50	2	47	1	48
ASE_00123	RNaseP_bact_a links to Rfam database...	0.53	0.51	0.55	43	38425	39	2	33	4	42
ASE_00125	RNaseP_bact_a links to Rfam database...	0.71	0.66	0.77	58	39265	27	0	17	10	30
ASE_00126	RNaseP_bact_a links to Rfam database...	0.63	0.63	0.62	52	40386	32	3	29	0	30
ASE_00128	RNaseP_bact_a links to Rfam database...	0.66	0.64	0.68	64	53207	36	5	25	6	36
ASE_00129	RNaseP_bact_a links to Rfam database...	0.70	0.68	0.74	75	62733	34	3	24	7	36
ASE_00131	RNaseP_bact_a links to Rfam database...	0.61	0.58	0.64	49	39264	35	1	26	8	36
ASE_00132	RNaseP_bact_a links to Rfam database...	0.62	0.59	0.65	56	50317	34	4	26	4	39
ASE_00134	RNaseP_bact_a links to Rfam database...	0.41	0.42	0.41	40	50305	61	8	50	3	55
ASE_00135	RNaseP_bact_a links to Rfam database...	0.49	0.48	0.50	52	63086	59	7	45	7	57
ASE_00136	RNaseP_bact_a links to Rfam database...	0.73	0.71	0.76	65	48120	28	0	20	8	27
ASE_00137	RNaseP_bact_a links to Rfam database...	0.76	0.74	0.77	73	48421	28	4	18	6	25
ASE_00138	RNaseP_bact_a links to Rfam database...	0.49	0.48	0.51	39	40393	43	4	34	5	42
ASE_00139	RNaseP_bact_a links to Rfam database...	0.51	0.49	0.54	51	54190	50	2	42	6	53
ASE_00140	RNaseP_bact_a links to Rfam database...	0.68	0.64	0.73	80	70767	32	4	25	3	45
ASE_00142	RNaseP_bact_a links to Rfam database...	0.68	0.66	0.71	80	67048	38	3	30	5	42
ASE_00145	RNaseP_arch links to Rfam database...	0.45	0.44	0.46	49	70018	68	7	51	10	62
ASE_00146	RNaseP_bact_a links to Rfam database...	0.60	0.56	0.64	69	70769	42	1	37	4	55
ASE_00148	RNaseP_arch links to Rfam database...	0.67	0.66	0.69	101	112428	49	4	42	3	53
ASE_00151	RNaseP_bact_a links to Rfam database...	0.62	0.60	0.65	59	51912	39	10	22	7	39
ASE_00153	RNaseP_nuc links to Rfam database...	0.57	0.60	0.54	44	57549	73	9	28	36	29
ASE_00154	RNaseP_arch links to Rfam database...	0.58	0.58	0.58	62	65234	49	4	41	4	45
ASE_00155	RNaseP_arch links to Rfam database...	0.60	0.59	0.60	84	93389	61	10	45	6	58
ASE_00161	RNaseP_bact_b links to Rfam database...	0.47	0.49	0.45	43	53533	57	15	37	5	44
ASE_00163	RNaseP_bact_a links to Rfam database...	0.33	0.31	0.34	29	53216	65	5	51	9	64
ASE_00165	RNaseP_bact_a links to Rfam database...	0.43	0.43	0.44	43	52878	56	5	49	2	58
ASE_00168	RNaseP_nuc links to Rfam database...	0.29	0.38	0.23	24	60621	95	32	49	14	40
ASE_00169	RNaseP_bact_a links to Rfam database...	0.56	0.53	0.59	57	57194	46	7	33	6	50
ASE_00170	RNaseP_bact_a links to Rfam database...	0.79	0.76	0.83	71	48742	24	2	13	9	22
ASE_00171	RNaseP_bact_a links to Rfam database...	0.56	0.55	0.58	52	48426	40	3	35	2	42
ASE_00172	RNaseP_bact_a links to Rfam database...	0.60	0.60	0.60	64	58890	44	5	37	2	42
ASE_00174	RNaseP_bact_a links to Rfam database...	0.49	0.49	0.50	53	60968	56	8	46	2	56
ASE_00175	RNaseP_bact_a links to Rfam database...	0.71	0.69	0.73	74	59929	34	2	26	6	33
ASE_00176	RNaseP_bact_a links to Rfam database...	0.50	0.47	0.54	52	59934	49	3	42	4	58
ASE_00179	RNaseP_bact_a links to Rfam database...	0.49	0.50	0.48	42	44166	45	7	38	0	42
ASE_00180	RNaseP_bact_a links to Rfam database...	0.56	0.54	0.58	54	51267	46	3	36	7	46
ASE_00181	RNaseP_bact_a links to Rfam database...	0.60	0.59	0.61	63	57527	46	3	37	6	43
ASE_00182	RNaseP_bact_a links to Rfam database...	0.57	0.55	0.59	75	84128	55	5	47	3	61
ASE_00184	RNaseP_bact_a links to Rfam database...	0.70	0.70	0.70	71	54514	34	2	28	4	31
ASE_00185	RNaseP_bact_a links to Rfam database...	0.77	0.73	0.82	94	73421	27	1	20	6	34
ASE_00186	RNaseP_bact_a links to Rfam database...	0.68	0.67	0.69	88	78876	45	3	36	6	44
ASE_00187	RNaseP_arch links to Rfam database...	0.30	0.30	0.31	34	68524	84	7	70	7	81
ASE_00189	RNaseP_bact_b links to Rfam database...	0.61	0.60	0.63	61	63093	41	5	31	5	41
ASE_00190	RNaseP_bact_b links to Rfam database...	0.59	0.57	0.62	51	45369	38	3	28	7	39
ASE_00191	RNaseP_arch links to Rfam database...	0.68	0.67	0.68	41	29586	29	1	18	10	20
ASE_00192	RNaseP_bact_b links to Rfam database...	0.52	0.50	0.55	66	84545	59	8	47	4	67
ASE_00194	RNaseP_bact_b links to Rfam database...	0.46	0.45	0.47	54	73422	64	8	52	4	65
ASE_00196	RNaseP_arch links to Rfam database...	0.80	0.79	0.81	59	31553	21	2	12	7	16
ASE_00197	RNaseP_bact_a links to Rfam database...	0.59	0.57	0.63	82	89122	60	3	46	11	63
ASE_00198	RNaseP_bact_a links to Rfam database...	0.78	0.73	0.83	74	52561	21	2	13	6	28
ASE_00203	RNaseP_bact_a links to Rfam database...	0.72	0.71	0.73	68	46572	31	4	21	6	28
ASE_00204	RNaseP_bact_b links to Rfam database...	0.68	0.66	0.70	74	67790	37	7	25	5	38
ASE_00205	RNaseP_arch links to Rfam database...	0.44	0.46	0.44	41	45962	56	8	45	3	49
ASE_00209	RNaseP_arch links to Rfam database...	0.40	0.39	0.41	34	42989	49	4	44	1	54
ASE_00210	RNaseP_arch links to Rfam database...	0.65	0.66	0.64	43	27194	25	6	18	1	22
ASE_00212	RNaseP_bact_a links to Rfam database...	0.59	0.57	0.60	85	93820	64	3	53	8	63
ASE_00213	RNaseP_arch links to Rfam database...	0.74	0.73	0.76	48	27198	16	3	12	1	18
ASE_00214	RNaseP_bact_a links to Rfam database...	0.75	0.74	0.76	76	56180	34	3	21	10	27
ASE_00215	RNaseP_bact_a links to Rfam database...	0.60	0.58	0.62	57	48424	39	5	30	4	42
ASE_00216	RNaseP_bact_a links to Rfam database...	0.27	0.28	0.26	23	39252	66	12	53	1	59
ASE_00217	RNaseP_bact_a links to Rfam database...	0.31	0.30	0.33	27	40388	63	4	51	8	63
ASE_00221	RNaseP_bact_a links to Rfam database...	0.55	0.52	0.59	61	64517	46	2	40	4	56
ASE_00222	RNaseP_arch links to Rfam database...	0.53	0.52	0.54	81	111950	70	8	62	0	76
ASE_00227	RNaseP_bact_a links to Rfam database...	0.51	0.49	0.54	65	78883	55	7	48	0	68
ASE_00228	RNaseP_bact_a links to Rfam database...	0.52	0.53	0.52	46	46882	47	13	30	4	40
ASE_00229	RNaseP_bact_a links to Rfam database...	0.72	0.70	0.73	61	42403	29	1	21	7	26
ASE_00231	RNaseP_bact_a links to Rfam database...	0.45	0.45	0.46	43	47801	56	2	49	5	53
ASE_00232	RNaseP_bact_a links to Rfam database...	0.66	0.67	0.65	56	38417	33	10	20	3	28
ASE_00234	RNaseP_bact_a links to Rfam database...	0.54	0.50	0.58	65	75353	53	4	44	5	64
ASE_00237	RNaseP_nuc links to Rfam database...	0.00	0.00	0.00	0	45679	96	25	49	22	56
ASE_00238	RNaseP_bact_a links to Rfam database...	0.68	0.65	0.71	74	64157	36	2	28	6	40
ASE_00240	RNaseP_bact_a links to Rfam database...	0.56	0.56	0.57	52	46574	45	1	38	6	41
ASE_00241	RNaseP_bact_a links to Rfam database...	0.69	0.69	0.68	60	43868	31	2	26	3	27
ASE_00242	RNaseP_bact_a links to Rfam database...	0.49	0.48	0.50	54	60968	55	1	52	2	58
ASE_00245	RNaseP_nuc links to Rfam database...	0.89	0.85	0.93	66	55207	38	0	5	33	12
ASE_00246	RNaseP_nuc links to Rfam database...	0.17	0.19	0.15	13	48121	88	17	54	17	54
ASE_00247	RNaseP_nuc links to Rfam database...	0.43	0.45	0.41	29	54215	82	8	33	41	35
ASE_00248	RNaseP_bact_a links to Rfam database...	0.38	0.35	0.40	40	62382	61	4	55	2	74
ASE_00250	RNaseP_bact_a links to Rfam database...	0.68	0.66	0.71	87	78880	40	3	33	4	44
ASE_00251	RNaseP_nuc links to Rfam database...	1.00	1.00	1.00	43	17723	22	0	0	22	0
ASE_00252	RNaseP_bact_a links to Rfam database...	0.59	0.57	0.63	95	115288	67	2	55	10	73
ASE_00254	RNaseP_bact_a links to Rfam database...	0.29	0.29	0.30	24	36776	61	5	51	5	58
ASE_00255	RNaseP_bact_a links to Rfam database...	0.51	0.50	0.52	65	74567	61	4	55	2	65
ASE_00257	RNaseP_bact_a links to Rfam database...	0.49	0.47	0.50	46	50948	50	2	44	4	51
ASE_00258	RNaseP_nuc links to Rfam database...	0.65	0.65	0.65	35	26742	32	0	19	13	19
ASE_00259	RNaseP_bact_a links to Rfam database...	0.42	0.40	0.45	48	73046	62	4	55	3	73
ASE_00263	RNaseP_bact_a links to Rfam database...	0.57	0.58	0.58	69	70380	54	5	46	3	51
ASE_00264	RNaseP_nuc links to Rfam database...	0.84	0.80	0.89	80	49051	25	1	9	15	20
ASE_00267	RNaseP_bact_a links to Rfam database...	0.65	0.63	0.68	55	45069	36	2	24	10	33
ASE_00270	RNaseP_bact_a links to Rfam database...	0.82	0.79	0.85	101	72271	24	1	17	6	27
ASE_00274	RNaseP_bact_a links to Rfam database...	0.42	0.41	0.43	42	55514	57	7	48	2	61
ASE_00277	RNaseP_bact_a links to Rfam database...	0.42	0.43	0.41	39	48110	59	9	47	3	52
ASE_00279	RNaseP_bact_a links to Rfam database...	0.49	0.48	0.51	48	53207	49	7	39	3	53
ASE_00280	RNaseP_bact_a links to Rfam database...	0.52	0.50	0.53	49	51911	47	8	35	4	49
ASE_00281	RNaseP_bact_a links to Rfam database...	0.79	0.75	0.83	66	44471	23	0	14	9	22
ASE_00282	RNaseP_bact_a links to Rfam database...	0.44	0.44	0.44	56	77688	71	4	67	0	71
ASE_00283	RNaseP_bact_a links to Rfam database...	0.71	0.68	0.74	73	61677	34	3	23	8	34
ASE_00284	RNaseP_bact_a links to Rfam database...	0.68	0.66	0.71	71	58211	37	4	25	8	37
ASE_00285	RNaseP_bact_a links to Rfam database...	0.81	0.76	0.86	93	68898	25	2	13	10	29
ASE_00286	RNaseP_bact_a links to Rfam database...	0.39	0.38	0.40	35	46577	63	2	51	10	57
ASE_00287	RNaseP_bact_a links to Rfam database...	0.71	0.68	0.74	70	54851	31	5	20	6	33
ASE_00288	RNaseP_bact_a links to Rfam database...	0.31	0.31	0.31	29	45963	66	7	57	2	64
ASE_00289	RNaseP_bact_a links to Rfam database...	0.64	0.62	0.67	97	100880	52	3	45	4	60
ASE_00292	RNaseP_bact_a links to Rfam database...	0.44	0.42	0.46	58	81685	71	2	65	4	80
ASE_00294	RNaseP_bact_a links to Rfam database...	0.60	0.56	0.64	96	114332	57	3	50	4	75
ASE_00295	RNaseP_bact_a links to Rfam database...	0.57	0.52	0.62	68	73810	45	4	38	3	63
ASE_00296	RNaseP_bact_a links to Rfam database...	0.42	0.41	0.44	59	91673	77	9	65	3	86
ASE_00297	RNaseP_bact_a links to Rfam database...	0.48	0.50	0.47	49	52871	56	8	47	1	49
ASE_00298	RNaseP_bact_a links to Rfam database...	0.52	0.50	0.54	56	67425	51	1	46	4	57
ASE_00299	RNaseP_bact_a links to Rfam database...	0.59	0.56	0.62	56	49365	41	1	33	7	44
ASE_00303	RNaseP_nuc links to Rfam database...	0.59	0.62	0.56	59	67790	58	7	40	11	36
ASE_00305	RNaseP_bact_b links to Rfam database...	0.55	0.53	0.56	45	54535	48	4	31	13	40
ASE_00313	RNaseP_nuc links to Rfam database...	0.68	0.70	0.67	62	62389	53	5	25	23	27
ASE_00316	RNaseP_nuc links to Rfam database...	0.66	0.64	0.67	63	107786	82	7	24	51	35
ASE_00318	RNaseP_bact_b links to Rfam database...	0.64	0.64	0.65	75	80084	46	11	30	5	43
ASE_00321	RNaseP_bact_b links to Rfam database...	0.39	0.40	0.39	35	54526	58	11	43	4	53
ASE_00327	RNaseP_nuc links to Rfam database...	0.70	0.71	0.70	63	57201	43	9	18	16	26
ASE_00328	RNaseP_bact_b links to Rfam database...	0.68	0.65	0.72	73	72669	43	4	25	14	39
ASE_00329	RNaseP_nuc links to Rfam database...	0.66	0.71	0.62	45	40682	51	8	20	23	18
ASE_00330	RNaseP_nuc links to Rfam database...	0.66	0.68	0.65	61	56186	52	6	27	19	29
ASE_00332	RNaseP_bact_a links to Rfam database...	0.48	0.46	0.50	64	81683	66	2	61	3	74
ASE_00335	RNaseP_bact_b links to Rfam database...	0.39	0.39	0.40	45	75353	75	9	59	7	71
ASE_00337	RNaseP_nuc links to Rfam database...	0.39	0.41	0.38	29	39263	60	5	43	12	42
ASE_00338	RNaseP_nuc links to Rfam database...	0.56	0.56	0.57	55	66333	55	4	38	13	43
ASE_00339	RNaseP_bact_a links to Rfam database...	0.54	0.53	0.55	63	80085	63	5	47	11	56
ASE_00340	RNaseP_bact_a links to Rfam database...	0.75	0.74	0.76	63	45973	27	6	14	7	22
ASE_00342	RNaseP_bact_a links to Rfam database...	0.62	0.58	0.67	67	62381	34	1	32	1	48
ASE_00343	RNaseP_bact_a links to Rfam database...	0.68	0.68	0.69	77	83324	51	8	27	16	36
ASE_00346	RNaseP_arch links to Rfam database...	0.53	0.53	0.54	51	48110	52	4	40	8	46
ASE_00353	RNaseP_bact_a links to Rfam database...	0.56	0.56	0.56	60	57863	51	4	43	4	47
ASE_00359	RNaseP_arch links to Rfam database...	0.09	0.10	0.09	8	42688	82	9	73	0	72
ASE_00360	RNaseP_arch links to Rfam database...	0.31	0.31	0.31	20	29339	50	11	33	6	45
ASE_00361	RNaseP_bact_a links to Rfam database...	0.52	0.51	0.53	65	75343	61	11	47	3	62
ASE_00362	RNaseP_bact_a links to Rfam database...	0.59	0.59	0.59	54	48114	40	2	35	3	37
ASE_00363	RNaseP_bact_a links to Rfam database...	0.55	0.55	0.55	52	51266	49	3	39	7	42
ASE_00364	RNaseP_bact_a links to Rfam database...	0.74	0.72	0.76	76	54185	32	1	23	8	29
ASE_00366	RNaseP_bact_a links to Rfam database...	0.41	0.42	0.40	41	58550	63	10	52	1	57
ASE_00367	RNaseP_bact_a links to Rfam database...	0.50	0.52	0.48	45	42977	52	4	45	3	41
ASE_00369	RNaseP_bact_a links to Rfam database...	0.61	0.61	0.61	65	55839	45	2	39	4	42
ASE_00370	RNaseP_bact_a links to Rfam database...	0.54	0.55	0.53	46	41818	45	5	36	4	38
ASE_00372	RNaseP_bact_a links to Rfam database...	0.69	0.69	0.70	69	51904	36	6	24	6	31
ASE_00374	RNaseP_bact_a links to Rfam database...	0.68	0.67	0.69	59	44765	28	3	23	2	29
ASE_00375	RNaseP_bact_a links to Rfam database...	0.79	0.75	0.85	82	60281	21	0	15	6	28
ASE_00376	RNaseP_bact_a links to Rfam database...	0.60	0.59	0.61	62	56852	47	1	38	8	43
ASE_00377	RNaseP_bact_a links to Rfam database...	0.72	0.70	0.74	75	57528	33	3	24	6	32
ASE_00379	RNaseP_bact_a links to Rfam database...	0.48	0.47	0.49	42	45971	53	3	40	10	47
ASE_00380	RNaseP_bact_a links to Rfam database...	0.61	0.59	0.64	58	54855	38	6	27	5	41
ASE_00382	RNaseP_bact_a links to Rfam database...	0.67	0.67	0.68	56	41823	31	6	20	5	28
ASE_00383	RNaseP_bact_a links to Rfam database...	0.43	0.42	0.44	44	54516	62	5	50	7	61
ASE_00384	RNaseP_bact_a links to Rfam database...	0.58	0.58	0.58	53	48425	40	3	35	2	39
ASE_00385	RNaseP_bact_a links to Rfam database...	0.49	0.49	0.49	40	41824	46	5	36	5	41
ASE_00386	RNaseP_bact_a links to Rfam database...	0.51	0.51	0.51	49	50307	49	7	40	2	47
ASE_00387	RNaseP_bact_a links to Rfam database...	0.58	0.56	0.60	58	55848	44	6	33	5	46
ASE_00388	RNaseP_bact_a links to Rfam database...	0.59	0.56	0.63	50	45673	41	2	28	11	39
ASE_00390	RNaseP_bact_a links to Rfam database...	0.62	0.60	0.64	51	42115	39	0	29	10	34
ASE_00393	RNaseP_bact_a links to Rfam database...	0.49	0.47	0.51	44	47808	50	2	41	7	49
ASE_00394	RNaseP_bact_a links to Rfam database...	0.77	0.75	0.79	70	46882	24	2	17	5	23
