CompaRNA - on-line benchmarks of RNA structure prediction methods

Laboratory of Structural Bioinformatics @ Adam Mickiewicz University in Poznan

Home

Methods

Datasets

Rankings

RNA 2D Atlas

Help

FAQ

Contact us

RSS feeds

Twitter

Overview

Metric	CentroidHomfold‑LAST		McQFold
MCC	0.650	>	0.452
Average MCC ± 95% Confidence Intervals	0.636 ± 0.012	>	0.450 ± 0.012
Sensitivity	0.491	>	0.442
Positive Predictive Value	0.862	>	0.463
Total TP	36152	>	32575
Total TN	44958658	>	44930254
Total FP	7984	<	41970
Total FP CONTRA	1099	<	6243
Total FP INCONS	4665	<	31502
Total FP COMP	2220	<	4225
Total FN	37542	<	41119
P-value	3.56938820447e-08

^top

Performance plots

Comparison of performance of CentroidHomfold-LAST and McQFold. Positive Predictive Value (PPV) is plotted against sensitivity. Each dot represents a single test of each method. See tables below for raw data (individual counts for CentroidHomfold‑LAST and McQFold).
Average Matthews Correlation Coefficients (MCC) with 95% confidence intervals (CIs) were plotted for different RNA families, for which at least 3 members were present in the benchmarking dataset. 'n' denotes the number of MCCs used to calculate the average and CI. See tables below for raw data (individual counts for CentroidHomfold‑LAST and McQFold).
Comparison of average Matthews Correlation Coefficients (MCCs) for CentroidHomfold-LAST and McQFold. The whiskers correspond to 95% confidence intervals (CIs). 'n' denotes the number of MCCs used to calculate average MCCs and CIs. See tables below for raw data (individual counts for CentroidHomfold‑LAST and McQFold).

^top

Performance of CentroidHomfold‑LAST - scored higher in this pairwise comparison

1. Total counts & total scores for CentroidHomfold‑LAST

Total Base Pair Counts
Total TP	36152
Total TN	44958658
Total FP	7984
Total FP CONTRA	1099
Total FP INCONS	4665
Total FP COMP	2220
Total FN	37542

Total Scores
MCC	0.650
Average MCC ± 95% Confidence Intervals	0.636 ± 0.012
Sensitivity	0.491
Positive Predictive Value	0.862
Nr of predictions	759

