CompaRNA - on-line benchmarks of RNA structure prediction methods

Laboratory of Structural Bioinformatics @ Adam Mickiewicz University in Poznan

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Overview

Metric	UNAFold		Afold
MCC	0.446	>	0.434
Average MCC ± 95% Confidence Intervals	0.552 ± 0.015	>	0.524 ± 0.015
Sensitivity	0.444	>	0.433
Positive Predictive Value	0.450	>	0.434
Total TP	68705	>	67132
Total TN	359950472	>	359948641
Total FP	105107	<	109497
Total FP CONTRA	14251	<	14419
Total FP INCONS	69778	<	73014
Total FP COMP	21078	<	22064
Total FN	86210	<	87783
P-value	3.56938820447e-08

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Performance plots

Comparison of performance of UNAFold and Afold. Positive Predictive Value (PPV) is plotted against sensitivity. Each dot represents a single test of each method. See tables below for raw data (individual counts for UNAFold and Afold).
Average Matthews Correlation Coefficients (MCC) with 95% confidence intervals (CIs) were plotted for different RNA families, for which at least 3 members were present in the benchmarking dataset. 'n' denotes the number of MCCs used to calculate the average and CI. See tables below for raw data (individual counts for UNAFold and Afold).
Comparison of average Matthews Correlation Coefficients (MCCs) for UNAFold and Afold. The whiskers correspond to 95% confidence intervals (CIs). 'n' denotes the number of MCCs used to calculate average MCCs and CIs. See tables below for raw data (individual counts for UNAFold and Afold).

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Performance of UNAFold - scored higher in this pairwise comparison

1. Total counts & total scores for UNAFold

Total Base Pair Counts
Total TP	68705
Total TN	359950472
Total FP	105107
Total FP CONTRA	14251
Total FP INCONS	69778
Total FP COMP	21078
Total FN	86210

Total Scores
MCC	0.446
Average MCC ± 95% Confidence Intervals	0.552 ± 0.015
Sensitivity	0.444
Positive Predictive Value	0.450
Nr of predictions	1275

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2. Individual counts for UNAFold [ download as .csv ]