ASE_00395	RNaseP_bact_a links to Rfam database...	0.64	0.65	0.63	55	41528	37	3	30	4	29
ASE_00396	RNaseP_bact_a links to Rfam database...	0.53	0.53	0.53	44	41533	43	4	35	4	39
ASE_00397	RNaseP_bact_a links to Rfam database...	0.75	0.72	0.78	76	54518	29	2	19	8	29
ASE_00398	RNaseP_bact_a links to Rfam database...	0.61	0.58	0.64	60	55851	43	1	33	9	44
ASE_00400	RNaseP_bact_a links to Rfam database...	0.64	0.62	0.67	66	57871	38	1	32	5	40
ASE_00401	RNaseP_bact_a links to Rfam database...	0.59	0.60	0.59	75	76901	53	7	45	1	51
ASE_00402	RNaseP_bact_a links to Rfam database...	0.76	0.74	0.79	63	42406	22	2	15	5	22
ASE_00403	RNaseP_bact_a links to Rfam database...	0.67	0.64	0.70	68	55848	34	0	29	5	39
ASE_00404	RNaseP_bact_a links to Rfam database...	0.42	0.41	0.44	35	42991	54	1	44	9	50
ASE_00406	RNaseP_bact_a links to Rfam database...	0.80	0.77	0.83	72	48741	25	1	14	10	22
ASE_00411	RNaseP_bact_a links to Rfam database...	0.47	0.46	0.48	41	49370	53	5	39	9	48
ASE_00412	RNaseP_bact_a links to Rfam database...	0.46	0.46	0.47	48	58209	57	9	45	3	57
ASE_00413	RNaseP_bact_a links to Rfam database...	0.55	0.58	0.53	47	44462	45	13	29	3	34
ASE_00414	RNaseP_bact_a links to Rfam database...	0.46	0.45	0.47	43	46269	55	4	44	7	52
ASE_00415	RNaseP_bact_a links to Rfam database...	0.66	0.65	0.66	67	54845	36	6	28	2	36
ASE_00416	RNaseP_bact_a links to Rfam database...	0.64	0.62	0.66	79	77301	49	3	38	8	48
ASE_00417	RNaseP_arch links to Rfam database...	0.35	0.36	0.35	36	54511	70	9	59	2	64
ASE_00418	RNaseP_arch links to Rfam database...	0.20	0.21	0.20	16	38701	67	9	55	3	59
ASE_00419	RNaseP_bact_a links to Rfam database...	0.74	0.74	0.75	76	54845	27	9	16	2	27
ASE_00420	RNaseP_nuc links to Rfam database...	0.73	0.75	0.72	47	43300	44	6	12	26	16
ASE_00422	RNaseP_bact_a links to Rfam database...	0.78	0.77	0.79	72	46880	26	5	14	7	22
ASE_00423	RNaseP_bact_a links to Rfam database...	0.58	0.58	0.59	63	56846	44	7	37	0	46
ASE_00426	RNaseP_bact_a links to Rfam database...	0.42	0.42	0.42	45	60969	61	5	56	0	63
ASE_00427	RNaseP_nuc links to Rfam database...	0.16	0.20	0.14	9	40691	80	18	37	25	37
ASE_00428	RNaseP_bact_a links to Rfam database...	0.77	0.74	0.80	93	76520	29	3	20	6	32
ASE_00430	RNaseP_bact_a links to Rfam database...	0.71	0.70	0.72	68	46877	33	5	21	7	29
ASE_00431	RNaseP_bact_a links to Rfam database...	0.36	0.35	0.38	33	46272	59	6	49	4	62
ASE_00434	RNaseP_bact_b links to Rfam database...	0.62	0.60	0.63	66	68161	46	5	33	8	44
ASE_00437	RNaseP_bact_a links to Rfam database...	0.44	0.41	0.47	56	79281	68	0	64	4	79
ASE_00438	RNaseP_bact_a links to Rfam database...	0.49	0.47	0.50	55	65957	54	4	50	0	61
ASE_00441	RNaseP_bact_a links to Rfam database...	0.81	0.77	0.86	86	64161	24	1	13	10	26
ASE_00443	RNaseP_nuc links to Rfam database...	0.96	0.92	1.00	46	26750	31	0	0	31	4
ASE_00447	RNaseP_bact_a links to Rfam database...	0.68	0.63	0.73	73	60278	33	1	26	6	43
ASE_00448	RNaseP_bact_a links to Rfam database...	0.23	0.23	0.23	26	64147	95	8	80	7	86
ASE_00451	RNaseP_bact_a links to Rfam database...	0.64	0.61	0.67	76	70762	43	3	35	5	49
ASE_00454	RNaseP_nuc links to Rfam database...	0.53	0.54	0.52	34	43299	58	1	31	26	29
CRW_00013	Intron_gpI links to Rfam database...	0.21	0.21	0.21	24	103627	115	11	78	26	91
CRW_00016	Intron_gpI links to Rfam database...	0.79	0.75	0.83	90	77313	31	5	13	13	30
CRW_00024	SSU_rRNA_archaea links to Rfam database...	0.56	0.57	0.56	259	1085140	238	22	180	36	199
CRW_00048	SSU_rRNA_bacteria links to Rfam database...	0.51	0.51	0.52	239	1170753	241	24	199	18	231
CRW_00054	SSU_rRNA_bacteria links to Rfam database...	0.40	0.41	0.40	185	1107355	286	30	246	10	271
CRW_00059	SSU_rRNA_bacteria links to Rfam database...	0.44	0.44	0.44	207	1172278	279	31	230	18	266
CRW_00061	SSU_rRNA_bacteria links to Rfam database...	0.54	0.54	0.54	259	1181475	236	33	186	17	217
CRW_00068	SSU_rRNA_bacteria links to Rfam database...	0.43	0.43	0.43	198	1108845	279	32	230	17	259
CRW_00096	SSU_rRNA_bacteria links to Rfam database...	0.42	0.43	0.42	200	1178403	299	28	249	22	265
CRW_00140	SSU_rRNA_bacteria links to Rfam database...	0.38	0.38	0.38	176	1135818	299	27	257	15	287
CRW_00141	SSU_rRNA_bacteria links to Rfam database...	0.53	0.53	0.54	253	1201553	246	34	185	27	223
CRW_00150	SSU_rRNA_bacteria links to Rfam database...	0.45	0.44	0.45	204	1152472	262	26	219	17	262
CRW_00152	SSU_rRNA_bacteria links to Rfam database...	0.53	0.52	0.54	246	1179962	231	33	175	23	225
CRW_00166	SSU_rRNA_bacteria links to Rfam database...	0.40	0.40	0.39	188	1190720	309	32	256	21	280
CRW_00173	SSU_rRNA_bacteria links to Rfam database...	0.28	0.28	0.28	125	1082214	333	31	286	16	320
CRW_00177	SSU_rRNA_bacteria links to Rfam database...	0.49	0.48	0.50	226	1178426	251	26	202	23	247
CRW_00196	SSU_rRNA_bacteria links to Rfam database...	0.45	0.46	0.44	219	1207740	296	42	234	20	256
CRW_00230	SSU_rRNA_bacteria links to Rfam database...	0.53	0.52	0.54	247	1198465	241	32	182	27	231
CRW_00245	SSU_rRNA_bacteria links to Rfam database...	0.37	0.37	0.37	167	1105882	297	32	247	18	286
CRW_00248	SSU_rRNA_bacteria links to Rfam database...	0.49	0.49	0.48	238	1218645	286	36	222	28	246
CRW_00250	SSU_rRNA_bacteria links to Rfam database...	0.37	0.38	0.37	181	1198432	321	48	265	8	297
CRW_00256	SSU_rRNA_bacteria links to Rfam database...	0.39	0.39	0.40	183	1192281	294	41	235	18	285
CRW_00270	SSU_rRNA_bacteria links to Rfam database...	0.54	0.54	0.54	245	1111832	232	27	182	23	210
CRW_00271	SSU_rRNA_bacteria links to Rfam database...	0.36	0.36	0.37	168	1122293	309	37	253	19	294
CRW_00273	SSU_rRNA_bacteria links to Rfam database...	0.52	0.52	0.52	233	1085151	238	41	176	21	213
CRW_00275	SSU_rRNA_bacteria links to Rfam database...	0.59	0.59	0.59	271	1114809	212	28	163	21	186
CRW_00277	SSU_rRNA_bacteria links to Rfam database...	0.32	0.32	0.32	144	1110348	313	38	265	10	309
CRW_00280	SSU_rRNA_bacteria links to Rfam database...	0.33	0.33	0.32	151	1117794	327	43	272	12	302
CRW_00281	SSU_rRNA_bacteria links to Rfam database...	0.53	0.52	0.53	243	1144885	238	27	186	25	221
CRW_00283	SSU_rRNA_bacteria links to Rfam database...	0.32	0.32	0.33	140	1015595	312	49	241	22	292
CRW_00289	SSU_rRNA_bacteria links to Rfam database...	0.51	0.50	0.52	237	1189193	251	38	185	28	239
CRW_00292	SSU_rRNA_bacteria links to Rfam database...	0.41	0.39	0.42	181	1123819	271	41	209	21	280
CRW_00306	SSU_rRNA_eukarya links to Rfam database...	0.09	0.09	0.08	43	1445337	532	80	390	62	419
CRW_00366	SSU_rRNA_eukarya links to Rfam database...	0.27	0.29	0.25	138	1579211	437	87	317	33	344
CRW_00371	SSU_rRNA_eukarya links to Rfam database...	0.34	0.35	0.33	173	1611383	414	61	293	60	323
CRW_00379	SSU_rRNA_eukarya links to Rfam database...	0.44	0.45	0.44	241	2126401	411	60	251	100	293
CRW_00411	SSU_rRNA_eukarya links to Rfam database...	0.35	0.36	0.34	177	1614982	392	60	284	48	319
CRW_00414	SSU_rRNA_eukarya links to Rfam database...	0.29	0.31	0.28	152	1665688	448	68	317	63	343
CRW_00466	SSU_rRNA_bacteria links to Rfam database...	0.57	0.56	0.57	257	1116315	221	28	165	28	201
CRW_00589	SSU_rRNA_bacteria links to Rfam database...	0.30	0.30	0.31	133	1094029	317	35	263	19	312
CRW_00590	SSU_rRNA_bacteria links to Rfam database...	0.42	0.42	0.42	191	1119306	279	34	225	20	261
CRW_00591	SSU_rRNA_bacteria links to Rfam database...	0.50	0.50	0.50	222	1098458	256	20	203	33	224
CRW_00610	Intron_gpI links to Rfam database...	0.43	0.43	0.42	35	36232	49	9	39	1	46
CRW_00613	Intron_gpI links to Rfam database...	0.89	0.85	0.93	66	34909	13	0	5	8	12
CRW_00614	Intron_gpI links to Rfam database...	0.13	0.16	0.11	9	121688	143	18	56	69	48
CRW_00618	Intron_gpI links to Rfam database...	0.19	0.20	0.18	12	56212	81	8	48	25	49
CRW_00619	Intron_gpI links to Rfam database...	0.36	0.37	0.34	27	164946	145	7	45	93	46
CRW_00620	Intron_gpI links to Rfam database...	0.26	0.30	0.23	19	150891	164	18	47	99	44
CRW_00621	Intron_gpI links to Rfam database...	0.41	0.41	0.42	29	153112	137	9	31	97	42
CRW_00623	Intron_gpI links to Rfam database...	0.19	0.19	0.20	16	129714	133	15	50	68	67
CRW_00633	Intron_gpI links to Rfam database...	0.44	0.43	0.44	46	63441	61	13	46	2	60
CRW_00634	Intron_gpI links to Rfam database...	0.28	0.30	0.26	28	64513	83	12	67	4	66
CRW_00670	Intron_gpI links to Rfam database...	0.54	0.55	0.54	66	70002	59	12	45	2	54
CRW_00671	Intron_gpI links to Rfam database...	0.71	0.68	0.74	79	62728	34	1	27	6	38
CRW_00672	Intron_gpI links to Rfam database...	0.75	0.77	0.74	85	72275	40	6	24	10	26
CRW_00674	Intron_gpI links to Rfam database...	0.66	0.67	0.66	83	83310	52	9	34	9	41
CRW_00676	Intron_gpI links to Rfam database...	0.55	0.57	0.54	66	93405	75	12	45	18	49
CRW_00692	Intron_gpI links to Rfam database...	0.23	0.24	0.21	22	68530	90	27	56	7	68
CRW_00759	SSU_rRNA_eukarya links to Rfam database...	0.31	0.32	0.29	156	1636612	443	67	310	66	325
CRW_00763	SSU_rRNA_bacteria links to Rfam database...	0.20	0.20	0.20	90	1215568	391	45	317	29	356
CRW_00778	SSU_rRNA_bacteria links to Rfam database...	0.27	0.28	0.26	107	1201617	345	45	256	44	277
CRW_00789	SSU_rRNA_bacteria links to Rfam database...	0.39	0.38	0.39	172	1137342	303	31	241	31	275
CRW_00795	SSU_rRNA_bacteria links to Rfam database...	0.32	0.33	0.30	130	1152494	342	43	254	45	264
CRW_00849	SSU_rRNA_bacteria links to Rfam database...	0.53	0.53	0.52	250	1117779	255	29	202	24	220
CRW_00997	SSU_rRNA_bacteria links to Rfam database...	0.37	0.38	0.37	175	1135806	315	41	256	18	289
CRW_01153	SSU_rRNA_eukarya links to Rfam database...	0.36	0.37	0.35	187	1605990	391	60	291	40	316
CRW_01171	SSU_rRNA_eukarya links to Rfam database...	0.28	0.28	0.27	143	1593476	430	75	311	44	363
CRW_01343	SSU_rRNA_archaea links to Rfam database...	0.37	0.36	0.38	158	977486	272	36	221	15	276
PDB_00005	Tymo_tRNA-like links to Rfam database...	0.88	0.79	1.00	11	935	0	0	0	0	3
PDB_00012	mir-TAR links to Rfam database...	1.00	1.00	1.00	7	399	3	0	0	3	0
PDB_00213	Gammaretro_CES links to Rfam database...	0.87	0.80	0.94	33	5015	2	0	2	0	8
PDB_00553	mir-TAR links to Rfam database...	1.00	1.00	1.00	11	454	0	0	0	0	0
PDB_00703	SSU_rRNA_bacteria links to Rfam database...	0.48	0.46	0.50	229	1073385	256	28	203	25	266
PDB_00716	HDV_ribozyme links to Rfam database...	-0.01	0.00	0.00	0	2678	24	1	22	1	23
PDB_00741	Entero_5_CRE links to Rfam database...	0.87	0.76	1.00	13	690	0	0	0	0	4
PDB_00810	s2m links to Rfam database...	0.91	0.82	1.00	14	1067	0	0	0	0	3
PDB_00827	Intron_gpI links to Rfam database...	0.65	0.59	0.72	48	26961	21	0	19	2	33
PDB_00828	Purine links to Rfam database...	0.88	0.78	1.00	21	2464	0	0	0	0	6
PDB_00829	Purine links to Rfam database...	0.86	0.75	1.00	18	2260	0	0	0	0	6
PDB_00854	SSU_rRNA_bacteria links to Rfam database...	0.46	0.46	0.46	246	1500244	334	36	252	46	289
PDB_00876	HIV_FE links to Rfam database...	0.97	0.95	1.00	19	971	0	0	0	0	1
PDB_00919	RNaseP_bact_a links to Rfam database...	0.52	0.48	0.56	49	44166	42	4	34	4	54
PDB_01001	tRNA links to Rfam database...	0.52	0.56	0.50	10	2125	10	3	7	0	8
PDB_01020	Purine links to Rfam database...	0.86	0.74	1.00	17	2261	1	0	0	1	6
PDB_01050	UnaL2 links to Rfam database...	0.92	0.85	1.00	11	619	2	0	0	2	2
PDB_01051	Telomerase-cil links to Rfam database...	0.96	0.92	1.00	12	891	4	0	0	4	1
PDB_01073	SAM links to Rfam database...	0.86	0.74	1.00	25	4346	1	0	0	1	9
PDB_01088	SSU_rRNA_bacteria links to Rfam database...	0.34	0.33	0.34	180	1470946	368	36	308	24	367
PDB_01092	glmS links to Rfam database...	0.73	0.63	0.85	33	10114	8	0	6	2	19
PDB_01103	SSU_rRNA_bacteria links to Rfam database...	0.44	0.44	0.44	245	1605966	343	42	275	26	317
PDB_01105	SSU_rRNA_bacteria links to Rfam database...	0.46	0.45	0.47	245	1433450	306	32	244	30	295
PDB_01114	TPP links to Rfam database...	0.42	0.37	0.48	10	2829	11	1	10	0	17
PDB_01120	SSU_rRNA_bacteria links to Rfam database...	0.31	0.30	0.33	158	1204643	339	37	290	12	369
PDB_01152	HIV_FS2 links to Rfam database...	0.88	0.79	1.00	11	550	0	0	0	0	3
PDB_01236	ykoK links to Rfam database...	0.73	0.69	0.77	37	11580	14	0	11	3	17
PDB_01273	SSU_rRNA_bacteria links to Rfam database...	0.38	0.38	0.39	186	1117784	320	28	262	30	305
RFA_00389	Hammerhead_3 links to Rfam database...	1.00	1.00	1.00	15	1416	2	0	0	2	0
RFA_00390	Hammerhead_3 links to Rfam database...	1.00	1.00	1.00	15	1416	2	0	0	2	0
RFA_00391	Hammerhead_3 links to Rfam database...	0.50	0.47	0.54	7	1418	7	1	5	1	8
RFA_00396	Hammerhead_3 links to Rfam database...	0.97	0.93	1.00	14	1417	2	0	0	2	1
RFA_00402	Hammerhead_3 links to Rfam database...	0.33	0.33	0.33	5	1416	11	0	10	1	10
RFA_00409	Hammerhead_3 links to Rfam database...	0.55	0.53	0.57	8	1417	7	1	5	1	7
RFA_00416	Hammerhead_3 links to Rfam database...	0.93	0.93	0.93	14	1470	4	0	1	3	1
RFA_00425	Hammerhead_3 links to Rfam database...	0.93	0.87	1.00	13	1640	4	0	0	4	2
RFA_00427	Hammerhead_3 links to Rfam database...	0.97	0.93	1.00	14	1471	2	0	0	2	1
RFA_00433	Hammerhead_3 links to Rfam database...	1.00	1.00	1.00	15	1416	2	0	0	2	0
RFA_00434	Hammerhead_3 links to Rfam database...	1.00	1.00	1.00	15	1416	2	0	0	2	0
RFA_00436	Hammerhead_3 links to Rfam database...	1.00	1.00	1.00	15	1416	2	0	0	2	0
RFA_00440	Hammerhead_3 links to Rfam database...	1.00	1.00	1.00	15	1470	2	0	0	2	0
RFA_00442	Hammerhead_3 links to Rfam database...	1.00	1.00	1.00	15	1416	2	0	0	2	0
RFA_00444	Hammerhead_3 links to Rfam database...	1.00	1.00	1.00	15	1525	1	0	0	1	0
RFA_00446	Hammerhead_3 links to Rfam database...	0.97	0.93	1.00	14	1471	2	0	0	2	1
RFA_00449	Hammerhead_3 links to Rfam database...	0.64	0.60	0.69	9	1472	6	1	3	2	6
RFA_00582	Y_RNA links to Rfam database...	1.00	1.00	1.00	15	5980	21	0	0	21	0
RFA_00583	Y_RNA links to Rfam database...	0.51	0.53	0.50	8	4934	23	0	8	15	7
RFA_00584	Y_RNA links to Rfam database...	0.87	0.87	0.87	13	2911	14	0	2	12	2