^top

2. Individual counts for CentroidHomfold‑LAST [ download as .csv ]

RNA Chain	Rfam family	MCC	SENS	PPV	TP	TN	FP	FP CONTRA	FP INCONS	FP COMP	FN
ASE_00001	RNaseP_arch links to Rfam database...	0.77	0.60	0.98	45	34145	5	0	1	4	30
ASE_00002	RNaseP_arch links to Rfam database...	0.82	0.77	0.88	56	35447	11	1	7	3	17
ASE_00004	RNaseP_bact_a links to Rfam database...	0.66	0.46	0.94	45	47847	3	1	2	0	52
ASE_00005	RNaseP_bact_a links to Rfam database...	0.81	0.67	0.98	78	57890	3	0	2	1	39
ASE_00006	RNaseP_bact_a links to Rfam database...	0.67	0.52	0.87	48	47531	7	1	6	0	45
ASE_00007	RNaseP_bact_a links to Rfam database...	0.79	0.65	0.95	72	59609	9	0	4	5	38
ASE_00009	RNaseP_arch links to Rfam database...	0.56	0.34	0.92	23	26081	3	0	2	1	44
ASE_00010	RNaseP_bact_b links to Rfam database...	0.59	0.37	0.97	30	49739	1	0	1	0	52
ASE_00012	RNaseP_bact_a links to Rfam database...	0.76	0.62	0.94	76	73839	7	2	3	2	47
ASE_00014	RNaseP_arch links to Rfam database...	0.55	0.35	0.86	37	54242	6	1	5	0	69
ASE_00016	-	0.61	0.57	0.65	35	66012	34	3	16	15	26
ASE_00017	RNaseP_nuc links to Rfam database...	0.56	0.38	0.83	24	51011	5	0	5	0	40
ASE_00018	RNaseP_bact_a links to Rfam database...	0.82	0.70	0.95	94	80502	7	0	5	2	40
ASE_00020	RNaseP_bact_a links to Rfam database...	0.66	0.48	0.91	60	73854	7	1	5	1	66
ASE_00021	RNaseP_bact_a links to Rfam database...	0.67	0.47	0.96	75	104118	5	0	3	2	85
ASE_00022	RNaseP_bact_b links to Rfam database...	0.67	0.52	0.87	65	82953	13	0	10	3	59
ASE_00023	RNaseP_bact_a links to Rfam database...	0.63	0.41	0.96	52	84201	4	0	2	2	75
ASE_00024	-	0.45	0.20	1.00	14	29389	0	0	0	0	56
ASE_00025	RNaseP_nuc links to Rfam database...	0.54	0.35	0.83	25	78576	5	0	5	0	46
ASE_00026	RNaseP_bact_a links to Rfam database...	0.67	0.50	0.89	55	59623	8	0	7	1	55
ASE_00028	RNaseP_bact_b links to Rfam database...	0.70	0.53	0.92	67	84593	8	0	6	2	59
ASE_00029	RNaseP_bact_a links to Rfam database...	0.65	0.49	0.86	60	82958	11	0	10	1	62
ASE_00030	RNaseP_bact_a links to Rfam database...	0.53	0.30	0.93	43	85445	3	1	2	0	102
ASE_00031	RNaseP_bact_a links to Rfam database...	0.76	0.59	0.97	74	86660	4	0	2	2	52
ASE_00032	RNaseP_bact_a links to Rfam database...	0.70	0.57	0.87	67	80123	12	0	10	2	51
ASE_00033	RNaseP_bact_a links to Rfam database...	0.78	0.63	0.96	76	64901	4	0	3	1	45
ASE_00035	RNaseP_bact_a links to Rfam database...	0.65	0.44	0.95	52	70445	8	1	2	5	66
ASE_00036	RNaseP_bact_a links to Rfam database...	0.67	0.52	0.87	68	75777	13	3	7	3	64
ASE_00037	RNaseP_bact_a links to Rfam database...	0.78	0.65	0.94	72	59263	8	0	5	3	38
ASE_00038	RNaseP_bact_a links to Rfam database...	0.79	0.66	0.94	67	53557	5	1	3	1	34
ASE_00040	RNaseP_bact_a links to Rfam database...	0.64	0.44	0.94	59	78940	5	2	2	1	74
ASE_00041	RNaseP_bact_a links to Rfam database...	0.73	0.56	0.95	61	57566	7	0	3	4	47
ASE_00042	RNaseP_bact_a links to Rfam database...	0.74	0.58	0.93	84	90010	6	1	5	0	61
ASE_00044	RNaseP_bact_a links to Rfam database...	0.82	0.70	0.97	73	54540	3	0	2	1	32
ASE_00045	RNaseP_bact_b links to Rfam database...	0.53	0.33	0.87	26	47248	4	0	4	0	54
ASE_00046	RNaseP_bact_a links to Rfam database...	0.73	0.56	0.95	58	50342	3	0	3	0	45
ASE_00047	RNaseP_bact_a links to Rfam database...	0.71	0.50	1.00	65	74240	0	0	0	0	65
ASE_00052	RNaseP_bact_a links to Rfam database...	0.53	0.33	0.84	37	61381	7	0	7	0	75
ASE_00053	RNaseP_bact_a links to Rfam database...	0.61	0.44	0.85	58	79333	12	3	7	2	75
ASE_00056	-	0.59	0.35	1.00	25	30851	0	0	0	0	47
ASE_00057	RNaseP_bact_a links to Rfam database...	0.66	0.51	0.87	68	82137	13	5	5	3	66
ASE_00064	RNaseP_bact_a links to Rfam database...	0.75	0.61	0.93	54	45393	8	0	4	4	35
ASE_00066	RNaseP_bact_a links to Rfam database...	0.73	0.53	1.00	69	72321	0	0	0	0	61
ASE_00068	RNaseP_bact_a links to Rfam database...	0.70	0.49	1.00	42	37633	0	0	0	0	43
ASE_00069	RNaseP_bact_a links to Rfam database...	0.70	0.56	0.88	79	82938	14	5	6	3	61
ASE_00074	RNaseP_bact_a links to Rfam database...	0.76	0.62	0.94	74	67817	7	1	4	2	45
ASE_00075	RNaseP_bact_a links to Rfam database...	0.62	0.42	0.93	68	108738	7	1	4	2	94
ASE_00076	RNaseP_bact_a links to Rfam database...	0.60	0.38	0.96	45	68218	2	0	2	0	73
ASE_00077	RNaseP_bact_a links to Rfam database...	0.77	0.65	0.90	56	45088	7	2	4	1	30
ASE_00078	RNaseP_bact_a links to Rfam database...	0.82	0.72	0.94	60	43007	5	1	3	1	23
ASE_00079	RNaseP_bact_a links to Rfam database...	0.63	0.42	0.93	42	55566	4	0	3	1	58
ASE_00080	RNaseP_bact_a links to Rfam database...	0.48	0.30	0.77	37	71583	11	0	11	0	86
ASE_00081	RNaseP_bact_a links to Rfam database...	0.71	0.55	0.93	53	49713	5	1	3	1	44
ASE_00082	RNaseP_bact_a links to Rfam database...	0.44	0.22	0.89	25	70472	3	0	3	0	91
ASE_00083	RNaseP_bact_a links to Rfam database...	0.72	0.56	0.93	62	62414	6	1	4	1	48
ASE_00084	RNaseP_bact_a links to Rfam database...	0.73	0.62	0.87	61	53558	11	2	7	2	38
ASE_00087	RNaseP_bact_a links to Rfam database...	0.58	0.44	0.77	63	88328	21	2	17	2	81
ASE_00089	-	0.59	0.35	1.00	28	31347	1	0	0	1	51
ASE_00090	RNaseP_bact_a links to Rfam database...	0.69	0.60	0.78	61	55533	17	1	16	0	40
ASE_00092	RNaseP_bact_a links to Rfam database...	0.68	0.49	0.96	55	63489	4	0	2	2	58
ASE_00096	RNaseP_bact_a links to Rfam database...	0.51	0.30	0.89	34	63508	5	0	4	1	81
ASE_00099	RNaseP_bact_a links to Rfam database...	0.82	0.68	0.98	82	64536	3	1	1	1	38
ASE_00100	RNaseP_nuc links to Rfam database...	0.54	0.34	0.84	26	82184	6	0	5	1	50
ASE_00102	RNaseP_bact_a links to Rfam database...	0.50	0.27	0.94	45	117807	3	1	2	0	121
ASE_00104	RNaseP_bact_a links to Rfam database...	0.80	0.69	0.93	82	64173	7	1	5	1	37
ASE_00105	RNaseP_bact_a links to Rfam database...	0.61	0.43	0.87	48	64206	9	0	7	2	63
ASE_00107	RNaseP_bact_a links to Rfam database...	0.78	0.72	0.84	91	73045	19	1	16	2	36
ASE_00108	RNaseP_nuc links to Rfam database...	0.59	0.41	0.84	26	46940	5	0	5	0	37
ASE_00111	RNaseP_nuc links to Rfam database...	0.60	0.44	0.83	25	50056	5	0	5	0	32
ASE_00112	RNaseP_bact_a links to Rfam database...	0.79	0.64	0.99	74	75391	4	0	1	3	42
ASE_00114	RNaseP_bact_b links to Rfam database...	0.51	0.36	0.72	28	45412	14	0	11	3	49
ASE_00115	RNaseP_bact_a links to Rfam database...	0.68	0.50	0.93	51	54560	7	0	4	3	50
ASE_00116	RNaseP_arch links to Rfam database...	0.48	0.23	1.00	15	31611	2	0	0	2	51
ASE_00118	RNaseP_bact_a links to Rfam database...	0.52	0.27	1.00	28	60698	2	0	0	2	74
ASE_00119	RNaseP_bact_a links to Rfam database...	0.34	0.13	0.88	14	62819	2	0	2	0	94
ASE_00120	RNaseP_arch links to Rfam database...	0.67	0.53	0.85	50	46912	9	1	8	0	44
ASE_00121	RNaseP_arch links to Rfam database...	0.57	0.39	0.82	36	45106	8	1	7	0	56
ASE_00122	RNaseP_bact_a links to Rfam database...	0.78	0.61	1.00	54	43311	0	0	0	0	34
ASE_00123	RNaseP_bact_a links to Rfam database...	0.64	0.46	0.89	39	38459	6	1	4	1	46
ASE_00125	RNaseP_bact_a links to Rfam database...	0.68	0.50	0.92	44	39292	5	1	3	1	44
ASE_00126	RNaseP_bact_a links to Rfam database...	0.75	0.68	0.82	56	40402	13	1	11	1	26
ASE_00128	RNaseP_bact_a links to Rfam database...	0.72	0.56	0.93	56	53241	4	1	3	0	44
ASE_00129	RNaseP_bact_a links to Rfam database...	0.74	0.64	0.87	71	62753	13	1	10	2	40
ASE_00131	RNaseP_bact_a links to Rfam database...	0.63	0.45	0.88	38	39297	9	1	4	4	47
ASE_00132	RNaseP_bact_a links to Rfam database...	0.65	0.47	0.88	45	50352	7	2	4	1	50
ASE_00134	RNaseP_bact_a links to Rfam database...	0.74	0.61	0.91	58	50339	7	1	5	1	37
ASE_00135	RNaseP_bact_a links to Rfam database...	0.64	0.46	0.89	50	63134	7	1	5	1	59
ASE_00136	RNaseP_bact_a links to Rfam database...	0.75	0.61	0.92	56	48144	8	1	4	3	36
ASE_00137	RNaseP_bact_a links to Rfam database...	0.80	0.68	0.93	67	48444	5	1	4	0	31
ASE_00138	RNaseP_bact_a links to Rfam database...	0.80	0.65	0.98	53	40416	2	0	1	1	28
ASE_00139	RNaseP_bact_a links to Rfam database...	0.65	0.42	1.00	44	54241	0	0	0	0	60
ASE_00140	RNaseP_bact_a links to Rfam database...	0.66	0.47	0.92	59	70812	7	1	4	2	66
ASE_00142	RNaseP_bact_a links to Rfam database...	0.80	0.70	0.92	85	67069	8	3	4	1	37
ASE_00144	-	0.37	0.15	0.88	15	58294	2	0	2	0	82
ASE_00145	RNaseP_arch links to Rfam database...	0.64	0.50	0.81	56	70056	13	0	13	0	55
ASE_00146	RNaseP_bact_a links to Rfam database...	0.68	0.54	0.86	67	70798	12	1	10	1	57
ASE_00148	RNaseP_arch links to Rfam database...	0.49	0.27	0.89	41	112529	5	0	5	0	113
ASE_00151	RNaseP_bact_a links to Rfam database...	0.73	0.62	0.86	61	51932	10	4	6	0	37
ASE_00153	RNaseP_nuc links to Rfam database...	0.54	0.48	0.60	35	57572	43	2	21	20	38
ASE_00154	RNaseP_arch links to Rfam database...	0.60	0.43	0.85	46	65287	8	0	8	0	61
ASE_00155	RNaseP_arch links to Rfam database...	0.56	0.35	0.88	50	93471	7	0	7	0	92
ASE_00159	-	0.24	0.08	0.71	5	34973	3	0	2	1	56
ASE_00160	-	0.76	0.66	0.87	33	23833	12	0	5	7	17
ASE_00161	RNaseP_bact_b links to Rfam database...	0.71	0.53	0.96	46	53580	2	0	2	0	41
ASE_00163	RNaseP_bact_a links to Rfam database...	0.72	0.54	0.96	50	53249	2	0	2	0	43
ASE_00165	RNaseP_bact_a links to Rfam database...	0.67	0.50	0.89	51	52918	6	1	5	0	50
ASE_00168	RNaseP_nuc links to Rfam database...	0.44	0.25	0.76	16	60705	5	0	5	0	48
ASE_00169	RNaseP_bact_a links to Rfam database...	0.62	0.39	0.98	42	57248	1	0	1	0	65
ASE_00170	RNaseP_bact_a links to Rfam database...	0.70	0.55	0.89	51	48771	6	0	6	0	42
ASE_00171	RNaseP_bact_a links to Rfam database...	0.72	0.57	0.92	54	48457	7	1	4	2	40
ASE_00172	RNaseP_bact_a links to Rfam database...	0.69	0.49	0.98	52	58943	2	0	1	1	54
ASE_00174	RNaseP_bact_a links to Rfam database...	0.66	0.47	0.94	51	61021	3	1	2	0	58
ASE_00175	RNaseP_bact_a links to Rfam database...	0.53	0.42	0.66	45	59963	24	3	20	1	62
ASE_00176	RNaseP_bact_a links to Rfam database...	0.62	0.39	1.00	43	59988	0	0	0	0	67
ASE_00179	RNaseP_bact_a links to Rfam database...	0.71	0.52	0.96	44	44207	2	1	1	0	40
ASE_00180	RNaseP_bact_a links to Rfam database...	0.70	0.53	0.91	53	51302	6	0	5	1	47
ASE_00181	RNaseP_bact_a links to Rfam database...	0.71	0.54	0.95	57	57570	5	0	3	2	49
ASE_00182	RNaseP_bact_a links to Rfam database...	0.55	0.35	0.86	48	84199	8	1	7	0	88
ASE_00183	RNaseP_bact_a links to Rfam database...	0.67	0.47	0.96	53	61370	3	0	2	1	60
ASE_00184	RNaseP_bact_a links to Rfam database...	0.69	0.58	0.83	59	54544	13	2	10	1	43
ASE_00185	RNaseP_bact_a links to Rfam database...	0.62	0.41	0.95	52	73481	4	1	2	1	76
ASE_00186	RNaseP_bact_a links to Rfam database...	0.79	0.73	0.86	96	78892	16	1	14	1	36
ASE_00187	RNaseP_arch links to Rfam database...	0.65	0.44	0.94	51	68581	5	0	3	2	64
ASE_00189	RNaseP_bact_b links to Rfam database...	0.42	0.23	0.77	23	63160	7	0	7	0	79
ASE_00190	RNaseP_bact_b links to Rfam database...	0.46	0.23	0.91	21	45428	3	0	2	1	69
ASE_00191	RNaseP_arch links to Rfam database...	0.53	0.31	0.90	19	29625	2	0	2	0	42
ASE_00192	RNaseP_bact_b links to Rfam database...	0.30	0.09	1.00	12	84654	0	0	0	0	121
ASE_00194	RNaseP_bact_b links to Rfam database...	0.43	0.18	1.00	22	73514	0	0	0	0	97
ASE_00195	-	0.31	0.10	1.00	13	86307	0	0	0	0	120
ASE_00196	RNaseP_arch links to Rfam database...	0.65	0.47	0.90	35	31587	4	0	4	0	40
ASE_00197	RNaseP_bact_a links to Rfam database...	0.74	0.64	0.86	93	89145	15	1	14	0	52
ASE_00198	RNaseP_bact_a links to Rfam database...	0.80	0.68	0.96	69	52578	3	1	2	0	33
ASE_00203	RNaseP_bact_a links to Rfam database...	0.82	0.70	0.96	67	46595	4	1	2	1	29
ASE_00204	RNaseP_bact_b links to Rfam database...	0.33	0.13	0.83	15	67878	3	0	3	0	97
ASE_00205	RNaseP_arch links to Rfam database...	0.68	0.54	0.84	49	45998	12	0	9	3	41
ASE_00209	RNaseP_arch links to Rfam database...	0.63	0.45	0.87	40	43025	6	1	5	0	48
ASE_00210	RNaseP_arch links to Rfam database...	0.79	0.69	0.90	45	27211	5	0	5	0	20
ASE_00212	RNaseP_bact_a links to Rfam database...	0.75	0.65	0.86	96	93849	16	1	15	0	52
ASE_00213	RNaseP_arch links to Rfam database...	0.85	0.77	0.94	51	27207	5	0	3	2	15
ASE_00214	RNaseP_bact_a links to Rfam database...	0.69	0.59	0.80	61	56204	17	2	13	2	42
ASE_00215	RNaseP_bact_a links to Rfam database...	0.62	0.40	0.95	40	48474	3	1	1	1	59
ASE_00216	RNaseP_bact_a links to Rfam database...	0.82	0.71	0.95	58	39279	3	0	3	0	24
ASE_00217	RNaseP_bact_a links to Rfam database...	0.67	0.56	0.82	50	40409	14	1	10	3	40
ASE_00221	RNaseP_bact_a links to Rfam database...	0.75	0.61	0.93	71	64544	6	1	4	1	46
ASE_00222	RNaseP_arch links to Rfam database...	0.52	0.31	0.86	49	112044	8	0	8	0	108
ASE_00227	RNaseP_bact_a links to Rfam database...	0.41	0.18	0.92	24	78977	2	0	2	0	109
ASE_00228	RNaseP_bact_a links to Rfam database...	0.79	0.69	0.92	59	46907	6	2	3	1	27
ASE_00229	RNaseP_bact_a links to Rfam database...	0.79	0.69	0.90	60	42419	7	1	6	0	27
ASE_00231	RNaseP_bact_a links to Rfam database...	0.76	0.63	0.92	60	47830	5	1	4	0	36
ASE_00232	RNaseP_bact_a links to Rfam database...	0.85	0.75	0.95	63	38437	3	2	1	0	21
ASE_00234	RNaseP_bact_a links to Rfam database...	0.61	0.42	0.90	54	75406	8	1	5	2	75
ASE_00237	RNaseP_nuc links to Rfam database...	0.67	0.54	0.83	30	45717	6	0	6	0	26
ASE_00238	RNaseP_bact_a links to Rfam database...	0.57	0.37	0.89	42	64214	5	0	5	0	72
ASE_00240	RNaseP_bact_a links to Rfam database...	0.53	0.30	0.93	28	46635	2	1	1	0	65
ASE_00241	RNaseP_bact_a links to Rfam database...	0.73	0.64	0.84	56	43889	12	2	9	1	31
ASE_00242	RNaseP_bact_a links to Rfam database...	0.81	0.71	0.93	79	60990	7	0	6	1	33
ASE_00245	RNaseP_nuc links to Rfam database...	0.90	0.86	0.94	67	55207	31	0	4	27	11
ASE_00246	RNaseP_nuc links to Rfam database...	0.37	0.22	0.63	15	48181	9	1	8	0	52
ASE_00247	RNaseP_nuc links to Rfam database...	0.67	0.52	0.87	33	54247	5	0	5	0	31
ASE_00248	RNaseP_bact_a links to Rfam database...	0.82	0.71	0.94	81	62395	6	0	5	1	33
ASE_00250	RNaseP_bact_a links to Rfam database...	0.70	0.50	1.00	65	78938	0	0	0	0	66
ASE_00252	RNaseP_bact_a links to Rfam database...	0.58	0.37	0.93	62	115373	6	0	5	1	106
ASE_00254	RNaseP_bact_a links to Rfam database...	0.84	0.74	0.95	61	36792	4	2	1	1	21
ASE_00255	RNaseP_bact_a links to Rfam database...	0.73	0.57	0.94	74	74612	5	0	5	0	56
ASE_00257	RNaseP_bact_a links to Rfam database...	0.82	0.68	0.99	66	50973	2	0	1	1	31
ASE_00258	RNaseP_nuc links to Rfam database...	0.96	0.93	1.00	50	26746	5	0	0	5	4
ASE_00259	RNaseP_bact_a links to Rfam database...	0.60	0.40	0.91	48	73100	5	0	5	0	73
ASE_00263	RNaseP_bact_a links to Rfam database...	0.69	0.48	0.98	58	70441	2	0	1	1	62
ASE_00264	RNaseP_nuc links to Rfam database...	0.77	0.61	0.98	61	49079	7	0	1	6	39
ASE_00267	RNaseP_bact_a links to Rfam database...	0.72	0.66	0.79	58	45077	17	2	13	2	30
ASE_00270	RNaseP_bact_a links to Rfam database...	0.52	0.27	1.00	35	72355	0	0	0	0	93
ASE_00274	RNaseP_bact_a links to Rfam database...	0.66	0.47	0.92	48	55559	5	0	4	1	55
ASE_00277	RNaseP_bact_a links to Rfam database...	0.64	0.56	0.74	51	48136	21	3	15	3	40
ASE_00279	RNaseP_bact_a links to Rfam database...	0.72	0.58	0.89	59	53235	8	3	4	1	42
ASE_00280	RNaseP_bact_a links to Rfam database...	0.75	0.58	0.97	57	51944	3	0	2	1	41
ASE_00281	RNaseP_bact_a links to Rfam database...	0.81	0.68	0.97	60	44489	2	1	1	0	28
ASE_00282	RNaseP_bact_a links to Rfam database...	0.60	0.40	0.89	51	77758	7	3	3	1	76
ASE_00283	RNaseP_bact_a links to Rfam database...	0.71	0.56	0.91	60	61710	7	2	4	1	47
ASE_00284	RNaseP_bact_a links to Rfam database...	0.68	0.51	0.90	55	58250	7	2	4	1	53
ASE_00285	RNaseP_bact_a links to Rfam database...	0.63	0.44	0.89	54	68945	8	3	4	1	68
ASE_00286	RNaseP_bact_a links to Rfam database...	0.75	0.59	0.95	54	46608	3	1	2	0	38
ASE_00287	RNaseP_bact_a links to Rfam database...	0.66	0.49	0.91	50	54891	6	0	5	1	53
ASE_00288	RNaseP_bact_a links to Rfam database...	0.70	0.51	0.96	47	46007	2	0	2	0	46
ASE_00289	RNaseP_bact_a links to Rfam database...	0.53	0.30	0.94	47	100975	3	0	3	0	110
ASE_00291	-	0.46	0.23	0.92	22	48492	2	0	2	0	72
ASE_00292	RNaseP_bact_a links to Rfam database...	0.55	0.43	0.71	59	81727	25	3	21	1	79
ASE_00294	RNaseP_bact_a links to Rfam database...	0.75	0.60	0.94	103	114372	8	1	5	2	68
ASE_00295	RNaseP_bact_a links to Rfam database...	0.70	0.54	0.91	71	73842	8	1	6	1	60
ASE_00296	RNaseP_bact_a links to Rfam database...	0.71	0.53	0.96	77	91726	4	0	3	1	68
ASE_00297	RNaseP_bact_a links to Rfam database...	0.68	0.47	0.98	46	52928	1	0	1	0	52
ASE_00298	RNaseP_bact_a links to Rfam database...	0.62	0.39	1.00	44	67484	1	0	0	1	69
ASE_00299	RNaseP_bact_a links to Rfam database...	0.74	0.58	0.94	58	49393	8	1	3	4	42
ASE_00303	RNaseP_nuc links to Rfam database...	0.70	0.61	0.81	58	67824	24	0	14	10	37
ASE_00305	RNaseP_bact_b links to Rfam database...	0.81	0.71	0.94	60	54551	11	0	4	7	25
ASE_00313	RNaseP_nuc links to Rfam database...	0.62	0.52	0.74	46	62419	16	2	14	0	43
ASE_00316	RNaseP_nuc links to Rfam database...	0.57	0.41	0.78	40	107829	16	2	9	5	58
ASE_00318	RNaseP_bact_b links to Rfam database...	0.55	0.35	0.87	41	80153	12	0	6	6	77
ASE_00321	RNaseP_bact_b links to Rfam database...	0.81	0.67	0.98	59	54555	4	0	1	3	29
ASE_00322	-	0.74	0.79	0.69	38	29348	41	3	14	24	10
ASE_00327	RNaseP_nuc links to Rfam database...	0.78	0.70	0.87	62	57220	13	3	6	4	27
ASE_00328	RNaseP_bact_b links to Rfam database...	0.80	0.66	0.97	74	72695	9	0	2	7	38
ASE_00329	RNaseP_nuc links to Rfam database...	0.85	0.84	0.87	53	40694	31	6	2	23	10
ASE_00330	RNaseP_nuc links to Rfam database...	0.66	0.46	0.95	41	56237	6	0	2	4	49
ASE_00332	RNaseP_bact_a links to Rfam database...	0.80	0.71	0.89	98	81700	14	1	11	2	40
ASE_00335	RNaseP_bact_b links to Rfam database...	0.80	0.66	0.97	76	75388	8	0	2	6	40
ASE_00337	RNaseP_nuc links to Rfam database...	0.53	0.51	0.55	36	39275	45	5	24	16	35
ASE_00338	RNaseP_nuc links to Rfam database...	0.67	0.61	0.73	60	66348	36	3	19	14	38
ASE_00339	RNaseP_bact_a links to Rfam database...	0.79	0.64	0.97	76	80122	8	0	2	6	43
ASE_00340	RNaseP_bact_a links to Rfam database...	0.63	0.48	0.84	41	46007	11	6	2	3	44
ASE_00342	RNaseP_bact_a links to Rfam database...	0.82	0.75	0.90	86	62385	12	1	9	2	29
ASE_00343	RNaseP_bact_a links to Rfam database...	0.73	0.61	0.88	69	83358	16	0	9	7	44
ASE_00344	-	0.63	0.43	0.92	24	27235	5	0	2	3	32
ASE_00346	RNaseP_arch links to Rfam database...	0.52	0.41	0.67	40	48145	24	3	17	4	57
ASE_00350	-	0.62	0.40	0.95	21	29624	10	0	1	9	31
ASE_00353	RNaseP_bact_a links to Rfam database...	0.79	0.69	0.91	74	57889	7	1	6	0	33
ASE_00359	RNaseP_arch links to Rfam database...	0.44	0.23	0.86	18	42757	3	0	3	0	62
ASE_00360	RNaseP_arch links to Rfam database...	0.64	0.52	0.79	34	29360	9	1	8	0	31
ASE_00361	RNaseP_bact_a links to Rfam database...	0.65	0.43	0.96	55	75409	4	0	2	2	72
ASE_00362	RNaseP_bact_a links to Rfam database...	0.80	0.69	0.93	63	48137	7	1	4	2	28
ASE_00363	RNaseP_bact_a links to Rfam database...	0.75	0.64	0.88	60	51292	9	1	7	1	34
ASE_00364	RNaseP_bact_a links to Rfam database...	0.79	0.67	0.93	70	54210	6	1	4	1	35
ASE_00366	RNaseP_bact_a links to Rfam database...	0.68	0.49	0.94	48	58602	4	0	3	1	50
ASE_00367	RNaseP_bact_a links to Rfam database...	0.78	0.70	0.87	60	43002	11	1	8	2	26
ASE_00369	RNaseP_bact_a links to Rfam database...	0.79	0.64	0.97	68	55875	2	0	2	0	39
ASE_00370	RNaseP_bact_a links to Rfam database...	0.78	0.67	0.90	56	41843	7	1	5	1	28
ASE_00372	RNaseP_bact_a links to Rfam database...	0.70	0.54	0.90	54	51943	6	3	3	0	46
ASE_00374	RNaseP_bact_a links to Rfam database...	0.77	0.64	0.93	56	44790	4	2	2	0	32
ASE_00375	RNaseP_bact_a links to Rfam database...	0.71	0.50	1.00	55	60323	0	0	0	0	55
ASE_00376	RNaseP_bact_a links to Rfam database...	0.65	0.51	0.83	54	56888	15	0	11	4	51
ASE_00377	RNaseP_bact_a links to Rfam database...	0.75	0.62	0.92	66	57558	7	0	6	1	41
ASE_00379	RNaseP_bact_a links to Rfam database...	0.75	0.63	0.90	56	45994	6	2	4	0	33
ASE_00380	RNaseP_bact_a links to Rfam database...	0.69	0.47	1.00	47	54899	0	0	0	0	52
ASE_00382	RNaseP_bact_a links to Rfam database...	0.78	0.69	0.89	58	41840	8	1	6	1	26