RNA Chain	Rfam family	MCC	SENS	PPV	TP	TN	FP	FP CONTRA	FP INCONS	FP COMP	FN
ASE_00001	RNaseP_arch links to Rfam database...	0.63	0.61	0.66	46	34121	30	2	22	6	29
ASE_00002	RNaseP_arch links to Rfam database...	0.66	0.62	0.70	45	35447	24	3	16	5	28
ASE_00004	RNaseP_bact_a links to Rfam database...	0.71	0.70	0.72	68	47800	29	9	18	2	29
ASE_00005	RNaseP_bact_a links to Rfam database...	0.60	0.54	0.67	63	57876	35	1	30	4	54
ASE_00006	RNaseP_bact_a links to Rfam database...	0.67	0.66	0.68	61	47496	32	7	22	3	32
ASE_00007	RNaseP_bact_a links to Rfam database...	0.57	0.54	0.60	59	59587	43	1	38	4	51
ASE_00009	RNaseP_arch links to Rfam database...	0.78	0.75	0.81	50	26044	15	0	12	3	17
ASE_00012	RNaseP_bact_a links to Rfam database...	0.52	0.48	0.56	59	73814	52	4	43	5	64
ASE_00014	RNaseP_arch links to Rfam database...	0.24	0.25	0.24	26	54178	82	8	73	1	80
ASE_00016	-	0.60	0.62	0.58	38	66001	85	3	24	58	23
ASE_00017	RNaseP_nuc links to Rfam database...	0.26	0.28	0.24	18	50966	75	6	50	19	46
ASE_00020	RNaseP_bact_a links to Rfam database...	0.57	0.54	0.60	68	73806	46	7	39	0	58
ASE_00021	RNaseP_bact_a links to Rfam database...	0.58	0.54	0.62	86	104057	60	7	46	7	74
ASE_00023	RNaseP_bact_a links to Rfam database...	0.64	0.64	0.64	81	84129	48	5	40	3	46
ASE_00024	-	0.80	0.76	0.84	53	29340	18	3	7	8	17
ASE_00028	RNaseP_bact_b links to Rfam database...	0.56	0.55	0.57	69	84545	60	8	44	8	57
ASE_00029	RNaseP_bact_a links to Rfam database...	0.37	0.36	0.38	44	82913	73	12	59	2	78
ASE_00030	RNaseP_bact_a links to Rfam database...	0.60	0.58	0.63	84	85357	50	5	45	0	61
ASE_00032	RNaseP_bact_a links to Rfam database...	0.56	0.53	0.58	63	80092	50	3	42	5	55
ASE_00033	RNaseP_bact_a links to Rfam database...	0.58	0.52	0.65	63	64883	37	2	32	3	58
ASE_00036	RNaseP_bact_a links to Rfam database...	0.43	0.41	0.45	54	75734	70	8	59	3	78
ASE_00037	RNaseP_bact_a links to Rfam database...	0.63	0.59	0.66	65	59242	37	0	33	4	45
ASE_00038	RNaseP_bact_a links to Rfam database...	0.54	0.53	0.54	54	53528	47	4	42	1	47
ASE_00040	RNaseP_bact_a links to Rfam database...	0.48	0.46	0.50	61	78882	66	5	55	6	72
ASE_00041	RNaseP_bact_a links to Rfam database...	0.44	0.41	0.47	44	57537	53	2	47	4	64
ASE_00042	RNaseP_bact_a links to Rfam database...	0.61	0.57	0.64	83	89971	49	2	44	3	62
ASE_00044	RNaseP_bact_a links to Rfam database...	0.69	0.68	0.70	71	54514	34	3	27	4	34
ASE_00045	RNaseP_bact_b links to Rfam database...	0.67	0.66	0.67	53	47199	34	7	19	8	27
ASE_00046	RNaseP_bact_a links to Rfam database...	0.57	0.51	0.64	53	50320	30	5	25	0	50
ASE_00047	RNaseP_bact_a links to Rfam database...	0.33	0.32	0.35	41	74189	76	4	71	1	89
ASE_00053	RNaseP_bact_a links to Rfam database...	0.56	0.54	0.57	72	79275	57	5	49	3	61
ASE_00056	-	0.38	0.36	0.41	26	30812	48	4	34	10	46
ASE_00064	RNaseP_bact_a links to Rfam database...	0.32	0.31	0.32	28	45363	69	4	56	9	61
ASE_00066	RNaseP_bact_a links to Rfam database...	0.68	0.64	0.73	83	72277	31	4	26	1	47
ASE_00068	RNaseP_bact_a links to Rfam database...	0.52	0.49	0.55	42	37598	35	4	31	0	43
ASE_00074	RNaseP_bact_a links to Rfam database...	0.58	0.57	0.60	68	67782	46	5	41	0	51
ASE_00075	RNaseP_bact_a links to Rfam database...	0.61	0.56	0.68	90	108678	47	3	40	4	72
ASE_00076	RNaseP_bact_a links to Rfam database...	0.55	0.52	0.59	61	68161	46	4	39	3	57
ASE_00077	RNaseP_bact_a links to Rfam database...	0.52	0.51	0.54	44	45068	38	7	31	0	42
ASE_00078	RNaseP_bact_a links to Rfam database...	0.65	0.63	0.68	52	42994	31	0	25	6	31
ASE_00079	RNaseP_bact_a links to Rfam database...	0.54	0.52	0.57	52	55519	40	4	36	0	48
ASE_00080	RNaseP_bact_a links to Rfam database...	0.47	0.45	0.49	55	71519	60	5	52	3	68
ASE_00081	RNaseP_bact_a links to Rfam database...	0.56	0.54	0.58	52	49680	39	2	36	1	45
ASE_00082	RNaseP_bact_a links to Rfam database...	0.55	0.51	0.59	59	70400	55	1	40	14	57
ASE_00083	RNaseP_bact_a links to Rfam database...	0.79	0.75	0.83	82	62382	24	2	15	7	28
ASE_00084	RNaseP_bact_a links to Rfam database...	0.69	0.69	0.70	68	53531	32	6	23	3	31
ASE_00087	RNaseP_bact_a links to Rfam database...	0.59	0.54	0.64	78	88288	49	5	39	5	66
ASE_00089	-	0.65	0.58	0.72	46	31311	21	0	18	3	33
ASE_00090	RNaseP_bact_a links to Rfam database...	0.59	0.59	0.59	60	55509	47	2	40	5	41
ASE_00092	RNaseP_bact_a links to Rfam database...	0.69	0.65	0.73	74	63444	33	5	23	5	39
ASE_00096	RNaseP_bact_a links to Rfam database...	0.56	0.54	0.59	62	63441	43	4	39	0	53
ASE_00104	RNaseP_bact_a links to Rfam database...	0.70	0.67	0.73	80	64151	31	5	25	1	39
ASE_00111	RNaseP_nuc links to Rfam database...	0.25	0.32	0.20	18	49997	80	31	40	9	39
ASE_00112	RNaseP_bact_a links to Rfam database...	0.78	0.74	0.83	86	75362	24	5	13	6	30
ASE_00114	RNaseP_bact_b links to Rfam database...	0.49	0.49	0.49	38	45374	45	6	33	6	39
ASE_00115	RNaseP_bact_a links to Rfam database...	0.49	0.48	0.51	48	54521	53	1	45	7	53
ASE_00116	RNaseP_arch links to Rfam database...	0.20	0.20	0.20	13	31561	55	2	50	3	53
ASE_00118	RNaseP_bact_a links to Rfam database...	0.58	0.56	0.59	57	60630	42	3	36	3	45
ASE_00119	RNaseP_bact_a links to Rfam database...	0.67	0.65	0.69	70	62734	33	1	30	2	38
ASE_00120	RNaseP_arch links to Rfam database...	0.51	0.49	0.53	46	46885	42	8	32	2	48
ASE_00121	RNaseP_arch links to Rfam database...	0.24	0.24	0.24	22	45060	68	5	63	0	70
ASE_00122	RNaseP_bact_a links to Rfam database...	0.47	0.45	0.48	40	43282	43	2	41	0	48
ASE_00123	RNaseP_bact_a links to Rfam database...	0.28	0.27	0.29	23	38425	59	3	52	4	62
ASE_00125	RNaseP_bact_a links to Rfam database...	0.64	0.63	0.65	55	39255	30	4	26	0	33
ASE_00126	RNaseP_bact_a links to Rfam database...	0.75	0.77	0.74	63	40385	26	3	19	4	19
ASE_00128	RNaseP_bact_a links to Rfam database...	0.65	0.62	0.69	62	53211	36	3	25	8	38
ASE_00129	RNaseP_bact_a links to Rfam database...	0.52	0.50	0.53	56	62730	53	5	44	4	55
ASE_00131	RNaseP_bact_a links to Rfam database...	0.61	0.55	0.68	47	39271	32	0	22	10	38
ASE_00132	RNaseP_bact_a links to Rfam database...	0.66	0.63	0.68	60	50315	30	4	24	2	35
ASE_00134	RNaseP_bact_a links to Rfam database...	0.41	0.42	0.40	40	50302	64	10	51	3	55
ASE_00135	RNaseP_bact_a links to Rfam database...	0.46	0.45	0.47	49	63085	59	8	48	3	60
ASE_00136	RNaseP_bact_a links to Rfam database...	0.56	0.52	0.60	48	48125	41	1	31	9	44
ASE_00137	RNaseP_bact_a links to Rfam database...	0.67	0.65	0.68	64	48422	32	4	26	2	34
ASE_00138	RNaseP_bact_a links to Rfam database...	0.53	0.52	0.55	42	40393	35	4	31	0	39
ASE_00139	RNaseP_bact_a links to Rfam database...	0.35	0.33	0.38	34	54196	58	4	51	3	70
ASE_00140	RNaseP_bact_a links to Rfam database...	0.72	0.67	0.77	84	70767	27	4	21	2	41
ASE_00144	-	0.37	0.38	0.36	37	58208	66	12	54	0	60
ASE_00145	RNaseP_arch links to Rfam database...	0.46	0.45	0.48	50	70021	59	7	47	5	61
ASE_00146	RNaseP_bact_a links to Rfam database...	0.55	0.52	0.60	64	70769	49	2	41	6	60
ASE_00148	RNaseP_arch links to Rfam database...	0.69	0.67	0.72	103	112431	44	4	37	3	51
ASE_00151	RNaseP_bact_a links to Rfam database...	0.29	0.28	0.31	27	51915	61	7	54	0	71
ASE_00153	RNaseP_nuc links to Rfam database...	0.67	0.68	0.66	50	57554	68	2	24	42	23
ASE_00154	RNaseP_arch links to Rfam database...	0.64	0.63	0.65	67	65238	39	4	32	3	40
ASE_00155	RNaseP_arch links to Rfam database...	0.62	0.61	0.63	86	93392	57	8	42	7	56
ASE_00159	-	0.64	0.59	0.69	36	34928	45	0	16	29	25
ASE_00160	-	0.82	0.80	0.83	40	23823	25	0	8	17	10
ASE_00161	RNaseP_bact_b links to Rfam database...	0.34	0.36	0.33	31	53533	68	10	54	4	56
ASE_00163	RNaseP_bact_a links to Rfam database...	0.60	0.59	0.62	55	53212	45	2	32	11	38
ASE_00165	RNaseP_bact_a links to Rfam database...	0.54	0.52	0.56	53	52881	42	5	36	1	48
ASE_00168	RNaseP_nuc links to Rfam database...	0.31	0.38	0.25	24	60631	84	28	43	13	40
ASE_00169	RNaseP_bact_a links to Rfam database...	0.51	0.49	0.54	52	57194	49	7	38	4	55
ASE_00170	RNaseP_bact_a links to Rfam database...	0.70	0.68	0.72	63	48740	26	2	23	1	30
ASE_00171	RNaseP_bact_a links to Rfam database...	0.70	0.69	0.71	65	48425	26	5	21	0	29
ASE_00172	RNaseP_bact_a links to Rfam database...	0.69	0.68	0.70	72	58893	36	6	25	5	34
ASE_00174	RNaseP_bact_a links to Rfam database...	0.52	0.51	0.53	56	60970	50	6	43	1	53
ASE_00175	RNaseP_bact_a links to Rfam database...	0.73	0.70	0.76	75	59932	31	2	22	7	32
ASE_00176	RNaseP_bact_a links to Rfam database...	0.61	0.58	0.64	64	59931	39	6	30	3	46
ASE_00179	RNaseP_bact_a links to Rfam database...	0.65	0.65	0.64	55	44167	31	6	25	0	29
ASE_00180	RNaseP_bact_a links to Rfam database...	0.65	0.62	0.69	62	51270	33	2	26	5	38
ASE_00181	RNaseP_bact_a links to Rfam database...	0.54	0.53	0.55	56	57528	50	3	43	4	50
ASE_00182	RNaseP_bact_a links to Rfam database...	0.53	0.51	0.55	69	84130	59	6	50	3	67
ASE_00183	RNaseP_bact_a links to Rfam database...	0.72	0.71	0.73	80	61316	33	2	27	4	33
ASE_00185	RNaseP_bact_a links to Rfam database...	0.74	0.71	0.77	91	73418	33	5	22	6	37
ASE_00186	RNaseP_bact_a links to Rfam database...	0.74	0.70	0.79	92	78886	30	3	22	5	40
ASE_00187	RNaseP_arch links to Rfam database...	0.47	0.44	0.49	51	68531	58	6	47	5	64
ASE_00190	RNaseP_bact_b links to Rfam database...	0.57	0.54	0.60	49	45369	35	6	27	2	41
ASE_00191	RNaseP_arch links to Rfam database...	0.69	0.67	0.72	41	29589	22	1	15	6	20
ASE_00192	RNaseP_bact_b links to Rfam database...	0.41	0.40	0.42	53	84541	78	9	63	6	80
ASE_00196	RNaseP_arch links to Rfam database...	0.73	0.72	0.75	54	31554	21	2	16	3	21
ASE_00197	RNaseP_bact_a links to Rfam database...	0.54	0.50	0.58	73	89127	58	2	51	5	72
ASE_00198	RNaseP_bact_a links to Rfam database...	0.53	0.53	0.53	54	52549	47	7	40	0	48
ASE_00203	RNaseP_bact_a links to Rfam database...	0.62	0.61	0.63	59	46572	34	6	28	0	37
ASE_00209	RNaseP_arch links to Rfam database...	0.39	0.38	0.42	33	42992	46	5	41	0	55
ASE_00210	RNaseP_arch links to Rfam database...	0.59	0.60	0.59	39	27195	28	6	21	1	26
ASE_00212	RNaseP_bact_a links to Rfam database...	0.51	0.49	0.54	72	93827	66	5	57	4	76
ASE_00213	RNaseP_arch links to Rfam database...	0.74	0.73	0.76	48	27198	16	3	12	1	18
ASE_00214	RNaseP_bact_a links to Rfam database...	0.79	0.77	0.81	79	56182	27	3	16	8	24
ASE_00215	RNaseP_bact_a links to Rfam database...	0.58	0.55	0.62	54	48429	35	7	26	2	45
ASE_00216	RNaseP_bact_a links to Rfam database...	0.66	0.66	0.67	54	39259	28	9	18	1	28
ASE_00217	RNaseP_bact_a links to Rfam database...	0.30	0.29	0.33	26	40390	58	6	48	4	64
ASE_00221	RNaseP_bact_a links to Rfam database...	0.57	0.52	0.64	61	64524	38	3	32	3	56
ASE_00222	RNaseP_arch links to Rfam database...	0.59	0.59	0.61	92	111949	61	10	50	1	65
ASE_00227	RNaseP_bact_a links to Rfam database...	0.30	0.29	0.32	38	78885	80	5	75	0	95
ASE_00228	RNaseP_bact_a links to Rfam database...	0.53	0.55	0.52	47	46880	44	14	30	0	39
ASE_00229	RNaseP_bact_a links to Rfam database...	0.60	0.60	0.61	52	42401	33	10	23	0	35
ASE_00231	RNaseP_bact_a links to Rfam database...	0.31	0.31	0.31	30	47798	67	8	59	0	66
ASE_00232	RNaseP_bact_a links to Rfam database...	0.59	0.58	0.60	49	38422	34	3	29	2	35
ASE_00234	RNaseP_bact_a links to Rfam database...	0.51	0.47	0.54	61	75354	55	4	47	4	68
ASE_00237	RNaseP_nuc links to Rfam database...	0.00	0.00	0.00	0	45667	96	29	57	10	56
ASE_00238	RNaseP_bact_a links to Rfam database...	0.52	0.50	0.53	57	64154	55	1	49	5	57
ASE_00240	RNaseP_bact_a links to Rfam database...	0.61	0.59	0.63	55	46578	40	2	30	8	38
ASE_00241	RNaseP_bact_a links to Rfam database...	0.55	0.53	0.58	46	43876	41	5	29	7	41
ASE_00245	RNaseP_nuc links to Rfam database...	0.90	0.87	0.93	68	55205	35	0	5	30	10
ASE_00246	RNaseP_nuc links to Rfam database...	0.16	0.18	0.15	12	48123	79	19	51	9	55
ASE_00247	RNaseP_nuc links to Rfam database...	0.17	0.19	0.15	12	54207	97	18	48	31	52
ASE_00252	RNaseP_bact_a links to Rfam database...	0.56	0.54	0.58	91	115284	69	5	60	4	77
ASE_00254	RNaseP_bact_a links to Rfam database...	0.74	0.72	0.76	59	36778	24	6	13	5	23
ASE_00255	RNaseP_bact_a links to Rfam database...	0.48	0.45	0.50	59	74573	59	7	52	0	71
ASE_00257	RNaseP_bact_a links to Rfam database...	0.56	0.56	0.57	54	50946	40	9	31	0	43
ASE_00258	RNaseP_nuc links to Rfam database...	0.73	0.67	0.80	36	26751	21	0	9	12	18
ASE_00263	RNaseP_bact_a links to Rfam database...	0.62	0.62	0.62	74	70380	47	5	41	1	46
ASE_00264	RNaseP_nuc links to Rfam database...	0.89	0.83	0.97	83	49055	16	0	3	13	17
ASE_00267	RNaseP_bact_a links to Rfam database...	0.49	0.45	0.53	40	45074	45	4	32	9	48
ASE_00270	RNaseP_bact_a links to Rfam database...	0.68	0.66	0.69	85	72267	40	7	31	2	43
ASE_00274	RNaseP_bact_a links to Rfam database...	0.50	0.49	0.51	50	55513	48	9	39	0	53
ASE_00277	RNaseP_bact_a links to Rfam database...	0.39	0.38	0.39	35	48115	57	9	46	2	56
ASE_00279	RNaseP_bact_a links to Rfam database...	0.70	0.66	0.74	67	53210	28	0	24	4	34
ASE_00280	RNaseP_bact_a links to Rfam database...	0.62	0.60	0.64	59	51911	38	4	29	5	39
ASE_00282	RNaseP_bact_a links to Rfam database...	0.55	0.54	0.56	69	77692	54	6	48	0	58
ASE_00283	RNaseP_bact_a links to Rfam database...	0.82	0.79	0.86	84	61678	22	2	12	8	23
ASE_00284	RNaseP_bact_a links to Rfam database...	0.63	0.61	0.65	66	58209	41	5	31	5	42
ASE_00285	RNaseP_bact_a links to Rfam database...	0.69	0.65	0.73	79	68898	36	2	27	7	43
ASE_00286	RNaseP_bact_a links to Rfam database...	0.43	0.42	0.43	39	46574	61	3	49	9	53
ASE_00287	RNaseP_bact_a links to Rfam database...	0.70	0.66	0.75	68	54855	30	2	21	7	35
ASE_00288	RNaseP_bact_a links to Rfam database...	0.45	0.43	0.47	40	45970	47	3	43	1	53
ASE_00289	RNaseP_bact_a links to Rfam database...	0.66	0.62	0.70	97	100887	44	3	38	3	60
ASE_00291	-	0.37	0.36	0.39	34	48429	54	9	44	1	60
ASE_00292	RNaseP_bact_a links to Rfam database...	0.64	0.59	0.70	82	81693	38	3	32	3	56
ASE_00294	RNaseP_bact_a links to Rfam database...	0.78	0.74	0.83	127	114328	29	3	23	3	44
ASE_00295	RNaseP_bact_a links to Rfam database...	0.63	0.59	0.67	77	73805	41	6	32	3	54
ASE_00296	RNaseP_bact_a links to Rfam database...	0.29	0.28	0.31	40	91676	90	9	81	0	105
ASE_00297	RNaseP_bact_a links to Rfam database...	0.68	0.67	0.69	66	52879	30	4	26	0	32
ASE_00298	RNaseP_bact_a links to Rfam database...	0.46	0.44	0.48	50	67423	59	6	49	4	63
ASE_00299	RNaseP_bact_a links to Rfam database...	0.50	0.48	0.52	48	49362	52	5	40	7	52
ASE_00303	RNaseP_nuc links to Rfam database...	0.62	0.64	0.60	61	67795	47	10	30	7	34
ASE_00305	RNaseP_bact_b links to Rfam database...	0.67	0.68	0.65	58	54526	37	14	17	6	27
ASE_00313	RNaseP_nuc links to Rfam database...	0.72	0.71	0.72	63	62394	46	6	18	22	26
ASE_00321	RNaseP_bact_b links to Rfam database...	0.56	0.56	0.56	49	54528	41	7	31	3	39
ASE_00322	-	0.74	0.77	0.71	37	29351	38	3	12	23	11
ASE_00328	RNaseP_bact_b links to Rfam database...	0.40	0.40	0.41	45	72660	73	3	63	7	67
ASE_00330	RNaseP_nuc links to Rfam database...	0.70	0.70	0.71	63	56191	46	4	22	20	27
ASE_00332	RNaseP_bact_a links to Rfam database...	0.54	0.51	0.56	71	81683	57	2	54	1	67
ASE_00337	RNaseP_nuc links to Rfam database...	0.58	0.58	0.59	41	39270	43	5	24	14	30
ASE_00338	RNaseP_nuc links to Rfam database...	0.60	0.54	0.66	53	66350	49	5	22	22	45
ASE_00340	RNaseP_bact_a links to Rfam database...	0.75	0.74	0.76	63	45973	29	6	14	9	22
ASE_00342	RNaseP_bact_a links to Rfam database...	0.56	0.51	0.60	59	62383	39	2	37	0	56
ASE_00343	RNaseP_bact_a links to Rfam database...	0.63	0.63	0.63	71	83323	55	8	34	13	42
ASE_00344	-	0.82	0.80	0.83	45	27207	27	4	5	18	11
ASE_00346	RNaseP_arch links to Rfam database...	0.30	0.29	0.31	28	48115	64	7	55	2	69
ASE_00350	-	0.85	0.79	0.91	41	29601	30	0	4	26	11
ASE_00359	RNaseP_arch links to Rfam database...	0.49	0.49	0.49	39	42698	46	3	38	5	41
ASE_00361	RNaseP_bact_a links to Rfam database...	0.49	0.46	0.51	59	75351	59	7	49	3	68
ASE_00362	RNaseP_bact_a links to Rfam database...	0.62	0.62	0.63	56	48116	36	6	27	3	35
ASE_00363	RNaseP_bact_a links to Rfam database...	0.55	0.55	0.54	52	51264	47	4	40	3	42
ASE_00364	RNaseP_bact_a links to Rfam database...	0.31	0.30	0.32	32	54184	72	7	62	3	73
ASE_00366	RNaseP_bact_a links to Rfam database...	0.56	0.58	0.54	57	58547	50	10	39	1	41
ASE_00367	RNaseP_bact_a links to Rfam database...	0.55	0.56	0.55	48	42983	43	6	34	3	38
ASE_00369	RNaseP_bact_a links to Rfam database...	0.65	0.63	0.67	67	55845	37	3	30	4	40
ASE_00370	RNaseP_bact_a links to Rfam database...	0.67	0.65	0.69	55	41825	25	7	18	0	29
ASE_00372	RNaseP_bact_a links to Rfam database...	0.70	0.69	0.71	69	51906	31	5	23	3	31
ASE_00374	RNaseP_bact_a links to Rfam database...	0.56	0.56	0.57	49	44764	37	8	29	0	39
ASE_00375	RNaseP_bact_a links to Rfam database...	0.72	0.68	0.77	75	60280	28	1	22	5	35
ASE_00376	RNaseP_bact_a links to Rfam database...	0.52	0.50	0.55	53	56856	47	4	40	3	52
ASE_00379	RNaseP_bact_a links to Rfam database...	0.70	0.69	0.71	61	45970	34	3	22	9	28
ASE_00380	RNaseP_bact_a links to Rfam database...	0.47	0.44	0.49	44	54857	50	1	44	5	55
ASE_00382	RNaseP_bact_a links to Rfam database...	0.53	0.52	0.54	44	41824	40	6	31	3	40
ASE_00383	RNaseP_bact_a links to Rfam database...	0.53	0.50	0.55	53	54519	47	4	39	4	52
ASE_00384	RNaseP_bact_a links to Rfam database...	0.60	0.59	0.61	54	48428	39	2	32	5	38
ASE_00385	RNaseP_bact_a links to Rfam database...	0.55	0.52	0.58	42	41832	35	4	27	4	39
ASE_00386	RNaseP_bact_a links to Rfam database...	0.62	0.61	0.63	59	50309	42	2	33	7	37
ASE_00387	RNaseP_bact_a links to Rfam database...	0.44	0.44	0.44	46	55841	58	6	52	0	58
ASE_00388	RNaseP_bact_a links to Rfam database...	0.73	0.73	0.74	65	45665	28	3	20	5	24
ASE_00390	RNaseP_bact_a links to Rfam database...	0.49	0.47	0.51	40	42117	45	6	32	7	45
ASE_00393	RNaseP_bact_a links to Rfam database...	0.36	0.34	0.38	32	47810	59	3	50	6	61
ASE_00394	RNaseP_bact_a links to Rfam database...	0.75	0.75	0.75	70	46878	26	5	18	3	23
ASE_00395	RNaseP_bact_a links to Rfam database...	0.55	0.58	0.52	49	41521	46	8	38	0	35
ASE_00396	RNaseP_bact_a links to Rfam database...	0.57	0.58	0.56	48	41530	43	8	30	5	35
ASE_00397	RNaseP_bact_a links to Rfam database...	0.57	0.57	0.58	60	54511	46	3	41	2	45
ASE_00398	RNaseP_bact_a links to Rfam database...	0.66	0.64	0.68	67	55846	35	3	29	3	37
ASE_00400	RNaseP_bact_a links to Rfam database...	0.56	0.55	0.57	58	57869	44	4	39	1	48
ASE_00401	RNaseP_bact_a links to Rfam database...	0.56	0.56	0.56	70	76904	54	11	43	0	56
ASE_00402	RNaseP_bact_a links to Rfam database...	0.62	0.61	0.63	52	42403	34	6	25	3	33
ASE_00403	RNaseP_bact_a links to Rfam database...	0.46	0.44	0.47	47	55846	53	3	49	1	60
ASE_00404	RNaseP_bact_a links to Rfam database...	0.55	0.54	0.57	46	42990	42	0	35	7	39
ASE_00408	-	0.49	0.48	0.50	34	32317	39	2	32	5	37
ASE_00411	RNaseP_bact_a links to Rfam database...	0.35	0.36	0.34	32	49362	61	11	50	0	57
ASE_00413	RNaseP_bact_a links to Rfam database...	0.53	0.56	0.51	45	44462	44	14	30	0	36
ASE_00415	RNaseP_bact_a links to Rfam database...	0.43	0.44	0.42	45	54840	63	9	52	2	58
ASE_00416	RNaseP_bact_a links to Rfam database...	0.70	0.67	0.73	85	77305	38	2	29	7	42
ASE_00417	RNaseP_arch links to Rfam database...	0.36	0.37	0.35	37	54509	72	10	59	3	63
ASE_00418	RNaseP_arch links to Rfam database...	0.21	0.21	0.20	16	38702	65	12	51	2	59
ASE_00419	RNaseP_bact_a links to Rfam database...	0.77	0.74	0.81	76	54852	22	4	14	4	27
ASE_00420	RNaseP_nuc links to Rfam database...	0.65	0.68	0.61	43	43295	56	3	24	29	20
ASE_00422	RNaseP_bact_a links to Rfam database...	0.70	0.68	0.73	64	46883	31	5	19	7	30
ASE_00426	RNaseP_bact_a links to Rfam database...	0.40	0.40	0.41	43	60969	63	9	54	0	65
ASE_00427	RNaseP_nuc links to Rfam database...	0.15	0.20	0.12	9	40677	83	23	46	14	37
ASE_00428	RNaseP_bact_a links to Rfam database...	0.53	0.51	0.56	64	76521	55	5	46	4	61
ASE_00429	-	0.39	0.38	0.41	25	28142	44	1	35	8	41
ASE_00430	RNaseP_bact_a links to Rfam database...	0.64	0.62	0.66	60	46880	38	5	26	7	37
ASE_00431	RNaseP_bact_a links to Rfam database...	0.52	0.49	0.55	47	46274	44	4	35	5	48
ASE_00434	RNaseP_bact_b links to Rfam database...	0.63	0.59	0.66	65	68167	46	8	25	13	45
ASE_00437	RNaseP_bact_a links to Rfam database...	0.42	0.40	0.44	54	79278	69	5	64	0	81
ASE_00438	RNaseP_bact_a links to Rfam database...	0.48	0.44	0.52	51	65967	48	2	46	0	65
ASE_00441	RNaseP_bact_a links to Rfam database...	0.77	0.72	0.82	81	64162	30	2	16	12	31
ASE_00447	RNaseP_bact_a links to Rfam database...	0.50	0.47	0.52	55	60273	53	1	49	3	61
ASE_00448	RNaseP_bact_a links to Rfam database...	0.22	0.22	0.23	25	64150	92	6	80	6	87
ASE_00451	RNaseP_bact_a links to Rfam database...	0.63	0.59	0.68	74	70767	38	2	33	3	51
ASE_00452	-	0.88	0.87	0.89	34	20872	29	0	4	25	5
ASE_00453	-	0.87	0.85	0.90	44	34142	41	0	5	36	8
ASE_00454	RNaseP_nuc links to Rfam database...	0.51	0.51	0.52	32	43303	53	2	28	23	31
CRW_00001	-	0.45	0.44	0.46	93	3173737	661	15	95	551	116
CRW_00002	-	0.55	0.54	0.56	143	408803	127	31	83	13	121
CRW_00004	-	0.51	0.52	0.50	68	154154	101	8	60	33	63
CRW_00005	-	0.56	0.55	0.56	73	137945	80	10	47	23	59
CRW_00007	-	0.50	0.53	0.48	70	144845	81	26	50	5	63
CRW_00009	-	0.57	0.58	0.56	80	137933	86	9	53	24	58
CRW_00010	-	0.80	0.78	0.82	98	102711	38	6	16	16	28
CRW_00011	-	0.65	0.66	0.65	91	118200	61	8	42	11	47
CRW_00013	Intron_gpI links to Rfam database...	0.24	0.24	0.24	28	103624	107	18	70	19	87
CRW_00014	-	0.36	0.37	0.36	45	103615	91	13	67	11	78
CRW_00016	Intron_gpI links to Rfam database...	0.62	0.57	0.67	68	77320	45	5	28	12	52
CRW_00017	-	0.40	0.44	0.37	40	92126	88	18	51	19	51
CRW_00019	-	0.61	0.60	0.62	82	127633	70	10	40	20	55
CRW_00024	SSU_rRNA_archaea links to Rfam database...	0.77	0.76	0.78	347	1085158	132	19	77	36	111
CRW_00048	SSU_rRNA_bacteria links to Rfam database...	0.52	0.51	0.53	241	1170762	229	24	188	17	229
CRW_00054	SSU_rRNA_bacteria links to Rfam database...	0.44	0.43	0.44	195	1107376	258	28	217	13	261
CRW_00059	SSU_rRNA_bacteria links to Rfam database...	0.49	0.48	0.50	227	1172295	238	32	192	14	246
CRW_00061	SSU_rRNA_bacteria links to Rfam database...	0.51	0.51	0.52	241	1181493	233	41	178	14	235
CRW_00068	SSU_rRNA_bacteria links to Rfam database...	0.46	0.46	0.47	209	1108862	250	23	211	16	248
CRW_00096	SSU_rRNA_bacteria links to Rfam database...	0.55	0.54	0.55	250	1178428	227	29	173	25	215
CRW_00140	SSU_rRNA_bacteria links to Rfam database...	0.66	0.65	0.67	303	1135826	172	19	130	23	160
CRW_00141	SSU_rRNA_bacteria links to Rfam database...	0.58	0.58	0.59	275	1201557	219	25	168	26	201
CRW_00150	SSU_rRNA_bacteria links to Rfam database...	0.41	0.41	0.42	190	1152471	280	32	228	20	276
CRW_00152	SSU_rRNA_bacteria links to Rfam database...	0.65	0.63	0.66	299	1179965	174	29	123	22	172
CRW_00166	SSU_rRNA_bacteria links to Rfam database...	0.45	0.44	0.45	207	1190736	269	34	219	16	261
CRW_00173	SSU_rRNA_bacteria links to Rfam database...	0.28	0.28	0.29	126	1082215	327	39	276	12	319
CRW_00177	SSU_rRNA_bacteria links to Rfam database...	0.51	0.49	0.53	234	1178440	221	29	177	15	239
CRW_00196	SSU_rRNA_bacteria links to Rfam database...	0.45	0.44	0.45	211	1207765	281	32	227	22	264
CRW_00230	SSU_rRNA_bacteria links to Rfam database...	0.55	0.54	0.57	256	1198474	218	27	169	22	222
CRW_00245	SSU_rRNA_bacteria links to Rfam database...	0.36	0.36	0.37	163	1105885	293	45	235	13	290
CRW_00248	SSU_rRNA_bacteria links to Rfam database...	0.58	0.57	0.58	276	1218667	230	24	174	32	208
CRW_00250	SSU_rRNA_bacteria links to Rfam database...	0.39	0.39	0.39	186	1198451	301	43	246	12	292
CRW_00256	SSU_rRNA_bacteria links to Rfam database...	0.50	0.49	0.52	228	1192304	228	35	173	20	240
CRW_00270	SSU_rRNA_bacteria links to Rfam database...	0.47	0.45	0.48	207	1111853	250	29	197	24	248
CRW_00271	SSU_rRNA_bacteria links to Rfam database...	0.48	0.47	0.50	217	1122314	236	33	187	16	245
CRW_00273	SSU_rRNA_bacteria links to Rfam database...	0.51	0.50	0.52	222	1085175	222	28	176	18	224
CRW_00275	SSU_rRNA_bacteria links to Rfam database...	0.68	0.68	0.69	310	1114822	160	19	120	21	147
CRW_00277	SSU_rRNA_bacteria links to Rfam database...	0.35	0.34	0.35	154	1110361	293	42	238	13	299
CRW_00278	SSU_rRNA_bacteria links to Rfam database...	0.43	0.41	0.44	186	1129832	259	29	209	21	264
CRW_00279	SSU_rRNA_bacteria links to Rfam database...	0.44	0.42	0.45	197	1179977	258	31	211	16	267
CRW_00280	SSU_rRNA_bacteria links to Rfam database...	0.68	0.67	0.68	302	1117819	159	19	120	20	151
CRW_00281	SSU_rRNA_bacteria links to Rfam database...	0.65	0.63	0.67	291	1144909	165	18	123	24	173
CRW_00283	SSU_rRNA_bacteria links to Rfam database...	0.25	0.24	0.25	103	1015621	323	37	264	22	329
CRW_00284	SSU_rRNA_bacteria links to Rfam database...	0.29	0.28	0.29	129	1131319	325	39	273	13	327
CRW_00285	SSU_rRNA_bacteria links to Rfam database...	0.75	0.74	0.76	338	1117818	130	22	82	26	120
CRW_00289	SSU_rRNA_bacteria links to Rfam database...	0.44	0.43	0.45	203	1189200	274	30	220	24	273
CRW_00292	SSU_rRNA_bacteria links to Rfam database...	0.41	0.40	0.43	184	1123823	255	41	202	12	277
CRW_00294	-	0.31	0.33	0.29	191	2620252	546	107	355	84	395
CRW_00298	SSU_rRNA_eukarya links to Rfam database...	0.22	0.23	0.22	114	1620379	443	82	325	36	380
CRW_00301	SSU_rRNA_eukarya links to Rfam database...	0.31	0.31	0.30	163	1761959	431	87	294	50	356
CRW_00310	SSU_rRNA_eukarya links to Rfam database...	0.26	0.27	0.26	141	1805406	466	81	322	63	380
CRW_00326	SSU_rRNA_eukarya links to Rfam database...	0.35	0.35	0.35	176	1627600	377	65	269	43	326
CRW_00330	SSU_rRNA_eukarya links to Rfam database...	0.29	0.31	0.28	158	1988457	459	73	327	59	359
CRW_00332	SSU_rRNA_eukarya links to Rfam database...	0.21	0.22	0.20	104	1769488	470	103	326	41	373
CRW_00333	SSU_rRNA_eukarya links to Rfam database...	0.33	0.33	0.32	169	1891961	426	77	278	71	345
CRW_00338	-	0.15	0.16	0.14	64	1052953	413	75	334	4	331
CRW_00345	SSU_rRNA_eukarya links to Rfam database...	0.27	0.28	0.27	138	1586355	422	75	303	44	360
CRW_00348	SSU_rRNA_eukarya links to Rfam database...	0.26	0.26	0.26	131	1615002	412	57	313	42	372
CRW_00358	SSU_rRNA_eukarya links to Rfam database...	0.39	0.39	0.39	200	1674848	370	67	250	53	307
CRW_00366	SSU_rRNA_eukarya links to Rfam database...	0.33	0.35	0.32	167	1579237	391	83	266	42	315
CRW_00370	SSU_rRNA_eukarya links to Rfam database...	0.25	0.26	0.25	130	1640246	437	74	316	47	376
CRW_00371	SSU_rRNA_eukarya links to Rfam database...	0.31	0.32	0.30	159	1611384	399	75	292	32	337
CRW_00372	SSU_rRNA_eukarya links to Rfam database...	0.36	0.36	0.36	180	1625800	366	59	267	40	318
CRW_00374	-	0.44	0.44	0.44	244	2182449	395	57	255	83	306
CRW_00375	-	0.28	0.29	0.27	158	2298864	499	77	341	81	383
CRW_00379	SSU_rRNA_eukarya links to Rfam database...	0.40	0.40	0.39	215	2126404	429	56	278	95	319
CRW_00381	-	0.30	0.31	0.30	174	2303144	499	73	340	86	383
CRW_00386	SSU_rRNA_eukarya links to Rfam database...	0.25	0.27	0.24	137	1750675	476	78	366	32	378
CRW_00400	-	0.19	0.20	0.18	98	2677906	616	88	363	165	396
CRW_00403	SSU_rRNA_eukarya links to Rfam database...	0.31	0.31	0.30	146	1606048	418	64	270	84	318
CRW_00411	SSU_rRNA_eukarya links to Rfam database...	0.27	0.28	0.27	138	1614990	413	60	315	38	358
CRW_00414	SSU_rRNA_eukarya links to Rfam database...	0.30	0.31	0.29	154	1665688	426	77	306	43	341
CRW_00417	-	0.39	0.38	0.40	99	458154	161	21	129	11	163
CRW_00418	-	0.22	0.20	0.24	52	441115	174	21	142	11	208
CRW_00419	-	0.20	0.18	0.21	49	463930	194	17	170	7	216
CRW_00421	-	0.31	0.30	0.33	79	462964	173	28	132	13	187
CRW_00422	-	0.37	0.36	0.38	95	455287	170	24	129	17	168
CRW_00423	-	0.20	0.21	0.20	40	242353	171	28	135	8	149
CRW_00426	-	0.34	0.33	0.35	88	457193	175	23	142	10	177
CRW_00427	-	0.21	0.21	0.22	54	454337	205	33	157	15	207
CRW_00428	-	0.38	0.38	0.38	98	465840	170	32	125	13	162
CRW_00429	-	0.12	0.12	0.12	29	306700	211	29	178	4	204
CRW_00430	-	0.45	0.42	0.49	112	456262	128	20	96	12	154
CRW_00433	-	0.29	0.26	0.32	68	467817	148	21	122	5	195
CRW_00434	-	0.31	0.29	0.33	75	457220	157	19	132	6	188
CRW_00435	-	0.45	0.42	0.49	110	451500	126	9	106	11	155
CRW_00437	-	0.21	0.21	0.22	54	456247	191	23	166	2	206
CRW_00438	-	0.34	0.32	0.37	87	454343	161	16	135	10	181
CRW_00441	-	0.17	0.16	0.18	42	454353	190	32	154	4	220
CRW_00442	-	0.38	0.36	0.40	94	453393	149	25	116	8	167
CRW_00443	-	0.38	0.36	0.41	93	456264	154	19	114	21	167
CRW_00444	-	0.30	0.29	0.32	76	459122	172	24	139	9	187
CRW_00445	-	0.30	0.28	0.33	75	458173	164	23	132	9	190
CRW_00446	-	0.36	0.33	0.38	88	468765	157	17	126	14	177
CRW_00447	-	0.33	0.32	0.35	82	452443	167	16	135	16	178
CRW_00448	-	0.34	0.33	0.36	85	457211	168	28	122	18	176
CRW_00449	-	0.15	0.15	0.16	38	444860	198	34	164	0	222
CRW_00451	-	0.24	0.22	0.26	59	457222	181	21	144	16	205
CRW_00452	-	0.29	0.26	0.31	69	453407	169	26	126	17	193
CRW_00453	-	0.23	0.21	0.24	56	452447	180	35	138	7	205
CRW_00458	-	0.46	0.44	0.48	115	464891	141	21	103	17	149
CRW_00459	-	0.55	0.51	0.58	135	462008	117	16	82	19	128
CRW_00460	-	0.30	0.30	0.30	161	1972561	446	49	320	77	383
CRW_00462	-	0.18	0.16	0.19	43	458180	198	21	159	18	218
CRW_00463	-	0.39	0.38	0.40	97	445799	154	21	123	10	157
CRW_00464	-	0.38	0.35	0.42	92	462021	139	14	114	11	172
CRW_00466	SSU_rRNA_bacteria links to Rfam database...	0.59	0.58	0.61	265	1116332	195	23	145	27	193
CRW_00474	-	0.45	0.44	0.45	371	3976793	477	67	379	31	465
CRW_00476	-	0.37	0.37	0.37	323	4278391	590	78	483	29	556
CRW_00487	-	0.48	0.47	0.49	409	4223041	450	72	349	29	463
CRW_00488	-	0.36	0.36	0.37	318	4325352	560	78	463	19	568
CRW_00490	-	0.40	0.39	0.40	339	4144915	541	70	436	35	523
CRW_00496	-	0.42	0.41	0.43	354	4194028	503	59	415	29	512
CRW_00497	-	0.40	0.40	0.40	329	4402212	539	70	417	52	493
CRW_00499	-	0.40	0.39	0.40	343	4372553	528	65	442	21	540
CRW_00503	-	0.41	0.41	0.42	354	4252133	529	73	426	30	513
CRW_00507	-	0.32	0.32	0.32	278	4173747	595	64	516	15	587
CRW_00509	-	0.46	0.45	0.48	392	4182454	467	68	364	35	475
CRW_00511	-	0.37	0.36	0.37	309	4107578	542	55	469	18	547
CRW_00512	-	0.50	0.50	0.51	409	3814897	424	61	336	27	410
CRW_00518	-	0.25	0.25	0.26	220	4357775	642	74	559	9	664
CRW_00519	-	0.55	0.55	0.54	461	4246298	452	57	339	56	371
CRW_00521	-	0.32	0.31	0.32	265	4136305	581	77	479	25	579