RFA_00585	Y_RNA links to Rfam database...	1.00	1.00	1.00	15	4836	14	0	0	14	0
RFA_00586	Y_RNA links to Rfam database...	0.97	0.93	1.00	14	3902	12	0	0	12	1
RFA_00587	Y_RNA links to Rfam database...	1.00	1.00	1.00	15	4836	11	0	0	11	0
RFA_00588	Y_RNA links to Rfam database...	1.00	1.00	1.00	15	4545	15	0	0	15	0
RFA_00589	Y_RNA links to Rfam database...	1.00	1.00	1.00	15	4356	17	0	0	17	0
RFA_00594	Y_RNA links to Rfam database...	0.90	0.87	0.93	13	2761	13	0	1	12	2
RFA_00596	Y_RNA links to Rfam database...	0.00	0.00	0.00	0	5981	26	4	10	12	15
RFA_00597	Telomerase-vert links to Rfam database...	0.27	0.29	0.26	32	97779	107	18	74	15	77
RFA_00598	Telomerase-vert links to Rfam database...	0.69	0.66	0.71	67	84572	57	4	23	30	34
RFA_00599	Telomerase-vert links to Rfam database...	0.73	0.74	0.72	82	101361	60	10	22	28	29
RFA_00600	Telomerase-vert links to Rfam database...	0.63	0.71	0.56	71	120169	87	30	25	32	29
RFA_00601	Telomerase-vert links to Rfam database...	0.42	0.46	0.39	52	99103	95	33	47	15	62
RFA_00602	Telomerase-vert links to Rfam database...	0.60	0.63	0.57	73	101347	77	23	32	22	43
RFA_00603	Telomerase-cil links to Rfam database...	0.69	0.74	0.63	26	13489	18	4	11	3	9
RFA_00604	Telomerase-cil links to Rfam database...	0.70	0.71	0.69	25	13494	22	2	9	11	10
RFA_00605	Telomerase-cil links to Rfam database...	0.36	0.34	0.38	12	15193	29	3	17	9	23
RFA_00606	Telomerase-cil links to Rfam database...	0.68	0.67	0.70	26	21284	27	7	4	16	13
RFA_00607	Telomerase-cil links to Rfam database...	0.78	0.83	0.73	30	17725	21	5	6	10	6
RFA_00609	Telomerase-cil links to Rfam database...	0.52	0.57	0.48	21	17911	32	4	19	9	16
RFA_00610	Telomerase-cil links to Rfam database...	0.87	0.84	0.91	31	17171	17	0	3	14	6
RFA_00611	Telomerase-cil links to Rfam database...	0.84	0.83	0.85	29	13007	13	0	5	8	6
RFA_00613	Telomerase-cil links to Rfam database...	0.73	0.69	0.77	24	12849	13	4	3	6	11
RFA_00615	Telomerase-cil links to Rfam database...	0.66	0.69	0.63	24	13328	18	5	9	4	11
RFA_00620	Telomerase-cil links to Rfam database...	0.47	0.49	0.45	19	21903	36	7	16	13	20
RFA_00621	RNase_MRP links to Rfam database...	0.38	0.38	0.39	29	46285	63	3	43	17	47
RFA_00623	RNase_MRP links to Rfam database...	0.47	0.46	0.48	36	43881	52	3	36	13	42
RFA_00624	RNase_MRP links to Rfam database...	0.44	0.48	0.41	29	30065	48	6	35	7	32
RFA_00626	rne5 links to Rfam database...	0.86	0.82	0.90	71	56537	35	2	6	27	16
RFA_00627	rne5 links to Rfam database...	0.68	0.67	0.69	58	56869	42	7	19	16	29
RFA_00628	rne5 links to Rfam database...	0.87	0.84	0.90	72	57211	30	0	8	22	14
RFA_00630	rne5 links to Rfam database...	0.62	0.63	0.61	55	56863	52	9	26	17	32
RFA_00632	HDV_ribozyme links to Rfam database...	0.39	0.39	0.39	11	4067	17	2	15	0	17
RFA_00636	HDV_ribozyme links to Rfam database...	0.42	0.43	0.43	12	3977	16	2	14	0	16
RFA_00639	7SK links to Rfam database...	0.47	0.51	0.44	44	54516	64	15	40	9	43
RFA_00642	Vimentin3 links to Rfam database...	0.36	0.33	0.40	6	2911	9	2	7	0	12
RFA_00643	Vimentin3 links to Rfam database...	0.22	0.22	0.24	4	2194	14	2	11	1	14
RFA_00644	Vimentin3 links to Rfam database...	-0.01	0.00	0.00	0	2681	20	5	15	0	18
RFA_00645	Vimentin3 links to Rfam database...	-0.01	0.00	0.00	0	2402	13	2	11	0	18
RFA_00649	Vimentin3 links to Rfam database...	0.72	0.72	0.72	13	2127	7	1	4	2	5
RFA_00651	Vimentin3 links to Rfam database...	0.28	0.28	0.29	5	2063	13	0	12	1	13
RFA_00653	Vimentin3 links to Rfam database...	0.34	0.33	0.35	6	2128	11	2	9	0	12
RFA_00654	Vimentin3 links to Rfam database...	-0.01	0.00	0.00	0	2400	15	2	13	0	18
RFA_00658	Hammerhead_1 links to Rfam database...	0.59	0.50	0.70	7	1118	5	0	3	2	7
RFA_00659	Hammerhead_1 links to Rfam database...	-0.01	0.00	0.00	0	1120	10	1	7	2	14
RFA_00664	Hammerhead_1 links to Rfam database...	-0.01	0.00	0.00	0	980	11	0	10	1	14
RFA_00667	Hammerhead_1 links to Rfam database...	0.30	0.29	0.33	4	978	8	1	7	0	10
RFA_00668	Hammerhead_1 links to Rfam database...	0.41	0.43	0.40	6	975	9	0	9	0	8
RFA_00672	Hammerhead_1 links to Rfam database...	-0.01	0.00	0.00	0	897	6	0	6	0	13
RFA_00673	Hammerhead_1 links to Rfam database...	0.42	0.36	0.50	5	1118	6	0	5	1	9
RFA_00674	Hammerhead_1 links to Rfam database...	-0.01	0.00	0.00	0	1116	13	0	12	1	14
RFA_00675	Hammerhead_1 links to Rfam database...	-0.01	0.00	0.00	0	980	11	0	10	1	14
RFA_00677	Hammerhead_1 links to Rfam database...	0.42	0.43	0.43	6	976	9	0	8	1	8
RFA_00678	Hammerhead_1 links to Rfam database...	0.33	0.29	0.40	4	936	6	0	6	0	10
RFA_00680	Hammerhead_1 links to Rfam database...	0.74	0.71	0.77	10	1115	6	0	3	3	4
RFA_00684	Hammerhead_1 links to Rfam database...	0.66	0.64	0.69	9	977	5	0	4	1	5
RFA_00685	Hammerhead_1 links to Rfam database...	0.42	0.36	0.50	5	980	6	0	5	1	9
RFA_00695	Hammerhead_1 links to Rfam database...	0.56	0.50	0.64	7	7010	29	1	3	25	7
RFA_00703	Hammerhead_1 links to Rfam database...	0.67	0.64	0.69	9	4265	18	1	3	14	5
RFA_00704	Hammerhead_1 links to Rfam database...	0.32	0.21	0.50	3	984	4	0	3	1	11
RFA_00705	Hammerhead_1 links to Rfam database...	0.69	0.71	0.67	10	1020	5	0	5	0	4
RFA_00706	Hammerhead_1 links to Rfam database...	0.37	0.29	0.50	4	1027	4	0	4	0	10
RFA_00707	Hammerhead_1 links to Rfam database...	-0.01	0.00	0.00	0	1028	7	1	6	0	14
RFA_00708	Hammerhead_1 links to Rfam database...	0.40	0.29	0.57	4	1028	3	0	3	0	10
RFA_00709	Hammerhead_1 links to Rfam database...	-0.01	0.00	0.00	0	981	10	0	9	1	14
RFA_00710	Hammerhead_1 links to Rfam database...	0.18	0.14	0.25	2	982	7	0	6	1	12
RFA_00711	Hammerhead_1 links to Rfam database...	-0.01	0.00	0.00	0	1023	12	0	12	0	14
RFA_00715	Hammerhead_1 links to Rfam database...	-0.01	0.00	0.00	0	933	13	0	13	0	14
RFA_00716	Hammerhead_1 links to Rfam database...	-0.01	0.00	0.00	0	934	12	0	12	0	14
RFA_00717	Hammerhead_1 links to Rfam database...	0.64	0.64	0.64	9	889	5	0	5	0	5
RFA_00730	s2m links to Rfam database...	0.69	0.67	0.73	8	892	4	1	2	1	4
RFA_00731	s2m links to Rfam database...	1.00	1.00	1.00	12	891	1	0	0	1	0
RFA_00733	s2m links to Rfam database...	1.00	1.00	1.00	12	891	1	0	0	1	0
RFA_00734	s2m links to Rfam database...	0.78	0.75	0.82	9	892	3	0	2	1	3
RFA_00736	s2m links to Rfam database...	1.00	1.00	1.00	12	891	1	0	0	1	0
RFA_00737	s2m links to Rfam database...	1.00	1.00	1.00	12	891	1	0	0	1	0
RFA_00745	s2m links to Rfam database...	1.00	1.00	1.00	12	934	1	0	0	1	0
RFA_00749	s2m links to Rfam database...	1.00	1.00	1.00	12	891	1	0	0	1	0
RFA_00758	s2m links to Rfam database...	0.96	0.92	1.00	11	892	0	0	0	0	1
RFA_00762	s2m links to Rfam database...	0.64	0.67	0.62	8	890	5	1	4	0	4
RFA_00763	s2m links to Rfam database...	1.00	1.00	1.00	12	891	0	0	0	0	0
RFA_00764	s2m links to Rfam database...	1.00	1.00	1.00	12	891	1	0	0	1	0
RFA_00765	s2m links to Rfam database...	1.00	1.00	1.00	12	891	1	0	0	1	0
RFA_00767	Corona_pk3 links to Rfam database...	0.44	0.44	0.44	8	1873	10	1	9	0	10
RFA_00768	Corona_pk3 links to Rfam database...	0.45	0.44	0.47	8	1874	10	1	8	1	10
RFA_00769	Corona_pk3 links to Rfam database...	0.55	0.56	0.56	10	1935	8	3	5	0	8
RFA_00770	Corona_pk3 links to Rfam database...	0.61	0.56	0.67	10	2001	8	0	5	3	8
RFA_00773	Corona_pk3 links to Rfam database...	0.71	0.56	0.91	10	1942	3	1	0	2	8
RFA_00779	Corona_pk3 links to Rfam database...	0.55	0.56	0.56	10	1935	8	3	5	0	8
RFA_00781	Gammaretro_CES links to Rfam database...	0.66	0.69	0.65	22	5016	12	2	10	0	10
RFA_00786	Gammaretro_CES links to Rfam database...	0.55	0.56	0.55	18	5017	15	2	13	0	14
RFA_00791	Gammaretro_CES links to Rfam database...	0.89	0.84	0.93	27	5122	3	0	2	1	5
RFA_00792	Gammaretro_CES links to Rfam database...	0.94	0.94	0.94	30	5018	4	0	2	2	2
RFA_00801	Gammaretro_CES links to Rfam database...	0.81	0.78	0.83	25	5020	6	0	5	1	7
RFA_00805	RNAIII links to Rfam database...	0.70	0.68	0.72	102	133245	49	5	34	10	48
RFA_00808	RydC links to Rfam database...	-0.01	0.00	0.00	0	2000	18	2	14	2	16
RFA_00809	RydC links to Rfam database...	0.37	0.38	0.38	6	2129	10	1	9	0	10
RFA_00814	R2_retro_el links to Rfam database...	0.22	0.24	0.19	10	25148	51	11	31	9	31
RFA_00815	R2_retro_el links to Rfam database...	0.57	0.61	0.54	25	24485	37	4	17	16	16
RFA_00816	R2_retro_el links to Rfam database...	0.61	0.66	0.56	27	23172	33	13	8	12	14
RFA_00817	R2_retro_el links to Rfam database...	0.35	0.41	0.30	17	21889	43	11	28	4	24
RFA_00818	R2_retro_el links to Rfam database...	0.46	0.54	0.40	22	20246	38	13	20	5	19
RFA_00819	R2_retro_el links to Rfam database...	0.83	0.80	0.85	33	27927	41	0	6	35	8
RFA_00820	bicoid_3 links to Rfam database...	0.82	0.80	0.84	128	151372	39	6	19	14	32
RFA_00830	bicoid_3 links to Rfam database...	0.47	0.45	0.49	69	152488	117	6	65	46	85
SPR_00020	tRNA links to Rfam database...	0.78	0.80	0.76	16	2680	8	1	4	3	4
SPR_00023	tRNA links to Rfam database...	0.49	0.52	0.46	11	2826	13	3	10	0	10
SPR_00137	tRNA links to Rfam database...	0.81	0.81	0.81	17	2905	10	0	4	6	4
SPR_00273	tRNA links to Rfam database...	0.30	0.33	0.28	7	2825	18	2	16	0	14
SPR_00277	tRNA links to Rfam database...	0.98	0.95	1.00	20	2906	0	0	0	0	1
SPR_00394	tRNA links to Rfam database...	0.52	0.52	0.52	11	3634	15	5	5	5	10
SPR_00402	tRNA links to Rfam database...	0.76	0.76	0.76	16	2535	6	0	5	1	5
SPR_00721	tRNA links to Rfam database...	0.48	0.52	0.44	11	2901	14	3	11	0	10
SPR_00816	tRNA links to Rfam database...	0.32	0.35	0.30	7	3463	19	3	13	3	13
SPR_01157	tRNA links to Rfam database...	0.77	0.81	0.74	17	2752	7	0	6	1	4
SRP_00001	Bacteria_large_SRP links to Rfam database...	0.94	0.95	0.93	38	6745	3	1	2	0	2
SRP_00002	Metazoa_SRP links to Rfam database...	0.89	0.88	0.89	90	45049	12	4	7	1	12
SRP_00006	Metazoa_SRP links to Rfam database...	0.85	0.84	0.86	85	45654	17	3	11	3	16
SRP_00008	Bacteria_small_SRP links to Rfam database...	0.58	0.60	0.58	15	2900	13	0	11	2	10
SRP_00009	Plant_SRP links to Rfam database...	0.44	0.44	0.45	45	46565	55	6	49	0	57
SRP_00011	Plant_SRP links to Rfam database...	0.69	0.69	0.69	72	46255	33	2	31	0	32
SRP_00012	Plant_SRP links to Rfam database...	0.74	0.71	0.77	72	46267	22	2	19	1	29
SRP_00015	Plant_SRP links to Rfam database...	0.83	0.80	0.86	79	46268	20	0	13	7	20
SRP_00016	Archaea_SRP links to Rfam database...	0.78	0.78	0.77	85	47785	26	4	21	1	24
SRP_00018	Fungi_SRP links to Rfam database...	0.53	0.54	0.52	44	38419	48	8	32	8	37
SRP_00019	Fungi_SRP links to Rfam database...	0.97	0.96	0.98	87	35957	9	0	2	7	4
SRP_00020	Bacteria_small_SRP links to Rfam database...	0.86	0.88	0.85	29	5531	5	1	4	0	4
SRP_00024	Bacteria_large_SRP links to Rfam database...	0.78	0.80	0.76	70	37583	23	7	15	1	17
SRP_00026	Bacteria_large_SRP links to Rfam database...	0.72	0.69	0.74	61	36774	27	0	21	6	27
SRP_00027	Bacteria_large_SRP links to Rfam database...	0.76	0.77	0.75	67	37039	27	2	20	5	20
SRP_00030	Bacteria_large_SRP links to Rfam database...	0.78	0.81	0.76	71	36762	25	5	18	2	17
SRP_00031	Bacteria_large_SRP links to Rfam database...	0.68	0.70	0.67	62	36223	33	4	26	3	27
SRP_00037	Bacteria_large_SRP links to Rfam database...	0.67	0.68	0.67	59	36497	32	5	24	3	28
SRP_00038	Bacteria_small_SRP links to Rfam database...	0.17	0.18	0.18	6	5016	28	2	26	0	27
SRP_00040	Bacteria_small_SRP links to Rfam database...	0.70	0.74	0.66	23	5530	14	1	11	2	8
SRP_00042	Bacteria_small_SRP links to Rfam database...	0.45	0.48	0.43	12	3977	18	0	16	2	13
SRP_00043	Bacteria_small_SRP links to Rfam database...	0.45	0.48	0.42	14	5017	22	4	15	3	15
SRP_00044	Bacteria_small_SRP links to Rfam database...	0.77	0.75	0.80	24	6075	9	1	5	3	8
SRP_00046	Bacteria_small_SRP links to Rfam database...	0.97	0.97	0.97	31	4721	2	0	1	1	1
SRP_00050	Metazoa_SRP links to Rfam database...	0.96	0.94	0.98	93	44755	4	0	2	2	6
SRP_00051	Bacteria_small_SRP links to Rfam database...	0.30	0.30	0.30	9	5430	23	2	19	2	21
SRP_00053	Metazoa_SRP links to Rfam database...	0.90	0.88	0.91	83	45059	17	2	6	9	11
SRP_00054	Bacteria_small_SRP links to Rfam database...	0.22	0.22	0.23	7	5534	24	3	21	0	25
SRP_00056	Bacteria_small_SRP links to Rfam database...	0.84	0.84	0.84	31	6404	6	1	5	0	6
SRP_00057	Bacteria_small_SRP links to Rfam database...	0.74	0.74	0.74	26	6293	10	1	8	1	9
SRP_00058	Bacteria_small_SRP links to Rfam database...	0.90	0.91	0.89	31	5743	8	1	3	4	3
SRP_00060	Metazoa_SRP links to Rfam database...	0.95	0.93	0.97	93	44455	10	0	3	7	7
SRP_00061	Metazoa_SRP links to Rfam database...	0.92	0.89	0.95	89	44756	13	0	5	8	11
SRP_00066	Metazoa_SRP links to Rfam database...	0.00	0.00	0.00	0	45357	94	10	84	0	100
SRP_00067	Bacteria_small_SRP links to Rfam database...	0.96	0.97	0.95	37	5739	2	1	1	0	1
SRP_00069	Fungi_SRP links to Rfam database...	0.83	0.82	0.83	70	34369	17	1	13	3	15
SRP_00070	Fungi_SRP links to Rfam database...	0.24	0.27	0.20	33	126595	135	37	91	7	88
SRP_00072	Bacteria_small_SRP links to Rfam database...	0.30	0.31	0.30	9	6298	22	1	20	1	20
SRP_00073	Fungi_SRP links to Rfam database...	0.66	0.70	0.63	50	38980	42	8	22	12	21
SRP_00074	Bacteria_small_SRP links to Rfam database...	0.39	0.41	0.36	12	6522	25	3	18	4	17
SRP_00075	Bacteria_small_SRP links to Rfam database...	0.57	0.59	0.56	20	5529	18	3	13	2	14
SRP_00077	Bacteria_small_SRP links to Rfam database...	0.70	0.70	0.70	26	6633	12	0	11	1	11
SRP_00079	Plant_SRP links to Rfam database...	0.53	0.55	0.52	48	41812	50	8	37	5	40
SRP_00081	Bacteria_small_SRP links to Rfam database...	0.69	0.74	0.64	23	5529	13	1	12	0	8
SRP_00084	Bacteria_small_SRP links to Rfam database...	0.87	0.88	0.86	30	5425	5	1	4	0	4
SRP_00085	Plant_SRP links to Rfam database...	0.60	0.58	0.63	59	45357	41	3	32	6	42
SRP_00086	Metazoa_SRP links to Rfam database...	0.58	0.60	0.57	60	44148	46	3	42	1	40
SRP_00087	Fungi_SRP links to Rfam database...	0.19	0.22	0.16	13	37318	75	21	49	5	45
SRP_00088	Bacteria_large_SRP links to Rfam database...	0.69	0.71	0.67	63	34097	31	3	28	0	26