ASE_00383	RNaseP_bact_a links to Rfam database...	0.79	0.66	0.95	69	54542	5	1	3	1	36
ASE_00384	RNaseP_bact_a links to Rfam database...	0.78	0.68	0.90	63	48446	8	1	6	1	29
ASE_00385	RNaseP_bact_a links to Rfam database...	0.68	0.53	0.88	43	41856	6	3	3	0	38
ASE_00386	RNaseP_bact_a links to Rfam database...	0.70	0.56	0.87	54	50341	9	1	7	1	42
ASE_00387	RNaseP_bact_a links to Rfam database...	0.63	0.45	0.87	47	55891	8	1	6	1	57
ASE_00388	RNaseP_bact_a links to Rfam database...	0.78	0.69	0.90	61	45685	9	1	6	2	28
ASE_00390	RNaseP_bact_a links to Rfam database...	0.81	0.72	0.91	61	42128	8	1	5	2	24
ASE_00393	RNaseP_bact_a links to Rfam database...	0.70	0.57	0.87	53	47834	9	1	7	1	40
ASE_00394	RNaseP_bact_a links to Rfam database...	0.72	0.62	0.83	58	46901	14	1	11	2	35
ASE_00395	RNaseP_bact_a links to Rfam database...	0.78	0.71	0.86	60	41546	12	1	9	2	24
ASE_00396	RNaseP_bact_a links to Rfam database...	0.78	0.71	0.86	59	41547	12	2	8	2	24
ASE_00397	RNaseP_bact_a links to Rfam database...	0.80	0.69	0.92	72	54537	7	1	5	1	33
ASE_00398	RNaseP_bact_a links to Rfam database...	0.68	0.53	0.87	55	55882	11	1	7	3	49
ASE_00400	RNaseP_bact_a links to Rfam database...	0.67	0.45	0.98	48	57921	1	0	1	0	58
ASE_00401	RNaseP_bact_a links to Rfam database...	0.60	0.37	0.98	47	76980	2	0	1	1	79
ASE_00402	RNaseP_bact_a links to Rfam database...	0.79	0.68	0.91	58	42422	8	1	5	2	27
ASE_00403	RNaseP_bact_a links to Rfam database...	0.75	0.63	0.91	67	55871	7	1	6	0	40
ASE_00404	RNaseP_bact_a links to Rfam database...	0.81	0.69	0.94	59	43008	5	0	4	1	26
ASE_00406	RNaseP_bact_a links to Rfam database...	0.73	0.62	0.85	58	48760	12	1	9	2	36
ASE_00408	-	0.73	0.66	0.80	47	32326	13	2	10	1	24
ASE_00409	-	0.27	0.07	1.00	6	41035	0	0	0	0	77
ASE_00411	RNaseP_bact_a links to Rfam database...	0.64	0.44	0.93	39	49413	3	0	3	0	50
ASE_00412	RNaseP_bact_a links to Rfam database...	0.62	0.40	0.98	42	58268	3	0	1	2	63
ASE_00413	RNaseP_bact_a links to Rfam database...	0.72	0.54	0.96	44	44505	2	0	2	0	37
ASE_00414	RNaseP_bact_a links to Rfam database...	0.62	0.47	0.80	45	46304	11	0	11	0	50
ASE_00415	RNaseP_bact_a links to Rfam database...	0.55	0.34	0.90	35	54907	4	0	4	0	68
ASE_00416	RNaseP_bact_a links to Rfam database...	0.58	0.36	0.92	46	77371	5	1	3	1	81
ASE_00417	RNaseP_arch links to Rfam database...	0.51	0.43	0.61	43	54545	28	1	26	1	57
ASE_00418	RNaseP_arch links to Rfam database...	0.42	0.33	0.53	25	38734	23	1	21	1	50
ASE_00419	RNaseP_bact_a links to Rfam database...	0.67	0.48	0.94	49	54894	3	1	2	0	54
ASE_00420	RNaseP_nuc links to Rfam database...	0.75	0.63	0.89	40	43320	10	0	5	5	23
ASE_00422	RNaseP_bact_a links to Rfam database...	0.72	0.55	0.95	52	46916	4	0	3	1	42
ASE_00423	RNaseP_bact_a links to Rfam database...	0.76	0.59	0.98	64	56888	2	1	0	1	45
ASE_00426	RNaseP_bact_a links to Rfam database...	0.52	0.27	1.00	29	61046	0	0	0	0	79
ASE_00427	RNaseP_nuc links to Rfam database...	0.48	0.43	0.54	20	40718	27	1	16	10	26
ASE_00428	RNaseP_bact_a links to Rfam database...	0.60	0.39	0.91	49	76582	6	1	4	1	76
ASE_00429	-	0.68	0.56	0.82	37	28158	12	1	7	4	29
ASE_00430	RNaseP_bact_a links to Rfam database...	0.77	0.61	0.98	59	46911	3	0	1	2	38
ASE_00431	RNaseP_bact_a links to Rfam database...	0.62	0.49	0.78	47	46300	13	1	12	0	48
ASE_00434	RNaseP_bact_b links to Rfam database...	0.50	0.26	0.94	29	68234	2	0	2	0	81
ASE_00437	RNaseP_bact_a links to Rfam database...	0.55	0.47	0.66	63	79305	35	1	32	2	72
ASE_00438	RNaseP_bact_a links to Rfam database...	0.43	0.18	1.00	21	66045	0	0	0	0	95
ASE_00441	RNaseP_bact_a links to Rfam database...	0.63	0.44	0.91	49	64207	9	0	5	4	63
ASE_00443	RNaseP_nuc links to Rfam database...	0.85	0.76	0.95	38	26756	24	0	2	22	12
ASE_00447	RNaseP_bact_a links to Rfam database...	0.73	0.55	0.97	64	60312	3	0	2	1	52
ASE_00448	RNaseP_bact_a links to Rfam database...	0.75	0.63	0.88	71	64180	11	1	9	1	41
ASE_00451	RNaseP_bact_a links to Rfam database...	0.77	0.72	0.83	90	70768	20	1	17	2	35
ASE_00452	-	0.89	0.87	0.92	34	20873	18	0	3	15	5
ASE_00453	-	0.78	0.63	0.97	33	34157	1	0	1	0	19
ASE_00454	RNaseP_nuc links to Rfam database...	0.46	0.38	0.55	24	43321	30	5	15	10	39
CRW_00010	-	0.74	0.56	0.97	71	102758	3	1	1	1	55
CRW_00011	-	0.77	0.61	0.97	84	118254	4	1	2	1	54
CRW_00013	Intron_gpI links to Rfam database...	0.62	0.42	0.92	48	103688	4	0	4	0	67
CRW_00014	-	0.42	0.33	0.54	40	103666	43	9	25	9	83
CRW_00016	Intron_gpI links to Rfam database...	0.70	0.50	0.97	60	77359	2	0	2	0	60
CRW_00017	-	0.00	0.00	0.00	0	92235	0	0	0	0	91
CRW_00608	-	0.68	0.47	1.00	37	35741	1	0	0	1	42
CRW_00610	Intron_gpI links to Rfam database...	0.66	0.46	0.95	37	36276	2	0	2	0	44
CRW_00611	-	0.62	0.39	1.00	29	31346	1	0	0	1	46
CRW_00613	Intron_gpI links to Rfam database...	0.74	0.55	1.00	43	34937	0	0	0	0	35
CRW_00614	Intron_gpI links to Rfam database...	0.21	0.18	0.25	10	121731	73	7	23	43	47
CRW_00618	Intron_gpI links to Rfam database...	0.38	0.25	0.58	15	56254	20	1	10	9	46
CRW_00626	-	0.75	0.65	0.87	68	100947	29	0	10	19	36
CRW_00629	-	0.71	0.52	0.97	63	91313	2	1	1	0	59
CRW_00632	-	0.69	0.50	0.96	64	82961	5	1	2	2	64
CRW_00633	Intron_gpI links to Rfam database...	0.64	0.42	0.98	45	63500	2	1	0	1	61
CRW_00634	Intron_gpI links to Rfam database...	0.69	0.54	0.88	51	64562	7	1	6	0	43
CRW_00635	-	0.59	0.36	0.96	49	109227	4	0	2	2	88
CRW_00636	-	0.51	0.29	0.89	42	114913	5	1	4	0	101
CRW_00641	-	0.00	0.00	0.00	0	39903	0	0	0	0	76
CRW_00642	-	0.28	0.08	1.00	5	47273	0	0	0	0	60
CRW_00643	-	0.57	0.33	0.98	40	123215	1	1	0	0	82
CRW_00645	-	0.49	0.24	1.00	16	35495	0	0	0	0	51
CRW_00646	-	0.32	0.13	0.80	8	34970	2	0	2	0	56
CRW_00650	-	0.68	0.49	0.96	69	112978	5	1	2	2	73
CRW_00651	-	0.50	0.26	0.94	32	100094	2	1	1	0	89
CRW_00653	-	0.76	0.60	0.95	81	94745	7	1	3	3	53
CRW_00654	-	0.76	0.60	0.95	75	78131	6	1	3	2	49
CRW_00655	-	0.78	0.63	0.98	78	89173	4	1	1	2	46
CRW_00656	-	0.66	0.45	0.98	58	90466	3	1	0	2	71
CRW_00657	-	0.56	0.34	0.94	46	105981	3	0	3	0	90
CRW_00658	-	0.64	0.44	0.94	45	74643	3	0	3	0	57
CRW_00659	-	0.38	0.38	0.39	23	32326	39	11	25	3	38
CRW_00660	-	0.42	0.28	0.63	17	22128	10	2	8	0	43
CRW_00661	-	0.12	0.08	0.20	4	24290	18	4	12	2	47
CRW_00662	-	0.33	0.29	0.37	19	28628	40	3	30	7	46
CRW_00663	-	0.24	0.18	0.32	11	26072	23	1	22	0	50
CRW_00664	-	0.28	0.22	0.35	17	53580	34	2	29	3	61
CRW_00665	-	0.00	0.00	0.00	0	23634	19	2	17	0	48
CRW_00666	-	0.62	0.40	0.94	51	96087	3	1	2	0	75
CRW_00669	-	0.65	0.46	0.92	55	97401	5	1	4	0	64
CRW_00670	Intron_gpI links to Rfam database...	0.69	0.50	0.95	60	70062	3	0	3	0	60
CRW_00671	Intron_gpI links to Rfam database...	0.66	0.48	0.92	56	62774	5	1	4	0	61
CRW_00672	Intron_gpI links to Rfam database...	0.69	0.50	0.96	55	72333	3	0	2	1	56
CRW_00673	-	0.77	0.63	0.94	66	100058	4	1	3	0	39
CRW_00674	Intron_gpI links to Rfam database...	0.76	0.57	1.00	71	83365	1	0	0	1	53
CRW_00676	Intron_gpI links to Rfam database...	0.73	0.55	0.98	63	93464	3	0	1	2	52
CRW_00677	-	0.63	0.46	0.87	48	71955	8	1	6	1	57
CRW_00679	-	0.64	0.45	0.92	48	76584	4	0	4	0	59
CRW_00681	-	0.58	0.38	0.89	42	113003	8	0	5	3	70
CRW_00686	-	0.50	0.26	0.94	33	95231	2	1	1	0	92
CRW_00687	-	0.63	0.52	0.77	34	28636	10	5	5	0	32
CRW_00688	-	0.84	0.81	0.87	46	21892	8	2	5	1	11
CRW_00689	-	0.62	0.57	0.68	44	33605	22	5	16	1	33
CRW_00690	-	0.70	0.57	0.87	39	33366	10	2	4	4	30
CRW_00691	-	0.66	0.48	0.91	32	27226	4	1	2	1	35
CRW_00692	Intron_gpI links to Rfam database...	0.82	0.70	0.95	63	68569	3	0	3	0	27
CRW_00693	-	0.68	0.50	0.92	61	89187	6	1	4	1	61
CRW_00694	-	0.73	0.56	0.94	68	85833	5	1	3	1	54
CRW_00699	-	0.63	0.44	0.92	55	91746	6	0	5	1	71
CRW_00703	-	0.00	0.00	0.00	0	40470	0	0	0	0	66
CRW_00715	-	0.55	0.30	1.00	31	69347	0	0	0	0	73
CRW_00721	-	0.54	0.29	1.00	20	58633	0	0	0	0	48
PDB_00078	-	0.68	0.56	0.83	64	49693	13	4	9	0	51
PDB_00079	-	0.50	0.25	1.00	36	121735	10	0	0	10	106
PDB_00278	-	0.43	0.21	0.88	15	24959	2	0	2	0	57
PDB_00398	-	0.00	0.00	0.00	0	72010	0	0	0	0	103
PDB_00403	-	0.36	0.13	1.00	20	124730	2	0	0	2	133
PDB_00423	-	0.35	0.12	1.00	9	26787	0	0	0	0	65
PDB_00528	-	0.00	0.00	0.00	0	46056	0	0	0	0	103
PDB_00555	-	0.49	0.44	0.54	39	25353	34	0	33	1	49
PDB_00601	-	0.57	0.35	0.90	28	36284	3	0	3	0	51
PDB_00701	-	0.34	0.15	0.80	16	45431	5	0	4	1	93
PDB_00739	-	0.35	0.12	1.00	8	25870	0	0	0	0	59
PDB_00747	-	0.72	0.51	1.00	41	24490	0	0	0	0	39
PDB_00827	Intron_gpI links to Rfam database...	0.73	0.54	0.98	44	26983	2	0	1	1	37
PDB_00917	-	0.54	0.31	0.97	29	35215	5	0	1	4	66
PDB_00919	RNaseP_bact_a links to Rfam database...	0.62	0.40	0.95	41	44210	2	0	2	0	62
PDB_00985	-	0.12	0.06	0.24	4	30611	14	0	13	1	60
PDB_01076	-	0.36	0.14	0.92	11	23424	2	0	1	1	68
PDB_01129	-	0.41	0.35	0.49	25	35460	31	15	11	5	46
PDB_01144	-	0.29	0.09	1.00	11	83017	1	0	0	1	116
PDB_01157	-	0.00	0.00	0.00	0	50086	0	0	0	0	98
PDB_01161	-	0.28	0.08	1.00	6	36850	0	0	0	0	69
PDB_01193	-	0.26	0.07	1.00	10	106020	0	0	0	0	141
RFA_00597	Telomerase-vert links to Rfam database...	0.50	0.25	1.00	27	97876	3	0	0	3	82
RFA_00598	Telomerase-vert links to Rfam database...	0.58	0.34	1.00	34	84632	5	0	0	5	67
RFA_00599	Telomerase-vert links to Rfam database...	0.65	0.46	0.91	51	101419	10	3	2	5	60
RFA_00600	Telomerase-vert links to Rfam database...	0.51	0.29	0.91	29	120263	7	0	3	4	71
RFA_00601	Telomerase-vert links to Rfam database...	0.86	0.82	0.91	93	99133	20	3	6	11	21
RFA_00602	Telomerase-vert links to Rfam database...	0.85	0.80	0.90	93	101372	20	3	7	10	23
RFA_00606	Telomerase-cil links to Rfam database...	0.72	0.69	0.75	27	21285	17	7	2	8	12
RFA_00616	-	0.28	0.23	0.35	9	22979	24	3	14	7	30
RFA_00618	-	0.27	0.21	0.35	8	22982	22	3	12	7	31
RFA_00619	-	0.29	0.23	0.36	9	22766	23	3	13	7	30
RFA_00620	Telomerase-cil links to Rfam database...	0.23	0.15	0.35	6	21928	16	1	10	5	33
RFA_00621	RNase_MRP links to Rfam database...	0.53	0.50	0.56	38	46292	40	1	29	10	38
RFA_00623	RNase_MRP links to Rfam database...	0.53	0.50	0.57	39	43887	40	1	29	10	39
RFA_00624	RNase_MRP links to Rfam database...	0.40	0.16	1.00	10	30125	0	0	0	0	51
RFA_00626	rne5 links to Rfam database...	0.85	0.79	0.92	69	56541	13	1	5	7	18
RFA_00627	rne5 links to Rfam database...	0.86	0.75	0.98	65	56887	13	0	1	12	22
RFA_00628	rne5 links to Rfam database...	0.86	0.78	0.94	67	57220	7	1	3	3	19
RFA_00630	rne5 links to Rfam database...	0.87	0.83	0.92	72	56875	10	1	5	4	15
RFA_00639	7SK links to Rfam database...	0.51	0.46	0.56	40	54544	38	3	28	7	47
RFA_00814	R2_retro_el links to Rfam database...	0.96	0.93	1.00	38	25162	6	0	0	6	3
RFA_00815	R2_retro_el links to Rfam database...	0.92	0.85	1.00	35	24496	1	0	0	1	6
RFA_00816	R2_retro_el links to Rfam database...	0.80	0.63	1.00	26	23194	1	0	0	1	15
RFA_00817	R2_retro_el links to Rfam database...	0.68	0.59	0.80	24	21915	9	2	4	3	17
RFA_00818	R2_retro_el links to Rfam database...	0.57	0.54	0.61	22	20265	18	8	6	4	19
RFA_00819	R2_retro_el links to Rfam database...	0.95	0.93	0.97	38	27927	15	0	1	14	3
SRP_00002	Metazoa_SRP links to Rfam database...	0.95	0.91	0.99	93	45056	3	0	1	2	9
SRP_00003	-	0.65	0.44	0.95	42	46012	3	0	2	1	54
SRP_00006	Metazoa_SRP links to Rfam database...	0.96	0.92	1.00	93	45660	2	0	0	2	8
SRP_00009	Plant_SRP links to Rfam database...	0.85	0.77	0.93	79	46580	8	0	6	2	23
SRP_00011	Plant_SRP links to Rfam database...	0.81	0.77	0.86	80	46267	13	0	13	0	24
SRP_00012	Plant_SRP links to Rfam database...	0.92	0.86	0.99	87	46272	2	0	1	1	14
SRP_00015	Plant_SRP links to Rfam database...	0.92	0.86	0.99	85	46274	2	0	1	1	14
SRP_00016	Archaea_SRP links to Rfam database...	0.67	0.47	0.96	51	47842	3	0	2	1	58
SRP_00018	Fungi_SRP links to Rfam database...	0.63	0.57	0.70	46	38437	27	6	14	7	35
SRP_00019	Fungi_SRP links to Rfam database...	0.42	0.32	0.56	29	35994	24	6	17	1	62
SRP_00023	-	0.00	0.00	0.00	0	20877	33	10	23	0	35
SRP_00024	Bacteria_large_SRP links to Rfam database...	0.56	0.34	0.91	30	37642	3	0	3	0	57
SRP_00026	Bacteria_large_SRP links to Rfam database...	0.56	0.34	0.91	30	36823	3	0	3	0	58
SRP_00027	Bacteria_large_SRP links to Rfam database...	0.56	0.34	0.91	30	37095	3	0	3	0	57
SRP_00030	Bacteria_large_SRP links to Rfam database...	0.57	0.35	0.91	31	36822	3	0	3	0	57
SRP_00031	Bacteria_large_SRP links to Rfam database...	0.55	0.34	0.91	30	36282	3	0	3	0	59
SRP_00037	Bacteria_large_SRP links to Rfam database...	0.57	0.36	0.91	31	36551	3	0	3	0	56
SRP_00050	Metazoa_SRP links to Rfam database...	0.97	0.96	0.99	95	44754	5	0	1	4	4
SRP_00053	Metazoa_SRP links to Rfam database...	0.90	0.87	0.92	82	45061	16	0	7	9	12
SRP_00060	Metazoa_SRP links to Rfam database...	0.95	0.94	0.97	94	44454	8	0	3	5	6
SRP_00061	Metazoa_SRP links to Rfam database...	0.95	0.93	0.97	93	44754	9	0	3	6	7
SRP_00066	Metazoa_SRP links to Rfam database...	0.82	0.76	0.89	76	45366	11	0	9	2	24
SRP_00069	Fungi_SRP links to Rfam database...	0.50	0.34	0.73	29	34413	13	1	10	2	56
SRP_00073	Fungi_SRP links to Rfam database...	0.67	0.63	0.70	45	38996	34	4	15	15	26
SRP_00076	-	0.42	0.18	1.00	7	25418	0	0	0	0	32
SRP_00079	Plant_SRP links to Rfam database...	0.73	0.67	0.79	59	41830	21	3	13	5	29
SRP_00085	Plant_SRP links to Rfam database...	0.88	0.78	0.99	79	45371	3	0	1	2	22
SRP_00086	Metazoa_SRP links to Rfam database...	0.93	0.93	0.94	93	44154	10	0	6	4	7
SRP_00087	Fungi_SRP links to Rfam database...	0.16	0.17	0.16	10	37338	59	18	35	6	48
SRP_00088	Bacteria_large_SRP links to Rfam database...	0.56	0.35	0.91	31	34157	3	0	3	0	58
SRP_00089	Bacteria_large_SRP links to Rfam database...	0.55	0.33	0.91	30	35745	3	0	3	0	60
SRP_00090	Bacteria_large_SRP links to Rfam database...	0.56	0.34	0.91	31	35477	3	0	3	0	59
SRP_00091	Fungi_SRP links to Rfam database...	0.71	0.68	0.73	65	52886	26	4	20	2	30
SRP_00099	Plant_SRP links to Rfam database...	0.65	0.55	0.78	52	44783	16	3	12	1	43
SRP_00102	Metazoa_SRP links to Rfam database...	0.82	0.79	0.85	80	44457	17	5	9	3	21
SRP_00103	Metazoa_SRP links to Rfam database...	0.85	0.81	0.89	83	45358	12	1	9	2	19
SRP_00104	Fungi_SRP links to Rfam database...	0.36	0.36	0.35	25	34382	49	5	41	3	44
SRP_00108	-	0.40	0.34	0.48	24	38453	32	4	22	6	46
SRP_00117	Metazoa_SRP links to Rfam database...	0.96	0.92	1.00	94	45357	2	0	0	2	8
SRP_00118	-	0.47	0.22	1.00	21	39319	0	0	0	0	74
SRP_00120	-	0.46	0.28	0.75	24	37369	8	2	6	0	62
SRP_00123	Metazoa_SRP links to Rfam database...	0.73	0.56	0.94	51	36531	3	0	3	0	40
SRP_00124	Metazoa_SRP links to Rfam database...	0.39	0.18	0.88	15	37111	2	0	2	0	70
SRP_00125	-	0.60	0.37	0.98	40	50362	1	0	1	0	67
SRP_00127	Fungi_SRP links to Rfam database...	0.73	0.71	0.76	84	72280	27	5	21	1	35
SRP_00130	Archaea_SRP links to Rfam database...	0.57	0.38	0.86	37	49727	7	0	6	1	60
SRP_00136	Fungi_SRP links to Rfam database...	0.39	0.37	0.41	26	44190	43	11	26	6	45
SRP_00142	Archaea_SRP links to Rfam database...	0.80	0.73	0.87	68	45978	12	0	10	2	25
SRP_00143	Archaea_SRP links to Rfam database...	0.83	0.75	0.93	76	49688	10	0	6	4	25
SRP_00144	Archaea_SRP links to Rfam database...	0.86	0.79	0.94	74	46586	8	0	5	3	20
SRP_00148	Fungi_SRP links to Rfam database...	0.47	0.43	0.52	37	50015	44	2	32	10	50
SRP_00152	Plant_SRP links to Rfam database...	0.93	0.89	0.98	92	45659	3	0	2	1	11
SRP_00153	Plant_SRP links to Rfam database...	0.89	0.83	0.95	89	46877	6	0	5	1	18
SRP_00157	Fungi_SRP links to Rfam database...	0.32	0.32	0.32	23	44182	54	14	34	6	49
SRP_00158	Fungi_SRP links to Rfam database...	0.34	0.35	0.33	40	124131	85	33	47	5	75
SRP_00160	Fungi_SRP links to Rfam database...	0.38	0.28	0.51	37	86248	35	0	35	0	93
SRP_00167	-	0.89	0.88	0.90	74	38699	14	3	5	6	10
SRP_00168	-	0.77	0.70	0.84	64	38705	12	2	10	0	27
SRP_00171	Metazoa_SRP links to Rfam database...	0.56	0.45	0.69	40	45393	18	1	17	0	48
SRP_00172	-	0.69	0.51	0.94	46	39011	6	0	3	3	45
SRP_00173	Bacteria_large_SRP links to Rfam database...	0.54	0.32	0.91	29	38194	3	0	3	0	61
SRP_00174	Bacteria_large_SRP links to Rfam database...	0.56	0.35	0.91	30	38748	3	0	3	0	56
SRP_00175	Fungi_SRP links to Rfam database...	0.32	0.23	0.46	19	44510	27	3	19	5	65
SRP_00178	Plant_SRP links to Rfam database...	0.88	0.81	0.95	83	45666	6	0	4	2	19
SRP_00179	Plant_SRP links to Rfam database...	0.89	0.81	0.98	85	45969	6	0	2	4	20
SRP_00180	-	0.85	0.72	1.00	39	22539	1	0	0	1	15
SRP_00181	Plant_SRP links to Rfam database...	0.80	0.73	0.88	74	45972	12	0	10	2	28
SRP_00182	Plant_SRP links to Rfam database...	0.83	0.75	0.93	76	45974	8	0	6	2	25
SRP_00184	Plant_SRP links to Rfam database...	0.78	0.70	0.86	70	45975	15	0	11	4	30
SRP_00188	Plant_SRP links to Rfam database...	0.84	0.76	0.94	60	31061	6	0	4	2	19
SRP_00197	Archaea_SRP links to Rfam database...	0.70	0.51	0.96	52	49401	2	0	2	0	49
SRP_00198	Archaea_SRP links to Rfam database...	0.72	0.54	0.97	56	50982	2	0	2	0	47
SRP_00199	Archaea_SRP links to Rfam database...	0.68	0.50	0.95	52	50985	3	0	3	0	53
SRP_00201	Archaea_SRP links to Rfam database...	0.71	0.52	0.97	58	47835	3	0	2	1	53
SRP_00202	Archaea_SRP links to Rfam database...	0.77	0.62	0.95	73	54208	6	0	4	2	44
SRP_00203	Archaea_SRP links to Rfam database...	0.71	0.61	0.83	64	48751	18	0	13	5	41
SRP_00204	Archaea_SRP links to Rfam database...	0.73	0.59	0.91	60	49075	7	0	6	1	42
SRP_00206	Archaea_SRP links to Rfam database...	0.79	0.65	0.97	70	47823	3	0	2	1	38
SRP_00208	Archaea_SRP links to Rfam database...	0.81	0.66	0.99	67	46597	2	0	1	1	34
SRP_00228	Metazoa_SRP links to Rfam database...	0.95	0.93	0.98	88	45361	8	0	2	6	7
SRP_00230	Fungi_SRP links to Rfam database...	0.68	0.58	0.81	52	39557	14	0	12	2	38
SRP_00234	Bacteria_large_SRP links to Rfam database...	0.55	0.34	0.91	29	36283	3	0	3	0	57
SRP_00239	Plant_SRP links to Rfam database...	0.54	0.45	0.64	42	50337	25	2	22	1	51
SRP_00240	Plant_SRP links to Rfam database...	0.83	0.75	0.93	76	48123	8	0	6	2	26
SRP_00241	Plant_SRP links to Rfam database...	0.65	0.51	0.82	42	46005	10	0	9	1	40
SRP_00246	-	0.42	0.42	0.42	31	40968	47	6	36	5	43
SRP_00247	Metazoa_SRP links to Rfam database...	0.59	0.57	0.62	50	47197	34	4	27	3	37
SRP_00252	Metazoa_SRP links to Rfam database...	0.56	0.52	0.61	46	49066	31	5	24	2	43
SRP_00253	Metazoa_SRP links to Rfam database...	0.63	0.63	0.63	57	49364	39	6	28	5	33
SRP_00254	Fungi_SRP links to Rfam database...	0.44	0.39	0.49	24	32336	30	7	18	5	37
SRP_00255	Archaea_SRP links to Rfam database...	0.55	0.31	0.97	29	47556	3	0	1	2	65
SRP_00257	Metazoa_SRP links to Rfam database...	0.83	0.74	0.93	80	50954	8	3	3	2	28
SRP_00260	Metazoa_SRP links to Rfam database...	0.76	0.74	0.78	74	47800	23	4	17	2	26
SRP_00261	-	0.88	0.84	0.94	87	45358	8	0	6	2	17
SRP_00262	-	0.67	0.63	0.71	64	48426	26	4	22	0	37
SRP_00263	-	0.82	0.79	0.85	82	48420	14	7	7	0	22
SRP_00265	Fungi_SRP links to Rfam database...	0.45	0.38	0.54	28	41276	34	7	17	10	45
SRP_00267	Metazoa_SRP links to Rfam database...	0.94	0.93	0.96	89	44458	8	0	4	4	7
SRP_00276	Archaea_SRP links to Rfam database...	0.82	0.69	0.97	76	50643	3	0	2	1	34
SRP_00278	Archaea_SRP links to Rfam database...	0.57	0.34	0.95	36	46018	3	0	2	1	69
SRP_00282	Metazoa_SRP links to Rfam database...	0.34	0.40	0.29	25	43278	70	20	42	8	38
SRP_00290	Fungi_SRP links to Rfam database...	0.63	0.58	0.68	78	100462	39	2	34	3	57
SRP_00299	Metazoa_SRP links to Rfam database...	0.91	0.83	1.00	82	44171	3	0	0	3	17
SRP_00300	Metazoa_SRP links to Rfam database...	0.96	0.93	0.99	87	44165	4	0	1	3	7
SRP_00301	Fungi_SRP links to Rfam database...	0.64	0.57	0.72	49	32572	23	2	17	4	37
SRP_00302	Fungi_SRP links to Rfam database...	0.33	0.26	0.42	21	41566	34	3	26	5	60
SRP_00308	Bacteria_large_SRP links to Rfam database...	0.56	0.34	0.91	30	36282	3	0	3	0	58
SRP_00317	Metazoa_SRP links to Rfam database...	0.94	0.91	0.97	89	45058	10	0	3	7	9
SRP_00321	Archaea_SRP links to Rfam database...	0.70	0.52	0.93	56	47526	5	0	4	1	52
SRP_00322	Archaea_SRP links to Rfam database...	0.87	0.82	0.94	89	48421	7	0	6	1	20
SRP_00323	Archaea_SRP links to Rfam database...	0.88	0.83	0.93	89	47182	10	0	7	3	18
SRP_00328	Metazoa_SRP links to Rfam database...	0.67	0.66	0.69	56	39540	29	7	18	4	29