CRW_00525	-	0.30	0.31	0.28	254	4058917	690	83	571	36	559
CRW_00530	-	0.26	0.28	0.25	74	534802	233	55	164	14	194
CRW_00532	-	0.15	0.16	0.14	42	579121	281	61	202	18	223
CRW_00534	-	0.30	0.31	0.29	149	1832140	399	78	288	33	334
CRW_00535	-	0.26	0.28	0.25	91	898105	293	66	208	19	237
CRW_00538	-	0.19	0.20	0.18	59	811850	285	65	201	19	241
CRW_00545	-	0.19	0.21	0.17	40	1343749	405	57	134	214	153
CRW_00547	-	0.46	0.46	0.47	397	4278426	479	61	391	27	466
CRW_00548	5S_rRNA links to Rfam database...	0.84	0.76	0.94	29	7350	4	0	2	2	9
CRW_00552	5S_rRNA links to Rfam database...	0.33	0.31	0.36	12	7107	22	2	19	1	27
CRW_00555	5S_rRNA links to Rfam database...	0.78	0.70	0.88	28	7594	5	0	4	1	12
CRW_00567	5S_rRNA links to Rfam database...	0.69	0.63	0.76	25	7470	10	2	6	2	15
CRW_00570	5S_rRNA links to Rfam database...	0.88	0.89	0.87	33	6865	8	0	5	3	4
CRW_00589	SSU_rRNA_bacteria links to Rfam database...	0.28	0.27	0.29	121	1094037	315	38	264	13	324
CRW_00590	SSU_rRNA_bacteria links to Rfam database...	0.35	0.34	0.37	153	1119337	287	30	236	21	299
CRW_00591	SSU_rRNA_bacteria links to Rfam database...	0.56	0.54	0.58	243	1098483	208	22	155	31	203
CRW_00594	-	0.23	0.24	0.22	94	1028460	369	47	294	28	301
CRW_00596	-	0.21	0.22	0.20	85	1024169	356	69	273	14	301
CRW_00598	SSU_rRNA_eukarya links to Rfam database...	0.36	0.37	0.35	183	1665703	391	62	277	52	308
CRW_00599	-	0.35	0.36	0.34	195	3754588	700	77	310	313	351
CRW_00601	-	0.21	0.25	0.18	17	186869	152	36	44	72	51
CRW_00602	-	0.09	0.13	0.06	9	223966	188	72	68	48	59
CRW_00603	-	0.06	0.07	0.04	5	192398	173	51	56	66	63
CRW_00604	-	0.82	0.86	0.79	70	411689	188	10	9	169	11
CRW_00605	-	0.69	0.70	0.69	49	183850	123	6	16	101	21
CRW_00606	-	0.87	0.84	0.91	77	559068	251	0	8	243	15
CRW_00607	-	0.54	0.53	0.55	41	536056	268	10	23	235	36
CRW_00608	-	0.86	0.84	0.89	66	35704	18	0	8	10	13
CRW_00610	Intron_gpI links to Rfam database...	0.45	0.44	0.46	36	36236	43	6	37	0	45
CRW_00612	-	0.59	0.60	0.58	56	270383	169	1	40	128	37
CRW_00613	Intron_gpI links to Rfam database...	0.63	0.58	0.68	45	34914	29	1	20	8	33
CRW_00614	Intron_gpI links to Rfam database...	0.09	0.11	0.08	6	121694	140	20	51	69	51
CRW_00617	-	0.41	0.45	0.38	29	426349	237	15	33	189	35
CRW_00619	Intron_gpI links to Rfam database...	0.37	0.42	0.33	31	164931	138	28	35	75	42
CRW_00620	Intron_gpI links to Rfam database...	0.16	0.21	0.12	13	150870	160	31	61	68	50
CRW_00621	Intron_gpI links to Rfam database...	0.25	0.25	0.26	18	153111	144	9	43	92	53
CRW_00623	Intron_gpI links to Rfam database...	0.31	0.29	0.32	24	129721	119	11	39	69	59
CRW_00626	-	0.57	0.58	0.57	60	100920	70	9	36	25	44
CRW_00629	-	0.52	0.52	0.52	64	91256	60	18	40	2	58
CRW_00633	Intron_gpI links to Rfam database...	0.69	0.67	0.71	71	63446	33	8	21	4	35
CRW_00635	-	0.45	0.45	0.45	61	109142	85	10	65	10	76
CRW_00637	-	0.47	0.47	0.47	74	133745	90	17	67	6	84
CRW_00641	-	0.44	0.46	0.43	35	39821	56	9	38	9	41
CRW_00642	-	0.41	0.45	0.38	29	47201	56	12	36	8	36
CRW_00643	-	0.45	0.48	0.42	59	123115	93	27	55	11	63
CRW_00645	-	0.77	0.81	0.74	54	35438	28	8	11	9	13
CRW_00646	-	0.51	0.53	0.50	34	34912	39	6	28	5	30
CRW_00648	-	0.60	0.63	0.57	93	137911	74	17	54	3	55
CRW_00649	-	0.60	0.61	0.59	76	204352	121	2	50	69	48
CRW_00650	-	0.52	0.51	0.52	73	112910	71	9	58	4	69
CRW_00652	-	0.57	0.57	0.58	74	132227	81	7	47	27	56
CRW_00654	-	0.70	0.67	0.73	83	78096	36	4	27	5	41
CRW_00655	-	0.87	0.85	0.89	106	89134	18	7	6	5	18
CRW_00659	-	0.37	0.41	0.34	25	32312	52	16	32	4	36
CRW_00661	-	0.20	0.22	0.18	11	24249	52	16	34	2	40
CRW_00662	-	0.36	0.37	0.36	24	28613	50	7	36	7	41
CRW_00663	-	0.00	0.00	0.00	0	26039	67	11	56	0	61
CRW_00664	-	0.17	0.18	0.16	14	53538	79	16	60	3	64
CRW_00665	-	0.17	0.19	0.16	9	23596	51	10	38	3	39
CRW_00666	-	0.51	0.52	0.50	65	96010	78	11	55	12	61
CRW_00668	-	0.36	0.38	0.33	57	163707	126	24	90	12	93
CRW_00669	-	0.39	0.40	0.39	48	97337	78	18	58	2	71
CRW_00670	Intron_gpI links to Rfam database...	0.79	0.74	0.83	89	70018	21	6	12	3	31
CRW_00671	Intron_gpI links to Rfam database...	0.65	0.62	0.68	72	62729	39	7	27	5	45
CRW_00672	Intron_gpI links to Rfam database...	0.48	0.49	0.47	54	72275	65	19	42	4	57
CRW_00674	Intron_gpI links to Rfam database...	0.58	0.56	0.62	69	83324	45	7	36	2	55
CRW_00676	Intron_gpI links to Rfam database...	0.54	0.55	0.53	63	93410	69	15	40	14	52
CRW_00677	-	0.53	0.53	0.52	56	71902	59	13	39	7	49
CRW_00678	-	0.41	0.45	0.37	55	666287	299	23	70	206	66
CRW_00679	-	0.22	0.22	0.22	24	76525	93	14	73	6	83
CRW_00681	-	0.46	0.50	0.43	56	112920	87	19	55	13	56
CRW_00684	-	0.35	0.37	0.32	50	612016	279	36	69	174	85
CRW_00685	-	0.39	0.42	0.36	45	156956	113	21	58	34	61
CRW_00687	-	0.66	0.70	0.62	46	28606	32	8	20	4	20
CRW_00689	-	0.65	0.68	0.63	52	33588	32	11	19	2	25
CRW_00690	-	0.62	0.59	0.64	41	33347	30	7	16	7	28
CRW_00691	-	0.58	0.60	0.56	40	27190	33	6	25	2	27
CRW_00692	Intron_gpI links to Rfam database...	0.20	0.21	0.19	19	68537	84	24	55	5	71
CRW_00693	-	0.58	0.57	0.58	70	89133	59	7	43	9	52
CRW_00694	-	0.63	0.63	0.63	77	85782	52	6	40	6	45
CRW_00699	-	0.62	0.61	0.62	77	91682	48	6	41	1	49
CRW_00700	-	0.63	0.63	0.63	93	180753	87	11	44	32	54
CRW_00704	-	0.80	0.79	0.82	74	386670	190	4	12	174	20
CRW_00706	-	0.37	0.41	0.34	24	695539	343	11	36	296	35
CRW_00708	-	0.49	0.65	0.37	43	3457019	742	55	18	669	23
CRW_00709	-	0.23	0.22	0.24	19	1728790	569	8	53	508	66
CRW_00710	-	0.66	0.65	0.67	74	1040293	368	8	28	332	40
CRW_00711	-	0.28	0.30	0.26	37	2318636	603	35	73	495	87
CRW_00712	-	0.46	0.53	0.40	57	952749	364	30	54	280	51
CRW_00713	-	0.67	0.65	0.69	66	731349	298	5	25	268	35
CRW_00714	-	0.20	0.22	0.18	24	186224	160	28	79	53	83
CRW_00715	-	0.76	0.73	0.78	76	69281	24	3	18	3	28
CRW_00716	-	0.34	0.34	0.34	30	193664	145	10	49	86	59
CRW_00717	-	0.66	0.66	0.66	98	153587	65	8	42	15	50
CRW_00718	-	0.78	0.74	0.82	142	189862	49	3	29	17	49
CRW_00719	-	0.56	0.57	0.55	52	230087	143	9	33	101	39
CRW_00721	-	0.52	0.59	0.47	40	58567	61	17	29	15	28
CRW_00723	-	0.46	0.57	0.37	42	1583195	497	40	33	424	32
CRW_00725	-	0.45	0.51	0.40	89	1957011	506	34	97	375	85
CRW_00727	-	0.41	0.48	0.36	56	303654	173	45	55	73	61
CRW_00728	-	0.30	0.34	0.26	40	272538	181	28	85	68	79
CRW_00729	-	0.21	0.24	0.18	29	191112	143	38	92	13	92
CRW_00730	-	0.51	0.55	0.48	88	338891	172	28	69	75	73
CRW_00732	-	0.36	0.44	0.28	52	3401953	710	70	61	579	65
CRW_00733	-	0.31	0.37	0.27	40	216661	167	37	73	57	69
CRW_00734	-	0.19	0.25	0.15	27	536983	264	76	80	108	83
CRW_00735	-	0.26	0.37	0.18	45	677784	313	116	85	112	76
CRW_00736	-	0.13	0.15	0.12	20	241687	186	40	113	33	111
CRW_00737	-	0.28	0.36	0.22	41	295879	175	73	72	30	73
CRW_00738	-	0.43	0.45	0.40	62	287507	176	21	71	84	75
CRW_00739	-	0.26	0.28	0.24	38	284474	186	25	98	63	97
CRW_00740	-	0.01	0.02	0.01	2	489366	281	77	110	94	111
CRW_00741	-	0.43	0.47	0.40	63	250122	128	32	61	35	72
CRW_00742	-	0.42	0.49	0.36	83	1723063	498	56	94	348	85
CRW_00744	-	0.71	0.78	0.65	145	3433288	702	37	40	625	41
CRW_00745	-	0.41	0.48	0.36	74	1343772	403	51	83	269	80
CRW_00746	-	0.55	0.58	0.52	128	550477	181	33	87	61	91
CRW_00747	-	0.16	0.18	0.15	34	3722125	790	49	148	593	154
CRW_00750	-	0.39	0.44	0.35	70	709638	293	37	91	165	90
CRW_00752	-	0.34	0.41	0.28	76	2975313	664	68	123	473	108
CRW_00753	-	0.07	0.07	0.06	13	489343	289	36	163	90	165
CRW_00756	-	0.70	0.70	0.70	120	194829	63	7	44	12	52
CRW_00758	SSU_rRNA_eukarya links to Rfam database...	0.28	0.29	0.27	138	1640264	418	60	304	54	345
CRW_00759	SSU_rRNA_eukarya links to Rfam database...	0.23	0.24	0.22	117	1636617	466	66	345	55	364
CRW_00760	SSU_rRNA_eukarya links to Rfam database...	0.31	0.31	0.32	151	1638482	393	57	265	71	335
CRW_00761	-	0.20	0.21	0.19	98	2863901	663	82	340	241	376
CRW_00763	SSU_rRNA_bacteria links to Rfam database...	0.29	0.27	0.30	122	1215612	330	26	260	44	324
CRW_00764	-	0.08	0.08	0.08	15	252920	182	41	140	1	181
CRW_00766	-	0.23	0.22	0.23	53	440165	188	28	145	15	187
CRW_00768	-	0.56	0.54	0.58	141	471663	124	14	88	22	118
CRW_00769	-	0.37	0.35	0.39	88	451499	151	24	114	13	164
CRW_00772	SSU_rRNA_bacteria links to Rfam database...	0.25	0.25	0.26	101	945612	317	39	248	30	303
CRW_00774	-	0.34	0.32	0.37	85	488335	171	20	126	25	178
CRW_00775	-	0.12	0.12	0.11	26	314584	213	61	150	2	186
CRW_00778	SSU_rRNA_bacteria links to Rfam database...	0.32	0.32	0.33	123	1201647	309	46	209	54	261
CRW_00779	-	0.29	0.28	0.29	120	1031355	310	39	252	19	302
CRW_00780	-	0.36	0.35	0.37	89	475561	163	24	126	13	166
CRW_00781	-	0.18	0.20	0.17	90	1978527	535	77	361	97	360
CRW_00783	-	0.35	0.34	0.36	87	453385	167	15	141	11	172
CRW_00784	-	0.34	0.33	0.36	86	456249	169	29	126	14	176
CRW_00785	-	0.30	0.29	0.32	73	452445	165	31	127	7	180
CRW_00787	-	0.23	0.24	0.23	72	646633	257	40	208	9	234
CRW_00788	-	0.35	0.36	0.34	131	1758365	426	62	192	172	230
CRW_00789	SSU_rRNA_bacteria links to Rfam database...	0.34	0.33	0.34	147	1137356	300	35	248	17	300
CRW_00790	-	0.16	0.17	0.15	74	1803544	496	75	357	64	373
CRW_00792	-	0.24	0.26	0.23	99	1581092	444	81	259	104	284
CRW_00793	-	0.32	0.33	0.31	124	1048682	323	53	217	53	253
CRW_00794	-	0.23	0.23	0.23	56	434530	209	20	172	17	190
CRW_00795	SSU_rRNA_bacteria links to Rfam database...	0.19	0.20	0.19	78	1152508	377	53	282	42	316
CRW_00796	-	0.25	0.23	0.26	55	384793	177	24	131	22	180
CRW_00797	-	0.29	0.29	0.29	98	692914	265	38	203	24	244
CRW_00800	SSU_rRNA_eukarya links to Rfam database...	0.51	0.51	0.52	238	1401519	271	33	185	53	232
CRW_00801	-	0.46	0.45	0.46	113	438272	150	28	103	19	136
CRW_00802	-	0.25	0.24	0.25	61	460079	192	36	144	12	192
CRW_00804	-	0.34	0.34	0.33	137	1420043	397	43	232	122	266
CRW_00807	-	0.25	0.26	0.25	102	1391535	411	56	253	102	296
CRW_00808	-	0.20	0.21	0.19	74	1301303	411	68	246	97	282
CRW_00815	-	0.56	0.56	0.56	88	159739	78	15	53	10	70
CRW_00816	-	0.36	0.38	0.35	49	143775	111	18	74	19	80
CRW_00820	-	0.56	0.57	0.55	83	136352	79	16	52	11	62
CRW_00849	SSU_rRNA_bacteria links to Rfam database...	0.48	0.48	0.49	225	1117800	258	25	210	23	245
CRW_01134	-	0.34	0.33	0.34	142	964943	281	42	228	11	285
CRW_01153	SSU_rRNA_eukarya links to Rfam database...	0.25	0.25	0.25	128	1606016	421	65	319	37	375
CRW_01168	-	0.33	0.33	0.33	136	900740	294	43	234	17	275
CRW_01171	SSU_rRNA_eukarya links to Rfam database...	0.24	0.24	0.24	123	1593484	433	84	314	35	383
CRW_01186	-	0.23	0.23	0.23	89	836190	303	44	248	11	297
CRW_01188	-	0.11	0.11	0.11	42	837482	347	50	291	6	351
CRW_01189	-	0.19	0.19	0.19	74	862254	323	55	258	10	318
CRW_01214	-	0.35	0.33	0.36	135	931923	248	39	198	11	270
CRW_01222	-	0.24	0.24	0.25	96	912886	298	54	240	4	301
CRW_01250	-	0.24	0.23	0.24	87	781517	284	38	233	13	291
CRW_01260	-	0.14	0.13	0.14	52	912906	325	45	273	7	341
CRW_01266	-	0.24	0.24	0.24	91	818175	306	39	255	12	290
CRW_01275	-	0.32	0.32	0.32	139	1082223	310	46	248	16	293
CRW_01283	-	0.37	0.36	0.38	149	963574	261	40	203	18	260
CRW_01300	SSU_rRNA_eukarya links to Rfam database...	0.37	0.37	0.36	193	1693178	383	91	258	34	322
CRW_01314	-	0.23	0.22	0.24	91	937383	301	38	253	10	316
CRW_01343	SSU_rRNA_archaea links to Rfam database...	0.35	0.35	0.35	151	977475	287	44	231	12	283
CRW_01344	-	0.34	0.33	0.34	122	791557	238	42	190	6	244
CRW_01456	-	0.29	0.30	0.29	253	4240458	631	87	530	14	598
CRW_01484	5S_rRNA links to Rfam database...	0.18	0.18	0.18	7	7464	33	4	28	1	32
CRW_01485	5S_rRNA links to Rfam database...	0.19	0.18	0.21	7	7469	27	1	26	0	32
CRW_01487	5S_rRNA links to Rfam database...	0.16	0.15	0.18	6	7469	28	3	25	0	35
CRW_01489	5S_rRNA links to Rfam database...	0.82	0.74	0.91	29	7471	5	0	3	2	10
CRW_01491	5S_rRNA links to Rfam database...	0.73	0.65	0.82	28	8351	9	0	6	3	15
CRW_01496	5S_rRNA links to Rfam database...	0.83	0.70	0.97	31	8096	7	0	1	6	13
CRW_01497	5S_rRNA links to Rfam database...	0.85	0.78	0.94	31	7107	5	0	2	3	9
CRW_01498	5S_rRNA links to Rfam database...	0.88	0.81	0.95	35	8091	4	0	2	2	8
CRW_01499	5S_rRNA links to Rfam database...	0.58	0.56	0.61	23	7963	16	2	13	1	18
CRW_01500	5S_rRNA links to Rfam database...	0.86	0.79	0.94	30	7718	5	0	2	3	8
CRW_01502	5S_rRNA links to Rfam database...	0.92	0.91	0.93	42	8340	7	0	3	4	4
CRW_01507	5S_rRNA links to Rfam database...	0.84	0.80	0.87	33	7465	7	0	5	2	8
CRW_01508	5S_rRNA links to Rfam database...	0.90	0.86	0.95	36	7963	7	0	2	5	6
CRW_01521	5S_rRNA links to Rfam database...	0.71	0.67	0.75	24	6871	12	0	8	4	12
CRW_01536	5S_rRNA links to Rfam database...	0.88	0.86	0.89	32	6985	4	0	4	0	5
CRW_01537	5S_rRNA links to Rfam database...	0.73	0.65	0.83	24	7111	11	0	5	6	13
CRW_01539	5S_rRNA links to Rfam database...	0.81	0.73	0.90	27	7110	9	0	3	6	10
CRW_01541	5S_rRNA links to Rfam database...	0.87	0.84	0.91	31	7106	7	0	3	4	6
CRW_01548	5S_rRNA links to Rfam database...	0.77	0.73	0.82	27	6988	11	0	6	5	10
CRW_01559	5S_rRNA links to Rfam database...	0.77	0.73	0.82	27	7227	12	0	6	6	10
CRW_01562	5S_rRNA links to Rfam database...	0.83	0.78	0.88	29	7107	9	0	4	5	8
CRW_01563	5S_rRNA links to Rfam database...	0.61	0.54	0.69	20	6874	10	2	7	1	17
CRW_01566	5S_rRNA links to Rfam database...	0.76	0.73	0.79	27	7106	11	0	7	4	10
CRW_01570	5S_rRNA links to Rfam database...	0.80	0.73	0.87	27	7109	10	0	4	6	10
CRW_01572	5S_rRNA links to Rfam database...	0.27	0.24	0.30	9	6991	21	4	17	0	28
CRW_01578	5S_rRNA links to Rfam database...	0.79	0.70	0.90	26	7111	7	0	3	4	11
CRW_01580	5S_rRNA links to Rfam database...	0.62	0.54	0.71	20	7112	14	0	8	6	17
CRW_01581	5S_rRNA links to Rfam database...	0.30	0.27	0.34	10	7111	20	0	19	1	27
CRW_01583	5S_rRNA links to Rfam database...	0.80	0.76	0.85	28	7107	9	0	5	4	9
CRW_01590	5S_rRNA links to Rfam database...	0.29	0.30	0.29	11	7102	27	6	21	0	26
CRW_01603	5S_rRNA links to Rfam database...	0.84	0.78	0.91	29	7108	7	0	3	4	8
CRW_01605	5S_rRNA links to Rfam database...	0.72	0.65	0.80	24	7110	10	0	6	4	13
CRW_01608	5S_rRNA links to Rfam database...	0.86	0.81	0.91	30	8352	4	0	3	1	7
CRW_01613	5S_rRNA links to Rfam database...	0.83	0.78	0.88	29	6988	7	0	4	3	8
CRW_01620	5S_rRNA links to Rfam database...	0.89	0.89	0.89	33	6984	7	0	4	3	4
CRW_01621	5S_rRNA links to Rfam database...	0.70	0.68	0.74	25	7106	13	0	9	4	12
CRW_01623	5S_rRNA links to Rfam database...	0.87	0.81	0.94	30	7108	3	0	2	1	7
NDB_00014	-	0.89	0.80	1.00	8	182	0	0	0	0	2
NDB_00015	-	0.38	0.40	0.40	4	266	6	0	6	0	6
NDB_00016	-	0.91	0.83	1.00	10	266	0	0	0	0	2
NDB_00047	-	0.91	0.83	1.00	10	266	0	0	0	0	2
NDB_00048	-	-0.02	0.00	0.00	0	1514	26	0	26	0	28
NDB_00049	-	0.92	0.85	1.00	11	314	0	0	0	0	2
PDB_00001	-	-0.03	0.00	0.00	0	270	6	0	6	0	12
PDB_00002	-	0.87	0.88	0.88	7	202	1	0	1	0	1
PDB_00003	-	0.81	0.67	1.00	8	343	0	0	0	0	4
PDB_00004	-	0.79	0.63	1.00	12	808	0	0	0	0	7
PDB_00006	-	1.00	1.00	1.00	14	689	0	0	0	0	0
PDB_00011	-	0.91	0.83	1.00	10	266	0	0	0	0	2
PDB_00012	mir-TAR links to Rfam database...	1.00	1.00	1.00	7	399	3	0	0	3	0
PDB_00013	-	1.00	1.00	1.00	10	396	1	0	0	1	0
PDB_00017	-	0.77	0.60	1.00	9	694	0	0	0	0	6
PDB_00018	-	0.20	0.20	0.22	4	1017	14	2	12	0	16
PDB_00019	-	0.74	0.75	0.75	6	245	2	0	2	0	2
PDB_00020	-	0.38	0.35	0.44	7	764	9	0	9	0	13
PDB_00021	-	1.00	1.00	1.00	8	182	0	0	0	0	0
PDB_00022	-	0.94	0.89	1.00	8	245	0	0	0	0	1
PDB_00032	-	0.81	0.67	1.00	10	893	1	0	0	1	5
PDB_00034	-	0.86	0.75	1.00	9	369	0	0	0	0	3
PDB_00035	-	0.94	0.89	1.00	8	202	0	0	0	0	1
PDB_00036	-	-0.01	0.00	0.00	0	3464	24	1	21	2	27
PDB_00039	-	-0.01	0.00	0.00	0	5318	38	0	38	0	45
PDB_00040	-	0.83	0.70	1.00	7	269	0	0	0	0	3
PDB_00043	-	0.87	0.77	1.00	10	425	0	0	0	0	3
PDB_00048	-	1.00	1.00	1.00	9	291	1	0	0	1	0
PDB_00049	-	0.83	0.70	1.00	7	224	0	0	0	0	3
PDB_00054	-	0.70	0.50	1.00	5	185	0	0	0	0	5
PDB_00056	-	0.93	0.88	1.00	14	616	0	0	0	0	2
PDB_00057	-	1.00	1.00	1.00	10	341	1	0	0	1	0
PDB_00065	-	0.77	0.60	1.00	6	400	1	0	0	1	4
PDB_00072	-	0.38	0.39	0.38	81	148025	134	10	124	0	129
PDB_00074	-	-0.03	0.00	0.00	0	370	8	0	8	0	12
PDB_00078	-	0.44	0.42	0.48	48	49669	53	6	47	0	67
PDB_00079	-	0.64	0.60	0.68	85	121646	69	9	31	29	57
PDB_00081	-	0.94	0.89	1.00	8	182	0	0	0	0	1
PDB_00088	-	0.86	0.75	1.00	9	426	1	0	0	1	3
PDB_00096	-	0.82	0.75	0.90	9	315	1	0	1	0	3
PDB_00098	-	0.81	0.67	1.00	4	227	0	0	0	0	2
PDB_00104	-	-0.02	0.00	0.00	0	618	12	0	12	0	16
PDB_00107	-	0.95	0.91	1.00	10	455	1	0	0	1	1
PDB_00108	-	1.00	1.00	1.00	7	203	0	0	0	0	0
PDB_00110	-	1.00	1.00	1.00	7	246	0	0	0	0	0
PDB_00113	-	0.94	0.89	1.00	8	223	0	0	0	0	1
PDB_00115	-	-0.03	0.00	0.00	0	547	14	0	14	0	16
PDB_00116	-	0.70	0.50	1.00	3	228	0	0	0	0	3
PDB_00119	-	0.95	0.90	1.00	9	244	0	0	0	0	1
PDB_00120	-	0.95	0.90	1.00	9	222	0	0	0	0	1
PDB_00121	-	0.95	0.90	1.00	9	222	0	0	0	0	1
PDB_00122	-	0.91	0.83	1.00	10	290	0	0	0	0	2
PDB_00123	-	-0.01	0.00	0.00	0	4151	35	0	35	0	36
PDB_00125	-	-0.03	0.00	0.00	0	225	6	0	6	0	10
PDB_00130	-	1.00	1.00	1.00	6	270	2	0	0	2	0
PDB_00132	-	0.86	0.75	1.00	9	426	0	0	0	0	3
PDB_00136	-	0.90	0.85	0.96	22	2392	1	0	1	0	4
PDB_00138	-	0.79	0.63	1.00	5	373	0	0	0	0	3
PDB_00142	-	0.91	0.83	1.00	10	425	0	0	0	0	2
PDB_00149	-	0.89	0.80	1.00	12	691	0	0	0	0	3
PDB_00150	-	0.95	0.90	1.00	9	291	1	0	0	1	1
PDB_00153	-	0.95	0.90	1.00	9	244	0	0	0	0	1
PDB_00155	-	0.70	0.50	1.00	4	321	0	0	0	0	4
PDB_00157	-	0.28	0.24	0.33	7	3300	17	0	14	3	22
PDB_00158	-	0.77	0.60	1.00	12	849	0	0	0	0	8
PDB_00159	-	0.73	0.55	1.00	6	345	1	0	0	1	5
PDB_00160	-	0.94	0.89	1.00	8	268	0	0	0	0	1
PDB_00168	-	0.66	0.67	0.67	4	294	3	1	1	1	2
PDB_00169	-	0.83	0.70	1.00	7	224	0	0	0	0	3
PDB_00170	-	0.80	0.75	0.86	12	616	2	0	2	0	4
PDB_00171	-	0.81	0.67	1.00	8	427	0	0	0	0	4
PDB_00174	-	0.90	0.82	1.00	18	1017	0	0	0	0	4
PDB_00178	-	0.90	0.82	1.00	9	519	1	0	0	1	2
PDB_00181	-	0.88	0.78	1.00	7	224	0	0	0	0	2
PDB_00182	-	0.88	0.78	1.00	7	246	0	0	0	0	2
PDB_00183	-	0.88	0.78	1.00	18	1467	0	0	0	0	5
PDB_00184	-	0.87	0.77	1.00	10	551	0	0	0	0	3
PDB_00185	-	0.55	0.50	0.61	14	2903	10	0	9	1	14
PDB_00190	-	0.95	0.90	1.00	9	222	0	0	0	0	1
PDB_00192	-	0.17	0.14	0.24	5	3219	16	0	16	0	31
PDB_00195	-	-0.01	0.00	0.00	0	3452	34	0	34	0	42
PDB_00197	-	1.00	1.00	1.00	7	293	3	0	0	3	0
PDB_00200	-	0.94	0.89	1.00	8	202	0	0	0	0	1
PDB_00201	-	0.77	0.60	1.00	6	319	0	0	0	0	4
PDB_00202	-	0.96	0.93	1.00	13	548	1	0	0	1	1
PDB_00203	-	0.96	0.92	1.00	12	549	0	0	0	0	1
PDB_00205	-	0.84	0.71	1.00	10	425	0	0	0	0	4
PDB_00206	-	1.00	1.00	1.00	8	268	0	0	0	0	0
PDB_00207	-	0.92	0.86	1.00	12	366	0	0	0	0	2
PDB_00209	-	0.56	0.45	0.71	5	554	2	0	2	0	6
PDB_00211	-	0.89	0.80	1.00	8	182	0	0	0	0	2
PDB_00213	Gammaretro_CES links to Rfam database...	0.92	0.85	1.00	35	5015	0	0	0	0	6
PDB_00214	-	0.73	0.55	1.00	6	400	0	0	0	0	5
PDB_00215	-	-0.02	0.00	0.00	0	1106	22	0	22	0	24
PDB_00219	-	1.00	1.00	1.00	7	203	0	0	0	0	0
PDB_00221	-	0.88	0.78	1.00	7	246	0	0	0	0	2
PDB_00224	-	0.93	0.88	1.00	7	183	0	0	0	0	1
PDB_00234	-	0.81	0.67	1.00	8	268	0	0	0	0	4
PDB_00236	-	-0.02	0.00	0.00	0	1110	18	0	18	0	24
PDB_00237	-	0.88	0.78	1.00	7	371	1	0	0	1	2
PDB_00239	-	0.78	0.61	1.00	11	809	0	0	0	0	7
PDB_00243	-	0.63	0.58	0.70	7	620	3	0	3	0	5
PDB_00248	-	0.86	0.75	1.00	9	267	0	0	0	0	3
PDB_00249	-	-0.02	0.00	0.00	0	274	2	0	2	0	11
PDB_00250	-	0.77	0.64	0.94	16	1753	3	0	1	2	9
PDB_00252	-	0.81	0.67	1.00	10	770	2	0	0	2	5
PDB_00254	-	-0.04	0.00	0.00	0	266	10	0	10	0	12
PDB_00257	-	0.95	0.91	1.00	10	341	0	0	0	0	1
PDB_00261	-	0.86	0.75	1.00	12	484	0	0	0	0	4
PDB_00262	-	0.25	0.25	0.27	6	1106	16	0	16	0	18
PDB_00267	-	-0.03	0.00	0.00	0	366	12	0	12	0	14
PDB_00278	-	0.19	0.19	0.19	14	24904	58	7	51	0	58
PDB_00286	-	-0.03	0.00	0.00	0	184	8	0	6	2	6
PDB_00312	-	1.00	1.00	1.00	9	426	0	0	0	0	0
PDB_00317	-	1.00	1.00	1.00	10	368	0	0	0	0	0
PDB_00339	-	0.75	0.56	1.00	9	657	0	0	0	0	7
PDB_00341	-	0.20	0.19	0.25	3	691	9	0	9	0	13
PDB_00342	-	-0.02	0.00	0.00	0	762	18	0	18	0	10
PDB_00343	-	0.68	0.62	0.76	13	1579	5	0	4	1	8
PDB_00347	-	0.83	0.70	1.00	14	1162	0	0	0	0	6
PDB_00349	-	0.64	0.64	0.64	9	932	5	0	5	0	5
PDB_00351	-	-0.02	0.00	0.00	0	554	7	0	7	0	12
PDB_00352	-	0.89	0.79	1.00	15	1210	0	0	0	0	4
PDB_00357	-	-0.01	0.00	0.00	0	770	10	4	6	0	10
PDB_00358	-	0.00	0.00	0.00	0	10539	46	6	40	0	47
PDB_00365	-	0.96	0.93	1.00	13	422	0	0	0	0	1
PDB_00371	-	0.89	0.80	1.00	12	549	0	0	0	0	3
PDB_00377	-	1.00	1.00	1.00	12	516	0	0	0	0	0
PDB_00378	-	0.96	0.93	1.00	13	690	0	0	0	0	1
PDB_00400	-	-0.01	0.00	0.00	0	3140	20	0	20	0	34
PDB_00401	-	0.47	0.43	0.50	413	3996557	440	40	368	32	540
PDB_00402	tRNA links to Rfam database...	0.27	0.30	0.26	7	2748	20	2	18	0	16
PDB_00403	-	0.52	0.53	0.51	81	124592	85	16	61	8	72
PDB_00411	-	0.81	0.67	1.00	10	585	0	0	0	0	5
PDB_00417	-	0.11	0.11	0.11	6	14143	47	5	42	0	50
PDB_00420	-	0.89	0.80	1.00	8	488	3	0	0	3	2
PDB_00423	-	0.17	0.16	0.18	12	26731	53	2	51	0	62
PDB_00431	tRNA links to Rfam database...	0.77	0.75	0.79	15	2192	5	0	4	1	5
PDB_00433	-	0.18	0.18	0.20	6	6640	24	2	22	0	28
PDB_00447	-	0.44	0.39	0.52	17	7107	16	6	10	0	27
PDB_00454	-	0.84	0.81	0.87	26	2671	4	0	4	0	6
PDB_00481	-	-0.01	0.00	0.00	0	1871	20	0	20	0	26
PDB_00513	-	1.00	1.00	1.00	7	224	0	0	0	0	0
PDB_00522	-	0.58	0.56	0.63	10	1112	6	0	6	0	8
PDB_00526	-	-0.01	0.00	0.00	0	294	6	1	5	0	3
PDB_00527	-	-0.02	0.00	0.00	0	294	6	1	5	0	5
PDB_00537	-	0.94	0.89	1.00	8	398	0	0	0	0	1
PDB_00553	mir-TAR links to Rfam database...	1.00	1.00	1.00	11	454	0	0	0	0	0
PDB_00565	-	0.76	0.68	0.85	34	8088	7	0	6	1	16
PDB_00570	-	0.90	0.82	1.00	18	2260	0	0	0	0	4
PDB_00571	tRNA links to Rfam database...	0.21	0.20	0.24	5	3300	16	6	10	0	20
PDB_00573	-	0.75	0.71	0.80	24	6640	10	0	6	4	10
PDB_00584	-	0.58	0.47	0.73	8	1474	3	0	3	0	9
PDB_00599	-	0.96	0.93	1.00	13	548	0	0	0	0	1
PDB_00601	-	0.40	0.38	0.42	30	36243	42	6	36	0	49
PDB_00603	-	0.83	0.70	1.00	7	246	0	0	0	0	3
PDB_00611	-	-0.01	0.00	0.00	0	773	7	1	6	0	11
PDB_00617	-	0.95	0.90	1.00	9	267	0	0	0	0	1
PDB_00627	-	0.75	0.71	0.80	12	1638	5	0	3	2	5
PDB_00629	-	-0.01	0.00	0.00	0	1636	17	4	13	0	23
PDB_00637	-	0.93	0.90	0.95	19	2326	3	0	1	2	2
PDB_00648	-	0.96	0.92	1.00	12	849	0	0	0	0	1
PDB_00675	-	0.42	0.39	0.45	381	4167987	491	39	421	31	593
PDB_00679	-	0.10	0.11	0.10	6	17520	52	4	48	0	50
PDB_00681	-	-0.01	0.00	0.00	0	1256	19	2	17	0	19
PDB_00682	-	-0.03	0.00	0.00	0	484	12	0	12	0	16
PDB_00686	-	0.94	0.89	1.00	17	686	0	0	0	0	2
PDB_00687	-	0.35	0.33	0.40	4	620	6	0	6	0	8
PDB_00692	-	0.67	0.60	0.75	12	1209	4	0	4	0	8
PDB_00693	-	0.94	0.88	1.00	15	1161	0	0	0	0	2
PDB_00701	-	0.47	0.45	0.49	49	45351	52	5	46	1	60
PDB_00702	-	0.91	0.89	0.94	32	4337	4	0	2	2	4
PDB_00703	SSU_rRNA_bacteria links to Rfam database...	0.54	0.52	0.57	258	1073389	221	20	178	23	237
PDB_00704	-	0.52	0.48	0.56	465	4249241	401	49	315	37	508
PDB_00705	-	1.00	1.00	1.00	8	245	1	0	0	1	0
PDB_00709	-	-0.02	0.00	0.00	0	766	14	0	14	0	16
PDB_00710	-	-0.02	0.00	0.00	0	768	12	0	12	0	16
PDB_00713	-	0.43	0.43	0.45	9	1996	11	0	11	0	12
PDB_00716	HDV_ribozyme links to Rfam database...	-0.01	0.00	0.00	0	2677	24	5	19	0	23
PDB_00724	-	-0.01	0.00	0.00	0	2122	23	0	23	0	29
PDB_00725	-	0.89	0.80	1.00	12	583	0	0	0	0	3
PDB_00726	-	0.88	0.78	1.00	7	344	1	0	0	1	2
PDB_00727	-	1.00	1.00	1.00	7	554	3	0	0	3	0
PDB_00728	-	0.97	0.93	1.00	14	482	0	0	0	0	1
PDB_00733	-	0.23	0.23	0.23	7	2896	24	2	21	1	23
PDB_00734	-	0.83	0.70	1.00	7	224	0	0	0	0	3
PDB_00737	-	0.95	0.91	1.00	10	341	0	0	0	0	1
PDB_00740	-	0.73	0.55	1.00	6	225	0	0	0	0	5
PDB_00741	Entero_5_CRE links to Rfam database...	0.87	0.76	1.00	13	690	0	0	0	0	4
PDB_00746	-	0.95	0.89	1.00	34	4719	2	0	0	2	4
PDB_00747	-	0.66	0.60	0.73	48	24465	18	0	18	0	32
PDB_00750	-	0.79	0.76	0.82	37	11890	10	0	8	2	12
PDB_00751	-	0.87	0.77	1.00	10	585	2	0	0	2	3
PDB_00752	-	0.90	0.82	1.00	36	7345	2	0	0	2	8
PDB_00754	-	0.20	0.25	0.18	3	1468	16	4	10	2	9
PDB_00800	-	0.31	0.31	0.32	9	2052	19	0	19	0	20
PDB_00805	-	0.64	0.61	0.68	184	467756	111	11	77	23	118
PDB_00806	-	0.47	0.40	0.56	10	1812	9	0	8	1	15
PDB_00809	-	0.88	0.79	1.00	11	485	0	0	0	0	3
PDB_00810	s2m links to Rfam database...	0.91	0.82	1.00	14	1067	0	0	0	0	3
PDB_00815	-	0.58	0.56	0.63	5	622	4	0	3	1	4
PDB_00823	-	-0.03	0.00	0.00	0	186	4	0	4	0	9
PDB_00827	Intron_gpI links to Rfam database...	0.58	0.52	0.66	42	26964	23	1	21	1	39
PDB_00828	Purine links to Rfam database...	0.88	0.78	1.00	21	2464	0	0	0	0	6
PDB_00829	Purine links to Rfam database...	0.86	0.75	1.00	18	2260	0	0	0	0	6
PDB_00854	SSU_rRNA_bacteria links to Rfam database...	0.54	0.53	0.54	285	1500255	284	22	216	46	250
PDB_00855	-	1.00	1.00	1.00	10	455	1	0	0	1	0
PDB_00864	-	0.65	0.54	0.79	34	12998	9	0	9	0	29
PDB_00865	-	0.96	0.92	1.00	11	340	0	0	0	0	1
PDB_00870	-	-0.02	0.00	0.00	0	1109	19	0	19	0	16
PDB_00871	-	-0.02	0.00	0.00	0	1106	22	0	22	0	24
PDB_00873	-	-0.01	0.00	0.00	0	4514	46	0	46	0	48
PDB_00874	-	0.10	0.10	0.14	2	932	12	2	10	0	18
PDB_00876	HIV_FE links to Rfam database...	0.97	0.95	1.00	19	971	0	0	0	0	1
PDB_00878	-	0.96	0.92	1.00	11	485	0	0	0	0	1
PDB_00879	-	0.86	0.74	1.00	29	5021	2	0	0	2	10
PDB_00885	-	0.97	0.94	1.00	17	803	0	0	0	0	1
PDB_00886	-	-0.01	0.00	0.00	0	4148	38	0	38	0	40
PDB_00890	-	1.00	1.00	1.00	14	689	0	0	0	0	0
PDB_00891	-	-0.02	0.00	0.00	0	927	19	6	13	0	15
PDB_00892	-	-0.01	0.00	0.00	0	2534	22	4	18	0	15
PDB_00897	-	0.56	0.52	0.59	32	11422	22	2	20	0	29
PDB_00906	-	-0.01	0.00	0.00	0	6632	38	0	38	0	48
PDB_00917	-	0.49	0.47	0.51	45	35157	49	4	39	6	50
PDB_00919	RNaseP_bact_a links to Rfam database...	0.50	0.47	0.55	48	44165	43	3	37	3	55
PDB_00924	-	0.90	0.81	1.00	29	3626	0	0	0	0	7
PDB_00925	-	0.90	0.82	1.00	9	342	0	0	0	0	2
PDB_00928	-	0.66	0.63	0.71	5	293	2	0	2	0	3
PDB_00929	-	-0.02	0.00	0.00	0	768	12	0	12	0	20
PDB_00932	-	0.80	0.77	0.83	10	808	2	0	2	0	3
PDB_00937	-	0.94	0.89	1.00	16	614	0	0	0	0	2
PDB_00943	-	-0.01	0.00	0.00	0	1423	10	2	6	2	15
PDB_00945	-	0.95	0.90	1.00	9	456	0	0	0	0	1
PDB_00960	-	-0.03	0.00	0.00	0	394	12	2	10	0	10
PDB_00966	-	-0.03	0.00	0.00	0	245	8	2	6	0	7
PDB_00974	-	0.62	0.56	0.71	5	371	2	0	2	0	4
PDB_00979	-	0.33	0.29	0.37	14	11743	24	2	22	0	34
PDB_00980	-	0.41	0.44	0.38	18	11128	29	6	23	0	23
PDB_00985	-	0.04	0.05	0.04	3	30550	76	20	55	1	61
PDB_00986	-	0.72	0.64	0.82	9	424	2	0	2	0	5
PDB_00987	-	0.79	0.63	1.00	10	551	0	0	0	0	6
PDB_00989	-	0.79	0.72	0.87	26	2973	4	0	4	0	10
PDB_01000	-	0.45	0.50	0.42	15	10842	32	7	14	11	15
PDB_01009	tRNA links to Rfam database...	0.52	0.57	0.48	12	2460	13	5	8	0	9
PDB_01025	-	1.00	1.00	1.00	9	244	0	0	0	0	0
PDB_01035	-	0.94	0.88	1.00	23	1517	0	0	0	0	3
PDB_01040	-	0.30	0.30	0.32	6	1109	13	0	13	0	14
PDB_01044	-	1.00	1.00	1.00	16	930	3	0	0	3	0
PDB_01045	-	0.98	0.96	1.00	22	1203	1	0	0	1	1
PDB_01050	UnaL2 links to Rfam database...	0.92	0.85	1.00	11	619	2	0	0	2	2
PDB_01051	Telomerase-cil links to Rfam database...	0.88	0.85	0.92	11	891	5	0	1	4	2
PDB_01053	tRNA links to Rfam database...	1.00	1.00	1.00	16	1362	0	0	0	0	0
PDB_01054	-	0.46	0.47	0.45	20	11737	24	4	20	0	23
PDB_01056	-	0.94	0.89	1.00	8	245	1	0	0	1	1
PDB_01057	-	1.00	1.00	1.00	8	202	0	0	0	0	0
PDB_01060	-	-0.01	0.00	0.00	0	1992	24	0	24	0	21
PDB_01061	-	0.11	0.10	0.14	4	3132	24	0	24	0	36
PDB_01065	-	-0.03	0.00	0.00	0	225	6	0	6	0	10
PDB_01070	-	0.31	0.30	0.33	16	12671	34	2	31	1	38
PDB_01071	-	0.69	0.62	0.80	8	396	2	0	2	0	5
PDB_01074	-	-0.01	0.00	0.00	0	2746	29	3	26	0	25
PDB_01075	-	0.76	0.69	0.85	22	2389	4	0	4	0	10
PDB_01077	-	0.86	0.79	0.94	15	1937	2	0	1	1	4
PDB_01084	-	1.00	1.00	1.00	7	224	0	0	0	0	0
PDB_01088	SSU_rRNA_bacteria links to Rfam database...	0.39	0.37	0.41	202	1470973	322	44	251	27	345
PDB_01092	glmS links to Rfam database...	0.74	0.65	0.83	34	10112	8	1	6	1	18
PDB_01097	-	0.93	0.88	1.00	7	203	0	0	0	0	1
PDB_01099	-	0.85	0.73	1.00	8	268	0	0	0	0	3
PDB_01100	-	0.67	0.59	0.76	13	1468	4	0	4	0	9
PDB_01103	SSU_rRNA_bacteria links to Rfam database...	0.59	0.58	0.60	324	1605991	243	32	181	30	238
PDB_01105	SSU_rRNA_bacteria links to Rfam database...	0.60	0.58	0.61	315	1433457	227	14	185	28	225
PDB_01108	-	1.00	1.00	1.00	9	222	0	0	0	0	0
PDB_01117	-	0.80	0.65	1.00	11	769	0	0	0	0	6
PDB_01119	-	0.92	0.86	1.00	12	618	0	0	0	0	2
PDB_01120	SSU_rRNA_bacteria links to Rfam database...	0.47	0.44	0.50	232	1204667	242	27	202	13	295
PDB_01126	-	0.48	0.50	0.47	14	3051	18	2	14	2	14
PDB_01128	-	0.92	0.85	1.00	23	2752	0	0	0	0	4
PDB_01129	-	0.27	0.28	0.26	20	35434	62	15	42	5	51
PDB_01130	-	-0.01	0.00	0.00	0	1746	24	6	18	0	20
PDB_01133	-	1.00	1.00	1.00	10	341	0	0	0	0	0
PDB_01135	-	-0.02	0.00	0.00	0	397	9	2	7	0	9
PDB_01137	-	-0.02	0.00	0.00	0	321	4	2	2	0	8
PDB_01140	-	0.51	0.49	0.53	457	4176627	454	58	353	43	473
PDB_01144	-	0.28	0.26	0.31	33	82923	80	2	70	8	94
PDB_01145	-	1.00	1.00	1.00	14	766	2	0	0	2	0
PDB_01150	-	0.93	0.88	1.00	7	224	0	0	0	0	1
PDB_01152	HIV_FS2 links to Rfam database...	0.92	0.86	1.00	12	549	0	0	0	0	2
PDB_01154	-	0.90	0.82	1.00	9	397	0	0	0	0	2
PDB_01156	-	-0.01	0.00	0.00	0	3799	29	0	29	0	35
PDB_01157	-	0.29	0.29	0.30	28	49993	65	9	56	0	70
PDB_01160	-	0.34	0.35	0.33	7	2059	14	4	10	0	13
PDB_01162	-	0.55	0.56	0.56	5	1531	7	0	4	3	4
PDB_01163	-	0.98	0.95	1.00	21	1014	0	0	0	0	1
PDB_01166	-	0.44	0.42	0.46	88	181914	110	21	83	6	124
PDB_01167	-	0.86	0.75	1.00	6	184	0	0	0	0	2
PDB_01168	-	0.86	0.75	1.00	6	184	0	0	0	0	2
PDB_01178	-	0.84	0.71	1.00	10	518	0	0	0	0	4
PDB_01187	-	0.58	0.52	0.64	27	9969	16	0	15	1	25
PDB_01193	-	0.40	0.39	0.41	59	105885	94	13	73	8	92
PDB_01199	-	-0.01	0.00	0.00	0	2127	18	0	18	0	24
PDB_01205	-	-0.02	0.00	0.00	0	1015	20	4	16	0	18
PDB_01208	-	0.77	0.60	1.00	12	1164	0	0	0	0	8
PDB_01209	-	0.77	0.60	1.00	12	1164	0	0	0	0	8
PDB_01212	-	0.77	0.60	1.00	12	1164	0	0	0	0	8
PDB_01213	-	0.42	0.33	0.55	6	1070	5	0	5	0	12
PDB_01216	-	0.83	0.70	1.00	14	1162	0	0	0	0	6
PDB_01219	-	-0.02	0.00	0.00	0	928	18	0	18	0	20
PDB_01237	-	1.00	1.00	1.00	8	268	0	0	0	0	0
PDB_01249	-	0.33	0.33	0.33	18	11121	36	0	36	0	36
PDB_01251	-	0.87	0.77	1.00	10	315	0	0	0	0	3
PDB_01255	-	0.66	0.57	0.76	32	12519	16	0	10	6	24
PDB_01260	-	0.53	0.44	0.65	11	1813	6	0	6	0	14
PDB_01261	-	0.50	0.45	0.55	152	467750	130	4	122	4	184
PDB_01262	-	-0.03	0.00	0.00	0	185	5	0	5	0	8
PDB_01273	SSU_rRNA_bacteria links to Rfam database...	0.50	0.48	0.53	235	1117815	238	14	196	28	256
PDB_01281	-	-0.03	0.00	0.00	0	366	12	0	12	0	14
PDB_01299	-	0.74	0.67	0.83	10	891	2	1	1	0	5
PDB_01309	-	-0.01	0.00	0.00	0	9122	58	7	51	0	39
PDB_01313	-	-0.03	0.00	0.00	0	270	6	4	2	0	8
PDB_01325	-	0.91	0.83	1.00	10	266	0	0	0	0	2
PDB_01332	-	1.00	1.00	1.00	9	342	0	0	0	0	0
PDB_01337	-	-0.02	0.00	0.00	0	552	9	2	7	0	11
PDB_01338	-	-0.03	0.00	0.00	0	269	7	2	5	0	8