SRP_00089	Bacteria_large_SRP links to Rfam database...	0.72	0.73	0.72	66	35686	26	2	24	0	24
SRP_00090	Bacteria_large_SRP links to Rfam database...	0.27	0.27	0.27	24	35422	66	5	60	1	66
SRP_00091	Fungi_SRP links to Rfam database...	0.81	0.81	0.80	77	52879	23	4	15	4	18
SRP_00094	Bacteria_small_SRP links to Rfam database...	0.84	0.88	0.81	21	4069	5	1	4	0	3
SRP_00095	Bacteria_small_SRP links to Rfam database...	0.85	0.88	0.81	22	3978	5	1	4	0	3
SRP_00098	Bacteria_small_SRP links to Rfam database...	0.76	0.78	0.74	29	6402	11	1	9	1	8
SRP_00099	Plant_SRP links to Rfam database...	0.59	0.61	0.57	58	44748	45	8	36	1	37
SRP_00102	Metazoa_SRP links to Rfam database...	0.77	0.75	0.78	76	44454	24	0	21	3	25
SRP_00103	Metazoa_SRP links to Rfam database...	0.17	0.17	0.17	17	45350	84	8	76	0	85
SRP_00104	Fungi_SRP links to Rfam database...	0.38	0.42	0.34	29	34368	62	8	48	6	40
SRP_00105	Bacteria_small_SRP links to Rfam database...	1.00	1.00	1.00	34	5531	2	0	0	2	0
SRP_00106	Bacteria_large_SRP links to Rfam database...	0.67	0.76	0.59	19	5221	16	5	8	3	6
SRP_00107	Bacteria_small_SRP links to Rfam database...	0.12	0.16	0.11	3	3627	27	5	20	2	16
SRP_00117	Metazoa_SRP links to Rfam database...	0.84	0.82	0.86	84	45353	15	1	13	1	18
SRP_00121	Bacteria_small_SRP links to Rfam database...	0.80	0.80	0.80	20	4253	6	0	5	1	5
SRP_00123	Metazoa_SRP links to Rfam database...	0.85	0.84	0.86	76	36497	15	3	9	3	15
SRP_00124	Metazoa_SRP links to Rfam database...	0.53	0.53	0.54	45	37045	43	3	35	5	40
SRP_00127	Fungi_SRP links to Rfam database...	0.71	0.71	0.71	84	72271	43	6	29	8	35
SRP_00128	Bacteria_small_SRP links to Rfam database...	0.76	0.81	0.73	29	6746	11	1	10	0	7
SRP_00130	Archaea_SRP links to Rfam database...	0.67	0.68	0.65	66	49669	39	4	31	4	31
SRP_00132	Bacteria_small_SRP links to Rfam database...	0.65	0.69	0.63	20	4819	15	0	12	3	9
SRP_00134	Bacteria_large_SRP links to Rfam database...	0.51	0.55	0.48	16	5962	23	3	14	6	13
SRP_00136	Fungi_SRP links to Rfam database...	0.37	0.42	0.33	30	44163	66	19	41	6	41
SRP_00137	Bacteria_small_SRP links to Rfam database...	0.74	0.84	0.66	21	4154	13	4	7	2	4
SRP_00141	Bacteria_small_SRP links to Rfam database...	0.92	0.93	0.90	38	6286	5	1	3	1	3
SRP_00142	Archaea_SRP links to Rfam database...	0.56	0.58	0.54	54	45956	48	5	41	2	39
SRP_00143	Archaea_SRP links to Rfam database...	0.36	0.38	0.35	38	49660	74	7	65	2	63
SRP_00144	Archaea_SRP links to Rfam database...	0.41	0.43	0.40	40	46564	66	9	52	5	54
SRP_00145	Bacteria_small_SRP links to Rfam database...	0.96	0.98	0.95	39	6287	2	1	1	0	1
SRP_00146	Bacteria_small_SRP links to Rfam database...	0.93	0.94	0.92	34	5216	3	1	2	0	2
SRP_00148	Fungi_SRP links to Rfam database...	0.55	0.57	0.53	50	49992	56	4	40	12	37
SRP_00152	Plant_SRP links to Rfam database...	0.70	0.68	0.71	70	45655	30	1	27	2	33
SRP_00153	Plant_SRP links to Rfam database...	0.74	0.73	0.75	78	46867	28	6	20	2	29
SRP_00157	Fungi_SRP links to Rfam database...	0.38	0.42	0.35	30	44168	62	14	41	7	42
SRP_00158	Fungi_SRP links to Rfam database...	0.32	0.38	0.27	44	124086	125	51	70	4	71
SRP_00160	Fungi_SRP links to Rfam database...	0.41	0.42	0.41	54	86189	80	6	71	3	76
SRP_00161	Bacteria_small_SRP links to Rfam database...	0.33	0.36	0.31	8	2824	18	5	13	0	14
SRP_00162	Bacteria_small_SRP links to Rfam database...	0.89	0.91	0.88	21	2902	4	0	3	1	2
SRP_00163	Bacteria_small_SRP links to Rfam database...	0.76	0.81	0.72	21	3457	8	2	6	0	5
SRP_00164	Bacteria_small_SRP links to Rfam database...	0.96	0.97	0.94	34	6867	2	1	1	0	1
SRP_00170	Bacteria_small_SRP links to Rfam database...	0.55	0.56	0.54	14	4069	13	0	12	1	11
SRP_00171	Metazoa_SRP links to Rfam database...	0.00	0.00	0.00	0	45351	100	15	85	0	88
SRP_00173	Bacteria_large_SRP links to Rfam database...	0.79	0.80	0.78	72	38134	26	1	19	6	18
SRP_00174	Bacteria_large_SRP links to Rfam database...	0.77	0.80	0.73	69	38687	29	7	18	4	17
SRP_00175	Fungi_SRP links to Rfam database...	0.10	0.11	0.09	9	44454	90	12	76	2	75
SRP_00178	Plant_SRP links to Rfam database...	0.80	0.77	0.82	79	45657	19	1	16	2	23
SRP_00179	Plant_SRP links to Rfam database...	0.76	0.75	0.77	79	45953	28	5	19	4	26
SRP_00181	Plant_SRP links to Rfam database...	0.36	0.35	0.37	36	45958	62	4	58	0	66
SRP_00182	Plant_SRP links to Rfam database...	0.67	0.65	0.68	66	45959	34	5	26	3	35
SRP_00184	Plant_SRP links to Rfam database...	0.76	0.75	0.78	75	45960	25	1	20	4	25
SRP_00188	Plant_SRP links to Rfam database...	0.16	0.16	0.16	13	31045	67	6	61	0	66
SRP_00194	Bacteria_small_SRP links to Rfam database...	0.77	0.81	0.74	17	3217	9	0	6	3	4
SRP_00197	Archaea_SRP links to Rfam database...	0.34	0.33	0.35	33	49360	62	5	57	0	68
SRP_00198	Archaea_SRP links to Rfam database...	0.21	0.21	0.21	22	50936	82	8	74	0	81
SRP_00199	Archaea_SRP links to Rfam database...	0.62	0.62	0.61	65	50934	43	3	38	2	40
SRP_00200	Bacteria_small_SRP links to Rfam database...	0.93	0.94	0.92	34	6866	3	1	2	0	2
SRP_00201	Archaea_SRP links to Rfam database...	0.77	0.77	0.78	85	47786	26	1	23	2	26
SRP_00202	Archaea_SRP links to Rfam database...	0.89	0.89	0.89	104	54168	15	2	11	2	13
SRP_00203	Archaea_SRP links to Rfam database...	0.71	0.72	0.69	76	48718	42	1	33	8	29
SRP_00204	Archaea_SRP links to Rfam database...	0.66	0.67	0.65	68	49037	37	7	29	1	34
SRP_00206	Archaea_SRP links to Rfam database...	0.84	0.83	0.84	90	47788	18	6	11	1	18
SRP_00208	Archaea_SRP links to Rfam database...	0.64	0.63	0.65	64	46566	37	6	29	2	37
SRP_00209	Bacteria_small_SRP links to Rfam database...	0.78	0.81	0.76	22	4627	7	1	6	0	5
SRP_00213	Bacteria_small_SRP links to Rfam database...	0.66	0.68	0.65	17	4160	11	1	8	2	8
SRP_00215	Bacteria_small_SRP links to Rfam database...	0.82	0.80	0.83	20	3216	4	0	4	0	5
SRP_00216	Bacteria_small_SRP links to Rfam database...	0.93	0.93	0.93	25	3376	3	1	1	1	2
SRP_00217	Bacteria_small_SRP links to Rfam database...	0.94	0.96	0.92	23	3296	3	0	2	1	1
SRP_00219	Bacteria_small_SRP links to Rfam database...	0.94	0.96	0.92	22	3297	3	0	2	1	1
SRP_00222	Bacteria_small_SRP links to Rfam database...	0.92	0.92	0.92	23	3056	3	1	1	1	2
SRP_00227	Bacteria_small_SRP links to Rfam database...	0.95	0.97	0.94	30	5119	2	1	1	0	1
SRP_00228	Metazoa_SRP links to Rfam database...	0.98	0.98	0.98	93	45356	11	0	2	9	2
SRP_00229	Bacteria_small_SRP links to Rfam database...	0.31	0.33	0.30	9	5223	21	5	16	0	18
SRP_00230	Fungi_SRP links to Rfam database...	0.77	0.79	0.76	71	39527	26	3	20	3	19
SRP_00231	Bacteria_small_SRP links to Rfam database...	0.87	0.88	0.86	30	5425	5	1	4	0	4
SRP_00233	Bacteria_small_SRP links to Rfam database...	1.00	1.00	1.00	33	5118	0	0	0	0	0
SRP_00234	Bacteria_large_SRP links to Rfam database...	0.84	0.85	0.84	73	36228	20	0	14	6	13
SRP_00239	Plant_SRP links to Rfam database...	0.27	0.28	0.26	26	50302	76	19	56	1	67
SRP_00240	Plant_SRP links to Rfam database...	0.61	0.62	0.61	63	48102	47	3	37	7	39
SRP_00241	Plant_SRP links to Rfam database...	0.45	0.49	0.41	40	45958	60	17	41	2	42
SRP_00243	Bacteria_small_SRP links to Rfam database...	0.97	0.94	1.00	29	5122	1	0	0	1	2
SRP_00244	Bacteria_small_SRP links to Rfam database...	0.51	0.51	0.51	20	6864	19	3	16	0	19
SRP_00247	Metazoa_SRP links to Rfam database...	0.38	0.40	0.36	35	47180	67	11	52	4	52
SRP_00250	Bacteria_small_SRP links to Rfam database...	0.78	0.81	0.76	29	6748	11	1	8	2	7
SRP_00251	Bacteria_small_SRP links to Rfam database...	0.75	0.78	0.72	28	6982	11	1	10	0	8
SRP_00252	Metazoa_SRP links to Rfam database...	0.55	0.57	0.53	51	49045	50	9	36	5	38
SRP_00253	Metazoa_SRP links to Rfam database...	0.60	0.63	0.58	57	49356	46	9	33	4	33
SRP_00254	Fungi_SRP links to Rfam database...	0.49	0.54	0.45	33	32312	45	11	29	5	28
SRP_00255	Archaea_SRP links to Rfam database...	0.54	0.55	0.52	52	47486	53	3	45	5	42
SRP_00257	Metazoa_SRP links to Rfam database...	0.84	0.85	0.83	92	50929	21	4	15	2	16
SRP_00260	Metazoa_SRP links to Rfam database...	0.60	0.62	0.57	62	47787	49	5	41	3	38
SRP_00265	Fungi_SRP links to Rfam database...	0.51	0.56	0.47	41	41241	57	10	36	11	32
SRP_00266	Bacteria_small_SRP links to Rfam database...	0.72	0.72	0.72	21	4627	9	1	7	1	8
SRP_00267	Metazoa_SRP links to Rfam database...	0.84	0.84	0.84	81	44455	22	0	15	7	15
SRP_00268	Bacteria_small_SRP links to Rfam database...	0.93	0.93	0.93	25	4159	2	1	1	0	2
SRP_00269	Bacteria_small_SRP links to Rfam database...	0.56	0.58	0.54	19	5015	16	3	13	0	14
SRP_00270	Bacteria_small_SRP links to Rfam database...	0.43	0.45	0.41	14	4622	20	2	18	0	17
SRP_00271	Bacteria_small_SRP links to Rfam database...	-0.01	0.00	0.00	0	3215	25	1	24	0	24
SRP_00273	Bacteria_small_SRP links to Rfam database...	0.91	0.93	0.90	37	6745	5	1	3	1	3
SRP_00274	Bacteria_small_SRP links to Rfam database...	0.96	0.97	0.95	37	6864	2	1	1	0	1
SRP_00276	Archaea_SRP links to Rfam database...	0.86	0.85	0.86	94	50612	16	5	10	1	16
SRP_00278	Archaea_SRP links to Rfam database...	0.66	0.67	0.66	70	45950	39	6	30	3	35
SRP_00282	Metazoa_SRP links to Rfam database...	0.30	0.37	0.25	23	43273	76	23	46	7	40
SRP_00285	Bacteria_small_SRP links to Rfam database...	0.98	0.97	1.00	29	3712	0	0	0	0	1
SRP_00286	Fungi_SRP links to Rfam database...	0.62	0.61	0.63	106	136857	71	2	61	8	68
SRP_00287	Fungi_SRP links to Rfam database...	0.51	0.54	0.49	87	141602	95	15	74	6	75
SRP_00290	Fungi_SRP links to Rfam database...	0.64	0.66	0.63	89	100435	62	3	49	10	46
SRP_00292	Fungi_SRP links to Rfam database...	0.55	0.54	0.56	93	137385	77	3	69	5	80
SRP_00294	Fungi_SRP links to Rfam database...	0.22	0.23	0.22	38	129112	139	16	120	3	129
SRP_00295	Bacteria_small_SRP links to Rfam database...	0.96	0.97	0.95	37	6864	3	1	1	1	1
SRP_00299	Metazoa_SRP links to Rfam database...	0.73	0.71	0.74	70	44159	30	1	23	6	29
SRP_00300	Metazoa_SRP links to Rfam database...	0.93	0.91	0.96	86	44163	9	0	4	5	8
SRP_00301	Fungi_SRP links to Rfam database...	0.87	0.87	0.86	75	32553	17	1	11	5	11
SRP_00302	Fungi_SRP links to Rfam database...	0.38	0.40	0.37	32	41529	63	10	45	8	49
SRP_00303	Bacteria_small_SRP links to Rfam database...	0.84	0.88	0.80	28	6635	7	1	6	0	4
SRP_00308	Bacteria_large_SRP links to Rfam database...	0.73	0.74	0.72	65	36225	26	2	23	1	23
SRP_00310	Bacteria_small_SRP links to Rfam database...	0.87	0.87	0.87	20	2903	4	0	3	1	3
SRP_00312	Bacteria_small_SRP links to Rfam database...	0.32	0.33	0.31	9	4157	20	3	17	0	18
SRP_00315	Bacteria_small_SRP links to Rfam database...	0.87	0.87	0.87	20	2903	3	0	3	0	3
SRP_00317	Metazoa_SRP links to Rfam database...	0.88	0.86	0.91	84	45058	15	0	8	7	14
SRP_00318	Bacteria_small_SRP links to Rfam database...	0.87	0.87	0.87	20	2980	3	0	3	0	3
SRP_00321	Archaea_SRP links to Rfam database...	0.56	0.57	0.54	62	47471	54	11	42	1	46
SRP_00322	Archaea_SRP links to Rfam database...	0.77	0.77	0.76	84	48406	28	0	26	2	25
SRP_00323	Archaea_SRP links to Rfam database...	0.81	0.80	0.81	86	47172	23	0	20	3	21
SRP_00324	Bacteria_small_SRP links to Rfam database...	0.57	0.62	0.53	18	5322	16	5	11	0	11
SRP_00325	Bacteria_small_SRP links to Rfam database...	1.00	1.00	1.00	33	4338	0	0	0	0	0
SRP_00326	Bacteria_small_SRP links to Rfam database...	0.53	0.55	0.52	17	5017	16	3	13	0	14
SRP_00328	Metazoa_SRP links to Rfam database...	0.63	0.65	0.62	55	39532	39	8	26	5	30
SRP_00329	Metazoa_SRP links to Rfam database...	0.64	0.65	0.63	55	39816	37	5	27	5	30
SRP_00330	Archaea_SRP links to Rfam database...	0.69	0.71	0.67	67	49986	37	4	29	4	28
SRP_00331	Metazoa_SRP links to Rfam database...	0.58	0.57	0.58	50	37589	39	3	33	3	37
SRP_00332	Archaea_SRP links to Rfam database...	0.67	0.69	0.66	73	50292	39	8	30	1	33
SRP_00333	Bacteria_small_SRP links to Rfam database...	0.86	0.85	0.88	29	5118	4	0	4	0	5
SRP_00335	Bacteria_large_SRP links to Rfam database...	0.31	0.44	0.22	17	35169	79	27	32	20	22
SRP_00337	Bacteria_large_SRP links to Rfam database...	0.77	0.76	0.78	69	35423	21	0	19	2	22
SRP_00338	Bacteria_small_SRP links to Rfam database...	0.97	0.97	0.97	35	5424	1	0	1	0	1
SRP_00339	Archaea_SRP links to Rfam database...	0.66	0.68	0.65	64	44452	40	5	30	5	30
SRP_00340	Metazoa_SRP links to Rfam database...	0.50	0.54	0.47	44	41234	52	8	42	2	38
SRP_00341	Bacteria_small_SRP links to Rfam database...	0.47	0.48	0.45	15	4720	18	0	18	0	16
SRP_00342	Bacteria_small_SRP links to Rfam database...	0.55	0.56	0.54	14	3979	17	1	11	5	11
SRP_00347	Metazoa_SRP links to Rfam database...	0.76	0.78	0.75	75	46565	30	3	22	5	21
SRP_00350	Bacteria_small_SRP links to Rfam database...	0.74	0.74	0.74	20	3889	8	1	6	1	7
SRP_00356	Bacteria_small_SRP links to Rfam database...	0.83	0.80	0.86	24	5022	4	0	4	0	6
SRP_00357	Bacteria_small_SRP links to Rfam database...	0.96	0.97	0.95	35	5319	2	1	1	0	1
SRP_00358	Bacteria_small_SRP links to Rfam database...	0.96	0.97	0.94	34	6292	2	1	1	0	1
SRP_00361	Plant_SRP links to Rfam database...	0.72	0.74	0.70	67	41809	36	5	24	7	23
SRP_00363	Bacteria_small_SRP links to Rfam database...	0.95	0.97	0.94	29	4722	4	0	2	2	1
SRP_00365	Bacteria_small_SRP links to Rfam database...	0.94	0.93	0.96	25	3377	1	0	1	0	2
SRP_00367	Bacteria_small_SRP links to Rfam database...	0.96	0.97	0.94	34	6750	2	1	1	0	1
SRP_00368	Metazoa_SRP links to Rfam database...	0.90	0.90	0.91	88	43859	12	1	8	3	10
SRP_00369	Bacteria_small_SRP links to Rfam database...	0.96	0.97	0.94	34	5742	2	1	1	0	1
SRP_00371	Fungi_SRP links to Rfam database...	0.79	0.80	0.78	66	36230	24	2	17	5	16
SRP_00382	Fungi_SRP links to Rfam database...	0.54	0.54	0.54	92	141608	86	8	70	8	78
SRP_00383	Bacteria_small_SRP links to Rfam database...	0.41	0.42	0.42	10	3216	14	3	11	0	14
TMR_00173	tmRNA links to Rfam database...	0.30	0.36	0.25	15	42135	72	17	28	27	27
TMR_00357	tmRNA links to Rfam database...	0.29	0.32	0.28	29	82923	92	22	54	16	63
TMR_00601	tmRNA links to Rfam database...	0.65	0.60	0.71	25	58961	73	0	10	63	17
TMR_00696	tmRNA links to Rfam database...	0.47	0.47	0.46	54	84961	78	11	52	15	60