SRP_00329	Metazoa_SRP links to Rfam database...	0.64	0.61	0.68	52	39826	28	4	21	3	33
SRP_00330	Archaea_SRP links to Rfam database...	0.78	0.65	0.94	62	50020	6	0	4	2	33
SRP_00331	Metazoa_SRP links to Rfam database...	0.60	0.53	0.69	46	37608	21	1	20	0	41
SRP_00332	Archaea_SRP links to Rfam database...	0.85	0.75	0.96	79	50321	4	0	3	1	27
SRP_00335	Bacteria_large_SRP links to Rfam database...	0.51	0.44	0.59	17	35216	17	7	5	5	22
SRP_00336	-	0.36	0.35	0.37	27	38987	47	8	38	1	50
SRP_00337	Bacteria_large_SRP links to Rfam database...	0.55	0.33	0.91	30	35478	4	0	3	1	61
SRP_00339	Archaea_SRP links to Rfam database...	0.86	0.84	0.89	79	44462	13	0	10	3	15
SRP_00340	Metazoa_SRP links to Rfam database...	0.61	0.39	0.97	32	41295	1	0	1	0	50
SRP_00345	-	0.83	0.71	0.97	37	20668	1	0	1	0	15
SRP_00347	Metazoa_SRP links to Rfam database...	0.94	0.92	0.97	88	46574	8	0	3	5	8
SRP_00348	-	0.60	0.51	0.70	50	46900	21	3	18	0	48
SRP_00353	-	0.85	0.75	0.97	75	37873	2	0	2	0	25
SRP_00354	-	0.82	0.73	0.92	68	38707	7	0	6	1	25
SRP_00355	-	0.92	0.84	1.00	81	41824	5	0	0	5	15
SRP_00361	Plant_SRP links to Rfam database...	0.82	0.81	0.82	73	41816	24	2	14	8	17
SRP_00368	Metazoa_SRP links to Rfam database...	0.91	0.89	0.94	87	43863	9	0	6	3	11
SRP_00371	Fungi_SRP links to Rfam database...	0.68	0.60	0.77	49	36251	16	2	13	1	33
TMR_00007	tmRNA links to Rfam database...	0.56	0.31	1.00	34	61742	0	0	0	0	74
TMR_00008	tmRNA links to Rfam database...	0.54	0.29	1.00	31	66035	5	0	0	5	75
TMR_00010	tmRNA links to Rfam database...	0.36	0.30	0.43	29	57902	44	6	33	5	67
TMR_00012	tmRNA links to Rfam database...	0.59	0.42	0.83	34	64579	19	3	4	12	47
TMR_00014	tmRNA links to Rfam database...	0.83	0.71	0.98	78	68555	7	1	1	5	32
TMR_00017	tmRNA links to Rfam database...	0.72	0.55	0.93	56	67101	8	0	4	4	46
TMR_00018	tmRNA links to Rfam database...	0.71	0.60	0.85	55	64555	14	2	8	4	37
TMR_00028	tmRNA links to Rfam database...	0.64	0.48	0.85	47	62780	9	2	6	1	50
TMR_00030	tmRNA links to Rfam database...	0.63	0.50	0.80	56	75785	17	2	12	3	55
TMR_00034	tmRNA links to Rfam database...	0.74	0.64	0.86	70	59950	15	1	10	4	40
TMR_00035	tmRNA links to Rfam database...	0.74	0.68	0.81	67	67813	22	7	9	6	31
TMR_00036	tmRNA links to Rfam database...	0.66	0.44	1.00	44	90481	5	0	0	5	57
TMR_00038	tmRNA links to Rfam database...	0.67	0.49	0.92	54	71194	7	3	2	2	56
TMR_00042	tmRNA links to Rfam database...	0.74	0.64	0.85	63	62761	15	1	10	4	35
TMR_00046	tmRNA links to Rfam database...	0.64	0.53	0.77	51	62769	20	3	12	5	45
TMR_00047	tmRNA links to Rfam database...	0.56	0.32	1.00	18	48498	0	0	0	0	39
TMR_00048	tmRNA links to Rfam database...	0.73	0.63	0.85	60	64909	18	2	9	7	35
TMR_00049	tmRNA links to Rfam database...	0.66	0.57	0.77	50	63125	20	3	12	5	37
TMR_00051	tmRNA links to Rfam database...	0.77	0.62	0.97	58	65643	7	0	2	5	36
TMR_00055	tmRNA links to Rfam database...	0.64	0.53	0.77	60	78925	19	4	14	1	54
TMR_00057	tmRNA links to Rfam database...	0.45	0.20	1.00	16	73904	0	0	0	0	63
TMR_00061	tmRNA links to Rfam database...	0.48	0.24	0.96	24	59660	1	0	1	0	75
TMR_00062	tmRNA links to Rfam database...	0.61	0.49	0.75	51	78538	23	3	14	6	53
TMR_00064	tmRNA links to Rfam database...	0.45	0.21	0.96	22	77005	1	0	1	0	81
TMR_00065	tmRNA links to Rfam database...	0.50	0.25	0.96	27	76608	1	0	1	0	79
TMR_00067	tmRNA links to Rfam database...	0.77	0.60	0.99	68	82146	3	1	0	2	46
TMR_00073	tmRNA links to Rfam database...	0.63	0.49	0.81	57	65633	14	4	9	1	60
TMR_00076	tmRNA links to Rfam database...	0.71	0.60	0.83	60	70804	17	4	8	5	40
TMR_00080	tmRNA links to Rfam database...	0.60	0.36	0.97	35	70464	1	0	1	0	61
TMR_00081	tmRNA links to Rfam database...	0.49	0.25	0.96	26	67134	2	0	1	1	80
TMR_00082	tmRNA links to Rfam database...	0.65	0.44	0.95	42	67852	3	0	2	1	54
TMR_00083	tmRNA links to Rfam database...	0.78	0.68	0.91	71	68187	14	3	4	7	34
TMR_00092	tmRNA links to Rfam database...	0.62	0.47	0.82	47	67471	11	2	8	1	54
TMR_00093	tmRNA links to Rfam database...	0.49	0.30	0.79	31	64222	9	6	2	1	71
TMR_00096	tmRNA links to Rfam database...	0.55	0.44	0.70	44	64917	20	9	10	1	56
TMR_00101	tmRNA links to Rfam database...	0.51	0.32	0.83	34	64220	9	5	2	2	73
TMR_00102	tmRNA links to Rfam database...	0.47	0.29	0.76	29	64223	10	6	3	1	72
TMR_00103	tmRNA links to Rfam database...	0.65	0.51	0.82	55	64194	13	3	9	1	53
TMR_00104	-	0.61	0.44	0.84	31	66758	6	5	1	0	39
TMR_00106	tmRNA links to Rfam database...	0.65	0.48	0.88	58	90034	12	3	5	4	62
TMR_00109	tmRNA links to Rfam database...	0.59	0.35	1.00	43	88367	4	0	0	4	79
TMR_00111	tmRNA links to Rfam database...	0.64	0.52	0.79	64	90444	21	2	15	4	58
TMR_00116	tmRNA links to Rfam database...	0.70	0.49	1.00	51	64929	2	0	0	2	53
TMR_00117	tmRNA links to Rfam database...	0.69	0.49	0.97	58	80140	10	0	2	8	60
TMR_00118	tmRNA links to Rfam database...	0.72	0.54	0.97	65	81339	10	0	2	8	55
TMR_00119	tmRNA links to Rfam database...	0.62	0.38	1.00	40	71970	1	0	0	1	64
TMR_00123	tmRNA links to Rfam database...	0.69	0.55	0.86	56	66365	14	0	9	5	45
TMR_00124	tmRNA links to Rfam database...	0.74	0.63	0.86	62	70428	10	5	5	0	36
TMR_00125	tmRNA links to Rfam database...	0.64	0.49	0.83	49	64202	11	5	5	1	50
TMR_00127	tmRNA links to Rfam database...	0.73	0.61	0.88	59	62768	14	1	7	6	38
TMR_00128	tmRNA links to Rfam database...	0.61	0.45	0.84	43	61024	10	4	4	2	53
TMR_00131	tmRNA links to Rfam database...	0.70	0.57	0.86	56	64915	15	1	8	6	43
TMR_00135	tmRNA links to Rfam database...	0.74	0.62	0.88	61	62766	14	1	7	6	38
TMR_00136	tmRNA links to Rfam database...	0.39	0.19	0.79	19	74667	5	1	4	0	82
TMR_00137	tmRNA links to Rfam database...	0.47	0.28	0.78	25	61043	12	1	6	5	64
TMR_00139	tmRNA links to Rfam database...	0.61	0.37	1.00	34	62094	1	0	0	1	57
TMR_00140	tmRNA links to Rfam database...	0.72	0.64	0.81	64	73841	30	3	12	15	36
TMR_00142	tmRNA links to Rfam database...	0.61	0.55	0.68	56	70794	33	7	19	7	46
TMR_00143	tmRNA links to Rfam database...	0.39	0.16	1.00	16	64604	6	0	0	6	87
TMR_00144	tmRNA links to Rfam database...	0.61	0.46	0.81	47	74247	16	1	10	5	56
TMR_00146	tmRNA links to Rfam database...	0.62	0.38	1.00	16	32115	0	0	0	0	26
TMR_00148	tmRNA links to Rfam database...	0.91	0.88	0.94	15	27714	1	0	1	0	2
TMR_00150	tmRNA links to Rfam database...	0.62	0.38	1.00	16	43055	0	0	0	0	26
TMR_00152	tmRNA links to Rfam database...	0.35	0.12	1.00	14	81392	4	0	0	4	101
TMR_00155	tmRNA links to Rfam database...	0.70	0.49	1.00	51	61725	4	0	0	4	53
TMR_00156	tmRNA links to Rfam database...	0.55	0.33	0.91	32	60343	5	0	3	2	65
TMR_00158	tmRNA links to Rfam database...	0.57	0.32	1.00	32	60694	1	0	0	1	67
TMR_00159	tmRNA links to Rfam database...	0.64	0.41	1.00	38	62090	3	0	0	3	54
TMR_00160	tmRNA links to Rfam database...	0.62	0.38	1.00	36	64584	9	0	0	9	59
TMR_00164	tmRNA links to Rfam database...	0.53	0.28	1.00	30	66765	7	0	0	7	76
TMR_00165	tmRNA links to Rfam database...	0.69	0.47	1.00	46	61730	8	0	0	8	51
TMR_00166	tmRNA links to Rfam database...	0.46	0.28	0.78	28	61740	14	2	6	6	73
TMR_00168	tmRNA links to Rfam database...	0.56	0.32	1.00	36	61039	1	0	0	1	78
TMR_00173	tmRNA links to Rfam database...	0.58	0.33	1.00	14	42181	0	0	0	0	28
TMR_00179	tmRNA links to Rfam database...	0.80	0.73	0.88	72	67079	21	3	7	11	26
TMR_00180	tmRNA links to Rfam database...	0.79	0.71	0.89	70	67082	21	3	6	12	29
TMR_00182	tmRNA links to Rfam database...	0.44	0.21	0.95	21	66408	2	0	1	1	81
TMR_00183	tmRNA links to Rfam database...	0.57	0.34	0.95	35	63153	6	1	1	4	68
TMR_00184	tmRNA links to Rfam database...	0.43	0.19	1.00	19	63171	4	0	0	4	83
TMR_00193	tmRNA links to Rfam database...	0.56	0.49	0.65	39	59280	30	6	15	9	41
TMR_00194	tmRNA links to Rfam database...	0.72	0.61	0.84	57	62767	20	2	9	9	36
TMR_00196	tmRNA links to Rfam database...	0.70	0.59	0.84	57	61007	17	6	5	6	40
TMR_00199	tmRNA links to Rfam database...	0.42	0.32	0.57	29	62784	29	7	15	7	63
TMR_00200	-	0.70	0.52	0.95	39	41575	12	0	2	10	36
TMR_00204	tmRNA links to Rfam database...	0.46	0.41	0.52	40	60301	44	12	25	7	57
TMR_00207	tmRNA links to Rfam database...	0.76	0.60	0.95	62	72325	7	0	3	4	41
TMR_00223	tmRNA links to Rfam database...	0.70	0.53	0.94	50	64208	6	1	2	3	45
TMR_00224	tmRNA links to Rfam database...	0.41	0.20	0.83	20	64956	4	0	4	0	81
TMR_00226	tmRNA links to Rfam database...	0.74	0.62	0.89	65	69678	8	1	7	0	40
TMR_00227	tmRNA links to Rfam database...	0.74	0.61	0.90	62	70056	7	1	6	0	39
TMR_00228	tmRNA links to Rfam database...	0.49	0.24	1.00	26	88384	1	0	0	1	82
TMR_00234	tmRNA links to Rfam database...	0.73	0.56	0.97	57	58937	3	0	2	1	45
TMR_00238	tmRNA links to Rfam database...	0.49	0.25	0.96	25	84640	2	1	0	1	76
TMR_00239	tmRNA links to Rfam database...	0.73	0.64	0.84	61	61703	14	2	10	2	35
TMR_00240	tmRNA links to Rfam database...	0.60	0.40	0.89	34	63152	7	1	3	3	51
TMR_00246	-	0.69	0.47	1.00	16	78194	0	0	0	0	18
TMR_00248	tmRNA links to Rfam database...	0.63	0.39	1.00	15	54270	0	0	0	0	23
TMR_00257	tmRNA links to Rfam database...	0.71	0.54	0.93	53	67104	10	0	4	6	45
TMR_00259	tmRNA links to Rfam database...	0.38	0.22	0.64	23	67860	13	5	8	0	80
TMR_00261	tmRNA links to Rfam database...	0.49	0.34	0.72	34	66748	14	5	8	1	67
TMR_00262	tmRNA links to Rfam database...	0.56	0.53	0.59	55	74212	38	12	26	0	49
TMR_00271	tmRNA links to Rfam database...	0.54	0.35	0.82	32	64222	15	3	4	8	59
TMR_00274	tmRNA links to Rfam database...	0.80	0.70	0.91	74	66714	15	3	4	8	31
TMR_00278	tmRNA links to Rfam database...	0.72	0.61	0.85	62	67823	22	0	11	11	40
TMR_00279	tmRNA links to Rfam database...	0.76	0.66	0.87	62	68935	21	4	5	12	32
TMR_00280	tmRNA links to Rfam database...	0.73	0.62	0.85	63	65992	17	2	9	6	38
TMR_00283	tmRNA links to Rfam database...	0.71	0.56	0.89	54	65280	15	0	7	8	42
TMR_00289	tmRNA links to Rfam database...	0.66	0.55	0.79	54	67093	25	0	14	11	44
TMR_00290	tmRNA links to Rfam database...	0.61	0.38	0.97	35	64225	9	0	1	8	57
TMR_00296	tmRNA links to Rfam database...	0.80	0.69	0.92	68	68932	17	3	3	11	30
TMR_00298	tmRNA links to Rfam database...	0.66	0.58	0.75	59	68186	29	2	18	9	42
TMR_00300	tmRNA links to Rfam database...	0.53	0.29	1.00	32	70468	7	0	0	7	80
TMR_00301	tmRNA links to Rfam database...	0.42	0.18	1.00	17	82198	0	0	0	0	79
TMR_00302	tmRNA links to Rfam database...	0.81	0.68	0.96	64	77354	10	1	2	7	30
TMR_00305	tmRNA links to Rfam database...	0.44	0.20	1.00	20	61055	0	0	0	0	82
TMR_00306	tmRNA links to Rfam database...	0.55	0.31	0.97	33	64227	3	0	1	2	73
TMR_00310	tmRNA links to Rfam database...	0.64	0.46	0.90	45	63853	11	2	3	6	53
TMR_00317	tmRNA links to Rfam database...	0.69	0.64	0.76	65	68179	26	4	17	5	37
TMR_00331	tmRNA links to Rfam database...	0.43	0.18	1.00	15	66780	1	0	0	1	67
TMR_00332	tmRNA links to Rfam database...	0.75	0.62	0.92	61	67095	10	0	5	5	38
TMR_00334	tmRNA links to Rfam database...	0.51	0.30	0.88	30	66761	8	2	2	4	71
TMR_00337	tmRNA links to Rfam database...	0.45	0.21	0.96	25	83002	1	0	1	0	94
TMR_00340	tmRNA links to Rfam database...	0.55	0.37	0.81	30	64224	12	1	6	5	51
TMR_00341	tmRNA links to Rfam database...	0.47	0.28	0.79	26	63157	13	4	3	6	66
TMR_00343	tmRNA links to Rfam database...	0.81	0.71	0.93	75	64899	14	2	4	8	30
TMR_00345	tmRNA links to Rfam database...	0.61	0.38	1.00	39	63864	0	0	0	0	65
TMR_00346	tmRNA links to Rfam database...	0.58	0.39	0.86	37	64218	11	2	4	5	57
TMR_00348	tmRNA links to Rfam database...	0.38	0.14	1.00	14	77407	0	0	0	0	85
TMR_00352	tmRNA links to Rfam database...	0.42	0.29	0.61	22	95230	36	3	11	22	53
TMR_00353	tmRNA links to Rfam database...	0.50	0.25	1.00	26	84229	0	0	0	0	79
TMR_00357	tmRNA links to Rfam database...	0.44	0.23	0.84	21	83003	4	0	4	0	71
TMR_00358	tmRNA links to Rfam database...	0.62	0.42	0.91	42	75032	4	0	4	0	57
TMR_00361	-	0.37	0.35	0.40	25	93465	45	16	22	7	47
TMR_00366	tmRNA links to Rfam database...	0.65	0.57	0.74	57	67819	31	5	15	11	43
TMR_00372	tmRNA links to Rfam database...	0.44	0.20	1.00	19	70481	0	0	0	0	77
TMR_00374	tmRNA links to Rfam database...	0.48	0.26	0.89	24	81783	3	1	2	0	68
TMR_00375	tmRNA links to Rfam database...	0.68	0.56	0.83	55	73470	22	3	8	11	43
TMR_00376	tmRNA links to Rfam database...	0.47	0.22	1.00	21	74670	0	0	0	0	74
TMR_00378	tmRNA links to Rfam database...	0.63	0.53	0.76	51	67829	26	6	10	10	46
TMR_00383	tmRNA links to Rfam database...	0.40	0.16	1.00	16	66779	0	0	0	0	84
TMR_00384	tmRNA links to Rfam database...	0.76	0.61	0.96	66	65634	8	0	3	5	42
TMR_00393	tmRNA links to Rfam database...	0.58	0.62	0.53	33	53239	57	10	19	28	20
TMR_00395	tmRNA links to Rfam database...	0.76	0.63	0.92	69	64545	10	2	4	4	40
TMR_00398	tmRNA links to Rfam database...	0.79	0.67	0.93	71	65265	9	1	4	4	35
TMR_00399	tmRNA links to Rfam database...	0.45	0.31	0.66	29	64936	25	7	8	10	65
TMR_00404	tmRNA links to Rfam database...	0.66	0.57	0.76	52	67460	27	3	13	11	40
TMR_00408	tmRNA links to Rfam database...	0.73	0.58	0.91	51	66010	9	3	2	4	37
TMR_00409	tmRNA links to Rfam database...	0.64	0.41	1.00	19	68616	0	0	0	0	27
TMR_00411	tmRNA links to Rfam database...	0.56	0.36	0.89	31	61040	6	1	3	2	56
TMR_00415	tmRNA links to Rfam database...	0.68	0.55	0.82	56	67093	17	2	10	5	45
TMR_00419	tmRNA links to Rfam database...	0.64	0.43	0.96	48	81760	2	0	2	0	63
TMR_00422	tmRNA links to Rfam database...	0.76	0.64	0.89	59	67830	20	2	5	13	33
TMR_00423	tmRNA links to Rfam database...	0.65	0.44	0.97	32	63870	3	0	1	2	41
TMR_00427	tmRNA links to Rfam database...	0.73	0.59	0.90	57	67465	11	5	1	5	40
TMR_00429	tmRNA links to Rfam database...	0.64	0.53	0.76	58	74615	27	6	12	9	51
TMR_00430	tmRNA links to Rfam database...	0.42	0.25	0.73	27	82584	12	0	10	2	82
TMR_00431	tmRNA links to Rfam database...	0.56	0.31	1.00	17	51986	0	0	0	0	38
TMR_00432	tmRNA links to Rfam database...	0.63	0.55	0.72	57	79721	24	2	20	2	47
TMR_00433	tmRNA links to Rfam database...	0.67	0.57	0.80	60	80125	16	2	13	1	46
TMR_00439	tmRNA links to Rfam database...	0.73	0.57	0.92	58	68572	12	3	2	7	43
TMR_00441	tmRNA links to Rfam database...	0.62	0.40	0.97	33	62094	11	1	0	10	50
TMR_00443	tmRNA links to Rfam database...	0.69	0.55	0.86	57	67095	13	1	8	4	47
TMR_00448	tmRNA links to Rfam database...	0.65	0.53	0.80	49	62067	14	3	9	2	43
TMR_00451	tmRNA links to Rfam database...	0.54	0.36	0.80	32	63506	12	3	5	4	57
TMR_00457	tmRNA links to Rfam database...	0.69	0.58	0.82	59	78534	17	3	10	4	43
TMR_00458	tmRNA links to Rfam database...	0.61	0.41	0.90	38	63504	7	3	1	3	55
TMR_00460	tmRNA links to Rfam database...	0.67	0.54	0.83	57	79332	16	2	10	4	49
TMR_00465	tmRNA links to Rfam database...	0.50	0.31	0.81	29	64225	11	3	4	4	65
TMR_00469	tmRNA links to Rfam database...	0.79	0.70	0.90	70	64542	11	4	4	3	30
TMR_00472	tmRNA links to Rfam database...	0.77	0.66	0.89	64	64548	13	5	3	5	33
TMR_00478	tmRNA links to Rfam database...	0.51	0.28	0.93	28	71980	3	2	0	1	71
TMR_00498	tmRNA links to Rfam database...	0.58	0.52	0.65	51	68928	35	12	15	8	48
TMR_00499	tmRNA links to Rfam database...	0.35	0.12	1.00	12	64608	0	0	0	0	87
TMR_00501	tmRNA links to Rfam database...	0.57	0.37	0.89	34	62443	4	2	2	0	58
TMR_00502	tmRNA links to Rfam database...	0.49	0.37	0.65	34	75414	26	6	12	8	59
TMR_00503	tmRNA links to Rfam database...	0.49	0.24	1.00	27	67869	7	0	0	7	84
TMR_00519	tmRNA links to Rfam database...	0.61	0.46	0.80	44	63135	20	2	9	9	51
TMR_00520	tmRNA links to Rfam database...	0.60	0.47	0.76	47	63128	24	3	12	9	52
TMR_00522	tmRNA links to Rfam database...	0.65	0.47	0.88	46	63138	14	2	4	8	51
TMR_00528	tmRNA links to Rfam database...	0.60	0.46	0.78	45	63132	22	4	9	9	52
TMR_00540	tmRNA links to Rfam database...	0.69	0.54	0.88	56	73472	11	2	6	3	48
TMR_00541	tmRNA links to Rfam database...	0.52	0.27	1.00	28	61748	5	0	0	5	77
TMR_00544	tmRNA links to Rfam database...	0.41	0.17	1.00	18	89658	0	0	0	0	90
TMR_00547	tmRNA links to Rfam database...	0.68	0.52	0.90	52	65283	8	0	6	2	48
TMR_00553	tmRNA links to Rfam database...	0.60	0.51	0.71	41	48147	20	2	15	3	40
TMR_00559	tmRNA links to Rfam database...	0.46	0.24	0.89	24	62454	9	1	2	6	77
TMR_00560	tmRNA links to Rfam database...	0.70	0.54	0.90	53	61016	12	1	5	6	45
TMR_00562	tmRNA links to Rfam database...	0.68	0.56	0.83	57	72702	17	6	6	5	45
TMR_00563	tmRNA links to Rfam database...	0.66	0.57	0.77	59	75389	23	7	11	5	44
TMR_00566	tmRNA links to Rfam database...	0.69	0.54	0.89	54	60665	14	1	6	7	46
TMR_00568	tmRNA links to Rfam database...	0.69	0.54	0.88	53	60666	15	0	7	8	46
TMR_00570	tmRNA links to Rfam database...	0.70	0.56	0.89	54	60317	15	0	7	8	43
TMR_00571	tmRNA links to Rfam database...	0.66	0.49	0.89	49	60671	14	1	5	8	50
TMR_00576	tmRNA links to Rfam database...	0.68	0.52	0.88	53	60318	14	1	6	7	49
TMR_00579	tmRNA links to Rfam database...	0.54	0.42	0.69	38	80546	22	7	10	5	52
TMR_00580	tmRNA links to Rfam database...	0.65	0.49	0.88	49	60670	14	1	6	7	51
TMR_00581	tmRNA links to Rfam database...	0.66	0.50	0.88	49	62425	14	2	5	7	49
TMR_00584	tmRNA links to Rfam database...	0.72	0.57	0.92	55	61015	13	1	4	8	42
TMR_00586	tmRNA links to Rfam database...	0.70	0.56	0.89	54	61014	14	1	6	7	43
TMR_00587	tmRNA links to Rfam database...	0.66	0.44	0.98	44	61380	2	1	0	1	56
TMR_00588	tmRNA links to Rfam database...	0.57	0.43	0.77	43	77365	14	2	11	1	58
TMR_00594	tmRNA links to Rfam database...	0.61	0.47	0.79	49	79339	16	2	11	3	55
TMR_00596	tmRNA links to Rfam database...	0.65	0.48	0.87	46	78157	12	2	5	5	49
TMR_00599	tmRNA links to Rfam database...	0.50	0.38	0.68	27	63150	24	4	9	11	45
TMR_00600	tmRNA links to Rfam database...	0.60	0.46	0.79	53	79733	14	3	11	0	62
TMR_00601	tmRNA links to Rfam database...	0.80	0.69	0.94	29	58965	10	0	2	8	13
TMR_00603	tmRNA links to Rfam database...	0.82	0.72	0.94	31	60345	12	1	1	10	12
TMR_00604	tmRNA links to Rfam database...	0.51	0.27	0.97	30	62804	1	0	1	0	82
TMR_00605	tmRNA links to Rfam database...	0.64	0.50	0.83	54	74240	15	2	9	4	54
TMR_00606	tmRNA links to Rfam database...	0.76	0.64	0.91	69	68930	12	0	7	5	38
TMR_00609	tmRNA links to Rfam database...	0.76	0.65	0.89	74	63463	9	1	8	0	39
TMR_00610	tmRNA links to Rfam database...	0.73	0.55	0.97	57	62069	3	2	0	1	47
TMR_00611	tmRNA links to Rfam database...	0.68	0.60	0.77	61	61346	20	4	14	2	41
TMR_00612	tmRNA links to Rfam database...	0.59	0.35	1.00	36	60690	1	0	0	1	68
TMR_00614	tmRNA links to Rfam database...	0.65	0.47	0.89	49	61020	9	0	6	3	55
TMR_00615	tmRNA links to Rfam database...	0.51	0.26	1.00	25	63878	8	0	0	8	71
TMR_00616	tmRNA links to Rfam database...	0.76	0.63	0.91	62	67093	11	0	6	5	37
TMR_00617	tmRNA links to Rfam database...	0.49	0.24	1.00	14	34702	0	0	0	0	44
TMR_00623	tmRNA links to Rfam database...	0.49	0.25	0.96	27	61397	6	0	1	5	81
TMR_00624	tmRNA links to Rfam database...	0.42	0.18	1.00	19	62462	1	0	0	1	89
TMR_00625	tmRNA links to Rfam database...	0.58	0.45	0.74	48	78938	20	3	14	3	58
TMR_00626	tmRNA links to Rfam database...	0.71	0.51	0.98	56	67839	6	1	0	5	53
TMR_00680	tmRNA links to Rfam database...	0.47	0.23	0.96	23	67872	2	0	1	1	76
TMR_00681	tmRNA links to Rfam database...	0.71	0.63	0.80	61	65990	23	1	14	8	36
TMR_00683	tmRNA links to Rfam database...	0.41	0.18	0.95	18	83009	5	1	0	4	82
TMR_00686	tmRNA links to Rfam database...	0.60	0.54	0.68	58	71168	38	8	19	11	50
TMR_00687	tmRNA links to Rfam database...	0.66	0.58	0.75	64	71546	29	9	12	8	47
TMR_00696	tmRNA links to Rfam database...	0.46	0.28	0.76	32	85036	10	2	8	0	82
TMR_00698	tmRNA links to Rfam database...	0.46	0.28	0.76	29	63152	9	1	8	0	75
TMR_00699	tmRNA links to Rfam database...	0.76	0.63	0.91	64	67091	11	1	5	5	38
TMR_00702	tmRNA links to Rfam database...	0.77	0.65	0.90	65	67089	12	1	6	5	35
TMR_00703	tmRNA links to Rfam database...	0.78	0.66	0.92	65	67457	11	1	5	5	34
TMR_00706	tmRNA links to Rfam database...	0.46	0.21	1.00	22	66408	0	0	0	0	81
TMR_00711	tmRNA links to Rfam database...	0.53	0.35	0.81	34	67854	9	6	2	1	64
TMR_00712	tmRNA links to Rfam database...	0.46	0.25	0.84	27	78574	10	2	3	5	82
TMR_00716	tmRNA links to Rfam database...	0.39	0.19	0.79	19	62811	11	2	3	6	81