PDB_01340	-	0.93	0.88	1.00	7	293	0	0	0	0	1
RFA_00389	Hammerhead_3 links to Rfam database...	1.00	1.00	1.00	15	1416	2	0	0	2	0
RFA_00390	Hammerhead_3 links to Rfam database...	1.00	1.00	1.00	15	1416	2	0	0	2	0
RFA_00391	Hammerhead_3 links to Rfam database...	0.93	0.87	1.00	13	1418	2	0	0	2	2
RFA_00396	Hammerhead_3 links to Rfam database...	0.97	0.93	1.00	14	1417	2	0	0	2	1
RFA_00402	Hammerhead_3 links to Rfam database...	1.00	1.00	1.00	15	1416	0	0	0	0	0
RFA_00409	Hammerhead_3 links to Rfam database...	0.55	0.53	0.57	8	1417	7	1	5	1	7
RFA_00416	Hammerhead_3 links to Rfam database...	0.93	0.93	0.93	14	1470	4	0	1	3	1
RFA_00420	-	1.00	1.00	1.00	15	3306	13	0	0	13	0
RFA_00425	Hammerhead_3 links to Rfam database...	0.93	0.87	1.00	13	1640	4	0	0	4	2
RFA_00427	Hammerhead_3 links to Rfam database...	0.97	0.93	1.00	14	1471	2	0	0	2	1
RFA_00433	Hammerhead_3 links to Rfam database...	1.00	1.00	1.00	15	1416	2	0	0	2	0
RFA_00434	Hammerhead_3 links to Rfam database...	1.00	1.00	1.00	15	1416	2	0	0	2	0
RFA_00436	Hammerhead_3 links to Rfam database...	1.00	1.00	1.00	15	1416	2	0	0	2	0
RFA_00440	Hammerhead_3 links to Rfam database...	1.00	1.00	1.00	15	1470	2	0	0	2	0
RFA_00442	Hammerhead_3 links to Rfam database...	1.00	1.00	1.00	15	1416	2	0	0	2	0
RFA_00444	Hammerhead_3 links to Rfam database...	1.00	1.00	1.00	15	1525	1	0	0	1	0
RFA_00446	Hammerhead_3 links to Rfam database...	0.97	0.93	1.00	14	1471	2	0	0	2	1
RFA_00449	Hammerhead_3 links to Rfam database...	0.97	0.93	1.00	14	1471	2	0	0	2	1
RFA_00582	Y_RNA links to Rfam database...	1.00	1.00	1.00	15	5980	21	0	0	21	0
RFA_00583	Y_RNA links to Rfam database...	0.55	0.53	0.57	8	4936	20	0	6	14	7
RFA_00585	Y_RNA links to Rfam database...	1.00	1.00	1.00	15	4836	11	0	0	11	0
RFA_00587	Y_RNA links to Rfam database...	1.00	1.00	1.00	15	4836	12	0	0	12	0
RFA_00588	Y_RNA links to Rfam database...	0.93	0.87	1.00	13	4547	12	0	0	12	2
RFA_00589	Y_RNA links to Rfam database...	0.93	0.87	1.00	13	4358	12	0	0	12	2
RFA_00590	-	0.89	0.80	1.00	12	5344	13	0	0	13	3
RFA_00594	Y_RNA links to Rfam database...	0.97	0.93	1.00	14	2761	8	0	0	8	1
RFA_00596	Y_RNA links to Rfam database...	0.00	0.00	0.00	0	5982	22	4	9	9	15
RFA_00597	Telomerase-vert links to Rfam database...	0.50	0.50	0.50	55	97792	79	9	47	23	54
RFA_00599	Telomerase-vert links to Rfam database...	0.67	0.70	0.63	78	101352	64	17	28	19	33
RFA_00601	Telomerase-vert links to Rfam database...	0.47	0.49	0.44	56	99109	89	21	49	19	58
RFA_00602	Telomerase-vert links to Rfam database...	0.51	0.53	0.48	62	101347	86	18	48	20	54
RFA_00603	Telomerase-cil links to Rfam database...	0.69	0.74	0.63	26	13489	18	4	11	3	9
RFA_00604	Telomerase-cil links to Rfam database...	0.70	0.71	0.69	25	13494	22	2	9	11	10
RFA_00606	Telomerase-cil links to Rfam database...	0.67	0.67	0.68	26	21283	25	7	5	13	13
RFA_00607	Telomerase-cil links to Rfam database...	0.83	0.83	0.83	30	17730	18	4	2	12	6
RFA_00609	Telomerase-cil links to Rfam database...	0.75	0.76	0.74	28	17917	27	2	8	17	9
RFA_00610	Telomerase-cil links to Rfam database...	0.77	0.76	0.78	28	17169	23	2	6	15	9
RFA_00611	Telomerase-cil links to Rfam database...	0.84	0.83	0.85	29	13007	10	0	5	5	6
RFA_00613	Telomerase-cil links to Rfam database...	0.66	0.66	0.66	23	12845	15	4	8	3	12
RFA_00615	Telomerase-cil links to Rfam database...	0.65	0.69	0.62	24	13327	15	4	11	0	11
RFA_00620	Telomerase-cil links to Rfam database...	0.67	0.64	0.69	25	21909	24	3	8	13	14
RFA_00621	RNase_MRP links to Rfam database...	0.39	0.39	0.38	30	46281	63	9	40	14	46
RFA_00623	RNase_MRP links to Rfam database...	0.46	0.45	0.47	35	43881	54	7	33	14	43
RFA_00624	RNase_MRP links to Rfam database...	0.43	0.46	0.40	28	30065	47	6	36	5	33
RFA_00626	rne5 links to Rfam database...	0.87	0.84	0.91	73	56536	32	2	5	25	14
RFA_00627	rne5 links to Rfam database...	0.70	0.67	0.74	58	56875	36	4	16	16	29
RFA_00628	rne5 links to Rfam database...	0.86	0.83	0.89	71	57211	31	1	8	22	15
RFA_00630	rne5 links to Rfam database...	0.59	0.59	0.59	51	56866	48	8	28	12	36
RFA_00632	HDV_ribozyme links to Rfam database...	0.34	0.36	0.33	10	4065	20	2	18	0	18
RFA_00636	HDV_ribozyme links to Rfam database...	0.43	0.43	0.44	12	3978	15	2	13	0	16
RFA_00639	7SK links to Rfam database...	0.17	0.18	0.16	16	54518	83	18	63	2	71
RFA_00644	Vimentin3 links to Rfam database...	-0.01	0.00	0.00	0	2681	20	4	16	0	18
RFA_00645	Vimentin3 links to Rfam database...	-0.01	0.00	0.00	0	2402	13	2	11	0	18
RFA_00649	Vimentin3 links to Rfam database...	0.68	0.67	0.71	12	2128	7	1	4	2	6
RFA_00653	Vimentin3 links to Rfam database...	0.33	0.33	0.33	6	2127	12	3	9	0	12
RFA_00654	Vimentin3 links to Rfam database...	0.27	0.28	0.28	5	2397	13	2	11	0	13
RFA_00658	Hammerhead_1 links to Rfam database...	0.59	0.50	0.70	7	1118	5	0	3	2	7
RFA_00659	Hammerhead_1 links to Rfam database...	-0.01	0.00	0.00	0	1120	10	1	7	2	14
RFA_00664	Hammerhead_1 links to Rfam database...	-0.01	0.00	0.00	0	980	11	0	10	1	14
RFA_00667	Hammerhead_1 links to Rfam database...	0.30	0.29	0.33	4	978	8	1	7	0	10
RFA_00668	Hammerhead_1 links to Rfam database...	0.41	0.43	0.40	6	975	9	0	9	0	8
RFA_00672	Hammerhead_1 links to Rfam database...	-0.01	0.00	0.00	0	895	9	0	8	1	13
RFA_00673	Hammerhead_1 links to Rfam database...	0.42	0.36	0.50	5	1118	6	0	5	1	9
RFA_00674	Hammerhead_1 links to Rfam database...	0.71	0.71	0.71	10	1114	5	0	4	1	4
RFA_00675	Hammerhead_1 links to Rfam database...	0.29	0.29	0.31	4	977	9	1	8	0	10
RFA_00677	Hammerhead_1 links to Rfam database...	0.42	0.43	0.43	6	976	9	0	8	1	8
RFA_00678	Hammerhead_1 links to Rfam database...	0.43	0.29	0.67	4	940	2	0	2	0	10
RFA_00680	Hammerhead_1 links to Rfam database...	0.74	0.71	0.77	10	1115	6	0	3	3	4
RFA_00683	-	-0.01	0.00	0.00	0	1024	11	0	11	0	14
RFA_00684	Hammerhead_1 links to Rfam database...	0.66	0.64	0.69	9	977	5	0	4	1	5
RFA_00685	Hammerhead_1 links to Rfam database...	0.42	0.36	0.50	5	980	6	0	5	1	9
RFA_00695	Hammerhead_1 links to Rfam database...	0.56	0.50	0.64	7	7010	29	1	3	25	7
RFA_00703	Hammerhead_1 links to Rfam database...	0.67	0.64	0.69	9	4265	18	1	3	14	5
RFA_00704	Hammerhead_1 links to Rfam database...	0.32	0.21	0.50	3	984	4	0	3	1	11
RFA_00705	Hammerhead_1 links to Rfam database...	0.69	0.71	0.67	10	1020	5	0	5	0	4
RFA_00706	Hammerhead_1 links to Rfam database...	0.37	0.29	0.50	4	1027	4	0	4	0	10
RFA_00707	Hammerhead_1 links to Rfam database...	-0.01	0.00	0.00	0	1026	9	3	6	0	14
RFA_00708	Hammerhead_1 links to Rfam database...	0.40	0.29	0.57	4	1028	3	0	3	0	10
RFA_00709	Hammerhead_1 links to Rfam database...	-0.01	0.00	0.00	0	982	9	0	8	1	14
RFA_00710	Hammerhead_1 links to Rfam database...	-0.01	0.00	0.00	0	981	9	0	9	0	14
RFA_00711	Hammerhead_1 links to Rfam database...	0.33	0.29	0.40	4	1025	6	0	6	0	10
RFA_00716	Hammerhead_1 links to Rfam database...	-0.01	0.00	0.00	0	935	11	0	11	0	14
RFA_00717	Hammerhead_1 links to Rfam database...	0.64	0.64	0.64	9	889	5	0	5	0	5
RFA_00720	-	0.74	0.71	0.77	10	1163	3	0	3	0	4
RFA_00721	-	0.29	0.29	0.31	4	1163	9	0	9	0	10
RFA_00730	s2m links to Rfam database...	0.69	0.67	0.73	8	892	4	1	2	1	4
RFA_00731	s2m links to Rfam database...	0.69	0.67	0.73	8	892	4	1	2	1	4
RFA_00733	s2m links to Rfam database...	0.69	0.67	0.73	8	892	4	1	2	1	4
RFA_00734	s2m links to Rfam database...	0.64	0.67	0.62	8	890	5	1	4	0	4
RFA_00736	s2m links to Rfam database...	0.69	0.67	0.73	8	892	4	1	2	1	4
RFA_00737	s2m links to Rfam database...	1.00	1.00	1.00	12	891	1	0	0	1	0
RFA_00745	s2m links to Rfam database...	1.00	1.00	1.00	12	934	1	0	0	1	0
RFA_00749	s2m links to Rfam database...	0.69	0.67	0.73	8	892	4	1	2	1	4
RFA_00758	s2m links to Rfam database...	0.96	0.92	1.00	11	892	0	0	0	0	1
RFA_00762	s2m links to Rfam database...	0.64	0.67	0.62	8	890	5	1	4	0	4
RFA_00763	s2m links to Rfam database...	1.00	1.00	1.00	12	891	0	0	0	0	0
RFA_00764	s2m links to Rfam database...	0.69	0.67	0.73	8	892	4	1	2	1	4
RFA_00765	s2m links to Rfam database...	1.00	1.00	1.00	12	891	1	0	0	1	0
RFA_00767	Corona_pk3 links to Rfam database...	0.63	0.56	0.71	10	1877	4	0	4	0	8
RFA_00768	Corona_pk3 links to Rfam database...	0.48	0.44	0.53	8	1876	7	1	6	0	10
RFA_00769	Corona_pk3 links to Rfam database...	0.54	0.56	0.53	10	1934	9	4	5	0	8
RFA_00770	Corona_pk3 links to Rfam database...	0.61	0.56	0.67	10	2001	8	0	5	3	8
RFA_00773	Corona_pk3 links to Rfam database...	0.71	0.56	0.91	10	1942	4	1	0	3	8
RFA_00781	Gammaretro_CES links to Rfam database...	0.58	0.59	0.58	19	5017	14	2	12	0	13
RFA_00786	Gammaretro_CES links to Rfam database...	0.71	0.72	0.70	23	5017	10	2	8	0	9
RFA_00791	Gammaretro_CES links to Rfam database...	0.95	0.91	1.00	29	5122	1	0	0	1	3
RFA_00792	Gammaretro_CES links to Rfam database...	0.94	0.94	0.94	30	5018	4	0	2	2	2
RFA_00801	Gammaretro_CES links to Rfam database...	0.85	0.81	0.90	26	5021	4	0	3	1	6
RFA_00808	RydC links to Rfam database...	-0.01	0.00	0.00	0	2001	15	2	13	0	16
RFA_00809	RydC links to Rfam database...	0.37	0.38	0.38	6	2129	10	1	9	0	10
RFA_00814	R2_retro_el links to Rfam database...	0.77	0.78	0.76	32	25158	23	4	6	13	9
RFA_00815	R2_retro_el links to Rfam database...	0.56	0.61	0.51	25	24482	36	8	16	12	16
RFA_00816	R2_retro_el links to Rfam database...	0.60	0.66	0.55	27	23171	30	13	9	8	14
RFA_00818	R2_retro_el links to Rfam database...	0.19	0.22	0.17	9	20247	46	19	26	1	32
RFA_00819	R2_retro_el links to Rfam database...	0.96	0.95	0.98	39	27926	28	0	1	27	2
RFA_00820	bicoid_3 links to Rfam database...	0.89	0.90	0.88	144	151362	33	2	17	14	16
RFA_00830	bicoid_3 links to Rfam database...	0.48	0.45	0.52	70	152493	109	5	60	44	84
SPR_00030	-	0.49	0.43	0.56	9	2469	7	0	7	0	12
SPR_00032	tRNA links to Rfam database...	0.95	0.95	0.95	20	2535	3	0	1	2	1
SPR_00074	tRNA links to Rfam database...	0.55	0.55	0.55	11	2830	10	2	7	1	9
SPR_00079	tRNA links to Rfam database...	1.00	1.00	1.00	19	2466	1	0	0	1	0
SPR_00127	-	0.26	0.28	0.25	5	2395	17	1	14	2	13
SPR_00191	tRNA links to Rfam database...	0.18	0.19	0.19	4	2829	17	4	13	0	17
SPR_00220	tRNA links to Rfam database...	0.25	0.25	0.25	5	3721	19	4	11	4	15
SPR_00297	tRNA links to Rfam database...	0.60	0.57	0.63	12	2756	7	1	6	0	9
SPR_00298	tRNA links to Rfam database...	0.24	0.25	0.25	5	2755	15	0	15	0	15
SPR_00327	tRNA links to Rfam database...	0.50	0.52	0.48	11	2980	12	2	10	0	10
SPR_00331	tRNA links to Rfam database...	0.47	0.50	0.45	10	2753	12	4	8	0	10
SPR_00333	tRNA links to Rfam database...	0.46	0.48	0.45	10	2753	12	4	8	0	11
SPR_00365	-	0.60	0.59	0.62	13	2535	8	1	7	0	9
SPR_00366	-	0.56	0.50	0.63	10	2540	6	1	5	0	10
SPR_00367	-	0.78	0.73	0.84	16	2466	3	0	3	0	6
SPR_00416	tRNA links to Rfam database...	-0.01	0.00	0.00	0	3550	24	1	19	4	21
SPR_00461	tRNA links to Rfam database...	0.47	0.47	0.47	9	2537	11	1	9	1	10
SPR_00504	tRNA links to Rfam database...	1.00	1.00	1.00	20	2830	0	0	0	0	0
SPR_00505	tRNA links to Rfam database...	1.00	1.00	1.00	20	2906	0	0	0	0	0
SPR_00506	tRNA links to Rfam database...	1.00	1.00	1.00	20	2906	0	0	0	0	0
SPR_00509	tRNA links to Rfam database...	1.00	1.00	1.00	20	2906	0	0	0	0	0
SPR_00512	tRNA links to Rfam database...	1.00	1.00	1.00	20	2906	0	0	0	0	0
SPR_00513	tRNA links to Rfam database...	1.00	1.00	1.00	20	2906	0	0	0	0	0
SPR_00517	tRNA links to Rfam database...	0.41	0.45	0.38	9	2826	15	5	10	0	11
SPR_00518	tRNA links to Rfam database...	0.55	0.55	0.55	11	2906	9	1	8	0	9
SPR_00552	tRNA links to Rfam database...	0.27	0.26	0.29	5	2684	12	2	10	0	14
SPR_00557	tRNA links to Rfam database...	0.40	0.43	0.39	9	2827	14	1	13	0	12
SPR_00610	tRNA links to Rfam database...	0.31	0.33	0.29	7	2532	17	6	11	0	14
SPR_00632	tRNA links to Rfam database...	0.92	0.85	1.00	17	2539	0	0	0	0	3
SPR_00633	tRNA links to Rfam database...	0.32	0.35	0.30	7	2533	16	2	14	0	13
SPR_01051	tRNA links to Rfam database...	0.70	0.71	0.68	15	2534	7	1	6	0	6
SRP_00001	Bacteria_large_SRP links to Rfam database...	0.95	0.95	0.95	38	6746	2	1	1	0	2
SRP_00002	Metazoa_SRP links to Rfam database...	0.85	0.80	0.89	82	45058	11	4	6	1	20
SRP_00005	-	0.83	0.83	0.83	20	3981	6	0	4	2	4
SRP_00006	Metazoa_SRP links to Rfam database...	0.93	0.88	0.98	89	45662	9	0	2	7	12
SRP_00007	-	0.78	0.76	0.81	34	11893	12	1	7	4	11
SRP_00008	Bacteria_small_SRP links to Rfam database...	0.70	0.72	0.69	18	2900	9	0	8	1	7
SRP_00011	Plant_SRP links to Rfam database...	0.43	0.41	0.45	43	46265	52	4	48	0	61
SRP_00015	Plant_SRP links to Rfam database...	0.54	0.53	0.55	52	46266	47	8	34	5	47
SRP_00016	Archaea_SRP links to Rfam database...	0.91	0.87	0.94	95	47794	8	0	6	2	14
SRP_00018	Fungi_SRP links to Rfam database...	0.72	0.69	0.75	56	38428	30	1	18	11	25
SRP_00019	Fungi_SRP links to Rfam database...	0.90	0.88	0.92	80	35959	12	4	3	5	11
SRP_00023	-	0.00	0.00	0.00	0	20859	51	13	38	0	35
SRP_00024	Bacteria_large_SRP links to Rfam database...	0.76	0.77	0.75	67	37586	22	7	15	0	20
SRP_00026	Bacteria_large_SRP links to Rfam database...	0.69	0.69	0.69	61	36768	33	2	25	6	27
SRP_00027	Bacteria_large_SRP links to Rfam database...	0.70	0.67	0.73	58	37049	21	3	18	0	29
SRP_00030	Bacteria_large_SRP links to Rfam database...	0.77	0.77	0.76	68	36767	23	4	17	2	20
SRP_00031	Bacteria_large_SRP links to Rfam database...	0.70	0.69	0.71	61	36229	29	2	23	4	28
SRP_00037	Bacteria_large_SRP links to Rfam database...	0.62	0.60	0.65	52	36505	30	5	23	2	35
SRP_00038	Bacteria_small_SRP links to Rfam database...	0.94	0.94	0.94	31	5017	2	0	2	0	2
SRP_00040	Bacteria_small_SRP links to Rfam database...	0.70	0.74	0.66	23	5530	14	1	11	2	8
SRP_00042	Bacteria_small_SRP links to Rfam database...	0.45	0.48	0.43	12	3977	18	2	14	2	13
SRP_00043	Bacteria_small_SRP links to Rfam database...	0.45	0.48	0.42	14	5017	22	4	15	3	15
SRP_00044	Bacteria_small_SRP links to Rfam database...	0.77	0.75	0.80	24	6075	9	1	5	3	8
SRP_00051	Bacteria_small_SRP links to Rfam database...	0.97	0.97	0.97	29	5430	3	0	1	2	1
SRP_00054	Bacteria_small_SRP links to Rfam database...	0.45	0.44	0.47	14	5535	16	0	16	0	18
SRP_00060	Metazoa_SRP links to Rfam database...	0.95	0.93	0.98	93	44456	7	0	2	5	7
SRP_00061	Metazoa_SRP links to Rfam database...	0.95	0.93	0.97	93	44754	9	0	3	6	7
SRP_00069	Fungi_SRP links to Rfam database...	0.62	0.59	0.66	50	34377	29	2	24	3	35
SRP_00070	Fungi_SRP links to Rfam database...	0.29	0.33	0.26	40	126602	123	31	83	9	81
SRP_00072	Bacteria_small_SRP links to Rfam database...	1.00	1.00	1.00	29	6299	1	0	0	1	0
SRP_00073	Fungi_SRP links to Rfam database...	0.63	0.66	0.61	47	38983	44	7	23	14	24
SRP_00074	Bacteria_small_SRP links to Rfam database...	0.39	0.41	0.36	12	6522	25	3	18	4	17
SRP_00075	Bacteria_small_SRP links to Rfam database...	0.82	0.79	0.84	27	5533	8	0	5	3	7
SRP_00076	-	0.00	0.00	0.00	0	25356	82	17	52	13	39
SRP_00077	Bacteria_small_SRP links to Rfam database...	0.20	0.22	0.20	8	6629	33	3	30	0	29
SRP_00079	Plant_SRP links to Rfam database...	0.50	0.52	0.49	46	41811	53	7	41	5	42
SRP_00081	Bacteria_small_SRP links to Rfam database...	0.69	0.74	0.64	23	5529	13	1	12	0	8
SRP_00084	Bacteria_small_SRP links to Rfam database...	0.85	0.85	0.85	29	5426	5	1	4	0	5
SRP_00085	Plant_SRP links to Rfam database...	0.63	0.60	0.65	61	45357	35	6	27	2	40
SRP_00086	Metazoa_SRP links to Rfam database...	0.68	0.66	0.69	66	44158	30	3	26	1	34
SRP_00087	Fungi_SRP links to Rfam database...	0.31	0.36	0.27	21	37324	62	19	37	6	37
SRP_00088	Bacteria_large_SRP links to Rfam database...	0.68	0.69	0.67	61	34100	30	3	27	0	28
SRP_00089	Bacteria_large_SRP links to Rfam database...	0.83	0.81	0.86	73	35693	12	1	11	0	17
SRP_00090	Bacteria_large_SRP links to Rfam database...	0.32	0.31	0.33	28	35427	56	3	53	0	62
SRP_00091	Fungi_SRP links to Rfam database...	0.82	0.83	0.81	79	52878	23	4	14	5	16
SRP_00093	-	0.25	0.28	0.22	7	14164	42	11	14	17	18
SRP_00094	Bacteria_small_SRP links to Rfam database...	0.86	0.88	0.84	21	4070	4	0	4	0	3
SRP_00095	Bacteria_small_SRP links to Rfam database...	0.85	0.88	0.81	22	3978	5	1	4	0	3
SRP_00098	Bacteria_small_SRP links to Rfam database...	0.75	0.73	0.77	27	6406	9	1	7	1	10
SRP_00099	Plant_SRP links to Rfam database...	0.59	0.59	0.59	56	44755	41	7	32	2	39
SRP_00104	Fungi_SRP links to Rfam database...	0.48	0.52	0.44	36	34372	53	8	37	8	33
SRP_00105	Bacteria_small_SRP links to Rfam database...	0.38	0.38	0.39	13	5532	20	3	17	0	21
SRP_00106	Bacteria_large_SRP links to Rfam database...	0.67	0.76	0.59	19	5221	16	5	8	3	6
SRP_00107	Bacteria_small_SRP links to Rfam database...	0.13	0.16	0.11	3	3628	26	6	18	2	16
SRP_00108	-	0.61	0.66	0.57	46	38422	41	11	24	6	24
SRP_00117	Metazoa_SRP links to Rfam database...	0.80	0.76	0.84	78	45358	16	3	12	1	24
SRP_00118	-	0.81	0.79	0.83	75	39250	16	1	14	1	20
SRP_00119	-	0.84	0.82	0.86	42	12992	10	0	7	3	9
SRP_00120	-	0.89	0.86	0.93	74	37321	9	1	5	3	12
SRP_00124	Metazoa_SRP links to Rfam database...	0.54	0.52	0.56	44	37049	37	5	30	2	41
SRP_00127	Fungi_SRP links to Rfam database...	0.73	0.71	0.75	85	72277	34	7	21	6	34
SRP_00128	Bacteria_small_SRP links to Rfam database...	0.76	0.81	0.73	29	6746	11	1	10	0	7
SRP_00130	Archaea_SRP links to Rfam database...	0.27	0.27	0.27	26	49675	69	10	59	0	71
SRP_00135	-	0.98	0.96	1.00	49	14316	3	0	0	3	2
SRP_00136	Fungi_SRP links to Rfam database...	0.52	0.58	0.48	41	44167	55	16	29	10	30
SRP_00139	-	-0.01	0.00	0.00	0	2130	15	4	11	0	12
SRP_00141	Bacteria_small_SRP links to Rfam database...	0.91	0.90	0.93	37	6288	3	1	2	0	4
SRP_00142	Archaea_SRP links to Rfam database...	0.59	0.60	0.58	56	45960	42	5	35	2	37
SRP_00143	Archaea_SRP links to Rfam database...	0.85	0.84	0.86	85	49671	19	1	13	5	16
SRP_00144	Archaea_SRP links to Rfam database...	0.74	0.73	0.75	69	46573	30	1	22	7	25
SRP_00145	Bacteria_small_SRP links to Rfam database...	0.94	0.93	0.95	37	6289	2	1	1	0	3
SRP_00146	Bacteria_small_SRP links to Rfam database...	0.93	0.94	0.92	34	5216	3	1	2	0	2
SRP_00148	Fungi_SRP links to Rfam database...	0.33	0.36	0.32	31	49988	78	4	63	11	56
SRP_00152	Plant_SRP links to Rfam database...	0.65	0.63	0.67	65	45656	35	1	31	3	38
SRP_00157	Fungi_SRP links to Rfam database...	0.37	0.40	0.35	29	44169	62	15	40	7	43
SRP_00158	Fungi_SRP links to Rfam database...	0.32	0.37	0.27	42	124098	121	42	69	10	73
SRP_00160	Fungi_SRP links to Rfam database...	0.48	0.48	0.48	63	86190	69	9	58	2	67
SRP_00161	Bacteria_small_SRP links to Rfam database...	0.86	0.86	0.86	19	2828	3	0	3	0	3
SRP_00162	Bacteria_small_SRP links to Rfam database...	0.89	0.91	0.88	21	2902	4	0	3	1	2
SRP_00164	Bacteria_small_SRP links to Rfam database...	0.83	0.83	0.83	29	6868	6	1	5	0	6
SRP_00167	-	0.30	0.30	0.30	25	38698	63	6	52	5	59
SRP_00171	Metazoa_SRP links to Rfam database...	0.00	0.00	0.00	0	45355	96	16	80	0	88
SRP_00172	-	0.73	0.71	0.76	65	38974	27	0	21	6	26
SRP_00173	Bacteria_large_SRP links to Rfam database...	0.73	0.71	0.75	64	38141	27	1	20	6	26
SRP_00174	Bacteria_large_SRP links to Rfam database...	0.74	0.74	0.73	64	38693	28	7	17	4	22
SRP_00175	Fungi_SRP links to Rfam database...	0.65	0.65	0.65	55	44466	40	2	28	10	29
SRP_00178	Plant_SRP links to Rfam database...	0.81	0.75	0.87	76	45666	13	1	10	2	26
SRP_00180	-	0.64	0.65	0.64	35	22523	33	4	16	13	19
SRP_00181	Plant_SRP links to Rfam database...	0.31	0.29	0.34	30	45967	59	2	57	0	72
SRP_00182	Plant_SRP links to Rfam database...	0.70	0.68	0.73	69	45961	27	5	21	1	32
SRP_00184	Plant_SRP links to Rfam database...	0.58	0.54	0.64	54	45971	35	4	27	4	46
SRP_00193	-	0.67	0.67	0.69	24	6868	12	1	10	1	12
SRP_00197	Archaea_SRP links to Rfam database...	0.44	0.43	0.45	43	49360	53	4	48	1	58
SRP_00199	Archaea_SRP links to Rfam database...	0.65	0.65	0.66	68	50937	36	3	32	1	37
SRP_00200	Bacteria_small_SRP links to Rfam database...	0.80	0.81	0.81	29	6867	7	1	6	0	7
SRP_00201	Archaea_SRP links to Rfam database...	0.94	0.92	0.95	102	47788	7	0	5	2	9
SRP_00202	Archaea_SRP links to Rfam database...	0.97	0.95	0.98	111	54172	4	0	2	2	6
SRP_00203	Archaea_SRP links to Rfam database...	0.73	0.75	0.72	79	48718	37	3	28	6	26
SRP_00204	Archaea_SRP links to Rfam database...	0.60	0.61	0.60	62	49038	42	7	34	1	40
SRP_00206	Archaea_SRP links to Rfam database...	0.82	0.81	0.83	87	47790	19	5	13	1	21
SRP_00208	Archaea_SRP links to Rfam database...	0.85	0.81	0.88	82	46572	14	1	10	3	19
SRP_00209	Bacteria_small_SRP links to Rfam database...	0.80	0.81	0.79	22	4628	6	0	6	0	5
SRP_00214	-	0.90	0.92	0.88	22	3056	4	0	3	1	2
SRP_00216	Bacteria_small_SRP links to Rfam database...	0.93	0.93	0.93	25	3376	3	1	1	1	2
SRP_00221	-	0.77	0.81	0.74	17	3380	7	1	5	1	4
SRP_00222	Bacteria_small_SRP links to Rfam database...	0.94	0.96	0.92	24	3055	3	1	1	1	1
SRP_00227	Bacteria_small_SRP links to Rfam database...	0.95	0.97	0.94	30	5119	2	1	1	0	1
SRP_00230	Fungi_SRP links to Rfam database...	0.69	0.70	0.68	63	39529	32	2	27	3	27
SRP_00231	Bacteria_small_SRP links to Rfam database...	0.87	0.88	0.86	30	5425	5	1	4	0	4
SRP_00233	Bacteria_small_SRP links to Rfam database...	0.97	0.94	1.00	31	5120	0	0	0	0	2
SRP_00234	Bacteria_large_SRP links to Rfam database...	0.76	0.74	0.77	64	36232	25	1	18	6	22
SRP_00241	Plant_SRP links to Rfam database...	0.48	0.51	0.45	42	45963	53	14	37	2	40
SRP_00243	Bacteria_small_SRP links to Rfam database...	0.97	0.94	1.00	29	5122	1	0	0	1	2
SRP_00250	Bacteria_small_SRP links to Rfam database...	0.75	0.75	0.75	27	6750	11	1	8	2	9
SRP_00251	Bacteria_small_SRP links to Rfam database...	0.71	0.72	0.70	26	6984	11	1	10	0	10
SRP_00252	Metazoa_SRP links to Rfam database...	0.62	0.64	0.61	57	49047	38	12	25	1	32
SRP_00253	Metazoa_SRP links to Rfam database...	0.53	0.54	0.53	49	49362	49	7	37	5	41
SRP_00254	Fungi_SRP links to Rfam database...	0.49	0.54	0.45	33	32312	45	11	29	5	28
SRP_00257	Metazoa_SRP links to Rfam database...	0.86	0.87	0.85	94	50929	19	4	13	2	14
SRP_00261	-	0.76	0.74	0.78	77	45352	22	3	19	0	27
SRP_00263	-	0.71	0.70	0.72	73	48414	29	10	19	0	31
SRP_00265	Fungi_SRP links to Rfam database...	0.53	0.56	0.50	41	41246	53	10	31	12	32
SRP_00267	Metazoa_SRP links to Rfam database...	0.77	0.77	0.78	74	44456	27	3	18	6	22
SRP_00271	Bacteria_small_SRP links to Rfam database...	-0.01	0.00	0.00	0	3215	25	3	22	0	24
SRP_00273	Bacteria_small_SRP links to Rfam database...	0.79	0.80	0.78	32	6745	10	1	8	1	8
SRP_00274	Bacteria_small_SRP links to Rfam database...	0.83	0.84	0.82	32	6864	7	1	6	0	6
SRP_00276	Archaea_SRP links to Rfam database...	0.87	0.85	0.88	94	50614	14	5	8	1	16
SRP_00278	Archaea_SRP links to Rfam database...	0.77	0.76	0.78	80	45954	23	5	17	1	25
SRP_00282	Metazoa_SRP links to Rfam database...	0.32	0.37	0.28	23	43284	67	18	40	9	40
SRP_00286	Fungi_SRP links to Rfam database...	0.69	0.68	0.70	118	136858	59	3	47	9	56
SRP_00287	Fungi_SRP links to Rfam database...	0.68	0.67	0.69	109	141621	63	11	37	15	53
SRP_00290	Fungi_SRP links to Rfam database...	0.76	0.76	0.77	102	100443	43	3	28	12	33
SRP_00292	Fungi_SRP links to Rfam database...	0.65	0.62	0.69	108	137393	56	1	48	7	65
SRP_00294	Fungi_SRP links to Rfam database...	0.29	0.29	0.30	48	129128	113	11	99	3	119
SRP_00295	Bacteria_small_SRP links to Rfam database...	0.90	0.87	0.94	33	6868	3	1	1	1	5
SRP_00299	Metazoa_SRP links to Rfam database...	0.68	0.66	0.71	65	44162	27	2	24	1	34
SRP_00301	Fungi_SRP links to Rfam database...	0.84	0.81	0.88	70	32560	15	1	9	5	16
SRP_00302	Fungi_SRP links to Rfam database...	0.40	0.41	0.40	33	41533	60	5	45	10	48
SRP_00303	Bacteria_small_SRP links to Rfam database...	0.69	0.72	0.66	23	6635	12	1	11	0	9
SRP_00307	-	0.69	0.72	0.66	31	12833	19	4	12	3	12
SRP_00308	Bacteria_large_SRP links to Rfam database...	0.69	0.67	0.71	59	36232	28	4	20	4	29
SRP_00310	Bacteria_small_SRP links to Rfam database...	0.87	0.87	0.87	20	2903	4	0	3	1	3
SRP_00312	Bacteria_small_SRP links to Rfam database...	0.32	0.33	0.31	9	4157	20	3	17	0	18
SRP_00315	Bacteria_small_SRP links to Rfam database...	0.87	0.87	0.87	20	2903	3	0	3	0	3
SRP_00317	Metazoa_SRP links to Rfam database...	0.78	0.73	0.83	72	45063	22	0	15	7	26
SRP_00318	Bacteria_small_SRP links to Rfam database...	0.82	0.78	0.86	18	2982	3	0	3	0	5
SRP_00321	Archaea_SRP links to Rfam database...	0.64	0.64	0.65	69	47480	38	7	30	1	39
SRP_00322	Archaea_SRP links to Rfam database...	0.61	0.61	0.60	67	48405	45	6	38	1	42
SRP_00323	Archaea_SRP links to Rfam database...	0.93	0.92	0.94	98	47174	8	0	6	2	9
SRP_00324	Bacteria_small_SRP links to Rfam database...	0.57	0.62	0.53	18	5322	16	5	11	0	11
SRP_00325	Bacteria_small_SRP links to Rfam database...	0.97	0.94	1.00	31	4340	0	0	0	0	2
SRP_00330	Archaea_SRP links to Rfam database...	0.63	0.64	0.63	61	49989	40	4	32	4	34
SRP_00332	Archaea_SRP links to Rfam database...	0.84	0.85	0.83	90	50295	19	6	12	1	16
SRP_00335	Bacteria_large_SRP links to Rfam database...	0.32	0.44	0.24	17	35173	76	26	29	21	22
SRP_00336	-	0.23	0.23	0.23	18	38980	63	3	59	1	59
SRP_00337	Bacteria_large_SRP links to Rfam database...	0.66	0.63	0.69	57	35428	28	2	24	2	34
SRP_00338	Bacteria_small_SRP links to Rfam database...	0.97	0.97	0.97	35	5424	1	0	1	0	1
SRP_00339	Archaea_SRP links to Rfam database...	0.64	0.64	0.64	60	44457	37	6	28	3	34
SRP_00340	Metazoa_SRP links to Rfam database...	0.54	0.57	0.52	47	41237	46	8	36	2	35
SRP_00342	Bacteria_small_SRP links to Rfam database...	0.55	0.56	0.54	14	3979	17	1	11	5	11
SRP_00345	-	0.28	0.31	0.26	16	20644	52	12	34	6	36
SRP_00347	Metazoa_SRP links to Rfam database...	0.83	0.82	0.84	79	46571	20	5	10	5	17
SRP_00348	-	0.49	0.45	0.53	44	46888	39	5	34	0	54
SRP_00350	Bacteria_small_SRP links to Rfam database...	0.34	0.33	0.35	9	3890	17	2	15	0	18
SRP_00353	-	0.89	0.83	0.95	83	37863	5	0	4	1	17
SRP_00354	-	0.73	0.71	0.75	66	38693	25	0	22	3	27
SRP_00355	-	0.84	0.82	0.86	79	41813	18	2	11	5	17
SRP_00356	Bacteria_small_SRP links to Rfam database...	0.45	0.43	0.48	13	5023	14	4	10	0	17
SRP_00357	Bacteria_small_SRP links to Rfam database...	0.93	0.92	0.94	33	5321	2	1	1	0	3
SRP_00361	Plant_SRP links to Rfam database...	0.68	0.67	0.69	60	41818	37	5	22	10	30
SRP_00365	Bacteria_small_SRP links to Rfam database...	0.94	0.93	0.96	25	3377	1	0	1	0	2
SRP_00367	Bacteria_small_SRP links to Rfam database...	0.96	0.97	0.94	34	6750	2	1	1	0	1
SRP_00369	Bacteria_small_SRP links to Rfam database...	0.93	0.91	0.94	32	5744	2	1	1	0	3
SRP_00371	Fungi_SRP links to Rfam database...	0.77	0.77	0.78	63	36234	22	2	16	4	19
SRP_00382	Fungi_SRP links to Rfam database...	0.58	0.56	0.59	95	141618	77	6	59	12	75
SRP_00383	Bacteria_small_SRP links to Rfam database...	0.12	0.13	0.13	3	3217	20	3	17	0	21
TMR_00038	tmRNA links to Rfam database...	0.25	0.25	0.25	28	71142	87	12	71	4	82
TMR_00046	tmRNA links to Rfam database...	0.56	0.56	0.57	54	62740	47	7	34	6	42
TMR_00047	tmRNA links to Rfam database...	0.26	0.30	0.23	17	48442	73	16	41	16	40
TMR_00048	tmRNA links to Rfam database...	0.33	0.35	0.31	33	64874	78	9	64	5	62
TMR_00049	tmRNA links to Rfam database...	0.53	0.54	0.52	47	63099	56	9	35	12	40
TMR_00051	tmRNA links to Rfam database...	0.65	0.61	0.70	57	65621	44	2	23	19	37
TMR_00055	tmRNA links to Rfam database...	0.12	0.13	0.12	15	78874	114	25	89	0	99
TMR_00064	tmRNA links to Rfam database...	0.27	0.27	0.27	28	76923	77	20	57	0	75
TMR_00073	tmRNA links to Rfam database...	0.43	0.43	0.43	50	65588	65	5	60	0	67
TMR_00076	tmRNA links to Rfam database...	0.32	0.33	0.32	33	70772	77	14	57	6	67
TMR_00106	tmRNA links to Rfam database...	0.50	0.52	0.48	62	89970	72	16	52	4	58
TMR_00144	tmRNA links to Rfam database...	0.26	0.27	0.24	28	74189	90	15	73	2	75
TMR_00150	tmRNA links to Rfam database...	0.71	0.71	0.70	30	43028	52	3	10	39	12
TMR_00179	tmRNA links to Rfam database...	0.52	0.53	0.51	52	67060	60	10	39	11	46
TMR_00199	tmRNA links to Rfam database...	0.48	0.49	0.47	45	62739	58	21	30	7	47
TMR_00223	tmRNA links to Rfam database...	0.10	0.11	0.10	10	64165	90	15	71	4	85
TMR_00238	tmRNA links to Rfam database...	0.20	0.22	0.19	22	84551	99	23	70	6	79
TMR_00239	tmRNA links to Rfam database...	0.63	0.65	0.62	62	61676	40	7	31	2	34
TMR_00246	-	0.43	0.50	0.38	17	78165	113	6	22	85	17
TMR_00274	tmRNA links to Rfam database...	0.30	0.30	0.29	32	66684	84	13	66	5	73
TMR_00279	tmRNA links to Rfam database...	0.52	0.52	0.52	49	68912	55	7	38	10	45
TMR_00283	tmRNA links to Rfam database...	0.41	0.44	0.39	42	65234	68	19	46	3	54
TMR_00310	tmRNA links to Rfam database...	0.60	0.58	0.63	57	63812	38	9	25	4	41
TMR_00317	tmRNA links to Rfam database...	0.60	0.62	0.58	63	68156	49	14	32	3	39
TMR_00352	tmRNA links to Rfam database...	0.39	0.41	0.36	31	95181	92	18	36	38	44
TMR_00409	tmRNA links to Rfam database...	0.69	0.74	0.64	34	68582	73	7	12	54	12
TMR_00411	tmRNA links to Rfam database...	0.51	0.52	0.50	45	60985	50	12	33	5	42
TMR_00415	tmRNA links to Rfam database...	0.35	0.35	0.35	35	67062	67	13	51	3	66
TMR_00419	tmRNA links to Rfam database...	0.33	0.32	0.35	35	81709	84	9	57	18	76
TMR_00422	tmRNA links to Rfam database...	0.52	0.52	0.52	48	67803	54	10	35	9	44
TMR_00458	tmRNA links to Rfam database...	0.15	0.15	0.15	14	63450	89	19	63	7	79
TMR_00478	tmRNA links to Rfam database...	0.44	0.45	0.42	45	71904	67	15	46	6	54
TMR_00553	tmRNA links to Rfam database...	0.44	0.43	0.44	35	48126	50	4	40	6	46
TMR_00560	tmRNA links to Rfam database...	0.40	0.40	0.40	39	60978	67	6	52	9	59
TMR_00568	tmRNA links to Rfam database...	0.35	0.34	0.37	34	60633	65	9	50	6	65
TMR_00579	tmRNA links to Rfam database...	0.23	0.26	0.21	23	80489	98	19	70	9	67
TMR_00581	tmRNA links to Rfam database...	0.14	0.14	0.13	14	62374	100	11	82	7	84
TMR_00587	tmRNA links to Rfam database...	0.72	0.70	0.74	70	61330	30	4	21	5	30
TMR_00588	tmRNA links to Rfam database...	0.21	0.22	0.20	22	77312	96	20	67	9	79
TMR_00594	tmRNA links to Rfam database...	0.21	0.22	0.21	23	79291	91	20	67	4	81
TMR_00596	tmRNA links to Rfam database...	0.16	0.17	0.15	16	78106	98	15	73	10	79
TMR_00600	tmRNA links to Rfam database...	0.18	0.18	0.19	21	79687	94	18	74	2	94
TMR_00603	tmRNA links to Rfam database...	0.55	0.56	0.55	24	60334	76	7	13	56	19
TMR_00606	tmRNA links to Rfam database...	0.38	0.38	0.38	41	68897	73	7	61	5	66
TMR_00625	tmRNA links to Rfam database...	0.22	0.23	0.21	24	78890	93	28	61	4	82
TMR_00706	tmRNA links to Rfam database...	0.53	0.52	0.53	54	66328	52	6	42	4	49
TMR_00712	tmRNA links to Rfam database...	0.38	0.39	0.38	43	78492	73	22	49	2	66