^top

Performance of RSpredict(seed) - scored lower in this pairwise comparison

1. Total counts & total scores for RSpredict(seed)

Total Base Pair Counts
Total TP	17152
Total TN	97026395
Total FP	13582
Total FP CONTRA	1581
Total FP INCONS	9998
Total FP COMP	2003
Total FN	57779

Total Scores
MCC	0.369
Average MCC ± 95% Confidence Intervals	0.246 ± 0.022
Sensitivity	0.229
Positive Predictive Value	0.597
Nr of predictions	702

^top

2. Individual counts for RSpredict(seed) [ download as .csv ]

RNA Chain	Rfam family	MCC	SENS	PPV	TP	TN	FP	FP CONTRA	FP INCONS	FP COMP	FN
ASE_00001	RNaseP_arch links to Rfam database...	0.00	0.00	0.00	0	34191	0	0	0	0	75
ASE_00002	RNaseP_arch links to Rfam database...	0.00	0.00	0.00	0	35511	0	0	0	0	73
ASE_00004	RNaseP_bact_a links to Rfam database...	0.00	0.00	0.00	0	47894	2	0	1	1	97
ASE_00005	RNaseP_bact_a links to Rfam database...	0.14	0.03	0.57	4	57963	3	0	3	0	113
ASE_00006	RNaseP_bact_a links to Rfam database...	0.00	0.00	0.00	0	47583	3	0	3	0	93
ASE_00007	RNaseP_bact_a links to Rfam database...	0.16	0.05	0.56	5	59676	4	0	4	0	105
ASE_00009	RNaseP_arch links to Rfam database...	0.00	0.00	0.00	0	26106	0	0	0	0	67
ASE_00010	RNaseP_bact_b links to Rfam database...	0.00	0.00	0.00	0	49754	16	4	12	0	82
ASE_00012	RNaseP_bact_a links to Rfam database...	0.00	0.00	0.00	0	73914	6	0	6	0	123
ASE_00014	RNaseP_arch links to Rfam database...	0.00	0.00	0.00	0	54285	0	0	0	0	106
ASE_00017	RNaseP_nuc links to Rfam database...	0.00	0.00	0.00	0	51038	2	0	2	0	64
ASE_00018	RNaseP_bact_a links to Rfam database...	0.13	0.04	0.35	6	80584	11	0	11	0	128
ASE_00020	RNaseP_bact_a links to Rfam database...	0.04	0.01	0.25	1	73916	3	0	3	0	125
ASE_00021	RNaseP_bact_a links to Rfam database...	0.00	0.00	0.00	0	104189	7	1	6	0	160
ASE_00022	RNaseP_bact_b links to Rfam database...	0.00	0.00	0.00	0	83008	21	3	17	1	124
ASE_00023	RNaseP_bact_a links to Rfam database...	0.00	0.00	0.00	0	84246	9	0	9	0	127
ASE_00025	RNaseP_nuc links to Rfam database...	0.00	0.00	0.00	0	78605	1	0	1	0	71
ASE_00026	RNaseP_bact_a links to Rfam database...	0.07	0.02	0.25	2	59677	6	1	5	0	108
ASE_00028	RNaseP_bact_b links to Rfam database...	0.02	0.01	0.05	1	84646	22	5	14	3	125
ASE_00029	RNaseP_bact_a links to Rfam database...	0.00	0.00	0.00	0	83024	4	0	4	0	122
ASE_00030	RNaseP_bact_a links to Rfam database...	0.11	0.03	0.44	4	85482	5	0	5	0	141
ASE_00031	RNaseP_bact_a links to Rfam database...	0.00	0.00	0.00	0	86724	12	2	10	0	126
ASE_00032	RNaseP_bact_a links to Rfam database...	0.00	0.00	0.00	0	80196	5	0	4	1	118
ASE_00033	RNaseP_bact_a links to Rfam database...	0.12	0.03	0.44	4	64971	5	0	5	0	117
ASE_00035	RNaseP_bact_a links to Rfam database...	0.00	0.00	0.00	0	70496	6	0	4	2	118
ASE_00036	RNaseP_bact_a links to Rfam database...	0.00	0.00	0.00	0	75845	10	0	10	0	132
ASE_00037	RNaseP_bact_a links to Rfam database...	0.00	0.00	0.00	0	59335	5	0	5	0	110
ASE_00038	RNaseP_bact_a links to Rfam database...	0.00	0.00	0.00	0	53623	5	0	5	0	101
ASE_00040	RNaseP_bact_a links to Rfam database...	0.02	0.01	0.07	1	78989	13	0	13	0	132
ASE_00041	RNaseP_bact_a links to Rfam database...	0.00	0.00	0.00	0	57624	6	0	6	0	108
ASE_00042	RNaseP_bact_a links to Rfam database...	0.09	0.03	0.29	4	90086	10	0	10	0	141
ASE_00044	RNaseP_bact_a links to Rfam database...	0.03	0.01	0.10	1	54605	9	0	9	0	104
ASE_00045	RNaseP_bact_b links to Rfam database...	0.00	0.00	0.00	0	47271	9	0	7	2	80
ASE_00046	RNaseP_bact_a links to Rfam database...	0.11	0.03	0.43	3	50396	4	0	4	0	100
ASE_00047	RNaseP_bact_a links to Rfam database...	0.00	0.00	0.00	0	74303	2	0	2	0	130
ASE_00052	RNaseP_bact_a links to Rfam database...	0.18	0.04	0.71	5	61418	2	0	2	0	107
ASE_00053	RNaseP_bact_a links to Rfam database...	0.00	0.00	0.00	0	79398	3	0	3	0	133
ASE_00057	RNaseP_bact_a links to Rfam database...	0.05	0.01	0.17	2	82203	11	0	10	1	132
ASE_00064	RNaseP_bact_a links to Rfam database...	0.00	0.00	0.00	0	45448	3	0	3	0	89
ASE_00066	RNaseP_bact_a links to Rfam database...	0.16	0.03	0.80	4	72385	1	0	1	0	126
ASE_00068	RNaseP_bact_a links to Rfam database...	0.05	0.01	0.25	1	37671	3	0	3	0	84
ASE_00069	RNaseP_bact_a links to Rfam database...	0.00	0.00	0.00	0	83022	6	1	5	0	140
ASE_00074	RNaseP_bact_a links to Rfam database...	0.21	0.07	0.67	8	67884	4	0	4	0	111
ASE_00075	RNaseP_bact_a links to Rfam database...	0.00	0.00	0.00	0	108804	8	0	7	1	162
ASE_00076	RNaseP_bact_a links to Rfam database...	0.00	0.00	0.00	0	68256	9	0	9	0	118
ASE_00077	RNaseP_bact_a links to Rfam database...	0.09	0.02	0.33	2	45144	4	1	3	0	84
ASE_00078	RNaseP_bact_a links to Rfam database...	0.00	0.00	0.00	0	43071	0	0	0	0	83
ASE_00079	RNaseP_bact_a links to Rfam database...	0.00	0.00	0.00	0	55606	5	0	5	0	100
ASE_00080	RNaseP_bact_a links to Rfam database...	0.00	0.00	0.00	0	71623	9	2	6	1	123
ASE_00081	RNaseP_bact_a links to Rfam database...	0.00	0.00	0.00	0	49768	2	0	2	0	97
ASE_00082	RNaseP_bact_a links to Rfam database...	0.00	0.00	0.00	0	70494	6	0	6	0	116
ASE_00083	RNaseP_bact_a links to Rfam database...	0.00	0.00	0.00	0	62477	5	0	4	1	110
ASE_00084	RNaseP_bact_a links to Rfam database...	0.00	0.00	0.00	0	53625	4	0	3	1	99
ASE_00087	RNaseP_bact_a links to Rfam database...	0.00	0.00	0.00	0	88406	4	0	4	0	144
ASE_00090	RNaseP_bact_a links to Rfam database...	0.04	0.01	0.17	1	55605	5	0	5	0	100
ASE_00092	RNaseP_bact_a links to Rfam database...	0.04	0.01	0.20	1	63541	4	0	4	0	112
ASE_00096	RNaseP_bact_a links to Rfam database...	0.00	0.00	0.00	0	63542	4	0	4	0	115
ASE_00099	RNaseP_bact_a links to Rfam database...	0.20	0.07	0.62	8	64607	5	0	5	0	112
ASE_00100	RNaseP_nuc links to Rfam database...	0.00	0.00	0.00	0	82213	2	1	1	0	76
ASE_00102	RNaseP_bact_a links to Rfam database...	0.00	0.00	0.00	0	117845	10	0	10	0	166
ASE_00104	RNaseP_bact_a links to Rfam database...	0.10	0.03	0.31	4	64248	9	0	9	0	115
ASE_00105	RNaseP_bact_a links to Rfam database...	0.00	0.00	0.00	0	64254	7	0	7	0	111
ASE_00107	RNaseP_bact_a links to Rfam database...	0.13	0.03	0.50	4	73145	4	0	4	0	123
ASE_00108	RNaseP_nuc links to Rfam database...	0.00	0.00	0.00	0	46969	2	2	0	0	63
ASE_00111	RNaseP_nuc links to Rfam database...	0.00	0.00	0.00	0	50084	2	2	0	0	57
ASE_00112	RNaseP_bact_a links to Rfam database...	0.00	0.00	0.00	0	75461	5	1	4	0	116
ASE_00114	RNaseP_bact_b links to Rfam database...	0.00	0.00	0.00	0	45440	14	0	11	3	77
ASE_00115	RNaseP_bact_a links to Rfam database...	0.00	0.00	0.00	0	54615	0	0	0	0	101
ASE_00116	RNaseP_arch links to Rfam database...	0.00	0.00	0.00	0	31626	0	0	0	0	66
ASE_00118	RNaseP_bact_a links to Rfam database...	0.00	0.00	0.00	0	60722	6	0	4	2	102
ASE_00119	RNaseP_bact_a links to Rfam database...	0.00	0.00	0.00	0	62834	3	0	1	2	108
ASE_00120	RNaseP_arch links to Rfam database...	0.00	0.00	0.00	0	46970	1	0	1	0	94
ASE_00121	RNaseP_arch links to Rfam database...	0.00	0.00	0.00	0	45150	0	0	0	0	92
ASE_00122	RNaseP_bact_a links to Rfam database...	0.00	0.00	0.00	0	43360	6	0	5	1	88
ASE_00123	RNaseP_bact_a links to Rfam database...	0.00	0.00	0.00	0	38499	4	0	4	0	85
ASE_00125	RNaseP_bact_a links to Rfam database...	0.00	0.00	0.00	0	39337	3	0	3	0	88
ASE_00126	RNaseP_bact_a links to Rfam database...	0.00	0.00	0.00	0	40468	2	0	2	0	82
ASE_00128	RNaseP_bact_a links to Rfam database...	0.00	0.00	0.00	0	53297	4	1	3	0	100
ASE_00129	RNaseP_bact_a links to Rfam database...	0.00	0.00	0.00	0	62821	18	1	13	4	111
ASE_00131	RNaseP_bact_a links to Rfam database...	0.30	0.15	0.59	13	39318	15	0	9	6	72
ASE_00132	RNaseP_bact_a links to Rfam database...	0.00	0.00	0.00	0	50401	3	0	2	1	95
ASE_00134	RNaseP_bact_a links to Rfam database...	0.00	0.00	0.00	0	50397	6	0	6	0	95
ASE_00135	RNaseP_bact_a links to Rfam database...	0.00	0.00	0.00	0	63187	3	0	3	0	109
ASE_00136	RNaseP_bact_a links to Rfam database...	0.00	0.00	0.00	0	48202	4	0	3	1	92
ASE_00137	RNaseP_bact_a links to Rfam database...	0.00	0.00	0.00	0	48512	4	0	4	0	98
ASE_00138	RNaseP_bact_a links to Rfam database...	0.00	0.00	0.00	0	40467	3	0	3	0	81
ASE_00139	RNaseP_bact_a links to Rfam database...	0.00	0.00	0.00	0	54280	5	0	5	0	104
ASE_00140	RNaseP_bact_a links to Rfam database...	0.04	0.01	0.20	1	70871	4	1	3	0	124
ASE_00142	RNaseP_bact_a links to Rfam database...	0.06	0.02	0.25	2	67153	6	0	6	0	120
ASE_00145	RNaseP_arch links to Rfam database...	0.00	0.00	0.00	0	70125	0	0	0	0	111
ASE_00146	RNaseP_bact_a links to Rfam database...	0.09	0.02	0.38	3	70868	5	0	5	0	121
ASE_00148	RNaseP_arch links to Rfam database...	0.00	0.00	0.00	0	112574	1	1	0	0	154
ASE_00151	RNaseP_bact_a links to Rfam database...	0.00	0.00	0.00	0	52000	4	1	2	1	98
ASE_00153	RNaseP_nuc links to Rfam database...	0.00	0.00	0.00	0	57629	1	1	0	0	73
ASE_00154	RNaseP_arch links to Rfam database...	0.00	0.00	0.00	0	65341	0	0	0	0	107
ASE_00155	RNaseP_arch links to Rfam database...	0.00	0.00	0.00	0	93528	0	0	0	0	142
ASE_00161	RNaseP_bact_b links to Rfam database...	0.00	0.00	0.00	0	53619	12	2	7	3	87
ASE_00163	RNaseP_bact_a links to Rfam database...	0.00	0.00	0.00	0	53297	4	1	3	0	93
ASE_00165	RNaseP_bact_a links to Rfam database...	0.11	0.02	0.67	2	52972	1	0	1	0	99
ASE_00168	RNaseP_nuc links to Rfam database...	0.00	0.00	0.00	0	60725	1	1	0	0	64
ASE_00169	RNaseP_bact_a links to Rfam database...	0.00	0.00	0.00	0	57287	4	0	4	0	107
ASE_00170	RNaseP_bact_a links to Rfam database...	0.04	0.01	0.17	1	48822	5	0	5	0	92
ASE_00171	RNaseP_bact_a links to Rfam database...	0.00	0.00	0.00	0	48513	4	0	3	1	94
ASE_00172	RNaseP_bact_a links to Rfam database...	0.00	0.00	0.00	0	58988	8	0	8	0	106
ASE_00174	RNaseP_bact_a links to Rfam database...	0.00	0.00	0.00	0	61075	0	0	0	0	109
ASE_00175	RNaseP_bact_a links to Rfam database...	0.05	0.02	0.14	2	60017	14	0	12	2	105
ASE_00176	RNaseP_bact_a links to Rfam database...	0.00	0.00	0.00	0	60020	11	3	8	0	110
ASE_00179	RNaseP_bact_a links to Rfam database...	0.09	0.04	0.23	3	44240	12	1	9	2	81
ASE_00180	RNaseP_bact_a links to Rfam database...	0.00	0.00	0.00	0	51355	5	3	2	0	100
ASE_00181	RNaseP_bact_a links to Rfam database...	0.00	0.00	0.00	0	57627	3	0	3	0	106
ASE_00182	RNaseP_bact_a links to Rfam database...	0.00	0.00	0.00	0	84254	1	0	1	0	136
ASE_00184	RNaseP_bact_a links to Rfam database...	0.09	0.03	0.30	3	54605	7	0	7	0	99
ASE_00185	RNaseP_bact_a links to Rfam database...	0.00	0.00	0.00	0	73531	5	0	5	0	128
ASE_00186	RNaseP_bact_a links to Rfam database...	0.00	0.00	0.00	0	78994	9	1	8	0	132
ASE_00187	RNaseP_arch links to Rfam database...	0.00	0.00	0.00	0	68630	5	3	2	0	115
ASE_00189	RNaseP_bact_b links to Rfam database...	0.00	0.00	0.00	0	63180	13	1	9	3	102
ASE_00190	RNaseP_bact_b links to Rfam database...	0.00	0.00	0.00	0	45437	15	3	11	1	90
ASE_00191	RNaseP_arch links to Rfam database...	0.00	0.00	0.00	0	29646	0	0	0	0	61
ASE_00192	RNaseP_bact_b links to Rfam database...	0.00	0.00	0.00	0	84653	14	3	10	1	133
ASE_00194	RNaseP_bact_b links to Rfam database...	0.00	0.00	0.00	0	73523	15	0	13	2	119
ASE_00196	RNaseP_arch links to Rfam database...	0.00	0.00	0.00	0	31626	0	0	0	0	75
ASE_00197	RNaseP_bact_a links to Rfam database...	0.03	0.01	0.13	1	89245	7	0	7	0	144
ASE_00198	RNaseP_bact_a links to Rfam database...	0.15	0.04	0.57	4	52643	3	0	3	0	98
ASE_00203	RNaseP_bact_a links to Rfam database...	0.00	0.00	0.00	0	46663	2	0	2	0	96
ASE_00204	RNaseP_bact_b links to Rfam database...	0.06	0.03	0.13	3	67873	20	6	14	0	109
ASE_00205	RNaseP_arch links to Rfam database...	0.00	0.00	0.00	0	46056	0	0	0	0	90
ASE_00209	RNaseP_arch links to Rfam database...	0.00	0.00	0.00	0	43071	0	0	0	0	88
ASE_00210	RNaseP_arch links to Rfam database...	0.00	0.00	0.00	0	27261	0	0	0	0	65
ASE_00212	RNaseP_bact_a links to Rfam database...	0.00	0.00	0.00	0	93956	5	0	5	0	148
ASE_00213	RNaseP_arch links to Rfam database...	0.00	0.00	0.00	0	27261	0	0	0	0	66
ASE_00214	RNaseP_bact_a links to Rfam database...	0.00	0.00	0.00	0	56271	9	0	9	0	103
ASE_00215	RNaseP_bact_a links to Rfam database...	0.00	0.00	0.00	0	48513	3	0	3	0	99
ASE_00216	RNaseP_bact_a links to Rfam database...	0.00	0.00	0.00	0	39338	2	0	2	0	82
ASE_00217	RNaseP_bact_a links to Rfam database...	0.16	0.04	0.57	4	40463	3	0	3	0	86
ASE_00221	RNaseP_bact_a links to Rfam database...	0.00	0.00	0.00	0	64617	3	0	3	0	117
ASE_00222	RNaseP_arch links to Rfam database...	0.00	0.00	0.00	0	112101	0	0	0	0	157
ASE_00227	RNaseP_bact_a links to Rfam database...	0.00	0.00	0.00	0	78993	10	3	7	0	133
ASE_00228	RNaseP_bact_a links to Rfam database...	0.00	0.00	0.00	0	46967	4	0	4	0	86
ASE_00229	RNaseP_bact_a links to Rfam database...	0.00	0.00	0.00	0	42482	4	1	3	0	87
ASE_00231	RNaseP_bact_a links to Rfam database...	0.07	0.02	0.22	2	47886	8	2	5	1	94
ASE_00232	RNaseP_bact_a links to Rfam database...	0.09	0.02	0.33	2	38497	4	0	4	0	82
ASE_00234	RNaseP_bact_a links to Rfam database...	0.00	0.00	0.00	0	75463	3	1	2	0	129
ASE_00237	RNaseP_nuc links to Rfam database...	0.00	0.00	0.00	0	45751	2	0	2	0	56
ASE_00238	RNaseP_bact_a links to Rfam database...	0.07	0.01	0.50	1	64259	1	0	1	0	113
ASE_00240	RNaseP_bact_a links to Rfam database...	0.00	0.00	0.00	0	46660	5	0	5	0	93
ASE_00241	RNaseP_bact_a links to Rfam database...	0.00	0.00	0.00	0	43954	2	0	2	0	87
ASE_00242	RNaseP_bact_a links to Rfam database...	0.12	0.04	0.40	4	61065	6	0	6	0	108
ASE_00245	RNaseP_nuc links to Rfam database...	0.00	0.00	0.00	0	55278	2	0	0	2	78
ASE_00246	RNaseP_nuc links to Rfam database...	0.00	0.00	0.00	0	48202	3	0	3	0	67
ASE_00247	RNaseP_nuc links to Rfam database...	0.00	0.00	0.00	0	54284	1	1	0	0	64
ASE_00248	RNaseP_bact_a links to Rfam database...	0.11	0.03	0.43	3	62474	4	0	4	0	111
ASE_00250	RNaseP_bact_a links to Rfam database...	0.08	0.02	0.30	3	78993	7	0	7	0	128
ASE_00251	RNaseP_nuc links to Rfam database...	0.00	0.00	0.00	0	17766	0	0	0	0	43
ASE_00252	RNaseP_bact_a links to Rfam database...	0.00	0.00	0.00	0	115437	4	0	3	1	168
ASE_00254	RNaseP_bact_a links to Rfam database...	0.00	0.00	0.00	0	36850	6	1	5	0	82
ASE_00255	RNaseP_bact_a links to Rfam database...	0.12	0.03	0.50	4	74683	4	0	4	0	126
ASE_00257	RNaseP_bact_a links to Rfam database...	0.00	0.00	0.00	0	51035	5	0	5	0	97
ASE_00258	RNaseP_nuc links to Rfam database...	0.00	0.00	0.00	0	26796	0	0	0	0	54
ASE_00259	RNaseP_bact_a links to Rfam database...	0.11	0.02	0.50	3	73147	3	0	3	0	118
ASE_00263	RNaseP_bact_a links to Rfam database...	0.00	0.00	0.00	0	70490	10	0	10	0	120
ASE_00264	RNaseP_nuc links to Rfam database...	0.12	0.02	0.67	2	49138	3	0	1	2	98
ASE_00267	RNaseP_bact_a links to Rfam database...	0.00	0.00	0.00	0	45145	6	0	5	1	88
ASE_00270	RNaseP_bact_a links to Rfam database...	0.00	0.00	0.00	0	72388	3	0	2	1	128
ASE_00274	RNaseP_bact_a links to Rfam database...	0.00	0.00	0.00	0	55608	3	0	3	0	103
ASE_00277	RNaseP_bact_a links to Rfam database...	0.00	0.00	0.00	0	48203	2	0	2	0	91
ASE_00279	RNaseP_bact_a links to Rfam database...	0.00	0.00	0.00	0	53299	2	0	2	0	101
ASE_00280	RNaseP_bact_a links to Rfam database...	0.00	0.00	0.00	0	52001	2	0	2	0	98
ASE_00281	RNaseP_bact_a links to Rfam database...	0.00	0.00	0.00	0	44548	3	0	3	0	88
ASE_00282	RNaseP_bact_a links to Rfam database...	0.00	0.00	0.00	0	77811	4	0	4	0	127
ASE_00283	RNaseP_bact_a links to Rfam database...	0.00	0.00	0.00	0	61769	7	0	7	0	107
ASE_00284	RNaseP_bact_a links to Rfam database...	0.00	0.00	0.00	0	58309	2	1	1	0	108
ASE_00285	RNaseP_bact_a links to Rfam database...	0.00	0.00	0.00	0	69000	6	0	6	0	122
ASE_00286	RNaseP_bact_a links to Rfam database...	0.00	0.00	0.00	0	46659	6	0	6	0	92