^top

Performance of McQFold - scored lower in this pairwise comparison

1. Total counts & total scores for McQFold

Total Base Pair Counts
Total TP	32575
Total TN	44930254
Total FP	41970
Total FP CONTRA	6243
Total FP INCONS	31502
Total FP COMP	4225
Total FN	41119

Total Scores
MCC	0.452
Average MCC ± 95% Confidence Intervals	0.450 ± 0.012
Sensitivity	0.442
Positive Predictive Value	0.463
Nr of predictions	759

^top

2. Individual counts for McQFold [ download as .csv ]

RNA Chain	Rfam family	MCC	SENS	PPV	TP	TN	FP	FP CONTRA	FP INCONS	FP COMP	FN
ASE_00001	RNaseP_arch links to Rfam database...	0.78	0.73	0.82	55	34124	17	7	5	5	20
ASE_00002	RNaseP_arch links to Rfam database...	0.80	0.75	0.86	55	35447	12	4	5	3	18
ASE_00004	RNaseP_bact_a links to Rfam database...	0.50	0.48	0.52	47	47805	48	9	34	5	50
ASE_00005	RNaseP_bact_a links to Rfam database...	0.52	0.46	0.59	54	57878	40	0	38	2	63
ASE_00006	RNaseP_bact_a links to Rfam database...	0.35	0.34	0.36	32	47498	60	6	50	4	61
ASE_00007	RNaseP_bact_a links to Rfam database...	0.42	0.39	0.46	43	59591	55	2	49	4	67
ASE_00009	RNaseP_arch links to Rfam database...	0.67	0.64	0.70	43	26045	18	3	15	0	24
ASE_00010	RNaseP_bact_b links to Rfam database...	0.45	0.49	0.42	40	49675	58	19	36	3	42
ASE_00012	RNaseP_bact_a links to Rfam database...	0.42	0.39	0.46	48	73816	61	3	53	5	75
ASE_00014	RNaseP_arch links to Rfam database...	0.47	0.47	0.48	50	54180	56	9	46	1	56
ASE_00016	-	0.64	0.67	0.60	41	65998	73	10	17	46	20
ASE_00017	RNaseP_nuc links to Rfam database...	0.18	0.20	0.17	13	50963	78	25	39	14	51
ASE_00018	RNaseP_bact_a links to Rfam database...	0.54	0.51	0.57	68	80482	52	2	49	1	66
ASE_00020	RNaseP_bact_a links to Rfam database...	0.47	0.47	0.48	59	73797	64	9	55	0	67
ASE_00021	RNaseP_bact_a links to Rfam database...	0.60	0.54	0.67	86	104068	47	2	40	5	74
ASE_00022	RNaseP_bact_b links to Rfam database...	0.60	0.56	0.65	70	82920	45	5	33	7	54
ASE_00023	RNaseP_bact_a links to Rfam database...	0.57	0.57	0.58	72	84131	57	6	46	5	55
ASE_00024	-	0.69	0.67	0.71	47	29337	26	4	15	7	23
ASE_00025	RNaseP_nuc links to Rfam database...	0.36	0.37	0.35	26	78531	92	6	43	43	45
ASE_00026	RNaseP_bact_a links to Rfam database...	0.34	0.31	0.38	34	59595	58	7	49	2	76
ASE_00028	RNaseP_bact_b links to Rfam database...	0.56	0.54	0.59	68	84550	50	11	37	2	58
ASE_00029	RNaseP_bact_a links to Rfam database...	0.53	0.49	0.58	60	82924	48	3	41	4	62
ASE_00030	RNaseP_bact_a links to Rfam database...	0.59	0.56	0.62	81	85360	51	6	44	1	64
ASE_00031	RNaseP_bact_a links to Rfam database...	0.54	0.50	0.58	63	86627	56	5	41	10	63
ASE_00032	RNaseP_bact_a links to Rfam database...	0.61	0.58	0.64	69	80093	39	12	26	1	49
ASE_00033	RNaseP_bact_a links to Rfam database...	0.38	0.34	0.42	41	64883	57	3	53	1	80
ASE_00035	RNaseP_bact_a links to Rfam database...	0.29	0.27	0.32	32	70401	71	9	58	4	86
ASE_00036	RNaseP_bact_a links to Rfam database...	0.48	0.45	0.50	60	75736	64	8	51	5	72
ASE_00037	RNaseP_bact_a links to Rfam database...	0.42	0.38	0.46	42	59248	50	5	45	0	68
ASE_00038	RNaseP_bact_a links to Rfam database...	0.41	0.39	0.43	39	53538	53	3	48	2	62
ASE_00040	RNaseP_bact_a links to Rfam database...	0.27	0.26	0.29	34	78886	88	9	74	5	99
ASE_00041	RNaseP_bact_a links to Rfam database...	0.46	0.43	0.51	46	57539	48	6	39	3	62
ASE_00042	RNaseP_bact_a links to Rfam database...	0.56	0.53	0.60	77	89972	53	4	47	2	68
ASE_00044	RNaseP_bact_a links to Rfam database...	0.78	0.76	0.80	80	54515	25	4	16	5	25
ASE_00045	RNaseP_bact_b links to Rfam database...	0.30	0.29	0.31	23	47203	59	7	45	7	57
ASE_00046	RNaseP_bact_a links to Rfam database...	0.57	0.51	0.63	53	50319	32	3	28	1	50
ASE_00047	RNaseP_bact_a links to Rfam database...	0.46	0.42	0.50	54	74198	54	3	50	1	76
ASE_00052	RNaseP_bact_a links to Rfam database...	0.44	0.42	0.46	47	61323	59	9	46	4	65
ASE_00053	RNaseP_bact_a links to Rfam database...	0.56	0.55	0.57	73	79274	62	9	45	8	60
ASE_00056	-	0.43	0.43	0.42	31	30803	47	5	37	5	41
ASE_00057	RNaseP_bact_a links to Rfam database...	0.55	0.52	0.58	70	82095	57	13	37	7	64
ASE_00064	RNaseP_bact_a links to Rfam database...	0.50	0.49	0.51	44	45364	46	5	38	3	45
ASE_00066	RNaseP_bact_a links to Rfam database...	0.35	0.32	0.39	41	72286	64	3	60	1	89
ASE_00068	RNaseP_bact_a links to Rfam database...	0.70	0.60	0.82	51	37613	16	2	9	5	34
ASE_00069	RNaseP_bact_a links to Rfam database...	0.53	0.50	0.56	70	82902	60	6	50	4	70
ASE_00074	RNaseP_bact_a links to Rfam database...	0.42	0.40	0.44	48	67786	62	3	59	0	71
ASE_00075	RNaseP_bact_a links to Rfam database...	0.51	0.46	0.57	74	108681	62	4	52	6	88
ASE_00076	RNaseP_bact_a links to Rfam database...	0.51	0.47	0.56	56	68165	46	2	42	2	62
ASE_00077	RNaseP_bact_a links to Rfam database...	0.42	0.40	0.45	34	45075	47	5	36	6	52
ASE_00078	RNaseP_bact_a links to Rfam database...	0.55	0.52	0.58	43	42997	38	2	29	7	40
ASE_00079	RNaseP_bact_a links to Rfam database...	0.55	0.52	0.59	52	55523	39	5	31	3	48
ASE_00080	RNaseP_bact_a links to Rfam database...	0.32	0.30	0.35	37	71524	71	6	64	1	86
ASE_00081	RNaseP_bact_a links to Rfam database...	0.31	0.29	0.34	28	49688	56	5	49	2	69
ASE_00082	RNaseP_bact_a links to Rfam database...	0.38	0.36	0.40	42	70396	73	2	60	11	74
ASE_00083	RNaseP_bact_a links to Rfam database...	0.25	0.25	0.26	27	62379	75	6	69	0	83
ASE_00084	RNaseP_bact_a links to Rfam database...	0.60	0.57	0.64	56	53540	36	2	30	4	43
ASE_00087	RNaseP_bact_a links to Rfam database...	0.49	0.42	0.57	61	88303	52	2	44	6	83
ASE_00089	-	0.21	0.20	0.22	16	31303	58	2	54	2	63
ASE_00090	RNaseP_bact_a links to Rfam database...	0.52	0.52	0.52	53	55510	52	6	42	4	48
ASE_00092	RNaseP_bact_a links to Rfam database...	0.46	0.44	0.49	50	63444	55	6	46	3	63
ASE_00096	RNaseP_bact_a links to Rfam database...	0.56	0.50	0.63	58	63454	35	2	32	1	57
ASE_00099	RNaseP_bact_a links to Rfam database...	0.58	0.56	0.61	67	64510	44	4	39	1	53
ASE_00100	RNaseP_nuc links to Rfam database...	0.32	0.33	0.31	25	82134	111	7	49	55	51
ASE_00102	RNaseP_bact_a links to Rfam database...	0.47	0.45	0.50	75	117705	78	5	70	3	91
ASE_00104	RNaseP_bact_a links to Rfam database...	0.53	0.52	0.55	62	64148	52	8	43	1	57
ASE_00105	RNaseP_bact_a links to Rfam database...	0.35	0.32	0.38	36	64165	64	2	58	4	75
ASE_00107	RNaseP_bact_a links to Rfam database...	0.56	0.53	0.59	67	73039	48	1	46	1	60
ASE_00108	RNaseP_nuc links to Rfam database...	0.33	0.38	0.29	24	46888	72	19	40	13	39
ASE_00111	RNaseP_nuc links to Rfam database...	0.34	0.42	0.27	24	49998	74	33	31	10	33
ASE_00112	RNaseP_bact_a links to Rfam database...	0.74	0.70	0.78	81	75362	33	2	21	10	35
ASE_00114	RNaseP_bact_b links to Rfam database...	0.26	0.26	0.27	20	45376	63	10	45	8	57
ASE_00115	RNaseP_bact_a links to Rfam database...	0.61	0.57	0.64	58	54525	40	4	28	8	43
ASE_00116	RNaseP_arch links to Rfam database...	0.52	0.50	0.54	33	31565	32	3	25	4	33
ASE_00118	RNaseP_bact_a links to Rfam database...	0.39	0.37	0.40	38	60632	60	3	53	4	64
ASE_00119	RNaseP_bact_a links to Rfam database...	0.83	0.81	0.86	87	62734	14	2	12	0	21
ASE_00120	RNaseP_arch links to Rfam database...	0.47	0.46	0.49	43	46883	45	4	41	0	51
ASE_00121	RNaseP_arch links to Rfam database...	0.47	0.46	0.48	42	45063	47	7	38	2	50
ASE_00122	RNaseP_bact_a links to Rfam database...	0.70	0.67	0.73	59	43284	25	1	21	3	29
ASE_00123	RNaseP_bact_a links to Rfam database...	0.43	0.40	0.47	34	38430	45	0	39	6	51
ASE_00125	RNaseP_bact_a links to Rfam database...	0.43	0.38	0.49	33	39272	38	2	33	3	55
ASE_00126	RNaseP_bact_a links to Rfam database...	0.54	0.51	0.57	42	40396	33	3	29	1	40
ASE_00128	RNaseP_bact_a links to Rfam database...	0.43	0.39	0.48	39	53219	47	3	40	4	61
ASE_00129	RNaseP_bact_a links to Rfam database...	0.61	0.59	0.62	66	62729	42	3	37	2	45
ASE_00131	RNaseP_bact_a links to Rfam database...	0.37	0.33	0.42	28	39274	43	3	35	5	57
ASE_00132	RNaseP_bact_a links to Rfam database...	0.65	0.60	0.71	57	50323	24	4	19	1	38
ASE_00134	RNaseP_bact_a links to Rfam database...	0.33	0.32	0.35	30	50317	57	7	49	1	65
ASE_00135	RNaseP_bact_a links to Rfam database...	0.30	0.28	0.31	31	63090	74	3	66	5	78
ASE_00136	RNaseP_bact_a links to Rfam database...	0.67	0.64	0.71	59	48122	32	1	23	8	33
ASE_00137	RNaseP_bact_a links to Rfam database...	0.53	0.52	0.55	51	48423	45	5	37	3	47
ASE_00138	RNaseP_bact_a links to Rfam database...	0.56	0.51	0.63	41	40405	25	4	20	1	40
ASE_00139	RNaseP_bact_a links to Rfam database...	0.55	0.52	0.58	54	54192	42	1	38	3	50
ASE_00140	RNaseP_bact_a links to Rfam database...	0.53	0.49	0.57	61	70769	47	7	39	1	64
ASE_00142	RNaseP_bact_a links to Rfam database...	0.59	0.57	0.61	69	67048	47	5	39	3	53
ASE_00144	-	0.51	0.51	0.52	49	58217	45	11	34	0	48
ASE_00145	RNaseP_arch links to Rfam database...	0.52	0.50	0.54	56	70022	50	2	45	3	55
ASE_00146	RNaseP_bact_a links to Rfam database...	0.53	0.49	0.58	61	70770	48	1	44	3	63
ASE_00148	RNaseP_arch links to Rfam database...	0.64	0.62	0.66	96	112430	49	4	45	0	58
ASE_00151	RNaseP_bact_a links to Rfam database...	0.53	0.49	0.58	48	51920	39	9	26	4	50
ASE_00153	RNaseP_nuc links to Rfam database...	0.51	0.53	0.49	39	57550	72	9	32	31	34
ASE_00154	RNaseP_arch links to Rfam database...	0.62	0.61	0.64	65	65239	37	1	36	0	42
ASE_00155	RNaseP_arch links to Rfam database...	0.59	0.56	0.62	80	93398	54	3	47	4	62
ASE_00159	-	0.41	0.38	0.44	23	34928	48	2	27	19	38
ASE_00160	-	0.60	0.64	0.57	32	23815	39	2	22	15	18
ASE_00161	RNaseP_bact_b links to Rfam database...	0.29	0.29	0.29	25	53543	63	8	52	3	62
ASE_00163	RNaseP_bact_a links to Rfam database...	0.41	0.40	0.42	37	53213	57	4	47	6	56
ASE_00165	RNaseP_bact_a links to Rfam database...	0.40	0.39	0.42	39	52882	56	6	48	2	62
ASE_00168	RNaseP_nuc links to Rfam database...	0.32	0.38	0.28	24	60640	89	18	44	27	40
ASE_00169	RNaseP_bact_a links to Rfam database...	0.43	0.38	0.48	41	57205	47	2	43	2	66
ASE_00170	RNaseP_bact_a links to Rfam database...	0.72	0.69	0.74	64	48742	24	2	20	2	29
ASE_00171	RNaseP_bact_a links to Rfam database...	0.52	0.50	0.55	47	48431	38	3	35	0	47
ASE_00172	RNaseP_bact_a links to Rfam database...	0.50	0.47	0.54	50	58903	50	5	38	7	56
ASE_00174	RNaseP_bact_a links to Rfam database...	0.44	0.41	0.46	45	60978	53	5	47	1	64
ASE_00175	RNaseP_bact_a links to Rfam database...	0.22	0.21	0.23	23	59931	80	5	72	3	84
ASE_00176	RNaseP_bact_a links to Rfam database...	0.65	0.59	0.71	65	59940	30	4	22	4	45
ASE_00179	RNaseP_bact_a links to Rfam database...	0.54	0.52	0.56	44	44174	36	8	27	1	40
ASE_00180	RNaseP_bact_a links to Rfam database...	0.42	0.41	0.42	41	51263	60	4	52	4	59
ASE_00181	RNaseP_bact_a links to Rfam database...	0.53	0.54	0.53	57	57522	51	4	47	0	49
ASE_00182	RNaseP_bact_a links to Rfam database...	0.45	0.40	0.50	55	84145	57	2	53	2	81
ASE_00183	RNaseP_bact_a links to Rfam database...	0.67	0.63	0.71	71	61325	36	0	29	7	42
ASE_00184	RNaseP_bact_a links to Rfam database...	0.52	0.51	0.54	52	54519	46	8	36	2	50
ASE_00185	RNaseP_bact_a links to Rfam database...	0.29	0.28	0.31	36	73419	81	14	67	0	92
ASE_00186	RNaseP_bact_a links to Rfam database...	0.55	0.51	0.59	67	78889	56	3	44	9	65
ASE_00187	RNaseP_arch links to Rfam database...	0.51	0.48	0.56	55	68536	48	3	41	4	60
ASE_00189	RNaseP_bact_b links to Rfam database...	0.54	0.54	0.55	55	63090	47	7	38	2	47
ASE_00190	RNaseP_bact_b links to Rfam database...	0.55	0.52	0.57	47	45369	40	2	33	5	43
ASE_00191	RNaseP_arch links to Rfam database...	0.49	0.49	0.49	30	29585	35	3	28	4	31
ASE_00192	RNaseP_bact_b links to Rfam database...	0.47	0.45	0.49	60	84543	68	10	53	5	73
ASE_00194	RNaseP_bact_b links to Rfam database...	0.40	0.39	0.42	47	73423	67	15	51	1	72
ASE_00195	-	0.61	0.58	0.64	77	86200	46	8	35	3	56
ASE_00196	RNaseP_arch links to Rfam database...	0.78	0.75	0.81	56	31557	16	2	11	3	19
ASE_00197	RNaseP_bact_a links to Rfam database...	0.42	0.39	0.45	56	89129	76	1	67	8	89
ASE_00198	RNaseP_bact_a links to Rfam database...	0.50	0.46	0.55	47	52564	44	2	37	5	55
ASE_00203	RNaseP_bact_a links to Rfam database...	0.54	0.55	0.53	53	46565	51	4	43	4	43
ASE_00204	RNaseP_bact_b links to Rfam database...	0.53	0.49	0.58	55	67801	46	7	33	6	57
ASE_00205	RNaseP_arch links to Rfam database...	0.52	0.52	0.53	47	45967	45	10	32	3	43
ASE_00209	RNaseP_arch links to Rfam database...	0.62	0.58	0.66	51	42994	26	4	22	0	37
ASE_00210	RNaseP_arch links to Rfam database...	0.57	0.55	0.58	36	27199	28	6	20	2	29
ASE_00212	RNaseP_bact_a links to Rfam database...	0.43	0.40	0.46	59	93832	80	3	67	10	89
ASE_00213	RNaseP_arch links to Rfam database...	0.71	0.70	0.73	46	27198	18	4	13	1	20
ASE_00214	RNaseP_bact_a links to Rfam database...	0.66	0.63	0.70	65	56187	35	2	26	7	38
ASE_00215	RNaseP_bact_a links to Rfam database...	0.30	0.28	0.32	28	48429	60	7	52	1	71
ASE_00216	RNaseP_bact_a links to Rfam database...	0.65	0.62	0.67	51	39264	26	7	18	1	31
ASE_00217	RNaseP_bact_a links to Rfam database...	0.21	0.19	0.25	17	40401	54	6	46	2	73
ASE_00221	RNaseP_bact_a links to Rfam database...	0.32	0.29	0.35	34	64522	65	3	61	1	83
ASE_00222	RNaseP_arch links to Rfam database...	0.52	0.50	0.55	78	111958	65	5	60	0	79
ASE_00227	RNaseP_bact_a links to Rfam database...	0.32	0.29	0.36	38	78898	67	3	64	0	95
ASE_00228	RNaseP_bact_a links to Rfam database...	0.38	0.37	0.40	32	46890	50	11	38	1	54
ASE_00229	RNaseP_bact_a links to Rfam database...	0.52	0.53	0.52	46	42398	44	6	36	2	41
ASE_00231	RNaseP_bact_a links to Rfam database...	0.63	0.60	0.67	58	47808	33	4	25	4	38
ASE_00232	RNaseP_bact_a links to Rfam database...	0.70	0.70	0.69	59	38418	29	8	18	3	25
ASE_00234	RNaseP_bact_a links to Rfam database...	0.31	0.28	0.34	36	75360	71	9	61	1	93
ASE_00237	RNaseP_nuc links to Rfam database...	0.11	0.13	0.09	7	45676	81	21	49	11	49
ASE_00238	RNaseP_bact_a links to Rfam database...	0.47	0.44	0.51	50	64163	50	2	46	2	64
ASE_00240	RNaseP_bact_a links to Rfam database...	0.26	0.26	0.27	24	46575	68	3	63	2	69
ASE_00241	RNaseP_bact_a links to Rfam database...	0.20	0.18	0.23	16	43886	55	3	51	1	71
ASE_00242	RNaseP_bact_a links to Rfam database...	0.63	0.59	0.67	66	60976	34	3	30	1	46
ASE_00245	RNaseP_nuc links to Rfam database...	0.59	0.56	0.61	44	55206	54	0	28	26	34
ASE_00246	RNaseP_nuc links to Rfam database...	0.29	0.28	0.30	19	48141	65	6	39	20	48
ASE_00247	RNaseP_nuc links to Rfam database...	0.60	0.63	0.57	40	54215	63	11	19	33	24
ASE_00248	RNaseP_bact_a links to Rfam database...	0.19	0.18	0.20	20	62382	81	6	73	2	94
ASE_00250	RNaseP_bact_a links to Rfam database...	0.61	0.57	0.64	75	78886	49	2	40	7	56
ASE_00252	RNaseP_bact_a links to Rfam database...	0.48	0.45	0.51	76	115292	77	4	68	5	92
ASE_00254	RNaseP_bact_a links to Rfam database...	0.38	0.37	0.40	30	36781	48	3	42	3	52
ASE_00255	RNaseP_bact_a links to Rfam database...	0.55	0.53	0.58	69	74572	54	4	46	4	61
ASE_00257	RNaseP_bact_a links to Rfam database...	0.50	0.48	0.53	47	50951	49	3	39	7	50
ASE_00258	RNaseP_nuc links to Rfam database...	0.76	0.78	0.74	42	26739	22	3	12	7	12
ASE_00259	RNaseP_bact_a links to Rfam database...	0.44	0.39	0.50	47	73059	50	5	42	3	74
ASE_00263	RNaseP_bact_a links to Rfam database...	0.62	0.59	0.65	71	70390	40	4	35	1	49
ASE_00264	RNaseP_nuc links to Rfam database...	0.43	0.43	0.44	43	49043	59	4	51	4	57
ASE_00267	RNaseP_bact_a links to Rfam database...	0.21	0.19	0.23	17	45075	63	8	50	5	71
ASE_00270	RNaseP_bact_a links to Rfam database...	0.45	0.42	0.49	54	72279	57	5	52	0	74