^top

Performance of Afold - scored lower in this pairwise comparison

1. Total counts & total scores for Afold

Total Base Pair Counts
Total TP	67132
Total TN	359948641
Total FP	109497
Total FP CONTRA	14419
Total FP INCONS	73014
Total FP COMP	22064
Total FN	87783

Total Scores
MCC	0.434
Average MCC ± 95% Confidence Intervals	0.524 ± 0.015
Sensitivity	0.433
Positive Predictive Value	0.434
Nr of predictions	1275

^top

2. Individual counts for Afold [ download as .csv ]

RNA Chain	Rfam family	MCC	SENS	PPV	TP	TN	FP	FP CONTRA	FP INCONS	FP COMP	FN
ASE_00001	RNaseP_arch links to Rfam database...	0.75	0.72	0.78	54	34122	23	3	12	8	21
ASE_00002	RNaseP_arch links to Rfam database...	0.62	0.62	0.63	45	35439	33	4	23	6	28
ASE_00004	RNaseP_bact_a links to Rfam database...	0.51	0.52	0.51	50	47797	49	10	38	1	47
ASE_00005	RNaseP_bact_a links to Rfam database...	0.61	0.56	0.66	66	57870	39	0	34	5	51
ASE_00006	RNaseP_bact_a links to Rfam database...	0.66	0.67	0.65	62	47491	36	7	26	3	31
ASE_00007	RNaseP_bact_a links to Rfam database...	0.56	0.53	0.59	58	59586	45	1	40	4	52
ASE_00009	RNaseP_arch links to Rfam database...	0.79	0.76	0.82	51	26044	13	0	11	2	16
ASE_00012	RNaseP_bact_a links to Rfam database...	0.41	0.39	0.43	48	73808	72	1	63	8	75
ASE_00014	RNaseP_arch links to Rfam database...	0.24	0.25	0.24	26	54178	82	8	73	1	80
ASE_00016	-	0.60	0.62	0.58	38	66001	93	3	24	66	23
ASE_00017	RNaseP_nuc links to Rfam database...	0.26	0.28	0.24	18	50965	74	6	51	17	46
ASE_00020	RNaseP_bact_a links to Rfam database...	0.57	0.54	0.60	68	73807	46	6	39	1	58
ASE_00021	RNaseP_bact_a links to Rfam database...	0.54	0.51	0.59	81	104058	66	7	50	9	79
ASE_00023	RNaseP_bact_a links to Rfam database...	0.66	0.64	0.69	81	84137	42	3	34	5	46
ASE_00024	-	0.74	0.70	0.78	49	29340	27	0	14	13	21
ASE_00028	RNaseP_bact_b links to Rfam database...	0.58	0.56	0.61	70	84551	54	4	41	9	56
ASE_00029	RNaseP_bact_a links to Rfam database...	0.55	0.53	0.56	65	82912	55	5	46	4	57
ASE_00030	RNaseP_bact_a links to Rfam database...	0.61	0.59	0.63	85	85357	50	5	44	1	60
ASE_00032	RNaseP_bact_a links to Rfam database...	0.55	0.53	0.58	62	80094	50	6	38	6	56
ASE_00033	RNaseP_bact_a links to Rfam database...	0.33	0.31	0.36	38	64874	70	4	64	2	83
ASE_00036	RNaseP_bact_a links to Rfam database...	0.41	0.39	0.43	52	75735	71	8	60	3	80
ASE_00037	RNaseP_bact_a links to Rfam database...	0.34	0.32	0.37	35	59245	63	0	60	3	75
ASE_00038	RNaseP_bact_a links to Rfam database...	0.53	0.52	0.54	53	53529	48	4	42	2	48
ASE_00040	RNaseP_bact_a links to Rfam database...	0.50	0.47	0.53	63	78883	63	5	52	6	70
ASE_00041	RNaseP_bact_a links to Rfam database...	0.53	0.51	0.55	55	57530	51	2	43	6	53
ASE_00042	RNaseP_bact_a links to Rfam database...	0.44	0.42	0.47	61	89969	73	3	67	3	84
ASE_00044	RNaseP_bact_a links to Rfam database...	0.74	0.70	0.78	74	54520	26	3	18	5	31
ASE_00045	RNaseP_bact_b links to Rfam database...	0.65	0.65	0.65	52	47198	37	7	21	9	28
ASE_00046	RNaseP_bact_a links to Rfam database...	0.59	0.55	0.63	57	50313	33	2	31	0	46
ASE_00047	RNaseP_bact_a links to Rfam database...	0.40	0.38	0.43	50	74188	68	4	63	1	80
ASE_00053	RNaseP_bact_a links to Rfam database...	0.54	0.52	0.56	69	79278	61	12	42	7	64
ASE_00056	-	0.34	0.35	0.34	25	30803	52	4	44	4	47
ASE_00064	RNaseP_bact_a links to Rfam database...	0.43	0.43	0.44	38	45364	54	5	44	5	51
ASE_00066	RNaseP_bact_a links to Rfam database...	0.57	0.55	0.59	71	72269	52	4	46	2	59
ASE_00068	RNaseP_bact_a links to Rfam database...	0.33	0.32	0.36	27	37599	50	2	47	1	58
ASE_00074	RNaseP_bact_a links to Rfam database...	0.48	0.47	0.50	56	67784	57	7	49	1	63
ASE_00075	RNaseP_bact_a links to Rfam database...	0.65	0.59	0.72	95	108679	46	3	34	9	67
ASE_00076	RNaseP_bact_a links to Rfam database...	0.57	0.54	0.61	64	68160	42	7	34	1	54
ASE_00077	RNaseP_bact_a links to Rfam database...	0.52	0.51	0.54	44	45068	39	6	32	1	42
ASE_00078	RNaseP_bact_a links to Rfam database...	0.67	0.67	0.67	56	42988	32	5	22	5	27
ASE_00079	RNaseP_bact_a links to Rfam database...	0.50	0.48	0.52	48	55519	45	2	42	1	52
ASE_00080	RNaseP_bact_a links to Rfam database...	0.50	0.48	0.52	59	71518	59	3	51	5	64
ASE_00081	RNaseP_bact_a links to Rfam database...	0.46	0.45	0.46	44	49675	53	5	46	2	53
ASE_00082	RNaseP_bact_a links to Rfam database...	0.57	0.54	0.61	63	70396	51	1	40	10	53
ASE_00083	RNaseP_bact_a links to Rfam database...	0.71	0.67	0.76	74	62383	32	1	23	8	36
ASE_00084	RNaseP_bact_a links to Rfam database...	0.72	0.71	0.73	70	53532	30	6	20	4	29
ASE_00087	RNaseP_bact_a links to Rfam database...	0.56	0.51	0.61	74	88288	54	5	43	6	70
ASE_00089	-	0.39	0.37	0.41	29	31305	45	0	41	4	50
ASE_00090	RNaseP_bact_a links to Rfam database...	0.46	0.47	0.47	47	55510	59	6	48	5	54
ASE_00092	RNaseP_bact_a links to Rfam database...	0.68	0.65	0.72	73	63444	35	3	26	6	40
ASE_00096	RNaseP_bact_a links to Rfam database...	0.51	0.50	0.53	57	63439	51	2	48	1	58
ASE_00104	RNaseP_bact_a links to Rfam database...	0.53	0.50	0.56	60	64153	49	8	40	1	59
ASE_00111	RNaseP_nuc links to Rfam database...	0.15	0.19	0.12	11	49992	89	31	52	6	46
ASE_00112	RNaseP_bact_a links to Rfam database...	0.77	0.72	0.82	84	75364	25	5	13	7	32
ASE_00114	RNaseP_bact_b links to Rfam database...	0.40	0.40	0.39	31	45372	58	6	42	10	46
ASE_00115	RNaseP_bact_a links to Rfam database...	0.55	0.54	0.56	55	54517	51	1	42	8	46
ASE_00116	RNaseP_arch links to Rfam database...	0.24	0.24	0.23	16	31557	54	8	45	1	50
ASE_00118	RNaseP_bact_a links to Rfam database...	0.38	0.38	0.39	39	60625	64	5	57	2	63
ASE_00119	RNaseP_bact_a links to Rfam database...	0.63	0.60	0.67	65	62738	35	1	31	3	43
ASE_00120	RNaseP_arch links to Rfam database...	0.37	0.35	0.38	33	46885	53	9	44	0	61
ASE_00121	RNaseP_arch links to Rfam database...	0.29	0.29	0.29	27	45058	65	8	57	0	65
ASE_00122	RNaseP_bact_a links to Rfam database...	0.28	0.27	0.29	24	43283	60	4	54	2	64
ASE_00123	RNaseP_bact_a links to Rfam database...	0.44	0.42	0.46	36	38425	48	3	39	6	49
ASE_00125	RNaseP_bact_a links to Rfam database...	0.64	0.63	0.65	55	39255	32	4	26	2	33
ASE_00126	RNaseP_bact_a links to Rfam database...	0.74	0.74	0.73	61	40387	27	3	19	5	21
ASE_00128	RNaseP_bact_a links to Rfam database...	0.74	0.72	0.77	72	53207	30	2	20	8	28
ASE_00129	RNaseP_bact_a links to Rfam database...	0.77	0.74	0.80	82	62732	26	3	18	5	29
ASE_00131	RNaseP_bact_a links to Rfam database...	0.62	0.55	0.70	47	39273	31	0	20	11	38
ASE_00132	RNaseP_bact_a links to Rfam database...	0.63	0.61	0.65	58	50314	34	7	24	3	37
ASE_00134	RNaseP_bact_a links to Rfam database...	0.43	0.42	0.44	40	50313	54	7	43	4	55
ASE_00135	RNaseP_bact_a links to Rfam database...	0.45	0.44	0.45	48	63084	63	8	50	5	61
ASE_00136	RNaseP_bact_a links to Rfam database...	0.69	0.65	0.72	60	48122	28	3	20	5	32
ASE_00137	RNaseP_bact_a links to Rfam database...	0.44	0.43	0.45	42	48423	53	4	47	2	56
ASE_00138	RNaseP_bact_a links to Rfam database...	0.51	0.49	0.53	40	40395	36	4	31	1	41
ASE_00139	RNaseP_bact_a links to Rfam database...	0.83	0.77	0.89	80	54195	16	2	8	6	24
ASE_00140	RNaseP_bact_a links to Rfam database...	0.62	0.57	0.67	71	70770	38	6	29	3	54
ASE_00144	-	0.37	0.38	0.37	37	58211	64	12	51	1	60
ASE_00145	RNaseP_arch links to Rfam database...	0.40	0.40	0.40	44	70016	69	9	56	4	67
ASE_00146	RNaseP_bact_a links to Rfam database...	0.55	0.52	0.59	64	70768	50	2	42	6	60
ASE_00148	RNaseP_arch links to Rfam database...	0.63	0.60	0.65	93	112433	53	4	45	4	61
ASE_00151	RNaseP_bact_a links to Rfam database...	0.26	0.26	0.27	25	51912	66	9	57	0	73
ASE_00153	RNaseP_nuc links to Rfam database...	0.66	0.67	0.65	49	57555	68	2	24	42	24
ASE_00154	RNaseP_arch links to Rfam database...	0.57	0.55	0.58	59	65240	45	4	38	3	48
ASE_00155	RNaseP_arch links to Rfam database...	0.50	0.48	0.52	68	93396	69	10	54	5	74
ASE_00159	-	0.63	0.59	0.68	36	34927	46	0	17	29	25
ASE_00160	-	0.86	0.86	0.86	43	23821	31	0	7	24	7
ASE_00161	RNaseP_bact_b links to Rfam database...	0.27	0.29	0.26	25	53531	73	15	57	1	62
ASE_00163	RNaseP_bact_a links to Rfam database...	0.64	0.63	0.66	59	53211	43	4	27	12	34
ASE_00165	RNaseP_bact_a links to Rfam database...	0.64	0.60	0.67	61	52884	31	5	25	1	40
ASE_00168	RNaseP_nuc links to Rfam database...	0.31	0.38	0.25	24	60631	88	24	47	17	40
ASE_00169	RNaseP_bact_a links to Rfam database...	0.49	0.48	0.52	51	57192	52	6	42	4	56
ASE_00170	RNaseP_bact_a links to Rfam database...	0.70	0.68	0.72	63	48740	27	2	23	2	30
ASE_00171	RNaseP_bact_a links to Rfam database...	0.70	0.69	0.71	65	48425	28	5	21	2	29
ASE_00172	RNaseP_bact_a links to Rfam database...	0.62	0.61	0.63	65	58893	41	8	30	3	41
ASE_00174	RNaseP_bact_a links to Rfam database...	0.59	0.57	0.62	62	60975	42	6	32	4	47
ASE_00175	RNaseP_bact_a links to Rfam database...	0.59	0.59	0.59	63	59925	45	7	36	2	44
ASE_00176	RNaseP_bact_a links to Rfam database...	0.60	0.55	0.64	61	59936	38	5	29	4	49
ASE_00179	RNaseP_bact_a links to Rfam database...	0.64	0.65	0.62	55	44164	35	7	27	1	29
ASE_00180	RNaseP_bact_a links to Rfam database...	0.71	0.69	0.74	69	51267	31	2	22	7	31
ASE_00181	RNaseP_bact_a links to Rfam database...	0.54	0.53	0.55	56	57528	52	3	43	6	50
ASE_00182	RNaseP_bact_a links to Rfam database...	0.60	0.58	0.62	79	84128	49	6	42	1	57
ASE_00183	RNaseP_bact_a links to Rfam database...	0.71	0.70	0.72	79	61316	35	2	28	5	34
ASE_00185	RNaseP_bact_a links to Rfam database...	0.72	0.70	0.74	89	73416	38	6	25	7	39
ASE_00186	RNaseP_bact_a links to Rfam database...	0.73	0.69	0.78	91	78887	30	3	22	5	41
ASE_00187	RNaseP_arch links to Rfam database...	0.50	0.48	0.51	55	68528	58	7	45	6	60
ASE_00190	RNaseP_bact_b links to Rfam database...	0.49	0.46	0.52	41	45372	44	7	31	6	49
ASE_00191	RNaseP_arch links to Rfam database...	0.56	0.52	0.59	32	29592	32	1	21	10	29
ASE_00192	RNaseP_bact_b links to Rfam database...	0.40	0.38	0.42	50	84547	75	6	63	6	83
ASE_00196	RNaseP_arch links to Rfam database...	0.76	0.75	0.77	56	31553	21	2	15	4	19
ASE_00197	RNaseP_bact_a links to Rfam database...	0.49	0.46	0.52	67	89123	66	4	59	3	78
ASE_00198	RNaseP_bact_a links to Rfam database...	0.61	0.59	0.64	60	52556	40	6	28	6	42
ASE_00203	RNaseP_bact_a links to Rfam database...	0.70	0.69	0.72	66	46573	26	7	19	0	30
ASE_00209	RNaseP_arch links to Rfam database...	0.29	0.28	0.30	25	42989	57	4	53	0	63
ASE_00210	RNaseP_arch links to Rfam database...	0.61	0.62	0.60	40	27194	28	6	21	1	25
ASE_00212	RNaseP_bact_a links to Rfam database...	0.70	0.67	0.74	99	93827	39	3	32	4	49
ASE_00213	RNaseP_arch links to Rfam database...	0.72	0.71	0.73	47	27197	18	3	14	1	19
ASE_00214	RNaseP_bact_a links to Rfam database...	0.72	0.72	0.73	74	56178	36	4	24	8	29
ASE_00215	RNaseP_bact_a links to Rfam database...	0.54	0.51	0.57	50	48429	39	4	33	2	49
ASE_00216	RNaseP_bact_a links to Rfam database...	0.67	0.68	0.66	56	39255	31	9	20	2	26
ASE_00217	RNaseP_bact_a links to Rfam database...	0.40	0.37	0.45	33	40396	48	3	38	7	57
ASE_00221	RNaseP_bact_a links to Rfam database...	0.49	0.45	0.54	53	64522	48	3	42	3	64
ASE_00222	RNaseP_arch links to Rfam database...	0.56	0.55	0.56	87	111947	68	8	59	1	70
ASE_00227	RNaseP_bact_a links to Rfam database...	0.25	0.23	0.27	31	78888	84	6	78	0	102
ASE_00228	RNaseP_bact_a links to Rfam database...	0.52	0.53	0.50	46	46879	46	14	32	0	40
ASE_00229	RNaseP_bact_a links to Rfam database...	0.61	0.61	0.62	53	42400	33	8	25	0	34
ASE_00231	RNaseP_bact_a links to Rfam database...	0.65	0.65	0.65	62	47800	33	5	28	0	34
ASE_00232	RNaseP_bact_a links to Rfam database...	0.63	0.64	0.61	54	38415	37	10	24	3	30
ASE_00234	RNaseP_bact_a links to Rfam database...	0.58	0.53	0.62	69	75355	47	3	39	5	60
ASE_00237	RNaseP_nuc links to Rfam database...	0.00	0.00	0.00	0	45676	92	25	52	15	56
ASE_00238	RNaseP_bact_a links to Rfam database...	0.59	0.59	0.60	67	64150	50	2	42	6	47
ASE_00240	RNaseP_bact_a links to Rfam database...	0.58	0.56	0.60	52	46578	44	4	31	9	41
ASE_00241	RNaseP_bact_a links to Rfam database...	0.49	0.49	0.49	43	43868	47	7	38	2	44
ASE_00245	RNaseP_nuc links to Rfam database...	0.89	0.86	0.93	67	55206	39	0	5	34	11
ASE_00246	RNaseP_nuc links to Rfam database...	0.30	0.33	0.27	22	48123	71	17	43	11	45
ASE_00247	RNaseP_nuc links to Rfam database...	0.18	0.19	0.17	12	54213	88	15	45	28	52
ASE_00252	RNaseP_bact_a links to Rfam database...	0.54	0.52	0.56	88	115284	71	5	63	3	80
ASE_00254	RNaseP_bact_a links to Rfam database...	0.49	0.46	0.52	38	36783	39	4	31	4	44
ASE_00255	RNaseP_bact_a links to Rfam database...	0.64	0.62	0.66	80	74570	45	7	34	4	50
ASE_00257	RNaseP_bact_a links to Rfam database...	0.55	0.55	0.55	53	50944	47	4	39	4	44
ASE_00258	RNaseP_nuc links to Rfam database...	0.74	0.72	0.76	39	26745	26	0	12	14	15
ASE_00263	RNaseP_bact_a links to Rfam database...	0.62	0.63	0.62	76	70377	49	5	42	2	44
ASE_00264	RNaseP_nuc links to Rfam database...	0.84	0.79	0.90	79	49053	24	0	9	15	21
ASE_00267	RNaseP_bact_a links to Rfam database...	0.32	0.31	0.34	27	45070	62	5	48	9	61
ASE_00270	RNaseP_bact_a links to Rfam database...	0.76	0.73	0.80	94	72272	29	4	20	5	34
ASE_00274	RNaseP_bact_a links to Rfam database...	0.45	0.44	0.46	45	55513	54	10	43	1	58
ASE_00277	RNaseP_bact_a links to Rfam database...	0.38	0.38	0.38	35	48112	61	9	49	3	56
ASE_00279	RNaseP_bact_a links to Rfam database...	0.68	0.66	0.71	67	53206	35	3	25	7	34
ASE_00280	RNaseP_bact_a links to Rfam database...	0.36	0.36	0.37	35	51909	65	4	55	6	63
ASE_00282	RNaseP_bact_a links to Rfam database...	0.56	0.55	0.57	70	77693	58	5	47	6	57
ASE_00283	RNaseP_bact_a links to Rfam database...	0.75	0.73	0.77	78	61675	30	3	20	7	29
ASE_00284	RNaseP_bact_a links to Rfam database...	0.62	0.60	0.64	65	58210	44	4	32	8	43
ASE_00285	RNaseP_bact_a links to Rfam database...	0.75	0.70	0.80	86	68899	28	3	18	7	36
ASE_00286	RNaseP_bact_a links to Rfam database...	0.43	0.42	0.43	39	46574	63	5	47	11	53
ASE_00287	RNaseP_bact_a links to Rfam database...	0.59	0.55	0.63	57	54856	39	2	31	6	46
ASE_00288	RNaseP_bact_a links to Rfam database...	0.47	0.45	0.48	42	45969	48	6	39	3	51
ASE_00289	RNaseP_bact_a links to Rfam database...	0.66	0.62	0.70	97	100886	45	4	38	3	60
ASE_00291	-	0.38	0.36	0.40	34	48430	53	9	43	1	60
ASE_00292	RNaseP_bact_a links to Rfam database...	0.62	0.58	0.66	80	81689	43	2	39	2	58
ASE_00294	RNaseP_bact_a links to Rfam database...	0.74	0.68	0.80	117	114335	32	2	27	3	54
ASE_00295	RNaseP_bact_a links to Rfam database...	0.63	0.60	0.66	79	73801	42	8	32	2	52
ASE_00296	RNaseP_bact_a links to Rfam database...	0.25	0.24	0.27	35	91676	98	8	87	3	110
ASE_00297	RNaseP_bact_a links to Rfam database...	0.50	0.50	0.51	49	52878	53	4	44	5	49
ASE_00298	RNaseP_bact_a links to Rfam database...	0.28	0.27	0.29	31	67420	79	9	68	2	82
ASE_00299	RNaseP_bact_a links to Rfam database...	0.49	0.48	0.51	48	49361	54	5	41	8	52
ASE_00303	RNaseP_nuc links to Rfam database...	0.54	0.58	0.50	55	67787	68	14	40	14	40
ASE_00305	RNaseP_bact_b links to Rfam database...	0.47	0.47	0.47	40	54529	56	10	36	10	45
ASE_00313	RNaseP_nuc links to Rfam database...	0.72	0.71	0.74	63	62396	45	4	18	23	26
ASE_00321	RNaseP_bact_b links to Rfam database...	0.40	0.40	0.41	35	54530	57	7	43	7	53
ASE_00322	-	0.75	0.81	0.70	39	29347	42	3	14	25	9
ASE_00328	RNaseP_bact_b links to Rfam database...	0.40	0.41	0.40	46	72656	75	3	66	6	66
ASE_00330	RNaseP_nuc links to Rfam database...	0.72	0.71	0.74	64	56193	44	3	20	21	26
ASE_00332	RNaseP_bact_a links to Rfam database...	0.56	0.54	0.59	75	81682	55	2	51	2	63
ASE_00337	RNaseP_nuc links to Rfam database...	0.52	0.54	0.51	38	39265	50	6	31	13	33
ASE_00338	RNaseP_nuc links to Rfam database...	0.67	0.63	0.72	62	66344	41	4	20	17	36
ASE_00340	RNaseP_bact_a links to Rfam database...	0.76	0.73	0.78	62	45977	26	6	11	9	23
ASE_00342	RNaseP_bact_a links to Rfam database...	0.57	0.54	0.60	62	62378	41	5	36	0	53
ASE_00343	RNaseP_bact_a links to Rfam database...	0.34	0.35	0.34	39	83321	88	9	67	12	74
ASE_00344	-	0.95	0.93	0.96	52	27207	21	0	2	19	4
ASE_00346	RNaseP_arch links to Rfam database...	0.31	0.30	0.32	29	48114	65	7	55	3	68
ASE_00350	-	0.87	0.85	0.90	44	29597	31	0	5	26	8
ASE_00359	RNaseP_arch links to Rfam database...	0.49	0.49	0.49	39	42698	49	3	38	8	41
ASE_00361	RNaseP_bact_a links to Rfam database...	0.51	0.49	0.53	62	75349	59	7	48	4	65
ASE_00362	RNaseP_bact_a links to Rfam database...	0.61	0.60	0.61	55	48115	39	6	29	4	36
ASE_00363	RNaseP_bact_a links to Rfam database...	0.53	0.54	0.53	51	51263	47	5	41	1	43
ASE_00364	RNaseP_bact_a links to Rfam database...	0.42	0.42	0.43	44	54182	63	4	55	4	61
ASE_00366	RNaseP_bact_a links to Rfam database...	0.54	0.56	0.53	55	58549	52	10	39	3	43
ASE_00367	RNaseP_bact_a links to Rfam database...	0.28	0.29	0.27	25	42979	68	8	59	1	61
ASE_00369	RNaseP_bact_a links to Rfam database...	0.56	0.55	0.58	59	55843	44	4	39	1	48
ASE_00370	RNaseP_bact_a links to Rfam database...	0.63	0.63	0.62	53	41820	33	7	25	1	31
ASE_00372	RNaseP_bact_a links to Rfam database...	0.63	0.62	0.65	62	51907	39	6	28	5	38
ASE_00374	RNaseP_bact_a links to Rfam database...	0.53	0.52	0.54	46	44765	40	8	31	1	42
ASE_00375	RNaseP_bact_a links to Rfam database...	0.70	0.66	0.74	73	60280	31	1	24	6	37
ASE_00376	RNaseP_bact_a links to Rfam database...	0.48	0.46	0.50	48	56857	52	4	44	4	57
ASE_00379	RNaseP_bact_a links to Rfam database...	0.57	0.55	0.60	49	45974	41	3	30	8	40
ASE_00380	RNaseP_bact_a links to Rfam database...	0.57	0.55	0.59	54	54854	41	2	36	3	45
ASE_00382	RNaseP_bact_a links to Rfam database...	0.49	0.49	0.50	41	41823	45	6	35	4	43
ASE_00383	RNaseP_bact_a links to Rfam database...	0.58	0.55	0.62	58	54521	40	3	33	4	47
ASE_00384	RNaseP_bact_a links to Rfam database...	0.41	0.39	0.43	36	48432	58	2	46	10	56
ASE_00385	RNaseP_bact_a links to Rfam database...	0.42	0.43	0.41	35	41819	53	6	45	2	46
ASE_00386	RNaseP_bact_a links to Rfam database...	0.65	0.65	0.65	62	50307	41	3	31	7	34
ASE_00387	RNaseP_bact_a links to Rfam database...	0.43	0.43	0.43	45	55841	59	6	53	0	59
ASE_00388	RNaseP_bact_a links to Rfam database...	0.43	0.42	0.44	37	45669	53	3	44	6	52
ASE_00390	RNaseP_bact_a links to Rfam database...	0.44	0.42	0.47	36	42118	52	6	35	11	49
ASE_00393	RNaseP_bact_a links to Rfam database...	0.37	0.35	0.39	33	47811	58	2	49	7	60
ASE_00394	RNaseP_bact_a links to Rfam database...	0.69	0.68	0.70	63	46881	29	5	22	2	30
ASE_00395	RNaseP_bact_a links to Rfam database...	0.65	0.63	0.68	53	41538	35	1	24	10	31
ASE_00396	RNaseP_bact_a links to Rfam database...	0.16	0.16	0.16	13	41535	71	2	66	3	70
ASE_00397	RNaseP_bact_a links to Rfam database...	0.54	0.54	0.54	57	54510	51	4	44	3	48
ASE_00398	RNaseP_bact_a links to Rfam database...	0.61	0.58	0.65	60	55852	37	1	32	4	44
ASE_00400	RNaseP_bact_a links to Rfam database...	0.53	0.53	0.54	56	57866	51	7	41	3	50
ASE_00401	RNaseP_bact_a links to Rfam database...	0.52	0.53	0.51	67	76897	65	13	51	1	59
ASE_00402	RNaseP_bact_a links to Rfam database...	0.41	0.40	0.43	34	42406	52	7	39	6	51
ASE_00403	RNaseP_bact_a links to Rfam database...	0.44	0.42	0.47	45	55849	55	4	47	4	62
ASE_00404	RNaseP_bact_a links to Rfam database...	0.55	0.54	0.57	46	42990	43	0	35	8	39
ASE_00408	-	0.48	0.48	0.49	34	32316	41	2	33	6	37
ASE_00411	RNaseP_bact_a links to Rfam database...	0.35	0.35	0.35	31	49366	63	7	51	5	58
ASE_00413	RNaseP_bact_a links to Rfam database...	0.55	0.58	0.52	47	44461	44	13	30	1	34
ASE_00415	RNaseP_bact_a links to Rfam database...	0.51	0.51	0.51	53	54843	53	7	43	3	50
ASE_00416	RNaseP_bact_a links to Rfam database...	0.65	0.61	0.68	78	77307	43	0	36	7	49
ASE_00417	RNaseP_arch links to Rfam database...	0.36	0.37	0.35	37	54508	73	10	60	3	63
ASE_00418	RNaseP_arch links to Rfam database...	0.20	0.21	0.20	16	38701	67	12	52	3	59
ASE_00419	RNaseP_bact_a links to Rfam database...	0.75	0.73	0.78	75	54850	26	5	16	5	28
ASE_00420	RNaseP_nuc links to Rfam database...	0.62	0.63	0.61	40	43299	55	3	23	29	23
ASE_00422	RNaseP_bact_a links to Rfam database...	0.44	0.44	0.45	41	46880	56	5	45	6	53
ASE_00426	RNaseP_bact_a links to Rfam database...	0.28	0.28	0.28	30	60967	78	7	71	0	78
ASE_00427	RNaseP_nuc links to Rfam database...	0.15	0.20	0.12	9	40678	81	17	51	13	37
ASE_00428	RNaseP_bact_a links to Rfam database...	0.51	0.50	0.53	62	76520	58	5	49	4	63
ASE_00429	-	0.43	0.44	0.43	29	28136	40	8	30	2	37
ASE_00430	RNaseP_bact_a links to Rfam database...	0.64	0.63	0.66	61	46878	39	5	27	7	36
ASE_00431	RNaseP_bact_a links to Rfam database...	0.53	0.49	0.56	47	46276	41	6	31	4	48
ASE_00434	RNaseP_bact_b links to Rfam database...	0.61	0.60	0.62	66	68159	48	7	33	8	44
ASE_00437	RNaseP_bact_a links to Rfam database...	0.42	0.39	0.46	53	79285	64	4	59	1	82
ASE_00438	RNaseP_bact_a links to Rfam database...	0.46	0.43	0.50	50	65965	52	3	48	1	66
ASE_00441	RNaseP_bact_a links to Rfam database...	0.77	0.72	0.83	81	64163	30	1	16	13	31
ASE_00447	RNaseP_bact_a links to Rfam database...	0.47	0.45	0.50	52	60274	55	1	51	3	64
ASE_00448	RNaseP_bact_a links to Rfam database...	0.22	0.22	0.23	25	64150	91	6	80	5	87
ASE_00451	RNaseP_bact_a links to Rfam database...	0.61	0.57	0.66	71	70768	40	2	35	3	54
ASE_00452	-	0.85	0.85	0.85	33	20871	29	0	6	23	6
ASE_00453	-	0.58	0.62	0.55	32	34133	50	7	19	24	20
ASE_00454	RNaseP_nuc links to Rfam database...	0.48	0.48	0.48	30	43302	59	2	31	26	33
CRW_00001	-	0.48	0.47	0.49	99	3173737	672	15	89	568	110
CRW_00002	-	0.55	0.55	0.55	145	408798	132	32	85	15	119
CRW_00004	-	0.45	0.46	0.45	60	154156	110	10	64	36	71
CRW_00005	-	0.55	0.55	0.55	73	137943	86	13	46	27	59
CRW_00007	-	0.33	0.36	0.30	48	144832	112	35	76	1	85
CRW_00009	-	0.58	0.59	0.57	81	137934	83	9	51	23	57
CRW_00010	-	0.78	0.78	0.79	98	102707	45	6	20	19	28
CRW_00011	-	0.68	0.70	0.66	97	118194	63	7	43	13	41
CRW_00013	Intron_gpI links to Rfam database...	0.22	0.22	0.22	25	103625	113	13	77	23	90
CRW_00014	-	0.49	0.48	0.50	59	103621	74	10	50	14	64
CRW_00016	Intron_gpI links to Rfam database...	0.65	0.62	0.69	74	77313	47	5	29	13	46
CRW_00017	-	0.38	0.42	0.34	38	92124	95	19	54	22	53
CRW_00019	-	0.74	0.77	0.71	105	127617	51	15	28	8	32
CRW_00024	SSU_rRNA_archaea links to Rfam database...	0.78	0.77	0.79	351	1085158	132	17	75	40	107
CRW_00048	SSU_rRNA_bacteria links to Rfam database...	0.49	0.49	0.50	228	1170758	252	20	209	23	242
CRW_00054	SSU_rRNA_bacteria links to Rfam database...	0.46	0.46	0.46	208	1107368	260	31	209	20	248
CRW_00059	SSU_rRNA_bacteria links to Rfam database...	0.52	0.51	0.53	240	1172289	233	26	191	16	233
CRW_00061	SSU_rRNA_bacteria links to Rfam database...	0.55	0.54	0.55	259	1181483	231	27	184	20	217
CRW_00068	SSU_rRNA_bacteria links to Rfam database...	0.49	0.49	0.50	226	1108849	247	24	206	17	231
CRW_00096	SSU_rRNA_bacteria links to Rfam database...	0.46	0.46	0.47	214	1178420	264	32	214	18	251
CRW_00140	SSU_rRNA_bacteria links to Rfam database...	0.64	0.63	0.64	291	1135826	182	20	141	21	172
CRW_00141	SSU_rRNA_bacteria links to Rfam database...	0.59	0.58	0.60	274	1201566	212	26	159	27	202