ASE_00287	RNaseP_bact_a links to Rfam database...	0.00	0.00	0.00	0	54939	7	0	7	0	103
ASE_00288	RNaseP_bact_a links to Rfam database...	0.10	0.02	0.50	2	46052	2	0	2	0	91
ASE_00289	RNaseP_bact_a links to Rfam database...	0.05	0.01	0.18	2	101014	10	1	8	1	155
ASE_00292	RNaseP_bact_a links to Rfam database...	0.15	0.04	0.50	6	81798	6	0	6	0	132
ASE_00294	RNaseP_bact_a links to Rfam database...	0.08	0.02	0.31	4	114468	9	0	9	0	167
ASE_00295	RNaseP_bact_a links to Rfam database...	0.00	0.00	0.00	0	73909	11	0	11	0	131
ASE_00296	RNaseP_bact_a links to Rfam database...	0.09	0.03	0.29	4	91792	10	1	9	0	141
ASE_00297	RNaseP_bact_a links to Rfam database...	0.00	0.00	0.00	0	52972	3	0	3	0	98
ASE_00298	RNaseP_bact_a links to Rfam database...	0.00	0.00	0.00	0	67525	3	1	2	0	113
ASE_00299	RNaseP_bact_a links to Rfam database...	0.00	0.00	0.00	0	49451	5	0	4	1	100
ASE_00303	RNaseP_nuc links to Rfam database...	0.00	0.00	0.00	0	67895	1	0	1	0	95
ASE_00305	RNaseP_bact_b links to Rfam database...	0.00	0.00	0.00	0	54596	22	4	15	3	85
ASE_00313	RNaseP_nuc links to Rfam database...	0.00	0.00	0.00	0	62479	4	0	2	2	89
ASE_00316	RNaseP_nuc links to Rfam database...	0.00	0.00	0.00	0	107880	0	0	0	0	98
ASE_00318	RNaseP_bact_b links to Rfam database...	0.00	0.00	0.00	0	80184	21	0	16	5	118
ASE_00321	RNaseP_bact_b links to Rfam database...	0.00	0.00	0.00	0	54597	21	1	17	3	88
ASE_00327	RNaseP_nuc links to Rfam database...	0.00	0.00	0.00	0	57285	6	1	5	0	89
ASE_00328	RNaseP_bact_b links to Rfam database...	0.00	0.00	0.00	0	72760	15	0	11	4	112
ASE_00329	RNaseP_nuc links to Rfam database...	0.00	0.00	0.00	0	40755	0	0	0	0	63
ASE_00330	RNaseP_nuc links to Rfam database...	0.00	0.00	0.00	0	56277	3	0	3	0	90
ASE_00332	RNaseP_bact_a links to Rfam database...	0.15	0.04	0.50	6	81798	6	0	6	0	132
ASE_00335	RNaseP_bact_b links to Rfam database...	0.00	0.00	0.00	0	75451	19	1	14	4	116
ASE_00337	RNaseP_nuc links to Rfam database...	0.00	0.00	0.00	0	39340	2	0	0	2	71
ASE_00338	RNaseP_nuc links to Rfam database...	0.00	0.00	0.00	0	66427	3	0	3	0	98
ASE_00339	RNaseP_bact_a links to Rfam database...	0.00	0.00	0.00	0	80192	8	0	8	0	119
ASE_00340	RNaseP_bact_a links to Rfam database...	0.04	0.01	0.14	1	46049	6	0	6	0	84
ASE_00342	RNaseP_bact_a links to Rfam database...	0.09	0.03	0.30	3	62471	7	0	7	0	112
ASE_00343	RNaseP_bact_a links to Rfam database...	0.00	0.00	0.00	0	83429	8	1	6	1	113
ASE_00346	RNaseP_arch links to Rfam database...	0.00	0.00	0.00	0	48205	0	0	0	0	97
ASE_00353	RNaseP_bact_a links to Rfam database...	0.00	0.00	0.00	0	57968	2	0	2	0	107
ASE_00359	RNaseP_arch links to Rfam database...	0.00	0.00	0.00	0	42778	0	0	0	0	80
ASE_00360	RNaseP_arch links to Rfam database...	0.00	0.00	0.00	0	29403	0	0	0	0	65
ASE_00361	RNaseP_bact_a links to Rfam database...	0.00	0.00	0.00	0	75463	3	0	3	0	127
ASE_00362	RNaseP_bact_a links to Rfam database...	0.00	0.00	0.00	0	48200	5	0	5	0	91
ASE_00363	RNaseP_bact_a links to Rfam database...	0.00	0.00	0.00	0	51354	6	0	6	0	94
ASE_00364	RNaseP_bact_a links to Rfam database...	0.11	0.02	0.67	2	54282	1	0	1	0	103
ASE_00366	RNaseP_bact_a links to Rfam database...	0.00	0.00	0.00	0	58652	1	0	1	0	98
ASE_00367	RNaseP_bact_a links to Rfam database...	0.00	0.00	0.00	0	43067	5	0	4	1	86
ASE_00369	RNaseP_bact_a links to Rfam database...	0.00	0.00	0.00	0	55939	6	1	5	0	107
ASE_00370	RNaseP_bact_a links to Rfam database...	0.10	0.02	0.40	2	41900	3	0	3	0	82
ASE_00372	RNaseP_bact_a links to Rfam database...	0.00	0.00	0.00	0	51997	6	0	6	0	100
ASE_00374	RNaseP_bact_a links to Rfam database...	0.00	0.00	0.00	0	44843	7	0	7	0	88
ASE_00375	RNaseP_bact_a links to Rfam database...	0.00	0.00	0.00	0	60373	5	0	5	0	110
ASE_00376	RNaseP_bact_a links to Rfam database...	0.04	0.01	0.17	1	56947	5	0	5	0	104
ASE_00377	RNaseP_bact_a links to Rfam database...	0.00	0.00	0.00	0	57628	2	0	2	0	107
ASE_00379	RNaseP_bact_a links to Rfam database...	0.00	0.00	0.00	0	46050	7	0	6	1	89
ASE_00380	RNaseP_bact_a links to Rfam database...	0.00	0.00	0.00	0	54942	4	2	2	0	99
ASE_00382	RNaseP_bact_a links to Rfam database...	0.06	0.01	0.33	1	41902	3	0	2	1	83
ASE_00383	RNaseP_bact_a links to Rfam database...	0.06	0.01	0.33	1	54612	2	0	2	0	104
ASE_00384	RNaseP_bact_a links to Rfam database...	0.05	0.01	0.20	1	48511	4	0	4	0	91
ASE_00385	RNaseP_bact_a links to Rfam database...	0.00	0.00	0.00	0	41902	3	0	3	0	81
ASE_00386	RNaseP_bact_a links to Rfam database...	0.10	0.03	0.33	3	50394	7	0	6	1	93
ASE_00387	RNaseP_bact_a links to Rfam database...	0.00	0.00	0.00	0	55940	5	0	5	0	104
ASE_00388	RNaseP_bact_a links to Rfam database...	0.00	0.00	0.00	0	45749	5	0	4	1	89
ASE_00390	RNaseP_bact_a links to Rfam database...	0.00	0.00	0.00	0	42192	4	0	3	1	85
ASE_00393	RNaseP_bact_a links to Rfam database...	0.00	0.00	0.00	0	47891	4	0	4	0	93
ASE_00394	RNaseP_bact_a links to Rfam database...	0.03	0.01	0.07	1	46956	15	0	14	1	92
ASE_00395	RNaseP_bact_a links to Rfam database...	0.00	0.00	0.00	0	41612	6	0	4	2	84
ASE_00396	RNaseP_bact_a links to Rfam database...	0.15	0.04	0.60	3	41611	2	0	2	0	80
ASE_00397	RNaseP_bact_a links to Rfam database...	0.04	0.01	0.17	1	54609	5	1	4	0	104
ASE_00398	RNaseP_bact_a links to Rfam database...	0.00	0.00	0.00	0	55934	11	0	11	0	104
ASE_00400	RNaseP_bact_a links to Rfam database...	0.08	0.02	0.33	2	57964	4	3	1	0	104
ASE_00401	RNaseP_bact_a links to Rfam database...	0.00	0.00	0.00	0	77015	13	0	13	0	126
ASE_00402	RNaseP_bact_a links to Rfam database...	0.05	0.01	0.25	1	42482	3	0	3	0	84
ASE_00403	RNaseP_bact_a links to Rfam database...	0.00	0.00	0.00	0	55941	4	0	4	0	107
ASE_00404	RNaseP_bact_a links to Rfam database...	0.00	0.00	0.00	0	43065	9	0	6	3	85
ASE_00406	RNaseP_bact_a links to Rfam database...	0.00	0.00	0.00	0	48823	6	0	5	1	94
ASE_00411	RNaseP_bact_a links to Rfam database...	0.11	0.02	0.50	2	49451	2	0	2	0	87
ASE_00412	RNaseP_bact_a links to Rfam database...	0.04	0.01	0.17	1	58305	5	1	4	0	104
ASE_00413	RNaseP_bact_a links to Rfam database...	0.00	0.00	0.00	0	44546	5	0	5	0	81
ASE_00414	RNaseP_bact_a links to Rfam database...	0.00	0.00	0.00	0	46359	1	0	1	0	95
ASE_00415	RNaseP_bact_a links to Rfam database...	0.00	0.00	0.00	0	54941	5	1	4	0	103
ASE_00416	RNaseP_bact_a links to Rfam database...	0.00	0.00	0.00	0	77412	9	0	9	0	127
ASE_00417	RNaseP_arch links to Rfam database...	0.00	0.00	0.00	0	54615	0	0	0	0	100
ASE_00418	RNaseP_arch links to Rfam database...	0.00	0.00	0.00	0	38781	0	0	0	0	75
ASE_00419	RNaseP_bact_a links to Rfam database...	0.10	0.03	0.33	3	54937	6	0	6	0	100
ASE_00420	RNaseP_nuc links to Rfam database...	0.00	0.00	0.00	0	43365	0	0	0	0	63
ASE_00422	RNaseP_bact_a links to Rfam database...	0.05	0.02	0.12	2	46954	19	1	14	4	92
ASE_00423	RNaseP_bact_a links to Rfam database...	0.14	0.04	0.50	4	56945	4	0	4	0	105
ASE_00426	RNaseP_bact_a links to Rfam database...	0.11	0.04	0.31	4	61062	9	0	9	0	104
ASE_00427	RNaseP_nuc links to Rfam database...	0.00	0.00	0.00	0	40755	0	0	0	0	46
ASE_00428	RNaseP_bact_a links to Rfam database...	0.00	0.00	0.00	0	76629	8	0	7	1	125
ASE_00430	RNaseP_bact_a links to Rfam database...	0.07	0.02	0.25	2	46963	6	0	6	0	95
ASE_00431	RNaseP_bact_a links to Rfam database...	0.00	0.00	0.00	0	46358	2	0	2	0	95
ASE_00434	RNaseP_bact_b links to Rfam database...	0.04	0.02	0.11	2	68246	20	1	16	3	108
ASE_00437	RNaseP_bact_a links to Rfam database...	0.00	0.00	0.00	0	79395	7	0	6	1	135
ASE_00438	RNaseP_bact_a links to Rfam database...	0.02	0.01	0.07	1	66052	13	2	11	0	115
ASE_00441	RNaseP_bact_a links to Rfam database...	0.00	0.00	0.00	0	64258	3	0	3	0	112
ASE_00443	RNaseP_nuc links to Rfam database...	0.00	0.00	0.00	0	26794	2	0	2	0	50
ASE_00447	RNaseP_bact_a links to Rfam database...	0.15	0.03	0.67	4	60372	2	0	2	0	112
ASE_00448	RNaseP_bact_a links to Rfam database...	0.04	0.01	0.14	1	64254	6	1	5	0	111
ASE_00451	RNaseP_bact_a links to Rfam database...	0.11	0.03	0.36	4	70865	7	0	7	0	121
ASE_00454	RNaseP_nuc links to Rfam database...	0.00	0.00	0.00	0	43365	0	0	0	0	63
CRW_00013	Intron_gpI links to Rfam database...	0.00	0.00	0.00	0	103737	3	0	3	0	115
CRW_00016	Intron_gpI links to Rfam database...	0.00	0.00	0.00	0	77418	3	0	3	0	120
CRW_00024	SSU_rRNA_archaea links to Rfam database...	0.78	0.76	0.80	346	1085169	116	15	71	30	112
CRW_00048	SSU_rRNA_bacteria links to Rfam database...	0.65	0.57	0.74	268	1170853	120	15	79	26	202
CRW_00054	SSU_rRNA_bacteria links to Rfam database...	0.66	0.59	0.75	269	1107457	114	15	75	24	187
CRW_00059	SSU_rRNA_bacteria links to Rfam database...	0.63	0.54	0.73	257	1172394	120	18	77	25	216
CRW_00061	SSU_rRNA_bacteria links to Rfam database...	0.62	0.54	0.72	258	1181594	124	19	82	23	218
CRW_00068	SSU_rRNA_bacteria links to Rfam database...	0.65	0.57	0.75	261	1108955	113	16	73	24	196
CRW_00096	SSU_rRNA_bacteria links to Rfam database...	0.66	0.57	0.75	267	1178524	119	14	75	30	198
CRW_00140	SSU_rRNA_bacteria links to Rfam database...	0.67	0.59	0.76	273	1135921	112	13	71	28	190
CRW_00141	SSU_rRNA_bacteria links to Rfam database...	0.63	0.55	0.72	260	1201662	126	16	87	23	216
CRW_00150	SSU_rRNA_bacteria links to Rfam database...	0.66	0.58	0.74	270	1152558	117	19	74	24	196
CRW_00152	SSU_rRNA_bacteria links to Rfam database...	0.63	0.54	0.74	252	1180075	110	15	74	21	219
CRW_00166	SSU_rRNA_bacteria links to Rfam database...	0.64	0.55	0.74	258	1190849	118	11	78	29	210
CRW_00173	SSU_rRNA_bacteria links to Rfam database...	0.62	0.55	0.71	243	1082316	119	17	80	22	202
CRW_00177	SSU_rRNA_bacteria links to Rfam database...	0.67	0.58	0.77	274	1178524	103	15	67	21	199
CRW_00196	SSU_rRNA_bacteria links to Rfam database...	0.63	0.54	0.73	257	1207883	117	16	79	22	218
CRW_00230	SSU_rRNA_bacteria links to Rfam database...	0.62	0.54	0.71	257	1198565	127	16	88	23	221
CRW_00245	SSU_rRNA_bacteria links to Rfam database...	0.63	0.55	0.72	248	1105984	121	17	79	25	205
CRW_00248	SSU_rRNA_bacteria links to Rfam database...	0.65	0.57	0.75	278	1218768	123	17	78	28	206
CRW_00250	SSU_rRNA_bacteria links to Rfam database...	0.67	0.60	0.74	285	1198543	124	18	80	26	193
CRW_00256	SSU_rRNA_bacteria links to Rfam database...	0.62	0.54	0.72	251	1192392	119	17	80	22	217
CRW_00270	SSU_rRNA_bacteria links to Rfam database...	0.64	0.56	0.74	255	1111941	113	15	75	23	200
CRW_00271	SSU_rRNA_bacteria links to Rfam database...	0.62	0.53	0.73	243	1122417	115	15	76	24	219
CRW_00273	SSU_rRNA_bacteria links to Rfam database...	0.64	0.56	0.73	250	1085260	113	15	76	22	196
CRW_00275	SSU_rRNA_bacteria links to Rfam database...	0.63	0.54	0.72	249	1114926	120	15	81	24	208
CRW_00277	SSU_rRNA_bacteria links to Rfam database...	0.61	0.52	0.72	235	1110468	113	17	75	21	218
CRW_00280	SSU_rRNA_bacteria links to Rfam database...	0.61	0.53	0.70	240	1117918	122	15	87	20	213
CRW_00281	SSU_rRNA_bacteria links to Rfam database...	0.65	0.56	0.74	260	1144991	117	12	78	27	204
CRW_00283	SSU_rRNA_bacteria links to Rfam database...	0.53	0.42	0.68	180	1015761	96	14	70	12	252
CRW_00289	SSU_rRNA_bacteria links to Rfam database...	0.60	0.50	0.70	240	1189312	122	16	85	21	236
CRW_00292	SSU_rRNA_bacteria links to Rfam database...	0.55	0.43	0.72	196	1123976	99	12	66	21	265
CRW_00306	SSU_rRNA_eukarya links to Rfam database...	0.00	0.00	0.00	0	1445558	306	53	239	14	462
CRW_00366	SSU_rRNA_eukarya links to Rfam database...	0.00	0.00	0.00	0	1579464	301	50	239	12	482
CRW_00371	SSU_rRNA_eukarya links to Rfam database...	0.00	0.00	0.00	0	1611598	319	50	262	7	496
CRW_00379	SSU_rRNA_eukarya links to Rfam database...	0.00	0.00	0.00	0	2126581	414	77	295	42	534
CRW_00411	SSU_rRNA_eukarya links to Rfam database...	0.00	0.00	0.00	0	1615206	309	45	252	12	496
CRW_00414	SSU_rRNA_eukarya links to Rfam database...	0.00	0.00	0.00	0	1665933	312	53	239	20	495
CRW_00466	SSU_rRNA_bacteria links to Rfam database...	0.64	0.55	0.74	252	1116423	114	13	77	24	206
CRW_00589	SSU_rRNA_bacteria links to Rfam database...	0.63	0.53	0.74	236	1094141	110	9	74	27	209
CRW_00590	SSU_rRNA_bacteria links to Rfam database...	0.64	0.54	0.76	245	1119432	103	8	71	24	207
CRW_00591	SSU_rRNA_bacteria links to Rfam database...	0.66	0.58	0.76	258	1098562	118	11	72	35	188
CRW_00610	Intron_gpI links to Rfam database...	0.00	0.00	0.00	0	36310	5	0	5	0	81
CRW_00613	Intron_gpI links to Rfam database...	0.00	0.00	0.00	0	34979	1	0	1	0	78
CRW_00614	Intron_gpI links to Rfam database...	0.00	0.00	0.00	0	121764	17	0	7	10	57
CRW_00618	Intron_gpI links to Rfam database...	0.00	0.00	0.00	0	56279	1	0	1	0	61
CRW_00619	Intron_gpI links to Rfam database...	0.00	0.00	0.00	0	165014	28	5	6	17	73
CRW_00620	Intron_gpI links to Rfam database...	0.00	0.00	0.00	0	150964	27	4	7	16	63
CRW_00621	Intron_gpI links to Rfam database...	0.00	0.00	0.00	0	153172	32	5	4	23	71
CRW_00623	Intron_gpI links to Rfam database...	0.00	0.00	0.00	0	129777	25	6	12	7	83
CRW_00633	Intron_gpI links to Rfam database...	0.00	0.00	0.00	0	63541	5	0	5	0	106
CRW_00634	Intron_gpI links to Rfam database...	0.00	0.00	0.00	0	64620	1	0	0	1	94
CRW_00670	Intron_gpI links to Rfam database...	0.00	0.00	0.00	0	70124	4	0	1	3	120
CRW_00671	Intron_gpI links to Rfam database...	0.00	0.00	0.00	0	62835	0	0	0	0	117
CRW_00672	Intron_gpI links to Rfam database...	0.00	0.00	0.00	0	72386	7	0	4	3	111
CRW_00674	Intron_gpI links to Rfam database...	0.00	0.00	0.00	0	83436	1	0	0	1	124
CRW_00676	Intron_gpI links to Rfam database...	0.00	0.00	0.00	0	93527	2	0	1	1	115
CRW_00692	Intron_gpI links to Rfam database...	0.00	0.00	0.00	0	68635	3	0	0	3	90
CRW_00759	SSU_rRNA_eukarya links to Rfam database...	0.00	0.00	0.00	1	1636859	310	50	235	25	480
CRW_00763	SSU_rRNA_bacteria links to Rfam database...	0.62	0.49	0.79	217	1215744	86	5	54	27	229
CRW_00778	SSU_rRNA_bacteria links to Rfam database...	0.59	0.48	0.73	185	1201773	99	7	60	32	199
CRW_00789	SSU_rRNA_bacteria links to Rfam database...	0.64	0.56	0.74	249	1137451	114	13	73	28	198
CRW_00795	SSU_rRNA_bacteria links to Rfam database...	0.58	0.47	0.72	184	1152666	117	7	64	46	210
CRW_00849	SSU_rRNA_bacteria links to Rfam database...	0.60	0.49	0.73	232	1117943	100	11	74	15	238
CRW_00997	SSU_rRNA_bacteria links to Rfam database...	0.63	0.55	0.72	256	1135921	123	14	87	22	208
CRW_01153	SSU_rRNA_eukarya links to Rfam database...	0.00	0.00	0.00	0	1606225	319	65	238	16	503
CRW_01171	SSU_rRNA_eukarya links to Rfam database...	0.00	0.00	0.00	0	1593701	318	50	254	14	506
CRW_01343	SSU_rRNA_archaea links to Rfam database...	0.52	0.41	0.68	177	977639	95	12	73	10	257
PDB_00005	Tymo_tRNA-like links to Rfam database...	0.71	0.57	0.89	8	937	1	0	1	0	6
PDB_00012	mir-TAR links to Rfam database...	1.00	1.00	1.00	7	399	1	0	0	1	0
PDB_00213	Gammaretro_CES links to Rfam database...	0.56	0.49	0.65	20	5019	11	0	11	0	21
PDB_00553	mir-TAR links to Rfam database...	0.90	0.82	1.00	9	456	0	0	0	0	2
PDB_00703	SSU_rRNA_bacteria links to Rfam database...	0.63	0.53	0.76	261	1073500	115	11	73	31	234
PDB_00716	HDV_ribozyme links to Rfam database...	0.59	0.48	0.73	11	2686	4	0	4	0	12
PDB_00741	Entero_5_CRE links to Rfam database...	0.00	0.00	0.00	0	703	0	0	0	0	17
PDB_00810	s2m links to Rfam database...	0.80	0.65	1.00	11	1070	0	0	0	0	6
PDB_00827	Intron_gpI links to Rfam database...	0.00	0.00	0.00	0	27026	2	0	2	0	81
PDB_00828	Purine links to Rfam database...	0.54	0.41	0.73	11	2470	4	2	2	0	16
PDB_00829	Purine links to Rfam database...	0.74	0.63	0.88	15	2261	2	2	0	0	9
PDB_00854	SSU_rRNA_bacteria links to Rfam database...	0.60	0.48	0.76	259	1500435	126	9	75	42	276