ASE_00274	RNaseP_bact_a links to Rfam database...	0.49	0.44	0.55	45	55529	38	5	32	1	58
ASE_00277	RNaseP_bact_a links to Rfam database...	0.39	0.37	0.40	34	48121	50	17	33	0	57
ASE_00279	RNaseP_bact_a links to Rfam database...	0.16	0.15	0.17	15	53215	73	2	69	2	86
ASE_00280	RNaseP_bact_a links to Rfam database...	0.40	0.40	0.41	39	51908	60	9	47	4	59
ASE_00281	RNaseP_bact_a links to Rfam database...	0.74	0.66	0.84	58	44482	17	0	11	6	30
ASE_00282	RNaseP_bact_a links to Rfam database...	0.55	0.50	0.60	64	77708	50	7	36	7	63
ASE_00283	RNaseP_bact_a links to Rfam database...	0.54	0.52	0.55	56	61675	47	3	42	2	51
ASE_00284	RNaseP_bact_a links to Rfam database...	0.21	0.20	0.22	22	58211	82	8	70	4	86
ASE_00285	RNaseP_bact_a links to Rfam database...	0.54	0.52	0.57	63	68895	53	2	46	5	59
ASE_00286	RNaseP_bact_a links to Rfam database...	0.38	0.35	0.42	32	46589	45	4	40	1	60
ASE_00287	RNaseP_bact_a links to Rfam database...	0.28	0.27	0.30	28	54852	67	9	57	1	75
ASE_00288	RNaseP_bact_a links to Rfam database...	0.68	0.60	0.78	56	45984	22	0	16	6	37
ASE_00289	RNaseP_bact_a links to Rfam database...	0.71	0.65	0.78	102	100895	33	3	25	5	55
ASE_00291	-	0.46	0.46	0.47	43	48425	50	9	39	2	51
ASE_00292	RNaseP_bact_a links to Rfam database...	0.42	0.38	0.48	52	81701	58	3	54	1	86
ASE_00294	RNaseP_bact_a links to Rfam database...	0.43	0.41	0.45	70	114326	87	5	80	2	101
ASE_00295	RNaseP_bact_a links to Rfam database...	0.46	0.41	0.52	54	73816	53	6	44	3	77
ASE_00296	RNaseP_bact_a links to Rfam database...	0.15	0.14	0.17	21	91680	105	6	99	0	124
ASE_00297	RNaseP_bact_a links to Rfam database...	0.34	0.33	0.36	32	52887	59	8	48	3	66
ASE_00298	RNaseP_bact_a links to Rfam database...	0.21	0.21	0.22	24	67418	87	14	72	1	89
ASE_00299	RNaseP_bact_a links to Rfam database...	0.48	0.45	0.51	45	49366	50	7	37	6	55
ASE_00303	RNaseP_nuc links to Rfam database...	0.62	0.61	0.63	58	67804	53	2	32	19	37
ASE_00305	RNaseP_bact_b links to Rfam database...	0.64	0.67	0.62	57	54523	44	7	28	9	28
ASE_00313	RNaseP_nuc links to Rfam database...	0.60	0.57	0.62	51	62399	57	4	27	26	38
ASE_00316	RNaseP_nuc links to Rfam database...	0.45	0.48	0.42	47	107767	88	16	50	22	51
ASE_00318	RNaseP_bact_b links to Rfam database...	0.64	0.62	0.66	73	80090	41	10	27	4	45
ASE_00321	RNaseP_bact_b links to Rfam database...	0.73	0.73	0.74	64	54528	29	3	20	6	24
ASE_00322	-	0.77	0.83	0.71	40	29347	42	3	13	26	8
ASE_00327	RNaseP_nuc links to Rfam database...	0.78	0.75	0.82	67	57209	33	3	12	18	22
ASE_00328	RNaseP_bact_b links to Rfam database...	0.61	0.60	0.63	67	72665	47	2	37	8	45
ASE_00329	RNaseP_nuc links to Rfam database...	0.76	0.76	0.75	48	40691	38	14	2	22	15
ASE_00330	RNaseP_nuc links to Rfam database...	0.64	0.67	0.63	60	56184	52	10	26	16	30
ASE_00332	RNaseP_bact_a links to Rfam database...	0.41	0.40	0.43	55	81683	75	3	69	3	83
ASE_00335	RNaseP_bact_b links to Rfam database...	0.62	0.58	0.68	67	75367	37	5	27	5	49
ASE_00337	RNaseP_nuc links to Rfam database...	0.54	0.56	0.52	40	39263	49	5	32	12	31
ASE_00338	RNaseP_nuc links to Rfam database...	0.44	0.43	0.45	42	66336	67	6	46	15	56
ASE_00339	RNaseP_bact_a links to Rfam database...	0.50	0.50	0.51	59	80085	64	7	49	8	60
ASE_00340	RNaseP_bact_a links to Rfam database...	0.34	0.35	0.33	30	45965	64	10	51	3	55
ASE_00342	RNaseP_bact_a links to Rfam database...	0.68	0.63	0.73	73	62381	29	2	25	2	42
ASE_00343	RNaseP_bact_a links to Rfam database...	0.69	0.69	0.69	78	83323	53	7	28	18	35
ASE_00344	-	0.72	0.75	0.70	42	27201	36	4	14	18	14
ASE_00346	RNaseP_arch links to Rfam database...	0.38	0.36	0.41	35	48120	53	4	46	3	62
ASE_00350	-	0.91	0.87	0.96	45	29599	26	0	2	24	7
ASE_00353	RNaseP_bact_a links to Rfam database...	0.61	0.60	0.62	64	57867	40	2	37	1	43
ASE_00359	RNaseP_arch links to Rfam database...	0.11	0.10	0.12	8	42711	62	2	57	3	72
ASE_00360	RNaseP_arch links to Rfam database...	0.40	0.37	0.44	24	29348	31	3	28	0	41
ASE_00361	RNaseP_bact_a links to Rfam database...	0.43	0.40	0.47	51	75358	59	8	49	2	76
ASE_00362	RNaseP_bact_a links to Rfam database...	0.53	0.53	0.53	48	48114	45	4	39	2	43
ASE_00363	RNaseP_bact_a links to Rfam database...	0.49	0.48	0.51	45	51272	50	5	38	7	49
ASE_00364	RNaseP_bact_a links to Rfam database...	0.55	0.51	0.59	54	54193	39	3	35	1	51
ASE_00366	RNaseP_bact_a links to Rfam database...	0.40	0.40	0.40	39	58555	60	10	49	1	59
ASE_00367	RNaseP_bact_a links to Rfam database...	0.44	0.43	0.45	37	42988	54	2	44	8	49
ASE_00369	RNaseP_bact_a links to Rfam database...	0.57	0.55	0.60	59	55846	42	6	34	2	48
ASE_00370	RNaseP_bact_a links to Rfam database...	0.43	0.40	0.47	34	41832	40	6	33	1	50
ASE_00372	RNaseP_bact_a links to Rfam database...	0.56	0.55	0.58	55	51908	43	7	33	3	45
ASE_00374	RNaseP_bact_a links to Rfam database...	0.56	0.56	0.56	49	44762	39	6	33	0	39
ASE_00375	RNaseP_bact_a links to Rfam database...	0.56	0.51	0.61	56	60286	41	2	34	5	54
ASE_00376	RNaseP_bact_a links to Rfam database...	0.55	0.51	0.60	54	56863	37	4	32	1	51
ASE_00377	RNaseP_bact_a links to Rfam database...	0.76	0.71	0.81	76	57536	23	2	16	5	31
ASE_00379	RNaseP_bact_a links to Rfam database...	0.46	0.44	0.49	39	45976	42	7	34	1	50
ASE_00380	RNaseP_bact_a links to Rfam database...	0.44	0.41	0.46	41	54857	51	1	47	3	58
ASE_00382	RNaseP_bact_a links to Rfam database...	0.73	0.68	0.78	57	41832	18	5	11	2	27
ASE_00383	RNaseP_bact_a links to Rfam database...	0.39	0.36	0.43	38	54526	51	3	48	0	67
ASE_00384	RNaseP_bact_a links to Rfam database...	0.32	0.30	0.35	28	48435	62	3	50	9	64
ASE_00385	RNaseP_bact_a links to Rfam database...	0.58	0.56	0.61	45	41831	31	10	19	2	36
ASE_00386	RNaseP_bact_a links to Rfam database...	0.58	0.56	0.60	54	50313	38	7	29	2	42
ASE_00387	RNaseP_bact_a links to Rfam database...	0.49	0.48	0.50	50	55845	53	5	45	3	54
ASE_00388	RNaseP_bact_a links to Rfam database...	0.51	0.49	0.54	44	45671	48	1	37	10	45
ASE_00390	RNaseP_bact_a links to Rfam database...	0.53	0.51	0.55	43	42117	46	1	34	11	42
ASE_00393	RNaseP_bact_a links to Rfam database...	0.37	0.34	0.41	32	47816	53	2	45	6	61
ASE_00394	RNaseP_bact_a links to Rfam database...	0.57	0.55	0.59	51	46884	41	2	34	5	42
ASE_00395	RNaseP_bact_a links to Rfam database...	0.71	0.67	0.76	56	41542	28	1	17	10	28
ASE_00396	RNaseP_bact_a links to Rfam database...	0.47	0.46	0.48	38	41536	46	8	34	4	45
ASE_00397	RNaseP_bact_a links to Rfam database...	0.51	0.47	0.55	49	54526	41	4	36	1	56
ASE_00398	RNaseP_bact_a links to Rfam database...	0.39	0.38	0.40	39	55847	61	6	53	2	65
ASE_00400	RNaseP_bact_a links to Rfam database...	0.54	0.53	0.54	56	57867	48	7	40	1	50
ASE_00401	RNaseP_bact_a links to Rfam database...	0.54	0.52	0.56	65	76912	53	7	44	2	61
ASE_00402	RNaseP_bact_a links to Rfam database...	0.59	0.55	0.64	47	42412	29	7	20	2	38
ASE_00403	RNaseP_bact_a links to Rfam database...	0.24	0.22	0.27	24	55855	70	4	62	4	83
ASE_00404	RNaseP_bact_a links to Rfam database...	0.17	0.16	0.18	14	42992	70	4	61	5	71
ASE_00406	RNaseP_bact_a links to Rfam database...	0.56	0.54	0.57	51	48739	49	2	36	11	43
ASE_00408	-	0.42	0.39	0.46	28	32324	39	3	30	6	43
ASE_00409	-	0.30	0.29	0.32	24	40965	57	6	46	5	59
ASE_00411	RNaseP_bact_a links to Rfam database...	0.27	0.27	0.27	24	49367	65	7	57	1	65
ASE_00412	RNaseP_bact_a links to Rfam database...	0.26	0.25	0.27	26	58215	71	9	61	1	79
ASE_00413	RNaseP_bact_a links to Rfam database...	0.48	0.48	0.49	39	44471	45	1	40	4	42
ASE_00414	RNaseP_bact_a links to Rfam database...	0.24	0.23	0.26	22	46276	65	0	62	3	73
ASE_00415	RNaseP_bact_a links to Rfam database...	0.62	0.59	0.65	61	54852	38	5	28	5	42
ASE_00416	RNaseP_bact_a links to Rfam database...	0.52	0.50	0.54	63	77304	57	5	49	3	64
ASE_00417	RNaseP_arch links to Rfam database...	0.36	0.37	0.36	37	54512	68	9	57	2	63
ASE_00418	RNaseP_arch links to Rfam database...	0.12	0.12	0.12	9	38703	71	10	59	2	66
ASE_00419	RNaseP_bact_a links to Rfam database...	0.75	0.71	0.78	73	54853	22	2	18	2	30
ASE_00420	RNaseP_nuc links to Rfam database...	0.73	0.75	0.72	47	43300	47	3	15	29	16
ASE_00422	RNaseP_bact_a links to Rfam database...	0.63	0.61	0.65	57	46883	38	3	28	7	37
ASE_00423	RNaseP_bact_a links to Rfam database...	0.36	0.35	0.38	38	56853	62	6	56	0	71
ASE_00426	RNaseP_bact_a links to Rfam database...	0.50	0.51	0.50	55	60965	55	10	45	0	53
ASE_00427	RNaseP_nuc links to Rfam database...	0.11	0.13	0.09	6	40688	71	32	29	10	40
ASE_00428	RNaseP_bact_a links to Rfam database...	0.54	0.51	0.57	64	76523	52	6	43	3	61
ASE_00429	-	0.64	0.59	0.68	39	28146	21	3	15	3	27
ASE_00430	RNaseP_bact_a links to Rfam database...	0.64	0.62	0.67	60	46881	36	1	29	6	37
ASE_00431	RNaseP_bact_a links to Rfam database...	0.58	0.52	0.64	49	46284	34	1	26	7	46
ASE_00434	RNaseP_bact_b links to Rfam database...	0.78	0.71	0.85	78	68173	28	1	13	14	32
ASE_00437	RNaseP_bact_a links to Rfam database...	0.45	0.42	0.48	57	79283	62	1	60	1	78
ASE_00438	RNaseP_bact_a links to Rfam database...	0.42	0.39	0.46	45	65968	53	1	52	0	71
ASE_00441	RNaseP_bact_a links to Rfam database...	0.73	0.65	0.81	73	64171	21	6	11	4	39
ASE_00443	RNaseP_nuc links to Rfam database...	0.95	0.92	0.98	46	26749	32	0	1	31	4
ASE_00447	RNaseP_bact_a links to Rfam database...	0.70	0.65	0.75	75	60278	31	4	21	6	41
ASE_00448	RNaseP_bact_a links to Rfam database...	0.37	0.34	0.40	38	64167	62	5	51	6	74
ASE_00451	RNaseP_bact_a links to Rfam database...	0.37	0.35	0.40	44	70766	67	2	64	1	81
ASE_00452	-	0.28	0.33	0.24	13	20855	52	10	32	10	26
ASE_00453	-	0.47	0.50	0.44	26	34132	46	7	26	13	26
ASE_00454	RNaseP_nuc links to Rfam database...	0.59	0.60	0.58	38	43300	50	2	25	23	25
CRW_00010	-	0.57	0.58	0.57	73	102703	64	14	41	9	53
CRW_00011	-	0.65	0.67	0.64	92	118198	57	9	42	6	46
CRW_00013	Intron_gpI links to Rfam database...	0.10	0.10	0.11	11	103641	107	9	79	19	104
CRW_00014	-	0.48	0.48	0.48	59	103617	70	12	52	6	64
CRW_00016	Intron_gpI links to Rfam database...	0.66	0.61	0.72	73	77320	38	5	23	10	47
CRW_00017	-	0.27	0.29	0.25	26	92131	104	22	56	26	65
CRW_00608	-	0.72	0.67	0.77	53	35709	16	1	15	0	26
CRW_00610	Intron_gpI links to Rfam database...	0.50	0.48	0.51	39	36239	38	6	31	1	42
CRW_00611	-	0.76	0.73	0.80	55	31306	21	4	10	7	20
CRW_00613	Intron_gpI links to Rfam database...	0.81	0.73	0.89	57	34916	15	0	7	8	21
CRW_00614	Intron_gpI links to Rfam database...	0.07	0.09	0.06	5	121689	132	26	51	55	52
CRW_00618	Intron_gpI links to Rfam database...	0.37	0.39	0.34	24	56210	60	15	31	14	37
CRW_00626	-	0.61	0.64	0.59	67	100911	62	9	38	15	37
CRW_00629	-	0.47	0.45	0.48	55	91264	60	11	48	1	67
CRW_00632	-	0.81	0.77	0.84	99	82910	24	7	12	5	29
CRW_00633	Intron_gpI links to Rfam database...	0.74	0.72	0.77	76	63447	26	8	15	3	30
CRW_00634	Intron_gpI links to Rfam database...	0.44	0.41	0.47	39	64537	48	18	26	4	55
CRW_00635	-	0.36	0.36	0.36	49	109142	90	15	72	3	88
CRW_00636	-	0.38	0.37	0.40	53	114826	84	18	63	3	90
CRW_00641	-	0.60	0.59	0.60	45	39828	38	6	24	8	31
CRW_00642	-	0.37	0.42	0.34	27	47198	62	15	38	9	38
CRW_00643	-	0.37	0.42	0.34	51	123104	111	29	72	10	71
CRW_00645	-	0.42	0.42	0.43	28	35446	45	10	27	8	39
CRW_00646	-	0.51	0.53	0.49	34	34910	38	7	29	2	30
CRW_00650	-	0.51	0.51	0.51	72	112908	74	10	60	4	70
CRW_00651	-	0.58	0.60	0.55	73	99996	65	11	48	6	48
CRW_00653	-	0.71	0.69	0.73	93	94703	37	2	32	3	41
CRW_00654	-	0.76	0.71	0.81	88	78101	25	4	17	4	36
CRW_00655	-	0.65	0.62	0.69	77	89141	36	7	28	1	47
CRW_00656	-	0.40	0.38	0.42	49	90407	75	10	59	6	80
CRW_00657	-	0.69	0.70	0.68	95	105890	50	7	38	5	41
CRW_00658	-	0.41	0.40	0.41	41	74592	58	12	46	0	61
CRW_00659	-	0.45	0.48	0.43	29	32317	48	8	31	9	32
CRW_00660	-	0.53	0.53	0.52	32	22094	30	5	24	1	28
CRW_00661	-	0.09	0.10	0.08	5	24247	61	20	38	3	46
CRW_00662	-	0.13	0.14	0.12	9	28606	71	8	57	6	56
CRW_00663	-	0.19	0.20	0.18	12	26041	59	7	46	6	49
CRW_00664	-	0.37	0.38	0.36	30	53544	61	12	42	7	48
CRW_00665	-	0.00	0.00	0.00	0	23592	62	16	45	1	48
CRW_00666	-	0.38	0.37	0.39	47	96019	85	8	67	10	79
CRW_00669	-	0.48	0.48	0.49	57	97344	61	18	42	1	62
CRW_00670	Intron_gpI links to Rfam database...	0.54	0.53	0.55	63	70011	53	6	45	2	57
CRW_00671	Intron_gpI links to Rfam database...	0.66	0.59	0.74	69	62742	28	5	19	4	48
CRW_00672	Intron_gpI links to Rfam database...	0.52	0.50	0.56	55	72291	48	9	35	4	56
CRW_00673	-	0.63	0.67	0.59	70	100010	50	28	20	2	35
CRW_00674	Intron_gpI links to Rfam database...	0.43	0.42	0.44	52	83319	69	14	51	4	72
CRW_00676	Intron_gpI links to Rfam database...	0.30	0.30	0.31	35	93414	85	9	70	6	80
CRW_00677	-	0.57	0.60	0.55	63	71895	55	14	38	3	42
CRW_00679	-	0.38	0.39	0.38	42	76525	71	18	51	2	65
CRW_00681	-	0.28	0.29	0.26	33	112925	97	30	62	5	79
CRW_00686	-	0.36	0.33	0.39	41	95162	76	4	59	13	84
CRW_00687	-	0.54	0.56	0.51	37	28608	37	8	27	2	29
CRW_00688	-	0.61	0.60	0.63	34	21891	22	0	20	2	23
CRW_00689	-	0.43	0.43	0.44	33	33595	47	7	35	5	44
CRW_00690	-	0.66	0.67	0.65	46	33340	29	9	16	4	23
CRW_00691	-	0.71	0.72	0.70	48	27192	25	4	17	4	19
CRW_00692	Intron_gpI links to Rfam database...	0.26	0.27	0.25	24	68538	77	23	50	4	66
CRW_00693	-	0.69	0.70	0.67	86	89124	51	9	34	8	36
CRW_00694	-	0.60	0.61	0.60	74	85782	52	9	40	3	48
CRW_00699	-	0.27	0.25	0.28	32	91692	82	12	70	0	94
CRW_00703	-	0.25	0.27	0.23	18	40390	66	14	48	4	48
CRW_00715	-	0.53	0.53	0.54	55	69276	49	6	41	2	49
CRW_00721	-	0.37	0.38	0.36	26	58581	61	14	32	15	42
PDB_00078	-	0.68	0.63	0.73	73	49670	27	9	18	0	42
PDB_00079	-	0.48	0.44	0.53	62	121653	64	17	39	8	80
PDB_00278	-	0.61	0.57	0.65	41	24913	22	4	18	0	31
PDB_00398	-	0.25	0.26	0.25	27	71900	90	16	67	7	76
PDB_00403	-	0.53	0.52	0.54	79	124604	74	11	56	7	74
PDB_00423	-	0.55	0.50	0.61	37	26735	24	4	20	0	37
PDB_00528	-	0.44	0.45	0.44	46	45952	58	0	58	0	57
PDB_00555	-	0.49	0.44	0.54	39	25353	34	0	33	1	49
PDB_00601	-	0.49	0.44	0.55	35	36251	33	7	22	4	44
PDB_00701	-	0.11	0.11	0.12	12	45351	88	9	79	0	97
PDB_00739	-	0.35	0.36	0.35	24	25809	45	8	37	0	43
PDB_00747	-	0.57	0.48	0.68	38	24475	19	1	17	1	42
PDB_00827	Intron_gpI links to Rfam database...	0.68	0.59	0.79	48	26967	15	0	13	2	33
PDB_00917	-	0.60	0.57	0.64	54	35161	34	4	26	4	41
PDB_00919	RNaseP_bact_a links to Rfam database...	0.53	0.49	0.59	50	44168	38	3	32	3	53
PDB_00985	-	0.24	0.28	0.21	18	30544	76	9	57	10	46
PDB_01076	-	0.61	0.52	0.72	41	23379	23	1	15	7	38
PDB_01129	-	0.40	0.39	0.41	28	35443	44	12	28	4	43
PDB_01144	-	0.28	0.26	0.31	33	82921	80	7	67	6	94
PDB_01157	-	0.08	0.08	0.09	8	49999	81	10	69	2	90
PDB_01161	-	0.24	0.24	0.24	18	36781	58	7	50	1	57
PDB_01193	-	0.33	0.30	0.35	46	105900	87	6	78	3	105
RFA_00597	Telomerase-vert links to Rfam database...	0.34	0.37	0.31	40	97776	101	20	67	14	69
RFA_00598	Telomerase-vert links to Rfam database...	0.35	0.36	0.35	36	84563	76	12	55	9	65
RFA_00599	Telomerase-vert links to Rfam database...	0.39	0.40	0.38	44	101359	92	13	59	20	67
RFA_00600	Telomerase-vert links to Rfam database...	0.18	0.21	0.16	21	120164	129	29	81	19	79
RFA_00601	Telomerase-vert links to Rfam database...	0.09	0.10	0.08	11	99104	129	18	102	9	103
RFA_00602	Telomerase-vert links to Rfam database...	0.41	0.44	0.39	51	101343	91	19	62	10	65
RFA_00606	Telomerase-cil links to Rfam database...	0.32	0.33	0.32	13	21280	34	12	16	6	26
RFA_00616	-	0.57	0.54	0.60	21	22970	31	4	10	17	18
RFA_00618	-	0.18	0.18	0.18	7	22965	37	7	26	4	32
RFA_00619	-	0.41	0.44	0.40	17	22748	37	8	18	11	22
RFA_00620	Telomerase-cil links to Rfam database...	0.36	0.38	0.34	15	21901	37	4	25	8	24
RFA_00621	RNase_MRP links to Rfam database...	0.17	0.18	0.16	14	46274	84	4	68	12	62