CRW_00150	SSU_rRNA_bacteria links to Rfam database...	0.42	0.41	0.42	193	1152465	282	35	228	19	273
CRW_00152	SSU_rRNA_bacteria links to Rfam database...	0.64	0.62	0.65	293	1179965	180	30	128	22	178
CRW_00166	SSU_rRNA_bacteria links to Rfam database...	0.54	0.53	0.55	248	1190745	226	28	175	23	220
CRW_00173	SSU_rRNA_bacteria links to Rfam database...	0.29	0.29	0.29	127	1082216	323	37	276	10	318
CRW_00177	SSU_rRNA_bacteria links to Rfam database...	0.44	0.43	0.45	203	1178433	259	22	222	15	270
CRW_00196	SSU_rRNA_bacteria links to Rfam database...	0.47	0.46	0.48	220	1207772	267	24	219	24	255
CRW_00230	SSU_rRNA_bacteria links to Rfam database...	0.57	0.56	0.58	266	1198467	216	21	172	23	212
CRW_00245	SSU_rRNA_bacteria links to Rfam database...	0.38	0.38	0.38	172	1105880	289	44	232	13	281
CRW_00248	SSU_rRNA_bacteria links to Rfam database...	0.57	0.57	0.58	274	1218666	234	21	180	33	210
CRW_00250	SSU_rRNA_bacteria links to Rfam database...	0.44	0.44	0.45	210	1198459	274	34	223	17	268
CRW_00256	SSU_rRNA_bacteria links to Rfam database...	0.41	0.40	0.42	188	1192291	278	39	222	17	280
CRW_00270	SSU_rRNA_bacteria links to Rfam database...	0.44	0.43	0.45	196	1111850	260	40	200	20	259
CRW_00271	SSU_rRNA_bacteria links to Rfam database...	0.51	0.50	0.51	231	1122302	237	43	175	19	231
CRW_00273	SSU_rRNA_bacteria links to Rfam database...	0.59	0.58	0.60	258	1085174	195	26	143	26	188
CRW_00275	SSU_rRNA_bacteria links to Rfam database...	0.47	0.47	0.48	213	1114826	258	28	204	26	244
CRW_00277	SSU_rRNA_bacteria links to Rfam database...	0.38	0.38	0.38	172	1110338	300	45	240	15	281
CRW_00278	SSU_rRNA_bacteria links to Rfam database...	0.41	0.40	0.42	180	1129825	274	33	218	23	270
CRW_00279	SSU_rRNA_bacteria links to Rfam database...	0.51	0.49	0.53	229	1179985	227	29	173	25	235
CRW_00280	SSU_rRNA_bacteria links to Rfam database...	0.51	0.50	0.51	227	1117817	231	28	188	15	226
CRW_00281	SSU_rRNA_bacteria links to Rfam database...	0.30	0.30	0.29	138	1144872	347	41	290	16	326
CRW_00283	SSU_rRNA_bacteria links to Rfam database...	0.28	0.27	0.29	118	1015612	321	39	256	26	314
CRW_00284	SSU_rRNA_bacteria links to Rfam database...	0.28	0.27	0.28	124	1131316	337	30	290	17	332
CRW_00285	SSU_rRNA_bacteria links to Rfam database...	0.72	0.71	0.74	325	1117819	142	23	93	26	133
CRW_00289	SSU_rRNA_bacteria links to Rfam database...	0.46	0.45	0.48	214	1189204	258	34	201	23	262
CRW_00292	SSU_rRNA_bacteria links to Rfam database...	0.31	0.30	0.32	138	1123814	315	46	252	17	323
CRW_00294	-	0.26	0.28	0.25	163	2620247	578	92	403	83	423
CRW_00298	SSU_rRNA_eukarya links to Rfam database...	0.19	0.20	0.18	99	1620353	490	81	367	42	395
CRW_00301	SSU_rRNA_eukarya links to Rfam database...	0.30	0.31	0.30	162	1761957	428	86	298	44	357
CRW_00310	SSU_rRNA_eukarya links to Rfam database...	0.29	0.30	0.28	157	1805386	453	81	326	46	364
CRW_00326	SSU_rRNA_eukarya links to Rfam database...	0.41	0.41	0.42	204	1627621	339	47	238	54	298
CRW_00330	SSU_rRNA_eukarya links to Rfam database...	0.32	0.32	0.31	167	1988474	452	69	305	78	350
CRW_00332	SSU_rRNA_eukarya links to Rfam database...	0.18	0.20	0.17	94	1769479	492	105	343	44	383
CRW_00333	SSU_rRNA_eukarya links to Rfam database...	0.29	0.30	0.28	153	1891946	449	74	312	63	361
CRW_00338	-	0.13	0.14	0.12	57	1052947	427	76	346	5	338
CRW_00345	SSU_rRNA_eukarya links to Rfam database...	0.34	0.35	0.33	175	1586340	403	71	285	47	323
CRW_00348	SSU_rRNA_eukarya links to Rfam database...	0.25	0.25	0.24	127	1614982	437	68	326	43	376
CRW_00358	SSU_rRNA_eukarya links to Rfam database...	0.36	0.36	0.35	183	1674845	391	61	276	54	324
CRW_00366	SSU_rRNA_eukarya links to Rfam database...	0.35	0.36	0.33	174	1579230	395	88	261	46	308
CRW_00370	SSU_rRNA_eukarya links to Rfam database...	0.28	0.28	0.28	143	1640248	420	77	298	45	363
CRW_00371	SSU_rRNA_eukarya links to Rfam database...	0.29	0.29	0.28	145	1611389	409	77	299	33	351
CRW_00372	SSU_rRNA_eukarya links to Rfam database...	0.36	0.36	0.35	181	1625787	378	59	279	40	317
CRW_00374	-	0.44	0.45	0.43	246	2182438	413	58	263	92	304
CRW_00375	-	0.27	0.29	0.26	155	2298851	514	78	356	80	386
CRW_00379	SSU_rRNA_eukarya links to Rfam database...	0.42	0.43	0.41	227	2126401	423	55	270	98	307
CRW_00381	-	0.32	0.33	0.31	184	2303138	513	67	342	104	373
CRW_00386	SSU_rRNA_eukarya links to Rfam database...	0.24	0.25	0.23	129	1750683	478	83	361	34	386
CRW_00400	-	0.24	0.25	0.23	125	2677905	618	72	353	193	369
CRW_00403	SSU_rRNA_eukarya links to Rfam database...	0.31	0.31	0.30	146	1606035	431	65	282	84	318
CRW_00411	SSU_rRNA_eukarya links to Rfam database...	0.34	0.34	0.34	169	1615006	381	62	266	53	327
CRW_00414	SSU_rRNA_eukarya links to Rfam database...	0.27	0.28	0.26	140	1665694	436	77	314	45	355
CRW_00417	-	0.38	0.37	0.39	97	458157	161	21	128	12	165
CRW_00418	-	0.24	0.22	0.26	56	441113	170	17	144	9	204
CRW_00419	-	0.19	0.17	0.20	45	463945	187	22	154	11	220
CRW_00421	-	0.38	0.36	0.41	96	462968	155	22	117	16	170
CRW_00422	-	0.36	0.35	0.38	92	455291	171	23	129	19	171
CRW_00423	-	0.20	0.21	0.19	40	242347	179	28	141	10	149
CRW_00426	-	0.30	0.29	0.31	78	457195	183	24	149	10	187
CRW_00427	-	0.18	0.18	0.19	46	454337	212	30	168	14	215
CRW_00428	-	0.39	0.38	0.40	98	465847	162	29	121	12	162
CRW_00429	-	0.16	0.16	0.16	37	306704	200	45	150	5	196
CRW_00430	-	0.18	0.18	0.19	47	456245	207	30	168	9	219
CRW_00433	-	0.35	0.32	0.38	85	467807	142	19	117	6	178
CRW_00434	-	0.38	0.35	0.40	92	457218	146	18	118	10	171
CRW_00435	-	0.36	0.33	0.39	88	451501	148	14	122	12	177
CRW_00437	-	0.21	0.21	0.22	54	456242	197	25	169	3	206
CRW_00438	-	0.35	0.34	0.36	90	454332	170	19	140	11	178
CRW_00441	-	0.17	0.16	0.19	42	454357	187	31	151	5	220
CRW_00442	-	0.37	0.36	0.39	93	453388	156	25	122	9	168
CRW_00443	-	0.39	0.36	0.42	93	456266	153	18	113	22	167
CRW_00444	-	0.27	0.26	0.28	68	459119	181	24	150	7	195
CRW_00445	-	0.28	0.27	0.30	71	458168	175	24	140	11	194
CRW_00446	-	0.46	0.43	0.48	115	468758	135	14	109	12	150
CRW_00447	-	0.27	0.27	0.28	69	452428	194	23	156	15	191
CRW_00448	-	0.34	0.32	0.36	83	457215	169	23	125	21	178
CRW_00449	-	0.22	0.21	0.23	54	444861	185	20	161	4	206
CRW_00451	-	0.21	0.20	0.21	52	457204	204	25	165	14	212
CRW_00452	-	0.31	0.29	0.34	77	453399	174	20	132	22	185
CRW_00453	-	0.34	0.31	0.36	81	452454	150	22	119	9	180
CRW_00458	-	0.32	0.31	0.32	83	464873	185	34	140	11	181
CRW_00459	-	0.29	0.27	0.31	72	462011	176	27	131	18	191
CRW_00460	-	0.27	0.27	0.27	149	1972543	463	72	327	64	395
CRW_00462	-	0.28	0.27	0.30	70	458171	178	16	146	16	191
CRW_00463	-	0.34	0.33	0.35	85	445799	164	22	134	8	169
CRW_00464	-	0.39	0.36	0.42	95	462015	142	15	116	11	169
CRW_00466	SSU_rRNA_bacteria links to Rfam database...	0.60	0.59	0.62	268	1116330	196	21	146	29	190
CRW_00474	-	0.51	0.51	0.50	429	3976751	463	78	352	33	407
CRW_00476	-	0.39	0.40	0.39	349	4278379	577	75	472	30	530
CRW_00487	-	0.55	0.54	0.56	468	4223035	405	51	317	37	404
CRW_00488	-	0.41	0.41	0.41	359	4325336	540	80	436	24	527
CRW_00490	-	0.36	0.36	0.36	312	4144884	592	83	481	28	550
CRW_00496	-	0.42	0.41	0.43	355	4194028	507	59	414	34	511
CRW_00497	-	0.44	0.45	0.44	366	4402200	520	80	382	58	456
CRW_00499	-	0.43	0.42	0.43	370	4372547	511	63	423	25	513
CRW_00503	-	0.35	0.35	0.35	300	4252128	583	76	482	25	567
CRW_00507	-	0.30	0.30	0.30	257	4173750	615	69	529	17	608
CRW_00509	-	0.47	0.46	0.48	403	4182433	475	78	364	33	464
CRW_00511	-	0.34	0.34	0.35	290	4107580	558	57	484	17	566
CRW_00512	-	0.50	0.49	0.50	403	3814904	427	60	336	31	416
CRW_00518	-	0.26	0.25	0.26	224	4357757	657	75	572	10	660
CRW_00519	-	0.53	0.54	0.52	451	4246281	466	64	359	43	381
CRW_00521	-	0.36	0.36	0.36	305	4136289	554	83	449	22	539
CRW_00525	-	0.27	0.29	0.26	238	4058899	721	99	589	33	575
CRW_00530	-	0.35	0.37	0.33	99	534792	223	55	149	19	169
CRW_00532	-	0.12	0.14	0.11	36	579108	293	84	198	11	229
CRW_00534	-	0.29	0.30	0.28	145	1832136	410	68	306	36	338
CRW_00535	-	0.25	0.27	0.24	89	898092	316	73	216	27	239
CRW_00538	-	0.20	0.22	0.19	65	811827	304	77	206	21	235
CRW_00545	-	0.27	0.29	0.25	56	1343756	374	51	117	206	137
CRW_00547	-	0.47	0.47	0.47	406	4278413	487	64	392	31	457
CRW_00548	5S_rRNA links to Rfam database...	0.83	0.76	0.91	29	7349	6	0	3	3	9
CRW_00552	5S_rRNA links to Rfam database...	0.32	0.31	0.34	12	7105	26	2	21	3	27
CRW_00555	5S_rRNA links to Rfam database...	0.71	0.65	0.79	26	7593	8	0	7	1	14
CRW_00567	5S_rRNA links to Rfam database...	0.69	0.63	0.76	25	7470	10	2	6	2	15
CRW_00570	5S_rRNA links to Rfam database...	0.83	0.84	0.82	31	6865	10	0	7	3	6
CRW_00589	SSU_rRNA_bacteria links to Rfam database...	0.18	0.18	0.18	78	1094024	374	34	324	16	367
CRW_00590	SSU_rRNA_bacteria links to Rfam database...	0.36	0.36	0.37	161	1119326	290	30	239	21	291
CRW_00591	SSU_rRNA_bacteria links to Rfam database...	0.57	0.56	0.59	251	1098476	205	23	153	29	195
CRW_00594	-	0.22	0.24	0.20	93	1028441	382	52	309	21	302
CRW_00596	-	0.21	0.22	0.21	86	1024181	349	55	274	20	300
CRW_00598	SSU_rRNA_eukarya links to Rfam database...	0.31	0.33	0.29	162	1665675	440	88	300	52	329
CRW_00599	-	0.33	0.34	0.32	187	3754579	730	79	325	326	359
CRW_00601	-	0.20	0.25	0.17	17	186863	159	41	45	73	51
CRW_00602	-	0.09	0.13	0.06	9	223962	193	73	71	49	59
CRW_00603	-	0.00	0.00	0.00	0	192395	179	52	63	64	68
CRW_00604	-	0.52	0.57	0.48	46	411682	214	15	35	164	35
CRW_00605	-	0.54	0.54	0.54	38	183850	134	11	22	101	32
CRW_00606	-	0.66	0.64	0.68	59	559066	266	2	26	238	33
CRW_00607	-	0.55	0.53	0.56	41	536057	274	4	28	242	36
CRW_00608	-	0.77	0.76	0.79	60	35702	26	2	14	10	19
CRW_00610	Intron_gpI links to Rfam database...	0.42	0.42	0.43	34	36235	46	6	40	0	47
CRW_00612	-	0.63	0.61	0.66	57	270393	172	1	29	142	36
CRW_00613	Intron_gpI links to Rfam database...	0.46	0.42	0.51	33	34915	41	2	30	9	45
CRW_00614	Intron_gpI links to Rfam database...	0.07	0.09	0.06	5	121689	141	24	53	64	52
CRW_00617	-	0.66	0.64	0.68	41	426366	236	1	18	217	23
CRW_00619	Intron_gpI links to Rfam database...	0.38	0.42	0.34	31	164933	138	25	36	77	42
CRW_00620	Intron_gpI links to Rfam database...	0.16	0.21	0.12	13	150869	161	32	61	68	50
CRW_00621	Intron_gpI links to Rfam database...	0.10	0.10	0.10	7	153108	157	13	53	91	64
CRW_00623	Intron_gpI links to Rfam database...	0.30	0.29	0.32	24	129719	123	11	41	71	59
CRW_00626	-	0.61	0.64	0.57	67	100908	69	18	32	19	37
CRW_00629	-	0.55	0.55	0.55	67	91256	57	16	39	2	55
CRW_00633	Intron_gpI links to Rfam database...	0.45	0.44	0.47	47	63445	58	10	44	4	59
CRW_00635	-	0.47	0.45	0.48	62	109150	78	9	57	12	75
CRW_00637	-	0.30	0.30	0.31	48	133746	117	16	93	8	110
CRW_00641	-	0.65	0.66	0.65	50	39826	37	6	21	10	26
CRW_00642	-	0.48	0.52	0.44	34	47201	52	9	34	9	31
CRW_00643	-	0.42	0.45	0.39	55	123114	99	29	58	12	67
CRW_00645	-	0.79	0.84	0.75	56	35436	30	8	11	11	11
CRW_00646	-	0.87	0.84	0.90	54	34920	25	0	6	19	10
CRW_00648	-	0.61	0.64	0.59	94	137915	75	17	49	9	54
CRW_00649	-	0.73	0.74	0.72	92	204352	114	3	33	78	32
CRW_00650	-	0.46	0.46	0.46	65	112909	82	6	70	6	77
CRW_00652	-	0.65	0.67	0.63	87	132217	74	8	43	23	43
CRW_00654	-	0.70	0.68	0.72	84	78094	38	4	28	6	40
CRW_00655	-	0.70	0.69	0.71	86	89132	38	9	26	3	38
CRW_00659	-	0.37	0.41	0.33	25	32310	56	15	35	6	36
CRW_00661	-	0.20	0.22	0.19	11	24251	51	16	32	3	40
CRW_00662	-	0.31	0.31	0.32	20	28618	48	2	40	6	45
CRW_00663	-	0.14	0.15	0.13	9	26039	61	6	52	3	52
CRW_00664	-	0.05	0.05	0.04	4	53536	92	20	68	4	74
CRW_00665	-	0.17	0.19	0.16	9	23596	56	11	37	8	39
CRW_00666	-	0.51	0.52	0.50	65	96011	78	11	54	13	61
CRW_00668	-	0.35	0.37	0.34	56	163711	127	20	91	16	94
CRW_00669	-	0.51	0.50	0.52	59	97348	65	15	39	11	60
CRW_00670	Intron_gpI links to Rfam database...	0.77	0.74	0.81	89	70015	26	0	21	5	31
CRW_00671	Intron_gpI links to Rfam database...	0.66	0.64	0.68	75	62725	41	8	27	6	42
CRW_00672	Intron_gpI links to Rfam database...	0.74	0.73	0.74	81	72281	36	10	18	8	30
CRW_00674	Intron_gpI links to Rfam database...	0.55	0.55	0.55	68	83312	61	8	48	5	56
CRW_00676	Intron_gpI links to Rfam database...	0.54	0.56	0.52	64	93406	75	17	41	17	51
CRW_00677	-	0.53	0.53	0.52	56	71902	60	13	39	8	49
CRW_00678	-	0.66	0.64	0.67	78	666318	274	10	29	235	43
CRW_00679	-	0.22	0.22	0.22	24	76525	94	14	73	7	83
CRW_00681	-	0.46	0.50	0.42	56	112918	93	19	57	17	56
CRW_00684	-	0.34	0.39	0.29	53	611990	298	44	84	170	82
CRW_00685	-	0.38	0.42	0.34	44	156952	121	20	64	37	62
CRW_00687	-	0.68	0.74	0.63	49	28602	34	8	21	5	17
CRW_00689	-	0.70	0.71	0.68	55	33589	29	11	15	3	22
CRW_00690	-	0.65	0.65	0.65	45	33342	32	6	18	8	24
CRW_00691	-	0.53	0.57	0.50	38	27185	41	4	34	3	29
CRW_00692	Intron_gpI links to Rfam database...	0.57	0.57	0.57	51	68545	54	15	24	15	39
CRW_00693	-	0.58	0.57	0.58	70	89133	61	7	43	11	52
CRW_00694	-	0.63	0.63	0.63	77	85782	53	6	40	7	45
CRW_00699	-	0.65	0.61	0.69	77	91694	39	3	32	4	49
CRW_00700	-	0.70	0.70	0.70	103	180753	77	11	34	32	44
CRW_00704	-	0.81	0.80	0.82	75	386669	198	4	12	182	19
CRW_00706	-	0.45	0.51	0.39	30	695534	340	11	35	294	29
CRW_00708	-	0.24	0.39	0.15	26	3456960	728	99	50	579	40
CRW_00709	-	0.07	0.07	0.07	6	1728778	562	20	66	476	79
CRW_00710	-	0.66	0.65	0.67	74	1040293	375	8	28	339	40
CRW_00711	-	0.13	0.14	0.12	17	2318640	641	36	88	517	107
CRW_00712	-	0.47	0.54	0.41	58	952747	370	30	55	285	50
CRW_00713	-	0.56	0.57	0.55	58	731339	313	11	37	265	43
CRW_00714	-	0.20	0.22	0.18	24	186222	163	28	81	54	83
CRW_00715	-	0.63	0.60	0.66	62	69284	36	8	24	4	42
CRW_00716	-	0.35	0.35	0.34	31	193663	149	10	49	90	58
CRW_00717	-	0.68	0.66	0.69	98	153593	64	7	37	20	50
CRW_00718	-	0.79	0.75	0.82	144	189860	51	3	29	19	47
CRW_00719	-	0.42	0.43	0.41	39	230086	160	13	43	104	52
CRW_00721	-	0.52	0.60	0.46	41	58563	65	19	30	16	27
CRW_00723	-	0.27	0.35	0.21	26	1583185	519	41	58	420	48
CRW_00725	-	0.38	0.45	0.33	78	1956995	536	46	112	378	96
CRW_00727	-	0.40	0.48	0.34	56	303644	183	49	61	73	61
CRW_00728	-	0.27	0.30	0.25	36	272545	185	30	80	75	83
CRW_00729	-	0.28	0.32	0.25	39	191113	138	35	84	19	82
CRW_00730	-	0.46	0.52	0.41	84	338869	186	39	84	63	77
CRW_00732	-	0.16	0.23	0.11	27	3401890	751	114	105	532	90
CRW_00733	-	0.29	0.35	0.25	38	216657	176	38	78	60	71
CRW_00734	-	0.18	0.25	0.13	27	536961	263	99	79	85	83
CRW_00735	-	0.26	0.33	0.20	40	677832	298	85	73	140	81
CRW_00736	-	0.17	0.19	0.15	25	241689	189	43	103	43	106
CRW_00737	-	0.28	0.36	0.22	41	295876	182	73	75	34	73
CRW_00738	-	0.44	0.47	0.42	64	287509	177	21	67	89	73
CRW_00739	-	0.24	0.27	0.21	36	284465	198	27	107	64	99
CRW_00740	-	0.00	0.00	0.00	0	489332	297	100	123	74	113
CRW_00741	-	0.33	0.39	0.29	52	250099	153	36	91	26	83
CRW_00742	-	0.43	0.51	0.36	85	1723060	507	56	95	356	83
CRW_00744	-	0.84	0.82	0.86	152	3433333	706	2	23	681	34
CRW_00745	-	0.39	0.45	0.33	69	1343773	422	48	90	284	85
CRW_00746	-	0.45	0.47	0.44	102	550492	206	29	102	75	117
CRW_00747	-	0.13	0.14	0.12	26	3722137	789	49	144	596	162
CRW_00750	-	0.39	0.44	0.35	71	709632	301	38	95	168	89
CRW_00752	-	0.30	0.36	0.26	66	2975322	682	63	129	490	118
CRW_00753	-	0.15	0.16	0.14	29	489341	277	47	138	92	149
CRW_00756	-	0.48	0.50	0.47	86	194817	109	14	83	12	86
CRW_00758	SSU_rRNA_eukarya links to Rfam database...	0.29	0.30	0.29	144	1640268	416	66	288	62	339
CRW_00759	SSU_rRNA_eukarya links to Rfam database...	0.22	0.22	0.21	107	1636633	462	78	327	57	374
CRW_00760	SSU_rRNA_eukarya links to Rfam database...	0.28	0.29	0.28	140	1638458	411	74	283	54	346
CRW_00761	-	0.16	0.18	0.15	83	2863880	708	103	355	250	391
CRW_00763	SSU_rRNA_bacteria links to Rfam database...	0.38	0.37	0.40	165	1215603	304	24	228	52	281
CRW_00764	-	0.04	0.05	0.04	9	252909	203	35	163	5	187
CRW_00766	-	0.27	0.26	0.28	63	440168	177	20	140	17	177
CRW_00768	-	0.40	0.39	0.41	101	471658	164	22	125	17	158
CRW_00769	-	0.39	0.37	0.42	93	451502	148	20	110	18	159
CRW_00772	SSU_rRNA_bacteria links to Rfam database...	0.26	0.25	0.26	103	945610	313	37	250	26	301
CRW_00774	-	0.37	0.36	0.39	94	488322	170	17	133	20	169
CRW_00775	-	0.12	0.13	0.11	28	314576	220	60	157	3	184
CRW_00778	SSU_rRNA_bacteria links to Rfam database...	0.30	0.29	0.32	113	1201668	314	34	210	70	271
CRW_00779	-	0.30	0.30	0.30	126	1031350	307	35	255	17	296
CRW_00780	-	0.18	0.18	0.19	45	475569	201	21	165	15	210
CRW_00781	-	0.22	0.23	0.21	104	1978559	534	49	343	142	346
CRW_00783	-	0.37	0.36	0.38	93	453382	165	15	138	12	166
CRW_00784	-	0.37	0.35	0.39	93	456254	166	21	122	23	169
CRW_00785	-	0.35	0.33	0.36	84	452443	162	27	122	13	169
CRW_00787	-	0.23	0.24	0.23	74	646626	267	36	217	14	232
CRW_00788	-	0.23	0.24	0.22	85	1758363	476	50	252	174	276
CRW_00789	SSU_rRNA_bacteria links to Rfam database...	0.36	0.36	0.36	160	1137342	302	44	240	18	287
CRW_00790	-	0.18	0.19	0.18	85	1803571	519	41	353	125	362
CRW_00792	-	0.23	0.24	0.23	92	1581124	465	54	261	150	291
CRW_00793	-	0.33	0.34	0.33	127	1048686	318	55	208	55	250
CRW_00794	-	0.24	0.24	0.25	59	434543	196	15	161	20	187
CRW_00795	SSU_rRNA_bacteria links to Rfam database...	0.21	0.22	0.21	85	1152511	379	51	274	54	309
CRW_00796	-	0.20	0.20	0.21	47	384777	193	27	152	14	188
CRW_00797	-	0.26	0.26	0.26	90	692907	280	33	223	24	252
CRW_00800	SSU_rRNA_eukarya links to Rfam database...	0.55	0.53	0.57	251	1401532	269	24	168	77	219
CRW_00801	-	0.45	0.45	0.46	112	438270	149	29	105	15	137
CRW_00802	-	0.19	0.19	0.19	49	460062	218	33	176	9	204
CRW_00804	-	0.32	0.32	0.31	130	1420037	396	39	249	108	273
CRW_00807	-	0.41	0.40	0.41	161	1391552	340	38	195	107	237
CRW_00808	-	0.37	0.39	0.35	139	1301292	367	81	179	107	217
CRW_00815	-	0.71	0.72	0.72	113	159737	54	11	34	9	45
CRW_00816	-	0.36	0.36	0.35	47	143781	108	18	70	20	82
CRW_00820	-	0.57	0.58	0.56	84	136352	77	16	51	10	61
CRW_00849	SSU_rRNA_bacteria links to Rfam database...	0.49	0.48	0.49	227	1117798	259	23	212	24	243
CRW_01134	-	0.25	0.26	0.25	109	964912	341	41	293	7	318
CRW_01153	SSU_rRNA_eukarya links to Rfam database...	0.32	0.32	0.32	160	1606024	390	54	290	46	343
CRW_01168	-	0.39	0.39	0.39	160	900739	274	33	221	20	251
CRW_01171	SSU_rRNA_eukarya links to Rfam database...	0.32	0.33	0.31	167	1593473	402	81	284	37	339
CRW_01186	-	0.27	0.27	0.27	103	836190	293	44	234	15	283
CRW_01188	-	0.17	0.17	0.17	68	837466	339	48	283	8	325
CRW_01189	-	0.21	0.21	0.21	82	862242	334	47	270	17	310
CRW_01214	-	0.29	0.29	0.29	116	931900	288	36	243	9	289
CRW_01222	-	0.23	0.23	0.23	92	912871	321	54	259	8	305
CRW_01250	-	0.31	0.30	0.32	115	781518	257	33	209	15	263
CRW_01260	-	0.15	0.15	0.15	60	912885	340	48	283	9	333
CRW_01266	-	0.28	0.28	0.28	108	818174	292	43	235	14	273
CRW_01275	-	0.30	0.30	0.30	128	1082230	316	45	253	18	304
CRW_01283	-	0.40	0.40	0.40	163	963560	265	37	206	22	246
CRW_01300	SSU_rRNA_eukarya links to Rfam database...	0.36	0.37	0.35	189	1693186	392	71	274	47	326
CRW_01314	-	0.28	0.27	0.29	110	937386	284	37	232	15	297
CRW_01343	SSU_rRNA_archaea links to Rfam database...	0.37	0.37	0.37	160	977470	284	42	229	13	274
CRW_01344	-	0.30	0.30	0.30	110	791545	267	40	216	11	256
CRW_01456	-	0.33	0.33	0.32	282	4240460	604	73	513	18	569
CRW_01484	5S_rRNA links to Rfam database...	0.18	0.18	0.18	7	7464	34	4	28	2	32
CRW_01485	5S_rRNA links to Rfam database...	0.18	0.18	0.19	7	7467	30	2	27	1	32
CRW_01487	5S_rRNA links to Rfam database...	0.21	0.20	0.24	8	7469	26	3	23	0	33
CRW_01489	5S_rRNA links to Rfam database...	0.82	0.74	0.91	29	7471	6	0	3	3	10
CRW_01491	5S_rRNA links to Rfam database...	0.70	0.63	0.79	27	8351	11	0	7	4	16
CRW_01496	5S_rRNA links to Rfam database...	0.81	0.73	0.91	32	8093	9	0	3	6	12
CRW_01497	5S_rRNA links to Rfam database...	0.54	0.45	0.64	18	7112	14	0	10	4	22
CRW_01498	5S_rRNA links to Rfam database...	0.88	0.81	0.95	35	8091	4	0	2	2	8
CRW_01499	5S_rRNA links to Rfam database...	0.45	0.44	0.47	18	7963	21	3	17	1	23
CRW_01500	5S_rRNA links to Rfam database...	0.86	0.79	0.94	30	7718	6	0	2	4	8
CRW_01502	5S_rRNA links to Rfam database...	0.92	0.91	0.93	42	8340	7	0	3	4	4
CRW_01507	5S_rRNA links to Rfam database...	0.78	0.76	0.82	31	7465	9	0	7	2	10
CRW_01508	5S_rRNA links to Rfam database...	0.83	0.79	0.87	33	7963	11	0	5	6	9
CRW_01521	5S_rRNA links to Rfam database...	0.71	0.67	0.75	24	6871	12	0	8	4	12
CRW_01536	5S_rRNA links to Rfam database...	0.88	0.86	0.89	32	6985	4	0	4	0	5
CRW_01537	5S_rRNA links to Rfam database...	0.70	0.65	0.75	24	7108	14	0	8	6	13
CRW_01539	5S_rRNA links to Rfam database...	0.81	0.76	0.88	28	7108	10	0	4	6	9
CRW_01541	5S_rRNA links to Rfam database...	0.29	0.30	0.29	11	7102	28	6	21	1	26
CRW_01548	5S_rRNA links to Rfam database...	0.74	0.70	0.79	26	6988	12	0	7	5	11
CRW_01559	5S_rRNA links to Rfam database...	0.76	0.73	0.79	27	7226	13	0	7	6	10
CRW_01562	5S_rRNA links to Rfam database...	0.70	0.68	0.74	25	7106	12	1	8	3	12
CRW_01563	5S_rRNA links to Rfam database...	0.57	0.51	0.63	19	6873	12	2	9	1	18
CRW_01566	5S_rRNA links to Rfam database...	0.66	0.65	0.67	24	7104	15	0	12	3	13
CRW_01570	5S_rRNA links to Rfam database...	0.75	0.70	0.81	26	7108	12	0	6	6	11
CRW_01572	5S_rRNA links to Rfam database...	0.31	0.30	0.33	11	6988	22	4	18	0	26
CRW_01578	5S_rRNA links to Rfam database...	0.78	0.73	0.84	27	7108	10	0	5	5	10
CRW_01580	5S_rRNA links to Rfam database...	0.56	0.49	0.64	18	7112	16	0	10	6	19
CRW_01581	5S_rRNA links to Rfam database...	0.17	0.16	0.19	6	7109	25	2	23	0	31
CRW_01583	5S_rRNA links to Rfam database...	0.79	0.76	0.82	28	7106	10	0	6	4	9
CRW_01590	5S_rRNA links to Rfam database...	0.21	0.22	0.21	8	7102	30	6	24	0	29
CRW_01603	5S_rRNA links to Rfam database...	0.82	0.78	0.85	29	7106	8	0	5	3	8
CRW_01605	5S_rRNA links to Rfam database...	0.73	0.70	0.76	26	7106	13	0	8	5	11
CRW_01608	5S_rRNA links to Rfam database...	0.27	0.27	0.28	10	8349	27	1	25	1	27
CRW_01613	5S_rRNA links to Rfam database...	0.78	0.76	0.80	28	6986	10	0	7	3	9
CRW_01620	5S_rRNA links to Rfam database...	0.86	0.86	0.86	32	6984	8	0	5	3	5
CRW_01621	5S_rRNA links to Rfam database...	0.64	0.62	0.66	23	7105	16	0	12	4	14
CRW_01623	5S_rRNA links to Rfam database...	0.78	0.73	0.84	27	7108	6	0	5	1	10
NDB_00014	-	0.89	0.80	1.00	8	182	0	0	0	0	2
NDB_00015	-	0.38	0.40	0.40	4	266	6	0	6	0	6
NDB_00016	-	0.91	0.83	1.00	10	266	0	0	0	0	2
NDB_00047	-	0.91	0.83	1.00	10	266	0	0	0	0	2
NDB_00048	-	-0.02	0.00	0.00	0	1514	26	0	26	0	28
NDB_00049	-	0.92	0.85	1.00	11	314	0	0	0	0	2
PDB_00001	-	0.81	0.67	1.00	8	268	0	0	0	0	4
PDB_00002	-	0.87	0.88	0.88	7	202	1	0	1	0	1
PDB_00003	-	0.86	0.75	1.00	9	342	0	0	0	0	3
PDB_00004	-	0.86	0.74	1.00	14	806	0	0	0	0	5
PDB_00006	-	1.00	1.00	1.00	14	689	0	0	0	0	0
PDB_00011	-	0.91	0.83	1.00	10	266	0	0	0	0	2
PDB_00012	mir-TAR links to Rfam database...	1.00	1.00	1.00	7	399	3	0	0	3	0
PDB_00013	-	1.00	1.00	1.00	10	396	1	0	0	1	0
PDB_00017	-	0.77	0.60	1.00	9	694	0	0	0	0	6
PDB_00018	-	0.20	0.20	0.22	4	1017	14	2	12	0	16
PDB_00019	-	0.74	0.75	0.75	6	245	2	0	2	0	2
PDB_00020	-	0.38	0.35	0.44	7	764	9	0	9	0	13
PDB_00021	-	1.00	1.00	1.00	8	182	0	0	0	0	0
PDB_00022	-	0.94	0.89	1.00	8	245	0	0	0	0	1
PDB_00032	-	0.89	0.80	1.00	12	891	1	0	0	1	3