PDB_00876	HIV_FE links to Rfam database...	0.57	0.50	0.67	10	975	5	0	5	0	10
PDB_00919	RNaseP_bact_a links to Rfam database...	0.00	0.00	0.00	0	44249	5	0	4	1	103
PDB_01001	tRNA links to Rfam database...	0.00	0.00	0.00	0	2144	1	0	1	0	18
PDB_01020	Purine links to Rfam database...	0.76	0.65	0.88	15	2261	2	2	0	0	8
PDB_01050	UnaL2 links to Rfam database...	0.62	0.46	0.86	6	623	2	0	1	1	7
PDB_01051	Telomerase-cil links to Rfam database...	-0.01	0.00	0.00	0	899	4	2	2	0	13
PDB_01073	SAM links to Rfam database...	0.39	0.18	0.86	6	4364	1	0	1	0	28
PDB_01088	SSU_rRNA_bacteria links to Rfam database...	0.60	0.47	0.76	259	1471129	122	8	74	40	288
PDB_01092	glmS links to Rfam database...	0.48	0.37	0.63	19	10123	13	1	10	2	33
PDB_01103	SSU_rRNA_bacteria links to Rfam database...	0.60	0.47	0.76	266	1606178	119	12	72	35	296
PDB_01105	SSU_rRNA_bacteria links to Rfam database...	0.61	0.50	0.76	268	1433617	119	7	79	33	272
PDB_01114	TPP links to Rfam database...	0.74	0.56	1.00	15	2835	0	0	0	0	12
PDB_01120	SSU_rRNA_bacteria links to Rfam database...	0.64	0.53	0.78	280	1204768	120	9	71	40	247
PDB_01152	HIV_FS2 links to Rfam database...	0.88	0.79	1.00	11	550	0	0	0	0	3
PDB_01236	ykoK links to Rfam database...	0.00	0.00	0.00	0	11621	7	0	7	0	54
PDB_01273	SSU_rRNA_bacteria links to Rfam database...	0.65	0.55	0.76	272	1117903	116	13	72	31	219
RFA_00389	Hammerhead_3 links to Rfam database...	0.63	0.40	1.00	6	1425	1	0	0	1	9
RFA_00390	Hammerhead_3 links to Rfam database...	0.63	0.40	1.00	6	1425	1	0	0	1	9
RFA_00391	Hammerhead_3 links to Rfam database...	0.63	0.40	1.00	6	1425	1	0	0	1	9
RFA_00396	Hammerhead_3 links to Rfam database...	0.63	0.40	1.00	6	1425	1	0	0	1	9
RFA_00402	Hammerhead_3 links to Rfam database...	0.63	0.40	1.00	6	1425	0	0	0	0	9
RFA_00409	Hammerhead_3 links to Rfam database...	0.58	0.33	1.00	5	1426	1	0	0	1	10
RFA_00416	Hammerhead_3 links to Rfam database...	0.63	0.40	1.00	6	1479	1	0	0	1	9
RFA_00425	Hammerhead_3 links to Rfam database...	0.63	0.40	1.00	6	1647	0	0	0	0	9
RFA_00427	Hammerhead_3 links to Rfam database...	0.00	0.00	0.00	0	1482	3	0	3	0	15
RFA_00433	Hammerhead_3 links to Rfam database...	0.63	0.40	1.00	6	1425	1	0	0	1	9
RFA_00434	Hammerhead_3 links to Rfam database...	0.63	0.40	1.00	6	1425	1	0	0	1	9
RFA_00436	Hammerhead_3 links to Rfam database...	0.63	0.40	1.00	6	1425	1	0	0	1	9
RFA_00440	Hammerhead_3 links to Rfam database...	0.63	0.40	1.00	6	1479	1	0	0	1	9
RFA_00442	Hammerhead_3 links to Rfam database...	0.63	0.40	1.00	6	1425	1	0	0	1	9
RFA_00444	Hammerhead_3 links to Rfam database...	0.00	0.00	0.00	0	1538	2	0	2	0	15
RFA_00446	Hammerhead_3 links to Rfam database...	-0.01	0.00	0.00	0	1481	4	0	4	0	15
RFA_00449	Hammerhead_3 links to Rfam database...	-0.01	0.00	0.00	0	1481	4	0	4	0	15
RFA_00582	Y_RNA links to Rfam database...	1.00	1.00	1.00	15	5980	4	0	0	4	0
RFA_00583	Y_RNA links to Rfam database...	1.00	1.00	1.00	15	4935	7	0	0	7	0
RFA_00584	Y_RNA links to Rfam database...	1.00	1.00	1.00	15	2911	2	0	0	2	0
RFA_00585	Y_RNA links to Rfam database...	1.00	1.00	1.00	15	4836	6	0	0	6	0
RFA_00586	Y_RNA links to Rfam database...	0.97	0.93	1.00	14	3902	2	0	0	2	1
RFA_00587	Y_RNA links to Rfam database...	1.00	1.00	1.00	15	4836	4	0	0	4	0
RFA_00588	Y_RNA links to Rfam database...	0.97	0.93	1.00	14	4546	4	0	0	4	1
RFA_00589	Y_RNA links to Rfam database...	0.93	0.87	1.00	13	4358	3	0	0	3	2
RFA_00594	Y_RNA links to Rfam database...	0.93	0.87	1.00	13	2762	2	0	0	2	2
RFA_00596	Y_RNA links to Rfam database...	0.82	0.67	1.00	10	5985	5	0	0	5	5
RFA_00597	Telomerase-vert links to Rfam database...	0.00	0.00	0.00	0	97889	17	4	10	3	109
RFA_00598	Telomerase-vert links to Rfam database...	0.00	0.00	0.00	0	84655	11	0	11	0	101
RFA_00599	Telomerase-vert links to Rfam database...	0.43	0.25	0.74	28	101437	25	0	10	15	83
RFA_00600	Telomerase-vert links to Rfam database...	0.00	0.00	0.00	0	120278	17	1	16	0	100
RFA_00601	Telomerase-vert links to Rfam database...	0.57	0.38	0.86	43	99185	16	1	6	9	71
RFA_00602	Telomerase-vert links to Rfam database...	0.09	0.02	0.50	2	101471	3	1	1	1	114
RFA_00603	Telomerase-cil links to Rfam database...	0.00	0.00	0.00	0	13520	11	2	8	1	35
RFA_00604	Telomerase-cil links to Rfam database...	0.00	0.00	0.00	0	13529	1	0	1	0	35
RFA_00605	Telomerase-cil links to Rfam database...	0.00	0.00	0.00	0	15215	11	2	8	1	35
RFA_00606	Telomerase-cil links to Rfam database...	0.00	0.00	0.00	0	21309	12	3	9	0	39
RFA_00607	Telomerase-cil links to Rfam database...	0.00	0.00	0.00	0	17752	15	0	14	1	36
RFA_00609	Telomerase-cil links to Rfam database...	0.00	0.00	0.00	0	17949	9	1	5	3	37
RFA_00610	Telomerase-cil links to Rfam database...	0.00	0.00	0.00	0	17195	10	3	7	0	37
RFA_00611	Telomerase-cil links to Rfam database...	0.00	0.00	0.00	0	13032	10	0	9	1	35
RFA_00613	Telomerase-cil links to Rfam database...	0.00	0.00	0.00	0	12879	1	0	1	0	35
RFA_00615	Telomerase-cil links to Rfam database...	0.00	0.00	0.00	0	13360	6	0	6	0	35
RFA_00620	Telomerase-cil links to Rfam database...	0.00	0.00	0.00	0	21941	4	0	4	0	39
RFA_00621	RNase_MRP links to Rfam database...	0.00	0.00	0.00	0	46359	1	0	1	0	76
RFA_00623	RNase_MRP links to Rfam database...	0.00	0.00	0.00	0	43955	1	0	1	0	78
RFA_00624	RNase_MRP links to Rfam database...	0.00	0.00	0.00	0	30135	0	0	0	0	61
RFA_00626	rne5 links to Rfam database...	0.90	0.80	1.00	70	56546	12	0	0	12	17
RFA_00627	rne5 links to Rfam database...	0.90	0.82	0.99	71	56881	11	0	1	10	16
RFA_00628	rne5 links to Rfam database...	0.89	0.81	0.97	70	57219	12	0	2	10	16
RFA_00630	rne5 links to Rfam database...	0.85	0.75	0.97	65	56886	11	0	2	9	22
RFA_00632	HDV_ribozyme links to Rfam database...	0.47	0.39	0.58	11	4076	8	3	5	0	17
RFA_00636	HDV_ribozyme links to Rfam database...	0.62	0.54	0.71	15	3984	6	3	3	0	13
RFA_00639	7SK links to Rfam database...	0.59	0.48	0.72	42	54557	30	3	13	14	45
RFA_00642	Vimentin3 links to Rfam database...	0.31	0.22	0.44	4	2917	5	0	5	0	14
RFA_00643	Vimentin3 links to Rfam database...	0.21	0.17	0.27	3	2200	8	0	8	0	15
RFA_00644	Vimentin3 links to Rfam database...	0.36	0.33	0.40	6	2686	9	1	8	0	12
RFA_00645	Vimentin3 links to Rfam database...	0.31	0.28	0.36	5	2401	9	1	8	0	13
RFA_00649	Vimentin3 links to Rfam database...	0.37	0.33	0.43	6	2131	8	0	8	0	12
RFA_00651	Vimentin3 links to Rfam database...	0.32	0.28	0.38	5	2067	8	0	8	0	13
RFA_00653	Vimentin3 links to Rfam database...	0.36	0.33	0.40	6	2130	9	1	8	0	12
RFA_00654	Vimentin3 links to Rfam database...	0.35	0.28	0.45	5	2404	6	0	6	0	13
RFA_00658	Hammerhead_1 links to Rfam database...	0.64	0.57	0.73	8	1117	4	0	3	1	6
RFA_00659	Hammerhead_1 links to Rfam database...	0.35	0.29	0.44	4	1119	6	0	5	1	10
RFA_00664	Hammerhead_1 links to Rfam database...	0.59	0.50	0.70	7	980	4	0	3	1	7
RFA_00667	Hammerhead_1 links to Rfam database...	0.64	0.57	0.73	8	979	4	0	3	1	6
RFA_00668	Hammerhead_1 links to Rfam database...	0.71	0.57	0.89	8	981	1	0	1	0	6
RFA_00672	Hammerhead_1 links to Rfam database...	0.61	0.54	0.70	7	893	3	0	3	0	6
RFA_00673	Hammerhead_1 links to Rfam database...	0.42	0.36	0.50	5	1118	6	0	5	1	9
RFA_00674	Hammerhead_1 links to Rfam database...	0.69	0.64	0.75	9	1116	4	0	3	1	5
RFA_00675	Hammerhead_1 links to Rfam database...	0.62	0.50	0.78	7	981	3	0	2	1	7
RFA_00677	Hammerhead_1 links to Rfam database...	0.72	0.64	0.82	9	979	2	0	2	0	5
RFA_00678	Hammerhead_1 links to Rfam database...	0.43	0.29	0.67	4	940	3	0	2	1	10
RFA_00680	Hammerhead_1 links to Rfam database...	0.69	0.64	0.75	9	1116	4	0	3	1	5
RFA_00684	Hammerhead_1 links to Rfam database...	0.80	0.64	1.00	9	981	1	0	0	1	5
RFA_00685	Hammerhead_1 links to Rfam database...	0.64	0.57	0.73	8	979	4	0	3	1	6
RFA_00695	Hammerhead_1 links to Rfam database...	0.31	0.14	0.67	2	7018	2	0	1	1	12
RFA_00703	Hammerhead_1 links to Rfam database...	0.54	0.36	0.83	5	4272	1	0	1	0	9
RFA_00704	Hammerhead_1 links to Rfam database...	0.35	0.29	0.44	4	981	6	0	5	1	10
RFA_00705	Hammerhead_1 links to Rfam database...	0.80	0.64	1.00	9	1026	1	0	0	1	5
RFA_00706	Hammerhead_1 links to Rfam database...	0.56	0.43	0.75	6	1027	3	0	2	1	8
RFA_00707	Hammerhead_1 links to Rfam database...	0.67	0.57	0.80	8	1025	3	0	2	1	6
RFA_00708	Hammerhead_1 links to Rfam database...	0.75	0.57	1.00	8	1027	1	0	0	1	6
RFA_00709	Hammerhead_1 links to Rfam database...	0.53	0.43	0.67	6	981	3	0	3	0	8
RFA_00710	Hammerhead_1 links to Rfam database...	0.43	0.29	0.67	4	984	2	0	2	0	10
RFA_00711	Hammerhead_1 links to Rfam database...	0.35	0.21	0.60	3	1030	3	0	2	1	11
RFA_00715	Hammerhead_1 links to Rfam database...	0.66	0.50	0.88	7	938	2	0	1	1	7
RFA_00716	Hammerhead_1 links to Rfam database...	0.56	0.43	0.75	6	938	3	0	2	1	8
RFA_00717	Hammerhead_1 links to Rfam database...	0.50	0.36	0.71	5	896	2	0	2	0	9
RFA_00730	s2m links to Rfam database...	0.91	0.83	1.00	10	893	1	0	0	1	2
RFA_00731	s2m links to Rfam database...	0.91	0.83	1.00	10	893	1	0	0	1	2
RFA_00733	s2m links to Rfam database...	0.91	0.83	1.00	10	893	1	0	0	1	2
RFA_00734	s2m links to Rfam database...	0.91	0.83	1.00	10	893	0	0	0	0	2
RFA_00736	s2m links to Rfam database...	0.91	0.83	1.00	10	893	1	0	0	1	2
RFA_00737	s2m links to Rfam database...	0.91	0.83	1.00	10	893	1	0	0	1	2
RFA_00745	s2m links to Rfam database...	0.91	0.83	1.00	10	936	1	0	0	1	2
RFA_00749	s2m links to Rfam database...	0.91	0.83	1.00	10	893	1	0	0	1	2
RFA_00758	s2m links to Rfam database...	0.86	0.75	1.00	9	894	0	0	0	0	3
RFA_00762	s2m links to Rfam database...	0.91	0.83	1.00	10	893	0	0	0	0	2
RFA_00763	s2m links to Rfam database...	0.91	0.83	1.00	10	893	1	0	0	1	2
RFA_00764	s2m links to Rfam database...	0.91	0.83	1.00	10	893	1	0	0	1	2
RFA_00765	s2m links to Rfam database...	0.91	0.83	1.00	10	893	1	0	0	1	2
RFA_00767	Corona_pk3 links to Rfam database...	0.19	0.17	0.23	3	1878	10	3	7	0	15
RFA_00768	Corona_pk3 links to Rfam database...	0.19	0.17	0.23	3	1878	10	3	7	0	15
RFA_00769	Corona_pk3 links to Rfam database...	0.59	0.56	0.63	10	1937	6	4	2	0	8
RFA_00770	Corona_pk3 links to Rfam database...	0.54	0.56	0.53	10	1997	9	6	3	0	8
RFA_00773	Corona_pk3 links to Rfam database...	0.50	0.50	0.50	9	1935	9	6	3	0	9
RFA_00779	Corona_pk3 links to Rfam database...	0.50	0.50	0.50	9	1935	9	6	3	0	9
RFA_00781	Gammaretro_CES links to Rfam database...	0.61	0.59	0.63	19	5020	12	2	9	1	13
RFA_00786	Gammaretro_CES links to Rfam database...	0.61	0.59	0.63	19	5020	12	2	9	1	13
RFA_00791	Gammaretro_CES links to Rfam database...	0.58	0.53	0.63	17	5124	11	2	8	1	15
RFA_00792	Gammaretro_CES links to Rfam database...	0.64	0.63	0.67	20	5020	11	2	8	1	12
RFA_00801	Gammaretro_CES links to Rfam database...	0.59	0.56	0.62	18	5021	12	2	9	1	14
RFA_00805	RNAIII links to Rfam database...	0.27	0.24	0.30	36	133267	84	12	71	1	114
RFA_00808	RydC links to Rfam database...	0.60	0.50	0.73	8	2005	4	0	3	1	8
RFA_00809	RydC links to Rfam database...	0.37	0.31	0.45	5	2134	7	0	6	1	11
RFA_00814	R2_retro_el links to Rfam database...	0.90	0.85	0.95	35	25163	11	0	2	9	6
RFA_00815	R2_retro_el links to Rfam database...	0.90	0.85	0.95	35	24494	10	0	2	8	6
RFA_00816	R2_retro_el links to Rfam database...	0.90	0.85	0.95	35	23183	8	0	2	6	6
RFA_00817	R2_retro_el links to Rfam database...	0.88	0.83	0.94	34	21909	7	0	2	5	7
RFA_00818	R2_retro_el links to Rfam database...	0.80	0.71	0.91	29	20269	10	0	3	7	12
RFA_00819	R2_retro_el links to Rfam database...	0.90	0.85	0.95	35	27929	13	0	2	11	6
RFA_00820	bicoid_3 links to Rfam database...	0.90	0.88	0.93	140	151374	29	1	10	18	20
RFA_00830	bicoid_3 links to Rfam database...	0.39	0.27	0.59	41	152558	37	3	26	8	113
SPR_00020	tRNA links to Rfam database...	0.00	0.00	0.00	0	2696	5	0	5	0	20
SPR_00023	tRNA links to Rfam database...	0.00	0.00	0.00	0	2846	5	0	4	1	21
SPR_00137	tRNA links to Rfam database...	0.00	0.00	0.00	0	2924	2	0	2	0	21
SPR_00273	tRNA links to Rfam database...	0.00	0.00	0.00	0	2846	4	0	4	0	21
SPR_00277	tRNA links to Rfam database...	0.00	0.00	0.00	0	2923	4	0	3	1	21
SPR_00394	tRNA links to Rfam database...	0.00	0.00	0.00	0	3649	7	0	6	1	21
SPR_00402	tRNA links to Rfam database...	0.00	0.00	0.00	0	2552	4	0	4	0	21
SPR_00721	tRNA links to Rfam database...	0.00	0.00	0.00	0	2923	3	0	3	0	21
SPR_00816	tRNA links to Rfam database...	0.00	0.00	0.00	0	3484	2	0	2	0	20
SPR_01157	tRNA links to Rfam database...	0.00	0.00	0.00	0	2774	1	0	1	0	21
SRP_00001	Bacteria_large_SRP links to Rfam database...	0.63	0.50	0.80	20	6761	5	1	4	0	20
SRP_00002	Metazoa_SRP links to Rfam database...	0.51	0.35	0.75	36	45102	13	0	12	1	66
SRP_00006	Metazoa_SRP links to Rfam database...	0.51	0.36	0.72	36	45703	15	0	14	1	65
SRP_00008	Bacteria_small_SRP links to Rfam database...	0.00	0.00	0.00	0	2921	5	1	4	0	25
SRP_00009	Plant_SRP links to Rfam database...	0.09	0.06	0.15	6	46626	34	1	32	1	96
SRP_00011	Plant_SRP links to Rfam database...	0.45	0.33	0.63	34	46306	21	1	19	1	70
SRP_00012	Plant_SRP links to Rfam database...	0.11	0.07	0.17	7	46319	35	2	32	1	94
SRP_00015	Plant_SRP links to Rfam database...	0.11	0.07	0.18	7	46320	34	1	32	1	92
SRP_00016	Archaea_SRP links to Rfam database...	0.58	0.41	0.82	45	47840	11	0	10	1	64
SRP_00018	Fungi_SRP links to Rfam database...	0.00	0.00	0.00	0	38497	6	1	5	0	81
SRP_00019	Fungi_SRP links to Rfam database...	0.00	0.00	0.00	0	36042	4	3	1	0	91
SRP_00020	Bacteria_small_SRP links to Rfam database...	0.38	0.24	0.62	8	5552	5	0	5	0	25
SRP_00024	Bacteria_large_SRP links to Rfam database...	0.53	0.45	0.64	39	37614	23	4	18	1	48
SRP_00026	Bacteria_large_SRP links to Rfam database...	0.60	0.55	0.67	48	36784	25	4	20	1	40
SRP_00027	Bacteria_large_SRP links to Rfam database...	0.59	0.53	0.66	46	37058	24	4	20	0	41
SRP_00030	Bacteria_large_SRP links to Rfam database...	0.64	0.58	0.71	51	36784	21	4	17	0	37
SRP_00031	Bacteria_large_SRP links to Rfam database...	0.63	0.57	0.70	51	36242	22	4	18	0	38
SRP_00037	Bacteria_large_SRP links to Rfam database...	0.66	0.60	0.73	52	36514	19	4	15	0	35
SRP_00038	Bacteria_small_SRP links to Rfam database...	0.35	0.21	0.58	7	5038	5	1	4	0	26
SRP_00040	Bacteria_small_SRP links to Rfam database...	0.24	0.16	0.36	5	5551	9	2	7	0	26
SRP_00042	Bacteria_small_SRP links to Rfam database...	0.00	0.00	0.00	0	3997	8	0	8	0	25
SRP_00043	Bacteria_small_SRP links to Rfam database...	0.53	0.38	0.73	11	5035	5	0	4	1	18
SRP_00044	Bacteria_small_SRP links to Rfam database...	0.00	0.00	0.00	0	6095	11	1	9	1	32
SRP_00046	Bacteria_small_SRP links to Rfam database...	0.33	0.19	0.60	6	4743	4	1	3	0	26
SRP_00050	Metazoa_SRP links to Rfam database...	0.56	0.43	0.72	43	44790	17	0	17	0	56
SRP_00051	Bacteria_small_SRP links to Rfam database...	0.00	0.00	0.00	0	5448	12	1	11	0	30
SRP_00053	Metazoa_SRP links to Rfam database...	0.17	0.12	0.25	11	45106	33	2	31	0	83
SRP_00054	Bacteria_small_SRP links to Rfam database...	0.00	0.00	0.00	0	5555	10	1	9	0	32
SRP_00056	Bacteria_small_SRP links to Rfam database...	0.04	0.03	0.07	1	6426	14	3	11	0	36
SRP_00057	Bacteria_small_SRP links to Rfam database...	0.21	0.11	0.40	4	6318	6	0	6	0	31
SRP_00058	Bacteria_small_SRP links to Rfam database...	0.31	0.18	0.55	6	5767	6	0	5	1	28
SRP_00060	Metazoa_SRP links to Rfam database...	0.42	0.28	0.64	28	44507	16	0	16	0	72
SRP_00061	Metazoa_SRP links to Rfam database...	0.44	0.31	0.62	31	44800	19	1	18	0	69
SRP_00066	Metazoa_SRP links to Rfam database...	0.54	0.41	0.72	41	45394	16	0	16	0	59
SRP_00067	Bacteria_small_SRP links to Rfam database...	0.00	0.00	0.00	0	5768	10	0	10	0	38
SRP_00069	Fungi_SRP links to Rfam database...	0.10	0.04	0.30	3	34443	9	0	7	2	82