RFA_00623	RNase_MRP links to Rfam database...	0.34	0.33	0.35	26	43882	58	3	45	10	52
RFA_00624	RNase_MRP links to Rfam database...	0.34	0.34	0.33	21	30072	45	9	33	3	40
RFA_00626	rne5 links to Rfam database...	0.21	0.22	0.21	19	56526	76	15	56	5	68
RFA_00627	rne5 links to Rfam database...	0.42	0.40	0.44	35	56873	47	13	32	2	52
RFA_00628	rne5 links to Rfam database...	0.42	0.41	0.43	35	57209	50	7	40	3	51
RFA_00630	rne5 links to Rfam database...	0.63	0.63	0.63	55	56865	41	6	27	8	32
RFA_00639	7SK links to Rfam database...	0.37	0.39	0.36	34	54520	66	13	48	5	53
RFA_00814	R2_retro_el links to Rfam database...	0.79	0.80	0.77	33	25157	21	0	10	11	8
RFA_00815	R2_retro_el links to Rfam database...	0.56	0.59	0.53	24	24486	27	1	20	6	17
RFA_00816	R2_retro_el links to Rfam database...	0.82	0.85	0.80	35	23176	12	4	5	3	6
RFA_00817	R2_retro_el links to Rfam database...	0.35	0.39	0.31	16	21894	39	9	26	4	25
RFA_00818	R2_retro_el links to Rfam database...	0.28	0.27	0.29	11	20263	30	12	15	3	30
RFA_00819	R2_retro_el links to Rfam database...	0.30	0.29	0.31	12	27927	50	4	23	23	29
SRP_00002	Metazoa_SRP links to Rfam database...	0.41	0.38	0.44	39	45062	50	10	39	1	63
SRP_00003	-	0.69	0.71	0.67	68	45954	36	14	20	2	28
SRP_00006	Metazoa_SRP links to Rfam database...	0.14	0.13	0.15	13	45669	73	3	68	2	88
SRP_00009	Plant_SRP links to Rfam database...	0.48	0.47	0.49	48	46568	50	8	41	1	54
SRP_00011	Plant_SRP links to Rfam database...	0.29	0.26	0.32	27	46276	57	2	55	0	77
SRP_00012	Plant_SRP links to Rfam database...	0.41	0.39	0.45	39	46273	48	12	36	0	62
SRP_00015	Plant_SRP links to Rfam database...	0.52	0.48	0.56	48	46274	39	0	38	1	51
SRP_00016	Archaea_SRP links to Rfam database...	0.49	0.49	0.50	53	47789	54	4	49	1	56
SRP_00018	Fungi_SRP links to Rfam database...	0.47	0.43	0.51	35	38435	38	5	28	5	46
SRP_00019	Fungi_SRP links to Rfam database...	0.20	0.19	0.22	17	35967	66	10	52	4	74
SRP_00023	-	0.00	0.00	0.00	0	20864	46	11	35	0	35
SRP_00024	Bacteria_large_SRP links to Rfam database...	0.48	0.46	0.51	40	37596	40	2	37	1	47
SRP_00026	Bacteria_large_SRP links to Rfam database...	0.45	0.42	0.47	37	36778	46	2	39	5	51
SRP_00027	Bacteria_large_SRP links to Rfam database...	0.41	0.39	0.43	34	37048	46	7	39	0	53
SRP_00030	Bacteria_large_SRP links to Rfam database...	0.40	0.38	0.43	33	36780	44	6	37	1	55
SRP_00031	Bacteria_large_SRP links to Rfam database...	0.40	0.38	0.43	34	36236	45	2	43	0	55
SRP_00037	Bacteria_large_SRP links to Rfam database...	0.33	0.30	0.36	26	36513	46	4	42	0	61
SRP_00050	Metazoa_SRP links to Rfam database...	0.52	0.49	0.55	49	44761	40	4	36	0	50
SRP_00053	Metazoa_SRP links to Rfam database...	0.68	0.63	0.75	59	45071	26	3	17	6	35
SRP_00060	Metazoa_SRP links to Rfam database...	0.77	0.75	0.79	75	44456	24	1	19	4	25
SRP_00061	Metazoa_SRP links to Rfam database...	0.78	0.76	0.81	76	44756	22	3	15	4	24
SRP_00066	Metazoa_SRP links to Rfam database...	0.00	0.00	0.00	0	45360	91	8	83	0	100
SRP_00069	Fungi_SRP links to Rfam database...	0.47	0.45	0.49	38	34375	42	3	37	2	47
SRP_00073	Fungi_SRP links to Rfam database...	0.34	0.34	0.34	24	38989	58	13	34	11	47
SRP_00076	-	0.00	0.00	0.00	0	25354	76	20	51	5	39
SRP_00079	Plant_SRP links to Rfam database...	0.42	0.41	0.44	36	41823	55	1	45	9	52
SRP_00085	Plant_SRP links to Rfam database...	0.38	0.38	0.38	38	45352	63	8	53	2	63
SRP_00086	Metazoa_SRP links to Rfam database...	0.70	0.64	0.77	64	44170	21	1	18	2	36
SRP_00087	Fungi_SRP links to Rfam database...	0.06	0.07	0.05	4	37321	77	23	53	1	54
SRP_00088	Bacteria_large_SRP links to Rfam database...	0.53	0.52	0.54	46	34106	39	4	35	0	43
SRP_00089	Bacteria_large_SRP links to Rfam database...	0.76	0.70	0.82	63	35701	14	1	13	0	27
SRP_00090	Bacteria_large_SRP links to Rfam database...	0.18	0.17	0.21	15	35439	58	7	50	1	75
SRP_00091	Fungi_SRP links to Rfam database...	0.64	0.64	0.65	61	52881	36	9	24	3	34
SRP_00099	Plant_SRP links to Rfam database...	0.44	0.43	0.45	41	44759	50	6	44	0	54
SRP_00102	Metazoa_SRP links to Rfam database...	0.32	0.31	0.34	31	44460	60	6	54	0	70
SRP_00103	Metazoa_SRP links to Rfam database...	0.05	0.05	0.06	5	45362	84	7	77	0	97
SRP_00104	Fungi_SRP links to Rfam database...	0.31	0.33	0.29	23	34373	61	9	48	4	46
SRP_00108	-	0.14	0.14	0.15	10	38435	63	9	49	5	60
SRP_00117	Metazoa_SRP links to Rfam database...	0.35	0.31	0.39	32	45369	53	2	48	3	70
SRP_00118	-	0.33	0.33	0.33	31	39246	64	5	58	1	64
SRP_00120	-	0.58	0.52	0.64	45	37331	25	3	22	0	41
SRP_00123	Metazoa_SRP links to Rfam database...	0.40	0.38	0.42	35	36501	49	3	46	0	56
SRP_00124	Metazoa_SRP links to Rfam database...	0.43	0.40	0.46	34	37054	43	6	34	3	51
SRP_00125	-	0.52	0.50	0.55	54	50304	50	6	39	5	53
SRP_00127	Fungi_SRP links to Rfam database...	0.50	0.50	0.50	60	72270	60	8	52	0	59
SRP_00130	Archaea_SRP links to Rfam database...	0.54	0.52	0.56	50	49681	44	3	36	5	47
SRP_00136	Fungi_SRP links to Rfam database...	0.28	0.30	0.26	21	44172	67	12	48	7	50
SRP_00142	Archaea_SRP links to Rfam database...	0.14	0.14	0.14	13	45961	82	8	74	0	80
SRP_00143	Archaea_SRP links to Rfam database...	0.54	0.53	0.56	54	49673	48	2	41	5	47
SRP_00144	Archaea_SRP links to Rfam database...	0.64	0.65	0.64	61	46569	37	4	31	2	33
SRP_00148	Fungi_SRP links to Rfam database...	0.30	0.30	0.31	26	50002	64	11	47	6	61
SRP_00152	Plant_SRP links to Rfam database...	0.44	0.44	0.45	45	45654	54	11	43	0	58
SRP_00153	Plant_SRP links to Rfam database...	0.75	0.71	0.78	76	46874	23	6	15	2	31
SRP_00157	Fungi_SRP links to Rfam database...	0.32	0.33	0.31	24	44176	62	13	40	9	48
SRP_00158	Fungi_SRP links to Rfam database...	0.38	0.44	0.33	51	124096	107	42	62	3	64
SRP_00160	Fungi_SRP links to Rfam database...	0.58	0.54	0.63	70	86208	44	8	34	2	60
SRP_00167	-	0.12	0.12	0.13	10	38703	68	10	58	0	74
SRP_00168	-	0.13	0.13	0.14	12	38693	76	7	69	0	79
SRP_00171	Metazoa_SRP links to Rfam database...	0.21	0.20	0.22	18	45368	65	8	57	0	70
SRP_00172	-	0.16	0.16	0.16	15	38967	78	9	69	0	76
SRP_00173	Bacteria_large_SRP links to Rfam database...	0.73	0.70	0.76	63	38143	22	5	15	2	27
SRP_00174	Bacteria_large_SRP links to Rfam database...	0.33	0.31	0.35	27	38704	50	7	43	0	59
SRP_00175	Fungi_SRP links to Rfam database...	0.12	0.11	0.13	9	44484	60	13	45	2	75
SRP_00178	Plant_SRP links to Rfam database...	0.19	0.18	0.21	18	45666	69	8	61	0	84
SRP_00179	Plant_SRP links to Rfam database...	0.46	0.43	0.51	45	45967	47	6	38	3	60
SRP_00180	-	0.57	0.57	0.56	31	22523	30	10	14	6	23
SRP_00181	Plant_SRP links to Rfam database...	0.19	0.18	0.20	18	45968	70	1	69	0	84
SRP_00182	Plant_SRP links to Rfam database...	0.70	0.69	0.71	70	45957	32	7	22	3	31
SRP_00184	Plant_SRP links to Rfam database...	0.00	0.00	0.00	0	45961	95	9	86	0	100
SRP_00188	Plant_SRP links to Rfam database...	0.18	0.18	0.18	14	31046	65	10	55	0	65
SRP_00197	Archaea_SRP links to Rfam database...	0.21	0.20	0.22	20	49363	73	10	62	1	81
SRP_00198	Archaea_SRP links to Rfam database...	0.08	0.08	0.09	8	50954	78	7	71	0	95
SRP_00199	Archaea_SRP links to Rfam database...	0.13	0.11	0.14	12	50956	72	6	66	0	93
SRP_00201	Archaea_SRP links to Rfam database...	0.73	0.72	0.74	80	47787	30	2	26	2	31
SRP_00202	Archaea_SRP links to Rfam database...	0.88	0.89	0.88	104	54167	15	5	9	1	13
SRP_00203	Archaea_SRP links to Rfam database...	0.73	0.74	0.71	78	48718	39	2	30	7	27
SRP_00204	Archaea_SRP links to Rfam database...	0.80	0.77	0.83	79	49046	17	5	11	1	23
SRP_00206	Archaea_SRP links to Rfam database...	0.76	0.72	0.80	78	47797	21	7	13	1	30
SRP_00208	Archaea_SRP links to Rfam database...	0.61	0.58	0.64	59	46573	35	6	27	2	42
SRP_00228	Metazoa_SRP links to Rfam database...	0.41	0.38	0.46	36	45372	45	2	41	2	59
SRP_00230	Fungi_SRP links to Rfam database...	0.51	0.49	0.54	44	39540	39	4	33	2	46
SRP_00234	Bacteria_large_SRP links to Rfam database...	0.34	0.34	0.34	29	36230	60	5	51	4	57
SRP_00239	Plant_SRP links to Rfam database...	0.26	0.27	0.26	25	50306	72	18	54	0	68
SRP_00240	Plant_SRP links to Rfam database...	0.28	0.27	0.28	28	48105	74	8	64	2	74
SRP_00241	Plant_SRP links to Rfam database...	0.30	0.30	0.29	25	45971	62	12	48	2	57
SRP_00246	-	0.39	0.39	0.39	29	40966	53	6	40	7	45
SRP_00247	Metazoa_SRP links to Rfam database...	0.31	0.31	0.31	27	47190	61	12	49	0	60
SRP_00252	Metazoa_SRP links to Rfam database...	0.39	0.40	0.37	36	49044	62	19	42	1	53
SRP_00253	Metazoa_SRP links to Rfam database...	0.41	0.42	0.40	38	49361	62	8	48	6	52
SRP_00254	Fungi_SRP links to Rfam database...	0.12	0.11	0.13	7	32329	51	13	36	2	54
SRP_00255	Archaea_SRP links to Rfam database...	0.26	0.28	0.25	26	47484	76	14	62	0	68
SRP_00257	Metazoa_SRP links to Rfam database...	0.44	0.40	0.49	43	50953	45	7	37	1	65
SRP_00260	Metazoa_SRP links to Rfam database...	0.56	0.52	0.61	52	47810	36	7	26	3	48
SRP_00261	-	0.65	0.63	0.68	65	45356	30	6	24	0	39
SRP_00262	-	0.42	0.39	0.47	39	48433	45	5	39	1	62
SRP_00263	-	0.63	0.58	0.70	60	48430	26	3	23	0	44
SRP_00265	Fungi_SRP links to Rfam database...	0.25	0.27	0.24	20	41243	71	15	50	6	53
SRP_00267	Metazoa_SRP links to Rfam database...	0.85	0.85	0.85	82	44455	16	3	11	2	14
SRP_00276	Archaea_SRP links to Rfam database...	0.54	0.54	0.55	59	50614	49	8	40	1	51
SRP_00278	Archaea_SRP links to Rfam database...	0.75	0.74	0.76	78	45953	28	5	20	3	27
SRP_00282	Metazoa_SRP links to Rfam database...	0.00	0.00	0.00	0	43279	86	22	64	0	63
SRP_00290	Fungi_SRP links to Rfam database...	0.63	0.61	0.64	83	100446	51	5	42	4	52
SRP_00299	Metazoa_SRP links to Rfam database...	0.27	0.25	0.28	25	44165	65	2	61	2	74
SRP_00300	Metazoa_SRP links to Rfam database...	0.35	0.33	0.38	31	44172	50	6	44	0	63
SRP_00301	Fungi_SRP links to Rfam database...	0.28	0.27	0.31	23	32565	52	6	46	0	63
SRP_00302	Fungi_SRP links to Rfam database...	0.18	0.19	0.17	15	41529	74	14	58	2	66
SRP_00308	Bacteria_large_SRP links to Rfam database...	0.45	0.42	0.48	37	36238	40	5	35	0	51
SRP_00317	Metazoa_SRP links to Rfam database...	0.57	0.52	0.63	51	45069	32	1	29	2	47
SRP_00321	Archaea_SRP links to Rfam database...	0.62	0.62	0.63	67	47479	42	8	32	2	41
SRP_00322	Archaea_SRP links to Rfam database...	0.68	0.69	0.68	75	48405	36	4	32	0	34
SRP_00323	Archaea_SRP links to Rfam database...	0.60	0.61	0.60	65	47169	46	4	40	2	42
SRP_00328	Metazoa_SRP links to Rfam database...	0.49	0.49	0.49	42	39536	43	10	33	0	43
SRP_00329	Metazoa_SRP links to Rfam database...	0.38	0.38	0.40	32	39822	50	8	41	1	53
SRP_00330	Archaea_SRP links to Rfam database...	0.10	0.11	0.10	10	49988	88	11	77	0	85
SRP_00331	Metazoa_SRP links to Rfam database...	0.50	0.47	0.53	41	37598	36	4	32	0	46
SRP_00332	Archaea_SRP links to Rfam database...	0.49	0.50	0.49	53	50295	56	3	52	1	53
SRP_00335	Bacteria_large_SRP links to Rfam database...	0.19	0.26	0.15	10	35178	77	23	34	20	29
SRP_00336	-	0.10	0.10	0.11	8	38986	67	8	58	1	69
SRP_00337	Bacteria_large_SRP links to Rfam database...	0.81	0.78	0.85	71	35427	14	1	12	1	20
SRP_00339	Archaea_SRP links to Rfam database...	0.43	0.44	0.43	41	44455	55	8	47	0	53
SRP_00340	Metazoa_SRP links to Rfam database...	0.48	0.50	0.46	41	41238	51	9	40	2	41
SRP_00345	-	0.25	0.27	0.23	14	20646	52	10	36	6	38
SRP_00347	Metazoa_SRP links to Rfam database...	0.31	0.30	0.32	29	46575	64	8	53	3	67
SRP_00348	-	0.39	0.37	0.41	36	46884	51	7	44	0	62
SRP_00353	-	0.46	0.43	0.49	43	37862	45	4	41	0	57
SRP_00354	-	0.38	0.37	0.40	34	38697	52	4	46	2	59
SRP_00355	-	0.44	0.43	0.47	41	41817	48	4	43	1	55
SRP_00361	Plant_SRP links to Rfam database...	0.52	0.48	0.56	43	41828	37	5	29	3	47
SRP_00368	Metazoa_SRP links to Rfam database...	0.42	0.40	0.45	39	43869	50	7	41	2	59
SRP_00371	Fungi_SRP links to Rfam database...	0.32	0.32	0.33	26	36235	56	9	45	2	56
TMR_00007	tmRNA links to Rfam database...	0.34	0.32	0.36	35	61679	67	14	48	5	73
TMR_00008	tmRNA links to Rfam database...	0.36	0.36	0.37	38	65964	71	12	52	7	68
TMR_00010	tmRNA links to Rfam database...	0.35	0.35	0.35	34	57873	63	7	56	0	62
TMR_00012	tmRNA links to Rfam database...	0.31	0.31	0.32	25	64541	72	12	42	18	56
TMR_00014	tmRNA links to Rfam database...	0.66	0.64	0.69	70	68534	41	12	19	10	40
TMR_00017	tmRNA links to Rfam database...	0.25	0.24	0.26	24	67070	73	5	62	6	78
TMR_00018	tmRNA links to Rfam database...	0.56	0.59	0.54	54	64520	48	15	31	2	38
TMR_00028	tmRNA links to Rfam database...	0.52	0.51	0.53	49	62743	45	5	38	2	48
TMR_00030	tmRNA links to Rfam database...	0.23	0.23	0.23	25	75746	88	12	72	4	86
TMR_00034	tmRNA links to Rfam database...	0.60	0.60	0.61	66	59923	47	6	36	5	44
TMR_00035	tmRNA links to Rfam database...	0.57	0.60	0.55	59	67788	59	11	38	10	39
TMR_00036	tmRNA links to Rfam database...	0.49	0.51	0.47	52	90415	64	13	45	6	49
TMR_00038	tmRNA links to Rfam database...	0.28	0.28	0.29	31	71145	81	15	62	4	79
TMR_00042	tmRNA links to Rfam database...	0.16	0.15	0.16	15	62744	81	8	68	5	83
TMR_00046	tmRNA links to Rfam database...	0.28	0.29	0.26	28	62729	78	15	63	0	68
TMR_00047	tmRNA links to Rfam database...	0.29	0.33	0.25	19	48439	70	23	35	12	38
TMR_00048	tmRNA links to Rfam database...	0.31	0.33	0.30	31	64876	75	16	57	2	64
TMR_00049	tmRNA links to Rfam database...	0.52	0.52	0.52	45	63103	52	7	35	10	42
TMR_00051	tmRNA links to Rfam database...	0.56	0.54	0.59	51	65616	49	3	33	13	43
TMR_00055	tmRNA links to Rfam database...	0.27	0.26	0.29	30	78898	78	13	62	3	84
TMR_00057	tmRNA links to Rfam database...	0.34	0.38	0.30	30	73820	83	23	47	13	49
TMR_00061	tmRNA links to Rfam database...	0.19	0.19	0.20	19	59589	84	9	68	7	80
TMR_00062	tmRNA links to Rfam database...	0.72	0.69	0.74	72	78509	40	8	17	15	32
TMR_00064	tmRNA links to Rfam database...	0.45	0.45	0.46	46	76927	55	18	37	0	57
TMR_00065	tmRNA links to Rfam database...	0.50	0.48	0.53	51	76540	46	14	31	1	55
TMR_00067	tmRNA links to Rfam database...	0.38	0.39	0.38	44	82100	73	11	60	2	70
TMR_00073	tmRNA links to Rfam database...	0.40	0.38	0.42	45	65597	62	6	55	1	72
TMR_00076	tmRNA links to Rfam database...	0.37	0.38	0.37	38	70773	75	8	57	10	62
TMR_00080	tmRNA links to Rfam database...	0.45	0.46	0.44	44	70400	57	19	37	1	52
TMR_00081	tmRNA links to Rfam database...	0.55	0.50	0.62	53	67075	33	9	24	0	53
TMR_00082	tmRNA links to Rfam database...	0.50	0.49	0.52	47	67805	48	11	33	4	49
TMR_00083	tmRNA links to Rfam database...	0.37	0.37	0.37	39	68159	71	11	56	4	66
TMR_00092	tmRNA links to Rfam database...	0.46	0.50	0.42	50	67409	72	15	54	3	51
TMR_00093	tmRNA links to Rfam database...	0.23	0.24	0.23	24	64157	80	14	66	0	78
TMR_00096	tmRNA links to Rfam database...	0.26	0.26	0.27	26	64883	71	11	60	0	74
TMR_00101	tmRNA links to Rfam database...	0.48	0.47	0.50	50	64161	55	8	42	5	57
TMR_00102	tmRNA links to Rfam database...	0.46	0.47	0.45	47	64156	61	17	41	3	54
TMR_00103	tmRNA links to Rfam database...	0.67	0.67	0.67	72	64153	37	7	29	1	36
TMR_00104	-	0.17	0.19	0.15	13	66709	77	22	51	4	57
TMR_00106	tmRNA links to Rfam database...	0.41	0.40	0.42	48	89985	67	21	46	0	72
TMR_00109	tmRNA links to Rfam database...	0.40	0.37	0.45	45	88309	63	9	47	7	77
TMR_00111	tmRNA links to Rfam database...	0.49	0.47	0.52	57	90415	61	7	46	8	65
TMR_00116	tmRNA links to Rfam database...	0.62	0.60	0.65	62	64885	45	3	30	12	42
TMR_00117	tmRNA links to Rfam database...	0.64	0.62	0.66	73	80090	46	4	33	9	45
TMR_00118	tmRNA links to Rfam database...	0.34	0.33	0.35	39	81295	73	5	67	1	81
TMR_00119	tmRNA links to Rfam database...	0.31	0.31	0.32	32	71910	73	9	59	5	72