PDB_00034	-	0.66	0.58	0.78	7	369	2	0	2	0	5
PDB_00035	-	0.94	0.89	1.00	8	202	0	0	0	0	1
PDB_00036	-	-0.01	0.00	0.00	0	3461	27	1	24	2	27
PDB_00039	-	-0.01	0.00	0.00	0	5318	38	0	38	0	45
PDB_00040	-	0.83	0.70	1.00	7	269	0	0	0	0	3
PDB_00043	-	0.87	0.77	1.00	10	425	0	0	0	0	3
PDB_00048	-	0.82	0.78	0.88	7	292	3	0	1	2	2
PDB_00049	-	0.83	0.70	1.00	7	224	0	0	0	0	3
PDB_00054	-	0.77	0.60	1.00	6	184	0	0	0	0	4
PDB_00056	-	-0.02	0.00	0.00	0	618	12	0	12	0	16
PDB_00057	-	1.00	1.00	1.00	10	341	1	0	0	1	0
PDB_00065	-	0.77	0.60	1.00	6	400	1	0	0	1	4
PDB_00072	-	0.35	0.35	0.35	73	148033	136	10	124	2	137
PDB_00074	-	0.72	0.67	0.80	8	368	2	0	2	0	4
PDB_00078	-	0.47	0.45	0.50	52	49665	53	6	47	0	63
PDB_00079	-	0.65	0.62	0.69	88	121643	69	9	31	29	54
PDB_00081	-	0.94	0.89	1.00	8	182	0	0	0	0	1
PDB_00088	-	0.86	0.75	1.00	9	426	1	0	0	1	3
PDB_00096	-	0.82	0.75	0.90	9	315	1	0	1	0	3
PDB_00098	-	0.81	0.67	1.00	4	227	0	0	0	0	2
PDB_00104	-	-0.02	0.00	0.00	0	616	14	0	14	0	16
PDB_00107	-	0.95	0.91	1.00	10	455	1	0	0	1	1
PDB_00108	-	1.00	1.00	1.00	7	203	0	0	0	0	0
PDB_00110	-	1.00	1.00	1.00	7	246	0	0	0	0	0
PDB_00113	-	0.94	0.89	1.00	8	223	0	0	0	0	1
PDB_00115	-	-0.03	0.00	0.00	0	547	14	0	14	0	16
PDB_00116	-	0.60	0.50	0.75	3	227	2	0	1	1	3
PDB_00119	-	0.95	0.90	1.00	9	244	0	0	0	0	1
PDB_00120	-	0.95	0.90	1.00	9	222	0	0	0	0	1
PDB_00121	-	0.95	0.90	1.00	9	222	0	0	0	0	1
PDB_00122	-	0.91	0.83	1.00	10	290	0	0	0	0	2
PDB_00123	-	-0.01	0.00	0.00	0	4150	36	0	36	0	36
PDB_00125	-	-0.03	0.00	0.00	0	226	5	0	5	0	10
PDB_00130	-	1.00	1.00	1.00	6	270	2	0	0	2	0
PDB_00132	-	0.86	0.75	1.00	9	426	0	0	0	0	3
PDB_00136	-	0.76	0.73	0.79	19	2391	7	0	5	2	7
PDB_00138	-	0.72	0.63	0.83	5	372	1	0	1	0	3
PDB_00142	-	0.91	0.83	1.00	10	425	0	0	0	0	2
PDB_00149	-	0.89	0.80	1.00	12	691	0	0	0	0	3
PDB_00150	-	0.95	0.90	1.00	9	291	1	0	0	1	1
PDB_00153	-	0.95	0.90	1.00	9	244	0	0	0	0	1
PDB_00155	-	0.86	0.75	1.00	6	319	0	0	0	0	2
PDB_00157	-	0.28	0.24	0.33	7	3300	17	0	14	3	22
PDB_00158	-	0.77	0.60	1.00	12	849	0	0	0	0	8
PDB_00159	-	0.85	0.73	1.00	8	343	1	0	0	1	3
PDB_00160	-	0.94	0.89	1.00	8	268	0	0	0	0	1
PDB_00168	-	0.61	0.67	0.57	4	293	4	2	1	1	2
PDB_00169	-	0.83	0.70	1.00	7	224	0	0	0	0	3
PDB_00170	-	0.80	0.75	0.86	12	616	2	0	2	0	4
PDB_00171	-	0.50	0.42	0.63	5	427	3	0	3	0	7
PDB_00174	-	0.90	0.82	1.00	18	1017	0	0	0	0	4
PDB_00178	-	0.90	0.82	1.00	9	519	1	0	0	1	2
PDB_00181	-	0.88	0.78	1.00	7	224	0	0	0	0	2
PDB_00182	-	0.88	0.78	1.00	7	246	0	0	0	0	2
PDB_00183	-	0.91	0.83	1.00	19	1466	0	0	0	0	4
PDB_00184	-	0.87	0.77	1.00	10	551	0	0	0	0	3
PDB_00185	-	0.55	0.50	0.61	14	2903	10	0	9	1	14
PDB_00190	-	0.95	0.90	1.00	9	222	0	0	0	0	1
PDB_00192	-	0.24	0.19	0.30	7	3217	16	0	16	0	29
PDB_00195	-	0.26	0.24	0.29	10	3452	24	0	24	0	32
PDB_00197	-	1.00	1.00	1.00	7	293	3	0	0	3	0
PDB_00200	-	0.94	0.89	1.00	8	202	0	0	0	0	1
PDB_00201	-	0.77	0.60	1.00	6	319	0	0	0	0	4
PDB_00202	-	0.96	0.93	1.00	13	548	1	0	0	1	1
PDB_00203	-	0.96	0.92	1.00	12	549	0	0	0	0	1
PDB_00205	-	0.84	0.71	1.00	10	425	0	0	0	0	4
PDB_00206	-	1.00	1.00	1.00	8	268	1	0	0	1	0
PDB_00207	-	0.92	0.86	1.00	12	366	0	0	0	0	2
PDB_00209	-	-0.02	0.00	0.00	0	551	10	2	8	0	11
PDB_00211	-	0.89	0.80	1.00	8	182	0	0	0	0	2
PDB_00213	Gammaretro_CES links to Rfam database...	0.87	0.80	0.94	33	5015	2	0	2	0	8
PDB_00214	-	0.74	0.64	0.88	7	398	2	0	1	1	4
PDB_00215	-	-0.02	0.00	0.00	0	1106	22	0	22	0	24
PDB_00219	-	1.00	1.00	1.00	7	203	0	0	0	0	0
PDB_00221	-	0.88	0.78	1.00	7	246	0	0	0	0	2
PDB_00224	-	0.93	0.88	1.00	7	183	0	0	0	0	1
PDB_00234	-	0.81	0.67	1.00	8	268	0	0	0	0	4
PDB_00236	-	-0.02	0.00	0.00	0	1110	18	0	18	0	24
PDB_00237	-	0.88	0.78	1.00	7	371	1	0	0	1	2
PDB_00239	-	0.78	0.61	1.00	11	809	0	0	0	0	7
PDB_00243	-	0.67	0.58	0.78	7	621	3	0	2	1	5
PDB_00248	-	0.91	0.83	1.00	10	266	0	0	0	0	2
PDB_00249	-	-0.02	0.00	0.00	0	273	3	0	3	0	11
PDB_00250	-	0.85	0.76	0.95	19	1750	3	0	1	2	6
PDB_00252	-	-0.02	0.00	0.00	0	765	16	2	13	1	15
PDB_00254	-	-0.04	0.00	0.00	0	266	10	0	10	0	12
PDB_00257	-	0.76	0.73	0.80	8	341	2	0	2	0	3
PDB_00261	-	0.86	0.75	1.00	12	484	0	0	0	0	4
PDB_00262	-	0.25	0.25	0.27	6	1106	16	0	16	0	18
PDB_00267	-	-0.03	0.00	0.00	0	366	12	0	12	0	14
PDB_00278	-	0.13	0.13	0.13	9	24907	60	6	54	0	63
PDB_00286	-	-0.03	0.00	0.00	0	184	8	0	6	2	6
PDB_00312	-	1.00	1.00	1.00	9	426	0	0	0	0	0
PDB_00317	-	1.00	1.00	1.00	10	368	1	0	0	1	0
PDB_00339	-	0.75	0.63	0.91	10	655	1	0	1	0	6
PDB_00341	-	-0.02	0.00	0.00	0	691	12	0	12	0	16
PDB_00342	-	-0.02	0.00	0.00	0	762	18	0	18	0	10
PDB_00343	-	0.68	0.62	0.76	13	1579	5	0	4	1	8
PDB_00347	-	0.89	0.80	1.00	16	1160	0	0	0	0	4
PDB_00349	-	0.64	0.64	0.64	9	932	5	0	5	0	5
PDB_00351	-	-0.02	0.00	0.00	0	554	7	0	7	0	12
PDB_00352	-	0.89	0.79	1.00	15	1210	0	0	0	0	4
PDB_00357	-	-0.01	0.00	0.00	0	769	11	4	7	0	10
PDB_00358	-	0.00	0.00	0.00	0	10539	46	6	40	0	47
PDB_00365	-	0.96	0.93	1.00	13	422	0	0	0	0	1
PDB_00371	-	0.89	0.80	1.00	12	549	0	0	0	0	3
PDB_00377	-	0.83	0.83	0.83	10	516	2	0	2	0	2
PDB_00378	-	0.96	0.93	1.00	13	690	0	0	0	0	1
PDB_00400	-	-0.01	0.00	0.00	0	3136	25	0	24	1	34
PDB_00401	-	0.45	0.42	0.48	400	3996547	462	46	385	31	553
PDB_00402	tRNA links to Rfam database...	0.15	0.17	0.15	4	2748	23	2	21	0	19
PDB_00403	-	0.49	0.50	0.48	76	124590	93	16	68	9	77
PDB_00411	-	0.81	0.67	1.00	10	585	0	0	0	0	5
PDB_00417	-	0.10	0.11	0.11	6	14141	49	6	43	0	50
PDB_00420	-	0.89	0.80	1.00	8	488	3	0	0	3	2
PDB_00423	-	0.07	0.07	0.07	5	26723	68	7	61	0	69
PDB_00431	tRNA links to Rfam database...	0.65	0.65	0.65	13	2191	9	0	7	2	7
PDB_00433	-	0.18	0.18	0.20	6	6640	24	2	22	0	28
PDB_00447	-	0.41	0.36	0.47	16	7106	18	6	12	0	28
PDB_00454	-	-0.01	0.00	0.00	0	2669	32	0	32	0	32
PDB_00481	-	-0.01	0.00	0.00	0	1870	21	0	21	0	26
PDB_00513	-	0.85	0.86	0.86	6	224	1	0	1	0	1
PDB_00522	-	0.56	0.56	0.59	10	1111	7	0	7	0	8
PDB_00526	-	-0.01	0.00	0.00	0	298	6	0	2	4	3
PDB_00527	-	-0.01	0.00	0.00	0	297	6	0	3	3	5
PDB_00537	-	0.94	0.89	1.00	8	398	2	0	0	2	1
PDB_00553	mir-TAR links to Rfam database...	1.00	1.00	1.00	11	454	0	0	0	0	0
PDB_00565	-	0.77	0.70	0.85	35	8087	7	0	6	1	15
PDB_00570	-	-0.01	0.00	0.00	0	2257	21	2	19	0	22
PDB_00571	tRNA links to Rfam database...	-0.01	0.00	0.00	0	3302	20	5	14	1	25
PDB_00573	-	0.40	0.41	0.39	14	6634	24	4	18	2	20
PDB_00584	-	0.47	0.41	0.54	7	1472	6	0	6	0	10
PDB_00599	-	0.96	0.93	1.00	13	548	0	0	0	0	1
PDB_00601	-	0.32	0.32	0.33	25	36240	50	6	44	0	54
PDB_00603	-	0.95	0.90	1.00	9	244	0	0	0	0	1
PDB_00611	-	-0.01	0.00	0.00	0	770	10	1	9	0	11
PDB_00617	-	0.95	0.90	1.00	9	267	0	0	0	0	1
PDB_00627	-	0.72	0.71	0.75	12	1637	6	0	4	2	5
PDB_00629	-	-0.01	0.00	0.00	0	1637	16	0	16	0	23
PDB_00637	-	0.93	0.90	0.95	19	2326	4	0	1	3	2
PDB_00648	-	0.81	0.85	0.79	11	847	3	0	3	0	2
PDB_00675	-	0.44	0.41	0.47	399	4167977	482	45	407	30	575
PDB_00679	-	0.18	0.18	0.19	10	17526	50	3	39	8	46
PDB_00681	-	-0.01	0.00	0.00	0	1256	19	2	17	0	19
PDB_00682	-	-0.03	0.00	0.00	0	482	14	0	14	0	16
PDB_00686	-	0.94	0.89	1.00	17	686	0	0	0	0	2
PDB_00687	-	0.91	0.83	1.00	10	620	2	0	0	2	2
PDB_00692	-	0.11	0.10	0.15	2	1212	11	0	11	0	18
PDB_00693	-	0.94	0.88	1.00	15	1161	0	0	0	0	2
PDB_00701	-	0.47	0.46	0.49	50	45348	54	5	48	1	59
PDB_00702	-	-0.01	0.00	0.00	0	4337	34	2	32	0	36
PDB_00703	SSU_rRNA_bacteria links to Rfam database...	0.53	0.50	0.56	246	1073408	220	17	174	29	249
PDB_00704	-	0.47	0.44	0.51	431	4249217	451	57	365	29	542
PDB_00705	-	1.00	1.00	1.00	8	245	1	0	0	1	0
PDB_00709	-	-0.02	0.00	0.00	0	766	14	0	14	0	16
PDB_00710	-	-0.02	0.00	0.00	0	769	11	0	11	0	16
PDB_00713	-	0.24	0.24	0.25	5	1996	15	0	15	0	16
PDB_00716	HDV_ribozyme links to Rfam database...	-0.01	0.00	0.00	0	2677	25	1	23	1	23
PDB_00724	-	-0.01	0.00	0.00	0	2121	24	0	24	0	29
PDB_00725	-	0.74	0.67	0.83	10	583	2	0	2	0	5
PDB_00726	-	0.88	0.78	1.00	7	344	1	0	0	1	2
PDB_00727	-	1.00	1.00	1.00	7	554	3	0	0	3	0
PDB_00728	-	0.97	0.93	1.00	14	482	0	0	0	0	1
PDB_00733	-	-0.01	0.00	0.00	0	2897	29	1	28	0	30
PDB_00734	-	0.83	0.70	1.00	7	224	0	0	0	0	3
PDB_00737	-	0.95	0.91	1.00	10	341	0	0	0	0	1
PDB_00740	-	0.79	0.64	1.00	7	224	0	0	0	0	4
PDB_00741	Entero_5_CRE links to Rfam database...	0.87	0.76	1.00	13	690	0	0	0	0	4
PDB_00746	-	-0.01	0.00	0.00	0	4718	36	2	33	1	38
PDB_00747	-	0.68	0.61	0.77	49	24467	15	0	15	0	31
PDB_00750	-	0.79	0.73	0.86	36	11893	10	0	6	4	13
PDB_00751	-	0.87	0.77	1.00	10	585	2	0	0	2	3
PDB_00752	-	0.27	0.25	0.31	11	7345	27	0	25	2	33
PDB_00754	-	0.20	0.25	0.18	3	1468	16	4	10	2	9
PDB_00800	-	0.30	0.31	0.30	9	2050	21	1	20	0	20
PDB_00805	-	0.64	0.61	0.67	184	467752	116	18	74	24	118
PDB_00806	-	0.45	0.40	0.53	10	1811	10	0	9	1	15
PDB_00809	-	0.88	0.79	1.00	11	485	0	0	0	0	3
PDB_00810	s2m links to Rfam database...	0.77	0.71	0.86	12	1067	2	0	2	0	5
PDB_00815	-	0.58	0.56	0.63	5	622	5	0	3	2	4
PDB_00823	-	-0.03	0.00	0.00	0	185	5	0	5	0	9
PDB_00827	Intron_gpI links to Rfam database...	0.67	0.59	0.76	48	26965	16	0	15	1	33
PDB_00828	Purine links to Rfam database...	0.88	0.78	1.00	21	2464	0	0	0	0	6
PDB_00829	Purine links to Rfam database...	0.82	0.71	0.94	17	2260	1	0	1	0	7
PDB_00854	SSU_rRNA_bacteria links to Rfam database...	0.55	0.53	0.56	284	1500271	276	22	201	53	251
PDB_00855	-	1.00	1.00	1.00	10	455	1	0	0	1	0
PDB_00864	-	0.64	0.54	0.76	34	12996	12	0	11	1	29
PDB_00865	-	0.96	0.92	1.00	11	340	0	0	0	0	1
PDB_00870	-	-0.02	0.00	0.00	0	1109	19	0	19	0	16
PDB_00871	-	-0.02	0.00	0.00	0	1106	22	0	22	0	24
PDB_00873	-	-0.01	0.00	0.00	0	4514	46	0	46	0	48
PDB_00874	-	-0.02	0.00	0.00	0	931	15	0	15	0	20
PDB_00876	HIV_FE links to Rfam database...	0.97	0.95	1.00	19	971	0	0	0	0	1
PDB_00878	-	0.96	0.92	1.00	11	485	0	0	0	0	1
PDB_00879	-	0.85	0.74	0.97	29	5020	3	0	1	2	10
PDB_00885	-	0.97	0.94	1.00	17	803	0	0	0	0	1
PDB_00886	-	-0.01	0.00	0.00	0	4148	38	0	38	0	40
PDB_00890	-	-0.02	0.00	0.00	0	689	14	2	12	0	14
PDB_00891	-	-0.02	0.00	0.00	0	927	19	6	13	0	15
PDB_00892	-	-0.01	0.00	0.00	0	2533	23	4	19	0	15
PDB_00897	-	0.21	0.20	0.22	12	11422	42	4	38	0	49
PDB_00906	-	-0.01	0.00	0.00	0	6630	40	0	40	0	48
PDB_00917	-	0.49	0.47	0.51	45	35157	49	4	39	6	50
PDB_00919	RNaseP_bact_a links to Rfam database...	0.50	0.47	0.53	48	44163	45	3	39	3	55
PDB_00924	-	0.70	0.67	0.75	24	3623	8	0	8	0	12
PDB_00925	-	0.95	0.91	1.00	10	341	1	0	0	1	1
PDB_00928	-	0.66	0.63	0.71	5	293	2	0	2	0	3
PDB_00929	-	-0.02	0.00	0.00	0	768	12	0	12	0	20
PDB_00932	-	0.77	0.77	0.77	10	807	3	0	3	0	3
PDB_00937	-	0.94	0.89	1.00	16	614	0	0	0	0	2
PDB_00943	-	0.26	0.27	0.27	4	1416	13	2	9	2	11
PDB_00945	-	0.84	0.80	0.89	8	456	2	0	1	1	2
PDB_00960	-	-0.03	0.00	0.00	0	394	12	2	10	0	10
PDB_00966	-	-0.03	0.00	0.00	0	244	9	2	7	0	7
PDB_00974	-	-0.02	0.00	0.00	0	371	7	2	5	0	9
PDB_00979	-	0.00	0.00	0.00	0	11734	49	9	38	2	48
PDB_00980	-	0.39	0.41	0.37	17	11129	29	6	23	0	24
PDB_00985	-	0.23	0.27	0.21	17	30546	66	10	55	1	47
PDB_00986	-	0.72	0.64	0.82	9	424	2	0	2	0	5
PDB_00987	-	0.79	0.63	1.00	10	551	0	0	0	0	6
PDB_00989	-	0.79	0.72	0.87	26	2973	4	0	4	0	10
PDB_01000	-	0.39	0.43	0.36	13	10842	33	9	14	10	17
PDB_01009	tRNA links to Rfam database...	0.52	0.57	0.48	12	2460	13	5	8	0	9
PDB_01025	-	1.00	1.00	1.00	9	244	0	0	0	0	0
PDB_01035	-	0.79	0.69	0.90	18	1520	2	0	2	0	8
PDB_01040	-	0.30	0.30	0.32	6	1109	13	0	13	0	14
PDB_01044	-	0.94	0.94	0.94	15	930	4	0	1	3	1
PDB_01045	-	0.98	0.96	1.00	22	1203	1	0	0	1	1
PDB_01050	UnaL2 links to Rfam database...	0.96	0.92	1.00	12	618	2	0	0	2	1
PDB_01051	Telomerase-cil links to Rfam database...	0.75	0.69	0.82	9	892	6	0	2	4	4
PDB_01053	tRNA links to Rfam database...	0.94	0.94	0.94	15	1362	1	0	1	0	1
PDB_01054	-	0.43	0.44	0.42	19	11736	27	6	20	1	24
PDB_01056	-	0.94	0.89	1.00	8	245	1	0	0	1	1
PDB_01057	-	1.00	1.00	1.00	8	202	0	0	0	0	0
PDB_01060	-	-0.01	0.00	0.00	0	1990	26	0	26	0	21
PDB_01061	-	0.14	0.15	0.16	6	3122	32	0	32	0	34
PDB_01065	-	0.89	0.80	1.00	8	223	0	0	0	0	2
PDB_01070	-	0.31	0.30	0.33	16	12671	33	2	31	0	38
PDB_01071	-	0.69	0.62	0.80	8	396	2	0	2	0	5
PDB_01074	-	-0.01	0.00	0.00	0	2746	29	3	26	0	25
PDB_01075	-	0.76	0.69	0.85	22	2389	4	0	4	0	10
PDB_01077	-	0.86	0.79	0.94	15	1937	2	0	1	1	4
PDB_01084	-	1.00	1.00	1.00	7	224	0	0	0	0	0
PDB_01088	SSU_rRNA_bacteria links to Rfam database...	0.36	0.35	0.37	191	1470959	352	45	275	32	356
PDB_01092	glmS links to Rfam database...	0.69	0.60	0.79	31	10114	11	1	7	3	21
PDB_01097	-	0.93	0.88	1.00	7	203	0	0	0	0	1
PDB_01099	-	0.85	0.73	1.00	8	268	0	0	0	0	3
PDB_01100	-	0.85	0.73	1.00	16	1469	0	0	0	0	6
PDB_01103	SSU_rRNA_bacteria links to Rfam database...	0.56	0.54	0.58	306	1605999	254	32	191	31	256
PDB_01105	SSU_rRNA_bacteria links to Rfam database...	0.60	0.58	0.63	313	1433471	221	15	172	34	227
PDB_01108	-	1.00	1.00	1.00	9	222	0	0	0	0	0
PDB_01117	-	0.80	0.65	1.00	11	769	0	0	0	0	6
PDB_01119	-	0.92	0.86	1.00	12	618	0	0	0	0	2
PDB_01120	SSU_rRNA_bacteria links to Rfam database...	0.46	0.43	0.49	228	1204659	250	31	210	9	299
PDB_01126	-	-0.01	0.00	0.00	0	3051	30	4	26	0	28
PDB_01128	-	0.94	0.89	1.00	24	2751	0	0	0	0	3
PDB_01129	-	0.27	0.28	0.26	20	35433	64	15	43	6	51
PDB_01130	-	-0.01	0.00	0.00	0	1746	24	6	18	0	20
PDB_01133	-	1.00	1.00	1.00	10	341	0	0	0	0	0
PDB_01135	-	-0.02	0.00	0.00	0	396	10	2	8	0	9
PDB_01137	-	-0.02	0.00	0.00	0	317	8	2	6	0	8
PDB_01140	-	0.48	0.46	0.49	432	4176620	490	61	382	47	498
PDB_01144	-	0.26	0.24	0.28	31	82917	88	5	75	8	96
PDB_01145	-	-0.02	0.00	0.00	0	764	16	4	12	0	14
PDB_01150	-	0.93	0.88	1.00	7	224	0	0	0	0	1
PDB_01152	HIV_FS2 links to Rfam database...	0.96	0.93	1.00	13	548	0	0	0	0	1
PDB_01154	-	0.90	0.82	1.00	9	397	0	0	0	0	2
PDB_01156	-	-0.01	0.00	0.00	0	3797	31	0	31	0	35
PDB_01157	-	0.26	0.24	0.27	24	49998	64	11	53	0	74
PDB_01160	-	0.33	0.35	0.32	7	2058	15	4	11	0	13
PDB_01162	-	0.55	0.56	0.56	5	1531	8	0	4	4	4
PDB_01163	-	0.98	0.95	1.00	21	1014	0	0	0	0	1
PDB_01166	-	0.42	0.41	0.44	86	181912	115	21	87	7	126
PDB_01167	-	0.86	0.75	1.00	6	184	0	0	0	0	2
PDB_01168	-	0.86	0.75	1.00	6	184	0	0	0	0	2
PDB_01178	-	0.72	0.64	0.82	9	517	2	0	2	0	5
PDB_01187	-	0.55	0.50	0.60	26	9968	17	0	17	0	26
PDB_01193	-	0.42	0.41	0.43	62	105885	92	14	69	9	89
PDB_01199	-	0.18	0.17	0.22	4	2127	14	0	14	0	20
PDB_01205	-	-0.02	0.00	0.00	0	1015	20	4	16	0	18
PDB_01208	-	0.83	0.70	1.00	14	1162	0	0	0	0	6
PDB_01209	-	0.89	0.80	1.00	16	1160	0	0	0	0	4
PDB_01212	-	0.83	0.70	1.00	14	1162	0	0	0	0	6
PDB_01213	-	0.69	0.61	0.79	11	1067	3	0	3	0	7
PDB_01216	-	0.89	0.80	1.00	16	1160	0	0	0	0	4
PDB_01219	-	-0.02	0.00	0.00	0	928	18	0	18	0	20
PDB_01237	-	1.00	1.00	1.00	8	268	0	0	0	0	0
PDB_01249	-	-0.01	0.00	0.00	0	11111	64	12	52	0	54
PDB_01251	-	0.87	0.77	1.00	10	315	0	0	0	0	3
PDB_01255	-	0.68	0.61	0.77	34	12517	17	0	10	7	22
PDB_01260	-	-0.01	0.00	0.00	0	1809	21	0	21	0	25
PDB_01261	-	0.50	0.45	0.55	152	467752	128	4	120	4	184
PDB_01262	-	0.78	0.63	1.00	5	185	0	0	0	0	3
PDB_01273	SSU_rRNA_bacteria links to Rfam database...	0.51	0.48	0.53	237	1117812	242	21	190	31	254
PDB_01281	-	-0.03	0.00	0.00	0	366	12	0	12	0	14
PDB_01299	-	-0.01	0.00	0.00	0	893	10	2	8	0	15
PDB_01309	-	-0.01	0.00	0.00	0	9118	62	9	53	0	39
PDB_01313	-	-0.02	0.00	0.00	0	271	5	1	4	0	8
PDB_01325	-	0.91	0.83	1.00	10	266	0	0	0	0	2
PDB_01332	-	1.00	1.00	1.00	9	342	0	0	0	0	0
PDB_01337	-	-0.02	0.00	0.00	0	551	10	2	8	0	11
PDB_01338	-	-0.03	0.00	0.00	0	268	8	2	6	0	8
PDB_01340	-	-0.02	0.00	0.00	0	294	6	0	6	0	8
RFA_00389	Hammerhead_3 links to Rfam database...	1.00	1.00	1.00	15	1416	2	0	0	2	0
RFA_00390	Hammerhead_3 links to Rfam database...	1.00	1.00	1.00	15	1416	2	0	0	2	0
RFA_00391	Hammerhead_3 links to Rfam database...	0.93	0.87	1.00	13	1418	2	0	0	2	2
RFA_00396	Hammerhead_3 links to Rfam database...	0.97	0.93	1.00	14	1417	2	0	0	2	1
RFA_00402	Hammerhead_3 links to Rfam database...	1.00	1.00	1.00	15	1416	1	0	0	1	0
RFA_00409	Hammerhead_3 links to Rfam database...	0.97	0.93	1.00	14	1417	2	0	0	2	1
RFA_00416	Hammerhead_3 links to Rfam database...	0.93	0.93	0.93	14	1470	4	0	1	3	1
RFA_00420	-	1.00	1.00	1.00	15	3306	13	0	0	13	0
RFA_00425	Hammerhead_3 links to Rfam database...	0.93	0.87	1.00	13	1640	5	0	0	5	2
RFA_00427	Hammerhead_3 links to Rfam database...	0.97	0.93	1.00	14	1471	3	0	0	3	1
RFA_00433	Hammerhead_3 links to Rfam database...	1.00	1.00	1.00	15	1416	2	0	0	2	0
RFA_00434	Hammerhead_3 links to Rfam database...	1.00	1.00	1.00	15	1416	2	0	0	2	0
RFA_00436	Hammerhead_3 links to Rfam database...	1.00	1.00	1.00	15	1416	2	0	0	2	0
RFA_00440	Hammerhead_3 links to Rfam database...	1.00	1.00	1.00	15	1470	2	0	0	2	0
RFA_00442	Hammerhead_3 links to Rfam database...	1.00	1.00	1.00	15	1416	2	0	0	2	0
RFA_00444	Hammerhead_3 links to Rfam database...	1.00	1.00	1.00	15	1525	2	0	0	2	0
RFA_00446	Hammerhead_3 links to Rfam database...	0.97	0.93	1.00	14	1471	3	0	0	3	1
RFA_00449	Hammerhead_3 links to Rfam database...	0.97	0.93	1.00	14	1471	3	0	0	3	1
RFA_00582	Y_RNA links to Rfam database...	0.87	0.87	0.87	13	5980	23	0	2	21	2
RFA_00583	Y_RNA links to Rfam database...	0.41	0.40	0.43	6	4936	22	0	8	14	9
RFA_00585	Y_RNA links to Rfam database...	0.87	0.87	0.87	13	4836	13	0	2	11	2
RFA_00587	Y_RNA links to Rfam database...	0.87	0.87	0.87	13	4836	14	0	2	12	2
RFA_00588	Y_RNA links to Rfam database...	0.79	0.73	0.85	11	4547	14	0	2	12	4
RFA_00589	Y_RNA links to Rfam database...	0.79	0.73	0.85	11	4358	18	0	2	16	4
RFA_00590	-	0.86	0.80	0.92	12	5343	15	0	1	14	3
RFA_00594	Y_RNA links to Rfam database...	0.83	0.80	0.86	12	2761	13	0	2	11	3
RFA_00596	Y_RNA links to Rfam database...	0.00	0.00	0.00	0	5980	24	4	11	9	15
RFA_00597	Telomerase-vert links to Rfam database...	0.51	0.51	0.51	56	97794	82	5	48	29	53
RFA_00599	Telomerase-vert links to Rfam database...	0.67	0.70	0.64	78	101353	66	16	28	22	33
RFA_00601	Telomerase-vert links to Rfam database...	0.09	0.11	0.08	12	99092	139	35	96	8	102
RFA_00602	Telomerase-vert links to Rfam database...	0.50	0.53	0.47	62	101344	91	18	51	22	54
RFA_00603	Telomerase-cil links to Rfam database...	0.64	0.69	0.60	24	13490	20	4	12	4	11
RFA_00604	Telomerase-cil links to Rfam database...	0.72	0.74	0.70	26	13493	24	2	9	13	9
RFA_00606	Telomerase-cil links to Rfam database...	0.67	0.67	0.68	26	21283	26	7	5	14	13
RFA_00607	Telomerase-cil links to Rfam database...	0.57	0.61	0.54	22	17725	25	6	13	6	14
RFA_00609	Telomerase-cil links to Rfam database...	0.75	0.76	0.74	28	17917	28	2	8	18	9
RFA_00610	Telomerase-cil links to Rfam database...	0.77	0.76	0.78	28	17169	23	2	6	15	9
RFA_00611	Telomerase-cil links to Rfam database...	0.79	0.77	0.82	27	13008	13	0	6	7	8
RFA_00613	Telomerase-cil links to Rfam database...	0.61	0.60	0.62	21	12846	17	4	9	4	14
RFA_00615	Telomerase-cil links to Rfam database...	0.51	0.51	0.51	18	13331	18	8	9	1	17
RFA_00620	Telomerase-cil links to Rfam database...	0.64	0.62	0.67	24	21909	26	3	9	14	15
RFA_00621	RNase_MRP links to Rfam database...	0.39	0.39	0.38	30	46281	63	7	42	14	46
RFA_00623	RNase_MRP links to Rfam database...	0.46	0.45	0.47	35	43881	54	5	35	14	43
RFA_00624	RNase_MRP links to Rfam database...	0.43	0.46	0.41	28	30067	45	5	35	5	33
RFA_00626	rne5 links to Rfam database...	0.89	0.86	0.93	75	56535	31	2	4	25	12
RFA_00627	rne5 links to Rfam database...	0.48	0.47	0.48	41	56868	50	10	34	6	46
RFA_00628	rne5 links to Rfam database...	0.83	0.80	0.85	69	57210	38	1	11	26	17
RFA_00630	rne5 links to Rfam database...	0.60	0.60	0.60	52	56866	46	8	27	11	35
RFA_00632	HDV_ribozyme links to Rfam database...	0.40	0.39	0.41	11	4068	18	0	16	2	17
RFA_00636	HDV_ribozyme links to Rfam database...	0.42	0.43	0.43	12	3977	17	2	14	1	16
RFA_00639	7SK links to Rfam database...	0.49	0.49	0.49	43	54528	61	8	36	17	44
RFA_00644	Vimentin3 links to Rfam database...	-0.01	0.00	0.00	0	2681	21	4	16	1	18
RFA_00645	Vimentin3 links to Rfam database...	-0.01	0.00	0.00	0	2401	15	3	11	1	18
RFA_00649	Vimentin3 links to Rfam database...	0.65	0.61	0.69	11	2129	8	1	4	3	7
RFA_00653	Vimentin3 links to Rfam database...	0.34	0.33	0.35	6	2128	12	3	8	1	12
RFA_00654	Vimentin3 links to Rfam database...	0.27	0.28	0.28	5	2397	14	2	11	1	13
RFA_00658	Hammerhead_1 links to Rfam database...	0.69	0.64	0.75	9	1116	5	0	3	2	5
RFA_00659	Hammerhead_1 links to Rfam database...	0.30	0.29	0.33	4	1116	10	1	7	2	10
RFA_00664	Hammerhead_1 links to Rfam database...	0.07	0.07	0.09	1	979	11	0	10	1	13
RFA_00667	Hammerhead_1 links to Rfam database...	0.30	0.29	0.33	4	978	8	1	7	0	10
RFA_00668	Hammerhead_1 links to Rfam database...	0.41	0.43	0.40	6	975	9	0	9	0	8
RFA_00672	Hammerhead_1 links to Rfam database...	0.17	0.15	0.20	2	893	9	0	8	1	11
RFA_00673	Hammerhead_1 links to Rfam database...	0.42	0.36	0.50	5	1118	6	0	5	1	9
RFA_00674	Hammerhead_1 links to Rfam database...	0.69	0.71	0.67	10	1113	6	0	5	1	4
RFA_00675	Hammerhead_1 links to Rfam database...	0.29	0.29	0.31	4	977	9	1	8	0	10
RFA_00677	Hammerhead_1 links to Rfam database...	0.42	0.43	0.43	6	976	9	0	8	1	8
RFA_00678	Hammerhead_1 links to Rfam database...	0.66	0.64	0.69	9	933	4	0	4	0	5
RFA_00680	Hammerhead_1 links to Rfam database...	0.74	0.71	0.77	10	1115	6	0	3	3	4
RFA_00683	-	0.25	0.21	0.30	3	1025	8	0	7	1	11
RFA_00684	Hammerhead_1 links to Rfam database...	0.66	0.64	0.69	9	977	5	0	4	1	5
RFA_00685	Hammerhead_1 links to Rfam database...	0.42	0.36	0.50	5	980	6	0	5	1	9
RFA_00695	Hammerhead_1 links to Rfam database...	0.67	0.64	0.69	9	7008	29	1	3	25	5
RFA_00703	Hammerhead_1 links to Rfam database...	0.67	0.64	0.69	9	4265	18	1	3	14	5
RFA_00704	Hammerhead_1 links to Rfam database...	0.48	0.43	0.55	6	979	7	0	5	2	8
RFA_00705	Hammerhead_1 links to Rfam database...	0.69	0.71	0.67	10	1020	5	0	5	0	4
RFA_00706	Hammerhead_1 links to Rfam database...	0.44	0.36	0.56	5	1026	4	0	4	0	9
RFA_00707	Hammerhead_1 links to Rfam database...	0.07	0.07	0.10	1	1025	9	3	6	0	13
RFA_00708	Hammerhead_1 links to Rfam database...	0.47	0.36	0.63	5	1027	3	0	3	0	9
RFA_00709	Hammerhead_1 links to Rfam database...	0.16	0.14	0.20	2	980	9	0	8	1	12
RFA_00710	Hammerhead_1 links to Rfam database...	0.23	0.21	0.27	3	979	8	0	8	0	11
RFA_00711	Hammerhead_1 links to Rfam database...	0.40	0.36	0.45	5	1024	6	0	6	0	9
RFA_00716	Hammerhead_1 links to Rfam database...	0.06	0.07	0.08	1	933	12	0	12	0	13
RFA_00717	Hammerhead_1 links to Rfam database...	0.64	0.64	0.64	9	889	5	0	5	0	5
RFA_00720	-	0.41	0.43	0.40	6	1161	9	2	7	0	8
RFA_00721	-	0.29	0.29	0.31	4	1163	9	2	7	0	10
RFA_00730	s2m links to Rfam database...	0.69	0.67	0.73	8	892	4	1	2	1	4
RFA_00731	s2m links to Rfam database...	0.66	0.67	0.67	8	891	5	1	3	1	4
RFA_00733	s2m links to Rfam database...	0.66	0.67	0.67	8	891	5	1	3	1	4
RFA_00734	s2m links to Rfam database...	0.61	0.67	0.57	8	889	8	1	5	2	4
RFA_00736	s2m links to Rfam database...	0.66	0.67	0.67	8	891	5	1	3	1	4
RFA_00737	s2m links to Rfam database...	1.00	1.00	1.00	12	891	1	0	0	1	0
RFA_00745	s2m links to Rfam database...	0.66	0.67	0.67	8	934	5	1	3	1	4
RFA_00749	s2m links to Rfam database...	0.66	0.67	0.67	8	891	5	1	3	1	4
RFA_00758	s2m links to Rfam database...	0.96	0.92	1.00	11	892	1	0	0	1	1
RFA_00762	s2m links to Rfam database...	0.64	0.67	0.62	8	890	6	1	4	1	4
RFA_00763	s2m links to Rfam database...	1.00	1.00	1.00	12	891	1	0	0	1	0
RFA_00764	s2m links to Rfam database...	0.66	0.67	0.67	8	891	5	1	3	1	4