SRP_00070	Fungi_SRP links to Rfam database...	0.14	0.05	0.40	6	126741	11	5	4	2	115
SRP_00072	Bacteria_small_SRP links to Rfam database...	0.00	0.00	0.00	0	6320	8	4	4	0	29
SRP_00073	Fungi_SRP links to Rfam database...	0.12	0.04	0.33	3	39051	8	2	4	2	68
SRP_00074	Bacteria_small_SRP links to Rfam database...	0.00	0.00	0.00	0	6548	7	1	6	0	29
SRP_00075	Bacteria_small_SRP links to Rfam database...	0.00	0.00	0.00	0	5557	9	1	7	1	34
SRP_00077	Bacteria_small_SRP links to Rfam database...	0.00	0.00	0.00	0	6660	10	1	9	0	37
SRP_00079	Plant_SRP links to Rfam database...	0.10	0.06	0.17	5	41875	26	2	23	1	83
SRP_00081	Bacteria_small_SRP links to Rfam database...	0.29	0.19	0.43	6	5551	8	1	7	0	25
SRP_00084	Bacteria_small_SRP links to Rfam database...	0.34	0.21	0.58	7	5448	5	1	4	0	27
SRP_00085	Plant_SRP links to Rfam database...	0.47	0.35	0.65	35	45397	21	2	17	2	66
SRP_00086	Metazoa_SRP links to Rfam database...	0.52	0.40	0.69	40	44195	18	0	18	0	60
SRP_00087	Fungi_SRP links to Rfam database...	0.25	0.10	0.60	6	37391	6	1	3	2	52
SRP_00088	Bacteria_large_SRP links to Rfam database...	0.56	0.47	0.67	42	34128	21	4	17	0	47
SRP_00089	Bacteria_large_SRP links to Rfam database...	0.61	0.50	0.74	45	35717	16	3	13	0	45
SRP_00090	Bacteria_large_SRP links to Rfam database...	0.65	0.58	0.73	52	35440	20	3	16	1	38
SRP_00091	Fungi_SRP links to Rfam database...	0.09	0.02	0.40	2	52970	5	0	3	2	93
SRP_00094	Bacteria_small_SRP links to Rfam database...	0.00	0.00	0.00	0	4089	6	1	5	0	24
SRP_00095	Bacteria_small_SRP links to Rfam database...	0.57	0.44	0.73	11	3990	4	3	1	0	14
SRP_00098	Bacteria_small_SRP links to Rfam database...	0.04	0.03	0.08	1	6429	11	0	11	0	36
SRP_00099	Plant_SRP links to Rfam database...	0.08	0.04	0.14	4	44821	26	1	24	1	91
SRP_00102	Metazoa_SRP links to Rfam database...	0.57	0.42	0.78	42	44497	12	0	12	0	59
SRP_00103	Metazoa_SRP links to Rfam database...	0.56	0.42	0.74	43	45393	15	0	15	0	59
SRP_00104	Fungi_SRP links to Rfam database...	0.09	0.04	0.20	3	34438	14	0	12	2	66
SRP_00105	Bacteria_small_SRP links to Rfam database...	0.34	0.21	0.58	7	5553	5	1	4	0	27
SRP_00106	Bacteria_large_SRP links to Rfam database...	0.61	0.60	0.63	15	5229	10	2	7	1	10
SRP_00107	Bacteria_small_SRP links to Rfam database...	0.43	0.32	0.60	6	3645	4	0	4	0	13
SRP_00117	Metazoa_SRP links to Rfam database...	0.57	0.39	0.83	40	45403	9	0	8	1	62
SRP_00121	Bacteria_small_SRP links to Rfam database...	0.60	0.36	1.00	9	4269	0	0	0	0	16
SRP_00123	Metazoa_SRP links to Rfam database...	0.00	0.00	0.00	0	36569	16	1	15	0	91
SRP_00124	Metazoa_SRP links to Rfam database...	0.00	0.00	0.00	0	37109	20	2	17	1	85
SRP_00127	Fungi_SRP links to Rfam database...	0.07	0.02	0.29	2	72383	7	0	5	2	117
SRP_00128	Bacteria_small_SRP links to Rfam database...	0.00	0.00	0.00	0	6778	8	2	6	0	36
SRP_00130	Archaea_SRP links to Rfam database...	0.43	0.31	0.60	30	49720	22	2	18	2	67
SRP_00132	Bacteria_small_SRP links to Rfam database...	0.32	0.21	0.50	6	4839	6	2	4	0	23
SRP_00134	Bacteria_large_SRP links to Rfam database...	0.65	0.66	0.66	19	5966	11	0	10	1	10
SRP_00136	Fungi_SRP links to Rfam database...	0.10	0.04	0.25	3	44241	11	1	8	2	68
SRP_00137	Bacteria_small_SRP links to Rfam database...	0.00	0.00	0.00	0	4178	8	1	7	0	25
SRP_00141	Bacteria_small_SRP links to Rfam database...	0.26	0.15	0.46	6	6315	7	0	7	0	35
SRP_00142	Archaea_SRP links to Rfam database...	0.55	0.42	0.74	39	46003	17	0	14	3	54
SRP_00143	Archaea_SRP links to Rfam database...	0.56	0.45	0.70	45	49706	20	0	19	1	56
SRP_00144	Archaea_SRP links to Rfam database...	0.55	0.43	0.70	40	46608	20	1	16	3	54
SRP_00145	Bacteria_small_SRP links to Rfam database...	0.00	0.00	0.00	0	6315	13	0	13	0	40
SRP_00146	Bacteria_small_SRP links to Rfam database...	0.00	0.00	0.00	0	5246	7	1	6	0	36
SRP_00148	Fungi_SRP links to Rfam database...	0.09	0.02	0.33	2	50080	6	1	3	2	85
SRP_00152	Plant_SRP links to Rfam database...	0.58	0.39	0.87	40	45707	7	0	6	1	63
SRP_00153	Plant_SRP links to Rfam database...	0.52	0.36	0.74	39	46918	16	0	14	2	68
SRP_00157	Fungi_SRP links to Rfam database...	0.10	0.04	0.25	3	44241	11	2	7	2	69
SRP_00158	Fungi_SRP links to Rfam database...	0.13	0.02	1.00	2	124249	1	0	0	1	113
SRP_00160	Fungi_SRP links to Rfam database...	0.08	0.02	0.25	3	86308	9	3	6	0	127
SRP_00161	Bacteria_small_SRP links to Rfam database...	0.41	0.32	0.54	7	2837	6	0	6	0	15
SRP_00162	Bacteria_small_SRP links to Rfam database...	0.00	0.00	0.00	0	2921	5	4	1	0	23
SRP_00163	Bacteria_small_SRP links to Rfam database...	0.43	0.27	0.70	7	3476	3	0	3	0	19
SRP_00164	Bacteria_small_SRP links to Rfam database...	0.72	0.60	0.88	21	6879	4	1	2	1	14
SRP_00170	Bacteria_small_SRP links to Rfam database...	0.00	0.00	0.00	0	4091	4	0	4	0	25
SRP_00171	Metazoa_SRP links to Rfam database...	0.53	0.40	0.70	35	45401	15	0	15	0	53
SRP_00173	Bacteria_large_SRP links to Rfam database...	0.53	0.44	0.63	40	38163	25	4	19	2	50
SRP_00174	Bacteria_large_SRP links to Rfam database...	0.44	0.31	0.63	27	38738	16	0	16	0	59
SRP_00175	Fungi_SRP links to Rfam database...	0.12	0.04	0.38	3	44543	7	2	3	2	81
SRP_00178	Plant_SRP links to Rfam database...	0.51	0.36	0.71	37	45701	16	0	15	1	65
SRP_00179	Plant_SRP links to Rfam database...	0.50	0.35	0.73	37	46005	15	0	14	1	68
SRP_00181	Plant_SRP links to Rfam database...	0.52	0.35	0.77	36	46009	12	0	11	1	66
SRP_00182	Plant_SRP links to Rfam database...	0.57	0.41	0.79	41	46004	12	1	10	1	60
SRP_00184	Plant_SRP links to Rfam database...	0.51	0.36	0.73	36	46007	14	0	13	1	64
SRP_00188	Plant_SRP links to Rfam database...	0.65	0.52	0.82	41	31075	10	0	9	1	38
SRP_00194	Bacteria_small_SRP links to Rfam database...	0.16	0.10	0.29	2	3233	5	2	3	0	19
SRP_00197	Archaea_SRP links to Rfam database...	0.51	0.37	0.73	37	49404	15	3	11	1	64
SRP_00198	Archaea_SRP links to Rfam database...	0.52	0.39	0.70	40	50983	20	2	15	3	63
SRP_00199	Archaea_SRP links to Rfam database...	0.48	0.37	0.63	39	50978	24	0	23	1	66
SRP_00200	Bacteria_small_SRP links to Rfam database...	0.00	0.00	0.00	0	6888	15	1	14	0	36
SRP_00201	Archaea_SRP links to Rfam database...	0.51	0.39	0.68	43	47832	21	0	20	1	68
SRP_00202	Archaea_SRP links to Rfam database...	0.46	0.36	0.58	42	54213	31	2	28	1	75
SRP_00203	Archaea_SRP links to Rfam database...	0.41	0.31	0.54	33	48767	30	1	27	2	72
SRP_00204	Archaea_SRP links to Rfam database...	0.56	0.42	0.74	43	49083	17	1	14	2	59
SRP_00206	Archaea_SRP links to Rfam database...	0.55	0.41	0.73	44	47835	17	0	16	1	64
SRP_00208	Archaea_SRP links to Rfam database...	0.44	0.32	0.60	32	46612	21	2	19	0	69
SRP_00209	Bacteria_small_SRP links to Rfam database...	0.00	0.00	0.00	0	4649	7	1	6	0	27
SRP_00213	Bacteria_small_SRP links to Rfam database...	0.39	0.28	0.54	7	4173	6	1	5	0	18
SRP_00215	Bacteria_small_SRP links to Rfam database...	0.44	0.28	0.70	7	3230	3	1	2	0	18
SRP_00216	Bacteria_small_SRP links to Rfam database...	0.00	0.00	0.00	0	3396	7	1	6	0	27
SRP_00217	Bacteria_small_SRP links to Rfam database...	0.00	0.00	0.00	0	3312	9	1	8	0	24
SRP_00219	Bacteria_small_SRP links to Rfam database...	0.00	0.00	0.00	0	3315	6	1	5	0	23
SRP_00222	Bacteria_small_SRP links to Rfam database...	0.00	0.00	0.00	0	3074	7	1	6	0	25
SRP_00227	Bacteria_small_SRP links to Rfam database...	0.00	0.00	0.00	0	5143	8	0	8	0	31
SRP_00228	Metazoa_SRP links to Rfam database...	0.56	0.42	0.75	40	45398	14	1	12	1	55
SRP_00229	Bacteria_small_SRP links to Rfam database...	0.00	0.00	0.00	0	5246	7	2	5	0	27
SRP_00230	Fungi_SRP links to Rfam database...	0.08	0.03	0.18	3	39604	16	0	14	2	87
SRP_00231	Bacteria_small_SRP links to Rfam database...	0.46	0.29	0.71	10	5446	4	0	4	0	24
SRP_00233	Bacteria_small_SRP links to Rfam database...	0.00	0.00	0.00	0	5141	10	1	9	0	33
SRP_00234	Bacteria_large_SRP links to Rfam database...	0.59	0.53	0.66	46	36245	27	5	19	3	40
SRP_00239	Plant_SRP links to Rfam database...	0.39	0.31	0.50	29	50345	30	2	27	1	64
SRP_00240	Plant_SRP links to Rfam database...	0.47	0.37	0.60	38	48142	27	2	23	2	64
SRP_00241	Plant_SRP links to Rfam database...	0.00	0.00	0.00	0	46025	31	2	29	0	82
SRP_00243	Bacteria_small_SRP links to Rfam database...	0.00	0.00	0.00	0	5140	11	1	10	0	31
SRP_00244	Bacteria_small_SRP links to Rfam database...	0.00	0.00	0.00	0	6891	12	1	11	0	39
SRP_00247	Metazoa_SRP links to Rfam database...	0.50	0.38	0.67	33	47229	19	2	14	3	54
SRP_00250	Bacteria_small_SRP links to Rfam database...	0.00	0.00	0.00	0	6775	11	2	9	0	36
SRP_00251	Bacteria_small_SRP links to Rfam database...	0.00	0.00	0.00	0	7011	10	1	9	0	36
SRP_00252	Metazoa_SRP links to Rfam database...	0.00	0.00	0.00	0	49113	28	3	25	0	89
SRP_00253	Metazoa_SRP links to Rfam database...	0.00	0.00	0.00	0	49433	22	4	18	0	90
SRP_00254	Fungi_SRP links to Rfam database...	0.00	0.00	0.00	0	32382	3	3	0	0	61
SRP_00255	Archaea_SRP links to Rfam database...	0.52	0.38	0.71	36	47535	17	2	13	2	58
SRP_00257	Metazoa_SRP links to Rfam database...	0.00	0.00	0.00	0	51009	31	2	29	0	108
SRP_00260	Metazoa_SRP links to Rfam database...	0.00	0.00	0.00	0	47877	18	1	17	0	100
SRP_00265	Fungi_SRP links to Rfam database...	0.00	0.00	0.00	0	41319	9	1	8	0	73
SRP_00266	Bacteria_small_SRP links to Rfam database...	0.00	0.00	0.00	0	4647	9	1	8	0	29
SRP_00267	Metazoa_SRP links to Rfam database...	0.17	0.11	0.26	11	44509	32	0	31	1	85
SRP_00268	Bacteria_small_SRP links to Rfam database...	0.00	0.00	0.00	0	4180	6	1	5	0	27
SRP_00269	Bacteria_small_SRP links to Rfam database...	0.29	0.18	0.46	6	5037	7	0	7	0	27
SRP_00270	Bacteria_small_SRP links to Rfam database...	0.28	0.16	0.50	5	4646	5	0	5	0	26
SRP_00271	Bacteria_small_SRP links to Rfam database...	0.00	0.00	0.00	0	3235	5	0	5	0	24
SRP_00273	Bacteria_small_SRP links to Rfam database...	0.00	0.00	0.00	0	6778	8	1	7	0	40
SRP_00274	Bacteria_small_SRP links to Rfam database...	0.00	0.00	0.00	0	6892	11	1	10	0	38
SRP_00276	Archaea_SRP links to Rfam database...	0.62	0.48	0.79	53	50654	15	1	13	1	57
SRP_00278	Archaea_SRP links to Rfam database...	0.48	0.35	0.65	37	45999	21	1	19	1	68
SRP_00282	Metazoa_SRP links to Rfam database...	0.00	0.00	0.00	0	43345	20	3	17	0	63
SRP_00285	Bacteria_small_SRP links to Rfam database...	0.33	0.20	0.55	6	3730	5	0	5	0	24
SRP_00286	Fungi_SRP links to Rfam database...	0.07	0.02	0.21	4	137007	18	0	15	3	170
SRP_00287	Fungi_SRP links to Rfam database...	0.07	0.02	0.25	3	141766	11	1	8	2	159
SRP_00290	Fungi_SRP links to Rfam database...	0.00	0.00	0.00	0	100557	19	1	18	0	135
SRP_00292	Fungi_SRP links to Rfam database...	0.05	0.02	0.14	3	137529	20	1	17	2	170
SRP_00294	Fungi_SRP links to Rfam database...	0.05	0.02	0.13	3	129263	24	1	19	4	164
SRP_00295	Bacteria_small_SRP links to Rfam database...	0.00	0.00	0.00	0	6894	9	1	8	0	38
SRP_00299	Metazoa_SRP links to Rfam database...	0.48	0.34	0.67	34	44202	17	0	17	0	65
SRP_00300	Metazoa_SRP links to Rfam database...	0.46	0.35	0.61	33	44199	21	0	21	0	61
SRP_00301	Fungi_SRP links to Rfam database...	0.10	0.02	0.40	2	32635	5	0	3	2	84
SRP_00302	Fungi_SRP links to Rfam database...	0.10	0.04	0.25	3	41604	11	3	6	2	78
SRP_00303	Bacteria_small_SRP links to Rfam database...	0.00	0.00	0.00	0	6665	5	1	4	0	32
SRP_00308	Bacteria_large_SRP links to Rfam database...	0.62	0.55	0.72	48	36248	19	4	15	0	40
SRP_00310	Bacteria_small_SRP links to Rfam database...	0.60	0.43	0.83	10	2914	3	0	2	1	13
SRP_00312	Bacteria_small_SRP links to Rfam database...	0.00	0.00	0.00	0	4178	8	0	8	0	27
SRP_00315	Bacteria_small_SRP links to Rfam database...	0.63	0.43	0.91	10	2915	1	0	1	0	13
SRP_00317	Metazoa_SRP links to Rfam database...	0.47	0.36	0.63	35	45094	21	0	21	0	63
SRP_00318	Bacteria_small_SRP links to Rfam database...	0.69	0.48	1.00	11	2992	0	0	0	0	12
SRP_00321	Archaea_SRP links to Rfam database...	0.37	0.25	0.56	27	47538	22	1	20	1	81
SRP_00322	Archaea_SRP links to Rfam database...	0.47	0.34	0.66	37	48460	20	2	17	1	72
SRP_00323	Archaea_SRP links to Rfam database...	0.53	0.36	0.76	39	47227	13	0	12	1	68
SRP_00324	Bacteria_small_SRP links to Rfam database...	0.00	0.00	0.00	0	5344	12	2	10	0	29
SRP_00325	Bacteria_small_SRP links to Rfam database...	0.36	0.21	0.64	7	4360	4	0	4	0	26
SRP_00326	Bacteria_small_SRP links to Rfam database...	0.30	0.16	0.56	5	5041	4	0	4	0	26
SRP_00328	Metazoa_SRP links to Rfam database...	0.00	0.00	0.00	0	39594	27	2	25	0	85
SRP_00329	Metazoa_SRP links to Rfam database...	0.00	0.00	0.00	0	39885	18	1	17	0	85
SRP_00330	Archaea_SRP links to Rfam database...	0.38	0.25	0.57	24	50044	20	1	17	2	71
SRP_00331	Metazoa_SRP links to Rfam database...	0.00	0.00	0.00	0	37656	19	2	17	0	87
SRP_00332	Archaea_SRP links to Rfam database...	0.70	0.58	0.86	61	50332	11	0	10	1	45
SRP_00333	Bacteria_small_SRP links to Rfam database...	0.33	0.21	0.54	7	5138	6	0	6	0	27
SRP_00335	Bacteria_large_SRP links to Rfam database...	0.42	0.41	0.43	16	35208	34	11	10	13	23
SRP_00337	Bacteria_large_SRP links to Rfam database...	0.58	0.49	0.68	45	35445	21	4	17	0	46
SRP_00338	Bacteria_small_SRP links to Rfam database...	0.51	0.33	0.80	12	5445	4	0	3	1	24
SRP_00339	Archaea_SRP links to Rfam database...	0.36	0.26	0.50	24	44503	25	1	23	1	70
SRP_00340	Metazoa_SRP links to Rfam database...	0.21	0.13	0.34	11	41296	23	1	20	2	71
SRP_00341	Bacteria_small_SRP links to Rfam database...	0.35	0.23	0.54	7	4740	6	1	5	0	24
SRP_00342	Bacteria_small_SRP links to Rfam database...	0.38	0.24	0.60	6	3995	4	0	4	0	19
SRP_00347	Metazoa_SRP links to Rfam database...	0.40	0.28	0.57	27	46618	21	1	19	1	69
SRP_00350	Bacteria_small_SRP links to Rfam database...	0.19	0.07	0.50	2	3912	2	0	2	0	25
SRP_00356	Bacteria_small_SRP links to Rfam database...	0.00	0.00	0.00	0	5043	7	1	6	0	30
SRP_00357	Bacteria_small_SRP links to Rfam database...	0.46	0.31	0.69	11	5340	5	0	5	0	25
SRP_00358	Bacteria_small_SRP links to Rfam database...	0.49	0.29	0.83	10	6316	2	1	1	0	25
SRP_00361	Plant_SRP links to Rfam database...	0.09	0.04	0.19	4	41884	18	1	16	1	86
SRP_00363	Bacteria_small_SRP links to Rfam database...	0.52	0.37	0.73	11	4738	4	0	4	0	19
SRP_00365	Bacteria_small_SRP links to Rfam database...	0.45	0.26	0.78	7	3394	2	0	2	0	20
SRP_00367	Bacteria_small_SRP links to Rfam database...	0.00	0.00	0.00	0	6774	12	0	12	0	35
SRP_00368	Metazoa_SRP links to Rfam database...	0.57	0.45	0.73	44	43896	16	0	16	0	54
SRP_00369	Bacteria_small_SRP links to Rfam database...	0.30	0.17	0.55	6	5767	5	0	5	0	29
SRP_00371	Fungi_SRP links to Rfam database...	0.00	0.00	0.00	0	36310	5	0	5	0	82
SRP_00382	Fungi_SRP links to Rfam database...	0.06	0.02	0.18	3	141761	16	0	14	2	167
SRP_00383	Bacteria_small_SRP links to Rfam database...	0.54	0.42	0.71	10	3226	4	0	4	0	14
TMR_00173	tmRNA links to Rfam database...	0.30	0.17	0.54	7	42182	6	2	4	0	35
TMR_00357	tmRNA links to Rfam database...	0.25	0.09	0.73	8	83017	3	0	3	0	84
TMR_00601	tmRNA links to Rfam database...	0.30	0.19	0.47	8	58979	9	2	7	0	34
TMR_00696	tmRNA links to Rfam database...	0.24	0.07	0.80	8	85068	2	0	2	0	106

^top

Matthews Correlation Coeffient, Sensitivity and Positive Predictive Value have been calculated based on the paper by Gardener & Giegerich, 2004.

Table of contents:

Overview

Performance plots

Performance of Fold - scored higher in this pairwise comparison

1. Total counts & total scores for Fold

2. Individual counts for Fold [ download as .csv ]

Performance of RSpredict(seed) - scored lower in this pairwise comparison

1. Total counts & total scores for RSpredict(seed)

2. Individual counts for RSpredict(seed) [ download as .csv ]