RFA_00765	s2m links to Rfam database...	1.00	1.00	1.00	12	891	1	0	0	1	0
RFA_00767	Corona_pk3 links to Rfam database...	0.63	0.56	0.71	10	1877	5	0	4	1	8
RFA_00768	Corona_pk3 links to Rfam database...	0.48	0.44	0.53	8	1876	8	1	6	1	10
RFA_00769	Corona_pk3 links to Rfam database...	0.55	0.56	0.56	10	1935	10	3	5	2	8
RFA_00770	Corona_pk3 links to Rfam database...	0.68	0.56	0.83	10	2004	6	0	2	4	8
RFA_00773	Corona_pk3 links to Rfam database...	0.71	0.56	0.91	10	1942	5	1	0	4	8
RFA_00781	Gammaretro_CES links to Rfam database...	0.55	0.56	0.55	18	5017	17	2	13	2	14
RFA_00786	Gammaretro_CES links to Rfam database...	0.71	0.72	0.70	23	5017	12	2	8	2	9
RFA_00791	Gammaretro_CES links to Rfam database...	0.50	0.50	0.52	16	5120	16	3	12	1	16
RFA_00792	Gammaretro_CES links to Rfam database...	0.90	0.88	0.93	28	5020	3	0	2	1	4
RFA_00801	Gammaretro_CES links to Rfam database...	0.59	0.59	0.59	19	5018	14	0	13	1	13
RFA_00808	RydC links to Rfam database...	-0.01	0.00	0.00	0	2001	16	2	13	1	16
RFA_00809	RydC links to Rfam database...	0.36	0.38	0.35	6	2128	12	1	10	1	10
RFA_00814	R2_retro_el links to Rfam database...	0.35	0.37	0.33	15	25155	42	7	23	12	26
RFA_00815	R2_retro_el links to Rfam database...	0.56	0.61	0.51	25	24482	35	8	16	11	16
RFA_00816	R2_retro_el links to Rfam database...	0.59	0.66	0.53	27	23169	33	13	11	9	14
RFA_00818	R2_retro_el links to Rfam database...	0.19	0.22	0.17	9	20247	48	19	26	3	32
RFA_00819	R2_retro_el links to Rfam database...	0.96	0.95	0.98	39	27926	32	0	1	31	2
RFA_00820	bicoid_3 links to Rfam database...	0.90	0.91	0.88	145	151361	34	1	18	15	15
RFA_00830	bicoid_3 links to Rfam database...	0.50	0.47	0.53	73	152490	110	5	60	45	81
SPR_00030	-	0.47	0.43	0.53	9	2468	8	0	8	0	12
SPR_00032	tRNA links to Rfam database...	0.93	0.90	0.95	19	2536	4	0	1	3	2
SPR_00074	tRNA links to Rfam database...	0.50	0.50	0.50	10	2830	11	2	8	1	10
SPR_00079	tRNA links to Rfam database...	0.97	0.95	1.00	18	2467	3	0	0	3	1
SPR_00127	-	0.25	0.28	0.24	5	2394	18	1	15	2	13
SPR_00191	tRNA links to Rfam database...	0.18	0.19	0.18	4	2828	18	4	14	0	17
SPR_00220	tRNA links to Rfam database...	0.23	0.25	0.23	5	3719	21	4	13	4	15
SPR_00297	tRNA links to Rfam database...	0.23	0.24	0.24	5	2754	16	1	15	0	16
SPR_00298	tRNA links to Rfam database...	0.24	0.25	0.24	5	2754	16	0	16	0	15
SPR_00327	tRNA links to Rfam database...	0.37	0.38	0.36	8	2981	15	2	12	1	13
SPR_00331	tRNA links to Rfam database...	0.32	0.35	0.30	7	2752	16	5	11	0	13
SPR_00333	tRNA links to Rfam database...	-0.01	0.00	0.00	0	2753	22	6	16	0	21
SPR_00365	-	0.60	0.59	0.62	13	2535	9	1	7	1	9
SPR_00366	-	0.54	0.50	0.59	10	2539	7	1	6	0	10
SPR_00367	-	0.42	0.41	0.45	9	2465	11	0	11	0	13
SPR_00416	tRNA links to Rfam database...	-0.01	0.00	0.00	0	3547	27	2	21	4	21
SPR_00461	tRNA links to Rfam database...	0.47	0.47	0.47	9	2537	12	1	9	2	10
SPR_00504	tRNA links to Rfam database...	0.46	0.50	0.43	10	2827	14	5	8	1	10
SPR_00505	tRNA links to Rfam database...	0.97	0.95	1.00	19	2907	3	0	0	3	1
SPR_00506	tRNA links to Rfam database...	0.97	0.95	1.00	19	2907	1	0	0	1	1
SPR_00509	tRNA links to Rfam database...	0.97	0.95	1.00	19	2907	3	0	0	3	1
SPR_00512	tRNA links to Rfam database...	0.97	0.95	1.00	19	2907	3	0	0	3	1
SPR_00513	tRNA links to Rfam database...	0.97	0.95	1.00	19	2907	1	0	0	1	1
SPR_00517	tRNA links to Rfam database...	-0.01	0.00	0.00	0	2828	23	5	17	1	20
SPR_00518	tRNA links to Rfam database...	0.55	0.55	0.55	11	2906	10	1	8	1	9
SPR_00552	tRNA links to Rfam database...	0.27	0.26	0.28	5	2683	13	2	11	0	14
SPR_00557	tRNA links to Rfam database...	0.40	0.43	0.39	9	2827	15	1	13	1	12
SPR_00610	tRNA links to Rfam database...	0.77	0.71	0.83	15	2538	4	0	3	1	6
SPR_00632	tRNA links to Rfam database...	0.87	0.80	0.94	16	2539	1	0	1	0	4
SPR_00633	tRNA links to Rfam database...	0.27	0.30	0.25	6	2532	18	2	16	0	14
SPR_01051	tRNA links to Rfam database...	0.60	0.62	0.59	13	2534	9	1	8	0	8
SRP_00001	Bacteria_large_SRP links to Rfam database...	0.89	0.90	0.88	36	6745	5	1	4	0	4
SRP_00002	Metazoa_SRP links to Rfam database...	0.81	0.79	0.82	81	45051	20	4	14	2	21
SRP_00005	-	0.28	0.29	0.27	7	3979	21	4	15	2	17
SRP_00006	Metazoa_SRP links to Rfam database...	0.82	0.81	0.84	82	45655	19	3	13	3	19
SRP_00007	-	0.74	0.73	0.75	33	11891	15	1	10	4	12
SRP_00008	Bacteria_small_SRP links to Rfam database...	0.70	0.72	0.69	18	2900	9	0	8	1	7
SRP_00011	Plant_SRP links to Rfam database...	0.43	0.42	0.45	44	46262	54	4	50	0	60
SRP_00015	Plant_SRP links to Rfam database...	0.54	0.53	0.55	52	46265	48	8	35	5	47
SRP_00016	Archaea_SRP links to Rfam database...	0.92	0.89	0.94	97	47792	8	0	6	2	12
SRP_00018	Fungi_SRP links to Rfam database...	0.71	0.68	0.73	55	38428	33	1	19	13	26
SRP_00019	Fungi_SRP links to Rfam database...	0.91	0.89	0.93	81	35959	12	4	2	6	10
SRP_00023	-	0.05	0.06	0.04	2	20865	47	9	34	4	33
SRP_00024	Bacteria_large_SRP links to Rfam database...	0.68	0.70	0.67	61	37584	31	4	26	1	26
SRP_00026	Bacteria_large_SRP links to Rfam database...	0.58	0.59	0.58	52	36766	46	4	34	8	36
SRP_00027	Bacteria_large_SRP links to Rfam database...	0.64	0.62	0.67	54	37047	28	3	24	1	33
SRP_00030	Bacteria_large_SRP links to Rfam database...	0.74	0.75	0.73	66	36766	26	4	20	2	22
SRP_00031	Bacteria_large_SRP links to Rfam database...	0.64	0.64	0.63	57	36225	37	4	29	4	32
SRP_00037	Bacteria_large_SRP links to Rfam database...	0.60	0.60	0.60	52	36498	37	4	31	2	35
SRP_00038	Bacteria_small_SRP links to Rfam database...	-0.01	0.00	0.00	0	5019	31	2	29	0	33
SRP_00040	Bacteria_small_SRP links to Rfam database...	0.70	0.74	0.66	23	5530	14	1	11	2	8
SRP_00042	Bacteria_small_SRP links to Rfam database...	0.38	0.40	0.37	10	3978	19	1	16	2	15
SRP_00043	Bacteria_small_SRP links to Rfam database...	0.45	0.48	0.42	14	5017	23	4	15	4	15
SRP_00044	Bacteria_small_SRP links to Rfam database...	0.77	0.75	0.80	24	6075	10	1	5	4	8
SRP_00051	Bacteria_small_SRP links to Rfam database...	0.09	0.10	0.09	3	5428	29	1	28	0	27
SRP_00054	Bacteria_small_SRP links to Rfam database...	-0.01	0.00	0.00	0	5531	34	3	31	0	32
SRP_00060	Metazoa_SRP links to Rfam database...	0.94	0.93	0.96	93	44454	10	0	4	6	7
SRP_00061	Metazoa_SRP links to Rfam database...	0.94	0.93	0.95	93	44752	12	0	5	7	7
SRP_00069	Fungi_SRP links to Rfam database...	0.57	0.55	0.59	47	34374	34	1	31	2	38
SRP_00070	Fungi_SRP links to Rfam database...	0.28	0.32	0.25	39	126599	128	30	88	10	82
SRP_00072	Bacteria_small_SRP links to Rfam database...	0.00	0.00	0.00	0	6296	32	3	29	0	29
SRP_00073	Fungi_SRP links to Rfam database...	0.65	0.70	0.60	50	38977	46	8	25	13	21
SRP_00074	Bacteria_small_SRP links to Rfam database...	0.39	0.41	0.38	12	6523	24	3	17	4	17
SRP_00075	Bacteria_small_SRP links to Rfam database...	0.82	0.79	0.84	27	5533	8	0	5	3	7
SRP_00076	-	0.00	0.00	0.00	0	25358	80	15	52	13	39
SRP_00077	Bacteria_small_SRP links to Rfam database...	0.15	0.16	0.15	6	6630	34	4	30	0	31
SRP_00079	Plant_SRP links to Rfam database...	0.52	0.55	0.50	48	41809	53	8	40	5	40
SRP_00081	Bacteria_small_SRP links to Rfam database...	0.68	0.74	0.62	23	5528	14	1	13	0	8
SRP_00084	Bacteria_small_SRP links to Rfam database...	0.81	0.82	0.80	28	5425	7	1	6	0	6
SRP_00085	Plant_SRP links to Rfam database...	0.64	0.63	0.65	64	45352	37	5	30	2	37
SRP_00086	Metazoa_SRP links to Rfam database...	0.71	0.71	0.70	71	44152	31	3	27	1	29
SRP_00087	Fungi_SRP links to Rfam database...	0.24	0.28	0.21	16	37323	71	20	42	9	42
SRP_00088	Bacteria_large_SRP links to Rfam database...	0.67	0.69	0.66	61	34098	32	3	29	0	28
SRP_00089	Bacteria_large_SRP links to Rfam database...	0.82	0.81	0.84	73	35691	14	1	13	0	17
SRP_00090	Bacteria_large_SRP links to Rfam database...	0.69	0.66	0.72	59	35429	25	1	22	2	31
SRP_00091	Fungi_SRP links to Rfam database...	0.80	0.82	0.79	78	52876	26	4	17	5	17
SRP_00093	-	0.33	0.40	0.27	10	14159	45	11	16	18	15
SRP_00094	Bacteria_small_SRP links to Rfam database...	0.86	0.88	0.84	21	4070	4	0	4	0	3
SRP_00095	Bacteria_small_SRP links to Rfam database...	0.81	0.84	0.78	21	3978	6	1	5	0	4
SRP_00098	Bacteria_small_SRP links to Rfam database...	0.66	0.68	0.66	25	6403	14	1	12	1	12
SRP_00099	Plant_SRP links to Rfam database...	0.57	0.57	0.57	54	44755	43	5	36	2	41
SRP_00104	Fungi_SRP links to Rfam database...	0.41	0.46	0.36	32	34365	59	12	44	3	37
SRP_00105	Bacteria_small_SRP links to Rfam database...	-0.01	0.00	0.00	0	5532	33	4	29	0	34
SRP_00106	Bacteria_large_SRP links to Rfam database...	0.67	0.76	0.59	19	5221	16	4	9	3	6
SRP_00107	Bacteria_small_SRP links to Rfam database...	0.13	0.16	0.12	3	3629	26	6	17	3	16
SRP_00108	-	0.65	0.70	0.61	49	38423	38	8	23	7	21
SRP_00117	Metazoa_SRP links to Rfam database...	0.63	0.62	0.64	63	45352	39	1	35	3	39
SRP_00118	-	0.86	0.85	0.87	81	39247	12	1	11	0	14
SRP_00119	-	0.85	0.84	0.86	43	12991	10	0	7	3	8
SRP_00120	-	0.58	0.53	0.62	46	37327	29	4	24	1	40
SRP_00124	Metazoa_SRP links to Rfam database...	0.53	0.52	0.55	44	37048	38	5	31	2	41
SRP_00127	Fungi_SRP links to Rfam database...	0.61	0.61	0.60	73	72268	55	8	41	6	46
SRP_00128	Bacteria_small_SRP links to Rfam database...	0.77	0.81	0.74	29	6747	12	1	9	2	7
SRP_00130	Archaea_SRP links to Rfam database...	0.24	0.24	0.24	23	49676	72	10	61	1	74
SRP_00135	-	0.81	0.82	0.79	42	14312	14	1	10	3	9
SRP_00136	Fungi_SRP links to Rfam database...	0.35	0.39	0.31	28	44163	69	13	49	7	43
SRP_00139	-	-0.01	0.00	0.00	0	2128	17	4	13	0	12
SRP_00141	Bacteria_small_SRP links to Rfam database...	0.86	0.85	0.88	35	6288	5	1	4	0	6
SRP_00142	Archaea_SRP links to Rfam database...	0.57	0.58	0.57	54	45961	43	5	36	2	39
SRP_00143	Archaea_SRP links to Rfam database...	0.36	0.38	0.35	38	49662	72	8	62	2	63
SRP_00144	Archaea_SRP links to Rfam database...	0.74	0.74	0.74	70	46571	31	1	23	7	24
SRP_00145	Bacteria_small_SRP links to Rfam database...	0.96	0.98	0.95	39	6287	3	1	1	1	1
SRP_00146	Bacteria_small_SRP links to Rfam database...	0.93	0.94	0.92	34	5216	3	1	2	0	2
SRP_00148	Fungi_SRP links to Rfam database...	0.31	0.33	0.29	29	49987	81	4	66	11	58
SRP_00152	Plant_SRP links to Rfam database...	0.56	0.56	0.57	58	45651	45	1	43	1	45
SRP_00157	Fungi_SRP links to Rfam database...	0.37	0.40	0.34	29	44167	65	15	42	8	43
SRP_00158	Fungi_SRP links to Rfam database...	0.30	0.37	0.25	42	124084	130	48	77	5	73
SRP_00160	Fungi_SRP links to Rfam database...	0.41	0.41	0.42	53	86194	74	4	69	1	77
SRP_00161	Bacteria_small_SRP links to Rfam database...	0.80	0.82	0.78	18	2827	5	0	5	0	4
SRP_00162	Bacteria_small_SRP links to Rfam database...	0.81	0.83	0.79	19	2902	6	0	5	1	4
SRP_00164	Bacteria_small_SRP links to Rfam database...	0.87	0.89	0.86	31	6867	6	1	4	1	4
SRP_00167	-	0.30	0.31	0.30	26	38694	66	6	55	5	58
SRP_00171	Metazoa_SRP links to Rfam database...	0.00	0.00	0.00	0	45348	103	15	88	0	88
SRP_00172	-	0.36	0.36	0.36	33	38968	60	5	54	1	58
SRP_00173	Bacteria_large_SRP links to Rfam database...	0.72	0.70	0.75	63	38142	29	1	20	8	27
SRP_00174	Bacteria_large_SRP links to Rfam database...	0.74	0.76	0.72	65	38691	29	8	17	4	21
SRP_00175	Fungi_SRP links to Rfam database...	0.51	0.52	0.49	44	44461	52	7	39	6	40
SRP_00178	Plant_SRP links to Rfam database...	0.83	0.78	0.87	80	45661	14	1	11	2	22
SRP_00180	-	0.71	0.72	0.70	39	22522	30	4	13	13	15
SRP_00181	Plant_SRP links to Rfam database...	0.33	0.31	0.35	32	45964	60	1	59	0	70
SRP_00182	Plant_SRP links to Rfam database...	0.76	0.73	0.79	74	45962	21	3	17	1	27
SRP_00184	Plant_SRP links to Rfam database...	0.62	0.60	0.64	60	45962	39	2	32	5	40
SRP_00193	-	0.67	0.67	0.69	24	6868	12	1	10	1	12
SRP_00197	Archaea_SRP links to Rfam database...	0.24	0.24	0.25	24	49359	72	7	65	0	77
SRP_00199	Archaea_SRP links to Rfam database...	0.67	0.66	0.68	69	50939	34	2	30	2	36
SRP_00200	Bacteria_small_SRP links to Rfam database...	0.44	0.44	0.43	16	6866	21	2	19	0	20
SRP_00201	Archaea_SRP links to Rfam database...	0.84	0.84	0.84	93	47784	20	5	13	2	18
SRP_00202	Archaea_SRP links to Rfam database...	0.95	0.93	0.96	109	54172	6	0	4	2	8
SRP_00203	Archaea_SRP links to Rfam database...	0.73	0.75	0.72	79	48718	37	3	28	6	26
SRP_00204	Archaea_SRP links to Rfam database...	0.68	0.68	0.69	69	49041	33	4	27	2	33
SRP_00206	Archaea_SRP links to Rfam database...	0.84	0.83	0.84	90	47788	18	5	12	1	18
SRP_00208	Archaea_SRP links to Rfam database...	0.83	0.82	0.85	83	46567	18	2	13	3	18
SRP_00209	Bacteria_small_SRP links to Rfam database...	0.73	0.74	0.71	20	4628	8	0	8	0	7
SRP_00214	-	0.90	0.92	0.88	22	3056	4	0	3	1	2
SRP_00216	Bacteria_small_SRP links to Rfam database...	0.93	0.93	0.93	25	3376	3	1	1	1	2
SRP_00221	-	0.68	0.71	0.65	15	3380	9	1	7	1	6
SRP_00222	Bacteria_small_SRP links to Rfam database...	0.94	0.96	0.92	24	3055	3	1	1	1	1
SRP_00227	Bacteria_small_SRP links to Rfam database...	0.89	0.90	0.88	28	5119	4	1	3	0	3
SRP_00230	Fungi_SRP links to Rfam database...	0.80	0.81	0.79	73	39529	23	3	16	4	17
SRP_00231	Bacteria_small_SRP links to Rfam database...	0.46	0.47	0.46	16	5425	19	1	18	0	18
SRP_00233	Bacteria_small_SRP links to Rfam database...	0.91	0.88	0.94	29	5120	2	0	2	0	4
SRP_00234	Bacteria_large_SRP links to Rfam database...	0.77	0.77	0.78	66	36230	25	1	18	6	20
SRP_00241	Plant_SRP links to Rfam database...	0.54	0.59	0.51	48	45961	50	11	36	3	34
SRP_00243	Bacteria_small_SRP links to Rfam database...	0.90	0.87	0.93	27	5122	3	0	2	1	4
SRP_00250	Bacteria_small_SRP links to Rfam database...	0.74	0.75	0.73	27	6749	13	1	9	3	9
SRP_00251	Bacteria_small_SRP links to Rfam database...	0.70	0.72	0.68	26	6983	12	1	11	0	10
SRP_00252	Metazoa_SRP links to Rfam database...	0.62	0.64	0.59	57	49045	42	12	27	3	32
SRP_00253	Metazoa_SRP links to Rfam database...	0.61	0.63	0.59	57	49359	44	7	32	5	33
SRP_00254	Fungi_SRP links to Rfam database...	0.43	0.48	0.39	29	32311	50	13	32	5	32
SRP_00257	Metazoa_SRP links to Rfam database...	0.85	0.87	0.84	94	50928	20	4	14	2	14
SRP_00261	-	0.79	0.79	0.80	82	45348	22	3	18	1	22
SRP_00263	-	0.75	0.77	0.74	80	48408	28	10	18	0	24
SRP_00265	Fungi_SRP links to Rfam database...	0.56	0.62	0.52	45	41241	55	9	33	13	28
SRP_00267	Metazoa_SRP links to Rfam database...	0.87	0.88	0.87	84	44454	19	0	13	6	12
SRP_00271	Bacteria_small_SRP links to Rfam database...	-0.01	0.00	0.00	0	3215	25	3	22	0	24
SRP_00273	Bacteria_small_SRP links to Rfam database...	0.86	0.88	0.85	35	6745	8	1	5	2	5
SRP_00274	Bacteria_small_SRP links to Rfam database...	0.91	0.92	0.90	35	6864	5	1	3	1	3
SRP_00276	Archaea_SRP links to Rfam database...	0.86	0.85	0.86	94	50612	16	5	10	1	16
SRP_00278	Archaea_SRP links to Rfam database...	0.72	0.72	0.71	76	45949	33	4	27	2	29
SRP_00282	Metazoa_SRP links to Rfam database...	0.32	0.37	0.28	23	43284	67	19	39	9	40
SRP_00286	Fungi_SRP links to Rfam database...	0.57	0.56	0.59	97	136861	77	4	64	9	77
SRP_00287	Fungi_SRP links to Rfam database...	0.64	0.65	0.64	105	141613	74	8	52	14	57
SRP_00290	Fungi_SRP links to Rfam database...	0.66	0.66	0.65	89	100440	57	2	45	10	46
SRP_00292	Fungi_SRP links to Rfam database...	0.58	0.55	0.61	96	137392	69	2	60	7	77
SRP_00294	Fungi_SRP links to Rfam database...	0.61	0.59	0.62	99	129126	67	4	57	6	68
SRP_00295	Bacteria_small_SRP links to Rfam database...	0.88	0.87	0.89	33	6866	6	1	3	2	5
SRP_00299	Metazoa_SRP links to Rfam database...	0.68	0.68	0.68	67	44155	32	3	28	1	32
SRP_00301	Fungi_SRP links to Rfam database...	0.85	0.85	0.86	73	32555	18	1	11	6	13
SRP_00302	Fungi_SRP links to Rfam database...	0.39	0.40	0.39	32	41533	61	7	44	10	49
SRP_00303	Bacteria_small_SRP links to Rfam database...	0.60	0.63	0.59	20	6636	14	1	13	0	12
SRP_00307	-	0.50	0.53	0.47	23	12831	26	10	16	0	20
SRP_00308	Bacteria_large_SRP links to Rfam database...	0.55	0.55	0.56	48	36229	42	9	29	4	40
SRP_00310	Bacteria_small_SRP links to Rfam database...	0.81	0.83	0.79	19	2902	6	0	5	1	4
SRP_00312	Bacteria_small_SRP links to Rfam database...	0.29	0.30	0.29	8	4158	20	4	16	0	19
SRP_00315	Bacteria_small_SRP links to Rfam database...	0.78	0.78	0.78	18	2903	5	0	5	0	5
SRP_00317	Metazoa_SRP links to Rfam database...	0.93	0.89	0.98	87	45061	10	0	2	8	11
SRP_00318	Bacteria_small_SRP links to Rfam database...	0.78	0.78	0.78	18	2980	5	0	5	0	5
SRP_00321	Archaea_SRP links to Rfam database...	0.77	0.77	0.78	83	47479	27	3	21	3	25
SRP_00322	Archaea_SRP links to Rfam database...	0.60	0.60	0.61	65	48409	43	2	40	1	44
SRP_00323	Archaea_SRP links to Rfam database...	0.90	0.89	0.90	95	47173	14	0	10	4	12
SRP_00324	Bacteria_small_SRP links to Rfam database...	0.58	0.62	0.55	18	5323	15	4	11	0	11
SRP_00325	Bacteria_small_SRP links to Rfam database...	1.00	1.00	1.00	33	4338	0	0	0	0	0
SRP_00330	Archaea_SRP links to Rfam database...	0.44	0.44	0.45	42	49992	54	2	50	2	53
SRP_00332	Archaea_SRP links to Rfam database...	0.90	0.90	0.91	95	50299	15	1	8	6	11
SRP_00335	Bacteria_large_SRP links to Rfam database...	0.32	0.44	0.24	17	35173	76	26	29	21	22
SRP_00336	-	0.18	0.19	0.17	15	38970	76	11	64	1	62
SRP_00337	Bacteria_large_SRP links to Rfam database...	0.73	0.71	0.76	65	35425	23	1	20	2	26
SRP_00338	Bacteria_small_SRP links to Rfam database...	0.92	0.92	0.92	33	5424	4	0	3	1	3
SRP_00339	Archaea_SRP links to Rfam database...	0.56	0.56	0.56	53	44456	45	5	37	3	41
SRP_00340	Metazoa_SRP links to Rfam database...	0.55	0.59	0.52	48	41235	47	9	36	2	34
SRP_00342	Bacteria_small_SRP links to Rfam database...	0.57	0.60	0.56	15	3978	17	1	11	5	10
SRP_00345	-	0.28	0.31	0.26	16	20645	51	12	33	6	36
SRP_00347	Metazoa_SRP links to Rfam database...	0.82	0.80	0.84	77	46573	21	3	12	6	19
SRP_00348	-	0.49	0.47	0.52	46	46883	42	4	38	0	52
SRP_00350	Bacteria_small_SRP links to Rfam database...	0.26	0.26	0.27	7	3890	19	2	17	0	20
SRP_00353	-	0.86	0.83	0.90	83	37858	10	0	9	1	17
SRP_00354	-	0.76	0.75	0.76	70	38689	25	0	22	3	23
SRP_00355	-	0.84	0.83	0.85	80	41811	19	2	12	5	16
SRP_00356	Bacteria_small_SRP links to Rfam database...	0.65	0.67	0.65	20	5019	14	2	9	3	10
SRP_00357	Bacteria_small_SRP links to Rfam database...	0.93	0.92	0.94	33	5321	3	1	1	1	3
SRP_00361	Plant_SRP links to Rfam database...	0.71	0.71	0.70	64	41814	37	3	24	10	26
SRP_00365	Bacteria_small_SRP links to Rfam database...	0.75	0.74	0.77	20	3377	6	0	6	0	7
SRP_00367	Bacteria_small_SRP links to Rfam database...	0.83	0.86	0.81	30	6749	7	2	5	0	5
SRP_00369	Bacteria_small_SRP links to Rfam database...	0.93	0.91	0.94	32	5744	2	1	1	0	3
SRP_00371	Fungi_SRP links to Rfam database...	0.53	0.54	0.52	44	36231	43	3	37	3	38
SRP_00382	Fungi_SRP links to Rfam database...	0.58	0.57	0.58	97	141612	80	6	63	11	73
SRP_00383	Bacteria_small_SRP links to Rfam database...	0.12	0.13	0.13	3	3216	21	3	18	0	21
TMR_00038	tmRNA links to Rfam database...	0.25	0.25	0.25	28	71140	89	12	73	4	82
TMR_00046	tmRNA links to Rfam database...	0.47	0.48	0.46	46	62734	61	10	45	6	50
TMR_00047	tmRNA links to Rfam database...	0.25	0.30	0.22	17	48438	76	16	45	15	40
TMR_00048	tmRNA links to Rfam database...	0.35	0.37	0.34	35	64876	73	9	60	4	60
TMR_00049	tmRNA links to Rfam database...	0.50	0.52	0.49	45	63098	59	9	38	12	42
TMR_00051	tmRNA links to Rfam database...	0.54	0.51	0.57	48	65619	56	2	34	20	46
TMR_00055	tmRNA links to Rfam database...	0.06	0.07	0.06	8	78870	125	25	100	0	106
TMR_00064	tmRNA links to Rfam database...	0.38	0.38	0.38	39	76925	72	19	45	8	64
TMR_00073	tmRNA links to Rfam database...	0.40	0.39	0.40	46	65588	70	7	62	1	71
TMR_00076	tmRNA links to Rfam database...	0.26	0.27	0.25	27	70768	87	15	66	6	73
TMR_00106	tmRNA links to Rfam database...	0.35	0.37	0.34	44	89969	91	20	67	4	76
TMR_00144	tmRNA links to Rfam database...	0.20	0.21	0.19	22	74189	96	15	79	2	81
TMR_00150	tmRNA links to Rfam database...	0.64	0.64	0.64	27	43029	50	2	13	35	15
TMR_00179	tmRNA links to Rfam database...	0.31	0.33	0.29	32	67050	85	14	65	6	66
TMR_00199	tmRNA links to Rfam database...	0.48	0.49	0.47	45	62740	57	21	29	7	47
TMR_00223	tmRNA links to Rfam database...	0.19	0.20	0.18	19	64158	88	22	62	4	76
TMR_00238	tmRNA links to Rfam database...	0.14	0.15	0.13	15	84553	106	15	83	8	86
TMR_00239	tmRNA links to Rfam database...	0.47	0.48	0.46	46	61676	57	11	43	3	50
TMR_00246	-	0.49	0.56	0.43	19	78166	109	5	20	84	15
TMR_00274	tmRNA links to Rfam database...	0.31	0.32	0.31	34	66684	83	11	66	6	71
TMR_00279	tmRNA links to Rfam database...	0.50	0.51	0.49	48	68908	60	10	40	10	46
TMR_00283	tmRNA links to Rfam database...	0.39	0.42	0.37	40	65233	71	19	49	3	56
TMR_00310	tmRNA links to Rfam database...	0.56	0.56	0.56	55	63805	48	9	34	5	43
TMR_00317	tmRNA links to Rfam database...	0.56	0.57	0.55	58	68160	50	14	33	3	44
TMR_00352	tmRNA links to Rfam database...	0.42	0.45	0.39	34	95179	91	17	36	38	41
TMR_00409	tmRNA links to Rfam database...	0.65	0.70	0.60	32	68582	75	7	14	54	14
TMR_00411	tmRNA links to Rfam database...	0.18	0.18	0.17	16	60983	83	14	62	7	71
TMR_00415	tmRNA links to Rfam database...	0.26	0.26	0.25	26	67059	76	13	63	0	75
TMR_00419	tmRNA links to Rfam database...	0.39	0.39	0.40	43	81703	83	10	54	19	68
TMR_00422	tmRNA links to Rfam database...	0.46	0.49	0.44	45	67793	67	14	44	9	47
TMR_00458	tmRNA links to Rfam database...	0.22	0.22	0.23	20	63458	76	7	61	8	73
TMR_00478	tmRNA links to Rfam database...	0.12	0.13	0.12	13	71900	100	29	68	3	86
TMR_00553	tmRNA links to Rfam database...	0.39	0.38	0.39	31	48126	54	7	41	6	50
TMR_00560	tmRNA links to Rfam database...	0.41	0.42	0.41	41	60975	67	6	53	8	57
TMR_00568	tmRNA links to Rfam database...	0.57	0.57	0.58	56	60629	50	3	38	9	43
TMR_00579	tmRNA links to Rfam database...	0.22	0.26	0.20	23	80485	102	21	72	9	67
TMR_00581	tmRNA links to Rfam database...	0.14	0.14	0.13	14	62376	98	9	82	7	84
TMR_00587	tmRNA links to Rfam database...	0.69	0.68	0.71	68	61329	33	4	24	5	32
TMR_00588	tmRNA links to Rfam database...	0.24	0.25	0.23	25	77311	94	24	61	9	76
TMR_00594	tmRNA links to Rfam database...	0.20	0.20	0.20	21	79294	90	15	71	4	83
TMR_00596	tmRNA links to Rfam database...	0.14	0.15	0.14	14	78107	99	16	73	10	81
TMR_00600	tmRNA links to Rfam database...	0.14	0.14	0.14	16	79684	100	18	82	0	99
TMR_00603	tmRNA links to Rfam database...	0.54	0.56	0.52	24	60332	82	7	15	60	19
TMR_00606	tmRNA links to Rfam database...	0.37	0.36	0.37	39	68900	77	5	62	10	68
TMR_00625	tmRNA links to Rfam database...	0.20	0.21	0.19	22	78889	96	28	64	4	84
TMR_00706	tmRNA links to Rfam database...	0.50	0.50	0.50	51	66328	55	6	45	4	52
TMR_00712	tmRNA links to Rfam database...	0.18	0.18	0.18	20	78497	101	14	75	12	89

^top

Matthews Correlation Coeffient, Sensitivity and Positive Predictive Value have been calculated based on the paper by Gardener & Giegerich, 2004.

Table of contents:

Overview

Performance plots

Performance of UNAFold - scored higher in this pairwise comparison

1. Total counts & total scores for UNAFold

2. Individual counts for UNAFold [ download as .csv ]

Performance of Afold - scored lower in this pairwise comparison

1. Total counts & total scores for Afold

2. Individual counts for Afold [ download as .csv ]