TMR_00123	tmRNA links to Rfam database...	0.26	0.25	0.27	25	66338	71	4	63	4	76
TMR_00124	tmRNA links to Rfam database...	0.49	0.49	0.49	48	70403	61	12	37	12	50
TMR_00125	tmRNA links to Rfam database...	0.63	0.62	0.65	61	64167	37	6	27	4	38
TMR_00127	tmRNA links to Rfam database...	0.65	0.64	0.67	62	62742	31	13	18	0	35
TMR_00128	tmRNA links to Rfam database...	0.44	0.44	0.44	42	60979	56	11	43	2	54
TMR_00131	tmRNA links to Rfam database...	0.46	0.44	0.47	44	64886	57	11	39	7	55
TMR_00135	tmRNA links to Rfam database...	0.75	0.70	0.80	69	62749	23	6	11	6	30
TMR_00136	tmRNA links to Rfam database...	0.28	0.30	0.27	30	74579	88	13	69	6	71
TMR_00137	tmRNA links to Rfam database...	0.39	0.36	0.43	32	61000	48	8	35	5	57
TMR_00139	tmRNA links to Rfam database...	0.65	0.68	0.62	62	62028	47	20	18	9	29
TMR_00140	tmRNA links to Rfam database...	0.62	0.59	0.66	59	73831	37	7	23	7	41
TMR_00142	tmRNA links to Rfam database...	0.54	0.53	0.55	54	70778	56	10	34	12	48
TMR_00143	tmRNA links to Rfam database...	0.49	0.48	0.52	49	64525	56	9	37	10	54
TMR_00144	tmRNA links to Rfam database...	0.37	0.36	0.39	37	74209	64	11	48	5	66
TMR_00146	tmRNA links to Rfam database...	0.84	0.71	1.00	30	32101	23	0	0	23	12
TMR_00148	tmRNA links to Rfam database...	0.69	0.88	0.54	15	27702	48	9	4	35	2
TMR_00150	tmRNA links to Rfam database...	0.46	0.50	0.43	21	43022	50	10	18	22	21
TMR_00152	tmRNA links to Rfam database...	0.31	0.30	0.32	35	81296	83	8	67	8	80
TMR_00155	tmRNA links to Rfam database...	0.56	0.53	0.59	55	61683	45	4	34	7	49
TMR_00156	tmRNA links to Rfam database...	0.24	0.24	0.24	23	60282	77	19	54	4	74
TMR_00158	tmRNA links to Rfam database...	0.51	0.49	0.52	49	60632	49	4	41	4	50
TMR_00159	tmRNA links to Rfam database...	0.19	0.21	0.19	19	62026	83	19	64	0	73
TMR_00160	tmRNA links to Rfam database...	0.37	0.37	0.37	35	64525	70	15	45	10	60
TMR_00164	tmRNA links to Rfam database...	0.54	0.52	0.56	55	66697	51	4	39	8	51
TMR_00165	tmRNA links to Rfam database...	0.49	0.48	0.51	47	61683	55	11	35	9	50
TMR_00166	tmRNA links to Rfam database...	0.27	0.27	0.28	27	61679	78	7	63	8	74
TMR_00168	tmRNA links to Rfam database...	0.79	0.79	0.80	90	60962	24	6	17	1	24
TMR_00173	tmRNA links to Rfam database...	0.34	0.40	0.29	17	42137	64	19	22	23	25
TMR_00179	tmRNA links to Rfam database...	0.42	0.42	0.41	41	67062	65	10	48	7	57
TMR_00180	tmRNA links to Rfam database...	0.38	0.37	0.39	37	67067	63	19	38	6	62
TMR_00182	tmRNA links to Rfam database...	0.10	0.10	0.11	10	66339	87	10	71	6	92
TMR_00183	tmRNA links to Rfam database...	0.22	0.22	0.22	23	63087	85	12	68	5	80
TMR_00184	tmRNA links to Rfam database...	0.40	0.41	0.40	42	63084	68	6	58	4	60
TMR_00193	tmRNA links to Rfam database...	0.19	0.20	0.18	16	59251	80	20	53	7	64
TMR_00194	tmRNA links to Rfam database...	0.41	0.40	0.42	37	62746	55	11	41	3	56
TMR_00196	tmRNA links to Rfam database...	0.42	0.38	0.46	37	60995	51	6	37	8	60
TMR_00199	tmRNA links to Rfam database...	0.27	0.25	0.28	23	62754	62	18	40	4	69
TMR_00200	-	0.40	0.40	0.41	30	41542	54	8	36	10	45
TMR_00204	tmRNA links to Rfam database...	0.51	0.47	0.55	46	60294	47	7	31	9	51
TMR_00207	tmRNA links to Rfam database...	0.25	0.24	0.25	25	72291	81	7	67	7	78
TMR_00223	tmRNA links to Rfam database...	0.45	0.43	0.48	41	64175	49	12	33	4	54
TMR_00224	tmRNA links to Rfam database...	0.40	0.39	0.41	39	64884	62	10	47	5	62
TMR_00226	tmRNA links to Rfam database...	0.48	0.48	0.49	50	69648	61	10	43	8	55
TMR_00227	tmRNA links to Rfam database...	0.44	0.46	0.43	46	70018	65	12	49	4	55
TMR_00228	tmRNA links to Rfam database...	0.31	0.32	0.30	35	88294	89	22	59	8	73
TMR_00234	tmRNA links to Rfam database...	0.36	0.32	0.41	33	58915	53	9	39	5	69
TMR_00238	tmRNA links to Rfam database...	0.33	0.36	0.31	36	84549	87	16	65	6	65
TMR_00239	tmRNA links to Rfam database...	0.60	0.63	0.58	60	61672	47	11	33	3	36
TMR_00240	tmRNA links to Rfam database...	0.53	0.54	0.52	46	63101	49	13	30	6	39
TMR_00246	-	0.52	0.50	0.55	17	78179	97	3	11	83	17
TMR_00248	tmRNA links to Rfam database...	0.16	0.18	0.13	7	54232	77	20	26	31	31
TMR_00257	tmRNA links to Rfam database...	0.24	0.22	0.25	22	67073	67	13	53	1	76
TMR_00259	tmRNA links to Rfam database...	0.60	0.57	0.63	59	67802	38	11	24	3	44
TMR_00261	tmRNA links to Rfam database...	0.41	0.41	0.42	41	66698	56	12	44	0	60
TMR_00262	tmRNA links to Rfam database...	0.44	0.46	0.42	48	74191	66	19	47	0	56
TMR_00271	tmRNA links to Rfam database...	0.44	0.45	0.44	41	64168	61	6	46	9	50
TMR_00274	tmRNA links to Rfam database...	0.26	0.27	0.25	28	66683	91	13	71	7	77
TMR_00278	tmRNA links to Rfam database...	0.44	0.45	0.42	46	67787	72	5	58	9	56
TMR_00279	tmRNA links to Rfam database...	0.46	0.48	0.45	45	68905	63	10	46	7	49
TMR_00280	tmRNA links to Rfam database...	0.48	0.49	0.48	49	65963	67	6	48	13	52
TMR_00283	tmRNA links to Rfam database...	0.51	0.53	0.49	51	65237	56	14	39	3	45
TMR_00289	tmRNA links to Rfam database...	0.41	0.41	0.42	40	67065	67	11	45	11	58
TMR_00290	tmRNA links to Rfam database...	0.38	0.36	0.41	33	64181	48	11	36	1	59
TMR_00296	tmRNA links to Rfam database...	0.22	0.23	0.21	23	68898	88	19	66	3	75
TMR_00298	tmRNA links to Rfam database...	0.40	0.42	0.39	42	68157	72	11	55	6	59
TMR_00300	tmRNA links to Rfam database...	0.64	0.60	0.68	67	70401	42	3	29	10	45
TMR_00301	tmRNA links to Rfam database...	0.28	0.26	0.29	25	82130	66	12	48	6	71
TMR_00302	tmRNA links to Rfam database...	0.52	0.55	0.48	52	77313	71	20	36	15	42
TMR_00305	tmRNA links to Rfam database...	0.49	0.47	0.52	48	60983	50	9	35	6	54
TMR_00306	tmRNA links to Rfam database...	0.29	0.29	0.29	31	64155	81	7	68	6	75
TMR_00310	tmRNA links to Rfam database...	0.61	0.59	0.63	58	63811	42	6	28	8	40
TMR_00317	tmRNA links to Rfam database...	0.60	0.61	0.59	62	68160	47	13	30	4	40
TMR_00331	tmRNA links to Rfam database...	0.30	0.33	0.28	27	66697	85	11	60	14	55
TMR_00332	tmRNA links to Rfam database...	0.51	0.48	0.55	48	67073	45	7	33	5	51
TMR_00334	tmRNA links to Rfam database...	0.56	0.54	0.58	55	66700	48	8	32	8	46
TMR_00337	tmRNA links to Rfam database...	0.60	0.58	0.62	69	82917	43	12	30	1	50
TMR_00340	tmRNA links to Rfam database...	0.47	0.46	0.49	37	64185	59	3	36	20	44
TMR_00341	tmRNA links to Rfam database...	0.29	0.30	0.28	28	63091	73	17	54	2	64
TMR_00343	tmRNA links to Rfam database...	0.39	0.39	0.39	41	64876	67	10	53	4	64
TMR_00345	tmRNA links to Rfam database...	0.54	0.54	0.53	56	63798	49	12	37	0	48
TMR_00346	tmRNA links to Rfam database...	0.57	0.54	0.60	51	64176	38	9	25	4	43
TMR_00348	tmRNA links to Rfam database...	0.54	0.49	0.60	49	77339	50	7	26	17	50
TMR_00352	tmRNA links to Rfam database...	0.14	0.16	0.12	12	95168	106	29	57	20	63
TMR_00353	tmRNA links to Rfam database...	0.53	0.54	0.51	57	84143	64	23	32	9	48
TMR_00357	tmRNA links to Rfam database...	0.57	0.62	0.53	57	82921	57	23	27	7	35
TMR_00358	tmRNA links to Rfam database...	0.46	0.47	0.44	47	74972	65	20	39	6	52
TMR_00361	-	0.34	0.38	0.32	27	93443	62	20	38	4	45
TMR_00366	tmRNA links to Rfam database...	0.50	0.51	0.50	51	67794	55	15	36	4	49
TMR_00372	tmRNA links to Rfam database...	0.49	0.48	0.50	46	70408	56	10	36	10	50
TMR_00374	tmRNA links to Rfam database...	0.21	0.23	0.20	21	81706	88	18	65	5	71
TMR_00375	tmRNA links to Rfam database...	0.48	0.51	0.45	50	73425	71	17	44	10	48
TMR_00376	tmRNA links to Rfam database...	0.34	0.37	0.32	35	74582	81	20	54	7	60
TMR_00378	tmRNA links to Rfam database...	0.43	0.44	0.42	43	67793	60	13	47	0	54
TMR_00383	tmRNA links to Rfam database...	0.29	0.31	0.28	31	66683	83	12	69	2	69
TMR_00384	tmRNA links to Rfam database...	0.20	0.19	0.20	21	65599	91	7	76	8	87
TMR_00393	tmRNA links to Rfam database...	0.52	0.58	0.46	31	53234	61	17	19	25	22
TMR_00395	tmRNA links to Rfam database...	0.44	0.42	0.47	46	64522	56	8	44	4	63
TMR_00398	tmRNA links to Rfam database...	0.40	0.39	0.42	41	65244	60	6	50	4	65
TMR_00399	tmRNA links to Rfam database...	0.26	0.27	0.25	25	64879	79	17	59	3	69
TMR_00404	tmRNA links to Rfam database...	0.42	0.46	0.39	42	67419	67	21	46	0	50
TMR_00408	tmRNA links to Rfam database...	0.38	0.40	0.36	35	65969	72	16	46	10	53
TMR_00409	tmRNA links to Rfam database...	0.57	0.59	0.55	27	68586	66	5	17	44	19
TMR_00411	tmRNA links to Rfam database...	0.40	0.39	0.41	34	60993	54	13	35	6	53
TMR_00415	tmRNA links to Rfam database...	0.31	0.32	0.31	32	67057	75	13	59	3	69
TMR_00419	tmRNA links to Rfam database...	0.63	0.63	0.63	70	81698	60	19	23	18	41
TMR_00422	tmRNA links to Rfam database...	0.59	0.58	0.60	53	67808	48	6	29	13	39
TMR_00423	tmRNA links to Rfam database...	0.12	0.14	0.11	10	63816	87	19	58	10	63
TMR_00427	tmRNA links to Rfam database...	0.33	0.31	0.36	30	67445	60	9	44	7	67
TMR_00429	tmRNA links to Rfam database...	0.58	0.60	0.57	65	74577	51	13	36	2	44
TMR_00430	tmRNA links to Rfam database...	0.45	0.44	0.47	48	82519	56	17	37	2	61
TMR_00431	tmRNA links to Rfam database...	0.63	0.62	0.64	34	51950	52	7	12	33	21
TMR_00432	tmRNA links to Rfam database...	0.31	0.33	0.30	34	79687	80	9	70	1	70
TMR_00433	tmRNA links to Rfam database...	0.17	0.17	0.17	18	80092	90	13	77	0	88
TMR_00439	tmRNA links to Rfam database...	0.41	0.45	0.38	45	68518	82	19	53	10	56
TMR_00441	tmRNA links to Rfam database...	0.14	0.16	0.12	13	62019	102	19	77	6	70
TMR_00443	tmRNA links to Rfam database...	0.52	0.48	0.56	50	67071	42	9	31	2	54
TMR_00448	tmRNA links to Rfam database...	0.59	0.57	0.61	52	62043	40	3	30	7	40
TMR_00451	tmRNA links to Rfam database...	0.21	0.22	0.20	20	63448	82	16	62	4	69
TMR_00457	tmRNA links to Rfam database...	0.43	0.44	0.42	45	78500	63	11	50	2	57
TMR_00458	tmRNA links to Rfam database...	0.37	0.34	0.40	32	63465	53	15	34	4	61
TMR_00460	tmRNA links to Rfam database...	0.43	0.42	0.44	44	79302	62	8	47	7	62
TMR_00465	tmRNA links to Rfam database...	0.32	0.32	0.32	30	64166	69	19	46	4	64
TMR_00469	tmRNA links to Rfam database...	0.35	0.34	0.35	34	64524	67	5	57	5	66
TMR_00472	tmRNA links to Rfam database...	0.23	0.24	0.23	23	64519	86	16	62	8	74
TMR_00478	tmRNA links to Rfam database...	0.19	0.19	0.18	19	71905	91	15	71	5	80
TMR_00498	tmRNA links to Rfam database...	0.44	0.44	0.44	44	68905	68	14	43	11	55
TMR_00499	tmRNA links to Rfam database...	0.35	0.37	0.33	37	64509	79	6	68	5	62
TMR_00501	tmRNA links to Rfam database...	0.44	0.46	0.42	42	62381	60	14	44	2	50
TMR_00502	tmRNA links to Rfam database...	0.36	0.37	0.36	34	75372	75	8	52	15	59
TMR_00503	tmRNA links to Rfam database...	0.17	0.16	0.18	18	67795	83	5	78	0	93
TMR_00519	tmRNA links to Rfam database...	0.25	0.25	0.24	24	63091	77	12	63	2	71
TMR_00520	tmRNA links to Rfam database...	0.35	0.33	0.37	33	63100	66	11	46	9	66
TMR_00522	tmRNA links to Rfam database...	0.37	0.36	0.39	35	63100	62	5	50	7	62
TMR_00528	tmRNA links to Rfam database...	0.46	0.44	0.48	43	63100	58	12	35	11	54
TMR_00540	tmRNA links to Rfam database...	0.10	0.11	0.11	11	73432	101	12	81	8	93
TMR_00541	tmRNA links to Rfam database...	0.31	0.30	0.32	32	61675	76	8	61	7	73
TMR_00544	tmRNA links to Rfam database...	0.36	0.34	0.37	37	89577	73	10	52	11	71
TMR_00547	tmRNA links to Rfam database...	0.45	0.44	0.46	44	65246	51	7	44	0	56
TMR_00553	tmRNA links to Rfam database...	0.49	0.49	0.49	40	48123	47	15	27	5	41
TMR_00559	tmRNA links to Rfam database...	0.35	0.33	0.37	33	62391	63	7	50	6	68
TMR_00560	tmRNA links to Rfam database...	0.33	0.31	0.37	30	60993	57	5	47	5	68
TMR_00562	tmRNA links to Rfam database...	0.25	0.26	0.24	27	72660	86	14	70	2	75
TMR_00563	tmRNA links to Rfam database...	0.59	0.59	0.59	61	75363	48	13	29	6	42
TMR_00566	tmRNA links to Rfam database...	0.38	0.37	0.39	37	60631	58	9	49	0	63
TMR_00568	tmRNA links to Rfam database...	0.35	0.33	0.37	33	60637	62	7	49	6	66
TMR_00570	tmRNA links to Rfam database...	0.62	0.58	0.67	56	60295	35	3	24	8	41
TMR_00571	tmRNA links to Rfam database...	0.43	0.41	0.45	41	60635	57	9	41	7	58
TMR_00576	tmRNA links to Rfam database...	0.59	0.58	0.60	59	60280	46	12	27	7	43
TMR_00579	tmRNA links to Rfam database...	0.17	0.19	0.16	17	80496	100	21	67	12	73
TMR_00580	tmRNA links to Rfam database...	0.46	0.43	0.49	43	60638	48	5	40	3	57
TMR_00581	tmRNA links to Rfam database...	0.51	0.50	0.53	49	62388	49	11	33	5	49
TMR_00584	tmRNA links to Rfam database...	0.58	0.55	0.61	53	60988	42	5	29	8	44
TMR_00586	tmRNA links to Rfam database...	0.42	0.39	0.44	38	60989	53	9	39	5	59
TMR_00587	tmRNA links to Rfam database...	0.83	0.83	0.83	83	61325	23	4	13	6	17
TMR_00588	tmRNA links to Rfam database...	0.42	0.43	0.41	43	77316	70	13	49	8	58
TMR_00594	tmRNA links to Rfam database...	0.31	0.31	0.31	32	79297	74	12	60	2	72
TMR_00596	tmRNA links to Rfam database...	0.35	0.34	0.36	32	78120	71	13	45	13	63
TMR_00599	tmRNA links to Rfam database...	0.30	0.35	0.25	25	63091	75	29	45	1	47
TMR_00600	tmRNA links to Rfam database...	0.15	0.15	0.15	17	79688	95	10	85	0	98
TMR_00601	tmRNA links to Rfam database...	0.79	0.71	0.88	30	58962	47	1	3	43	12
TMR_00603	tmRNA links to Rfam database...	0.63	0.72	0.54	31	60321	70	10	16	44	12
TMR_00604	tmRNA links to Rfam database...	0.69	0.70	0.68	78	62720	38	6	31	1	34
TMR_00605	tmRNA links to Rfam database...	0.53	0.53	0.53	57	74197	55	22	29	4	51
TMR_00606	tmRNA links to Rfam database...	0.53	0.52	0.54	56	68903	56	6	41	9	51
TMR_00609	tmRNA links to Rfam database...	0.73	0.73	0.73	83	63433	36	6	24	6	30
TMR_00610	tmRNA links to Rfam database...	0.67	0.65	0.68	68	62028	40	7	25	8	36
TMR_00611	tmRNA links to Rfam database...	0.76	0.78	0.74	80	61317	33	8	20	5	22
TMR_00612	tmRNA links to Rfam database...	0.50	0.53	0.47	55	60609	62	9	53	0	49
TMR_00614	tmRNA links to Rfam database...	0.60	0.58	0.63	60	60980	42	2	33	7	44
TMR_00615	tmRNA links to Rfam database...	0.49	0.47	0.51	45	63815	45	14	29	2	51
TMR_00616	tmRNA links to Rfam database...	0.26	0.26	0.26	26	67061	78	9	65	4	73
TMR_00617	tmRNA links to Rfam database...	0.39	0.43	0.36	25	34646	47	16	29	2	33
TMR_00623	tmRNA links to Rfam database...	0.50	0.47	0.53	51	61328	48	5	41	2	57
TMR_00624	tmRNA links to Rfam database...	0.73	0.72	0.73	78	62374	31	13	16	2	30
TMR_00625	tmRNA links to Rfam database...	0.32	0.34	0.31	36	78887	84	18	62	4	70
TMR_00626	tmRNA links to Rfam database...	0.43	0.43	0.43	47	67787	68	4	58	6	62
TMR_00680	tmRNA links to Rfam database...	0.25	0.26	0.25	26	67790	80	19	61	0	73
TMR_00681	tmRNA links to Rfam database...	0.48	0.47	0.49	46	65973	51	8	39	4	51
TMR_00683	tmRNA links to Rfam database...	0.26	0.27	0.26	27	82923	92	17	61	14	73
TMR_00686	tmRNA links to Rfam database...	0.33	0.34	0.32	37	71138	82	17	61	4	71
TMR_00687	tmRNA links to Rfam database...	0.25	0.25	0.24	28	71515	92	13	75	4	83
TMR_00696	tmRNA links to Rfam database...	0.47	0.44	0.50	50	84978	63	10	40	13	64
TMR_00698	tmRNA links to Rfam database...	0.16	0.16	0.16	17	63081	92	21	71	0	87
TMR_00699	tmRNA links to Rfam database...	0.41	0.41	0.41	42	67059	60	11	49	0	60
TMR_00702	tmRNA links to Rfam database...	0.25	0.26	0.25	26	67055	83	7	73	3	74
TMR_00703	tmRNA links to Rfam database...	0.38	0.37	0.40	37	67435	58	5	51	2	62
TMR_00706	tmRNA links to Rfam database...	0.44	0.41	0.47	42	66341	48	8	39	1	61
TMR_00711	tmRNA links to Rfam database...	0.55	0.56	0.53	55	67793	55	12	36	7	43
TMR_00712	tmRNA links to Rfam database...	0.27	0.28	0.26	30	78491	85	18	67	0	79
TMR_00716	tmRNA links to Rfam database...	0.12	0.12	0.13	12	62741	86	6	76	4	88

^top

Matthews Correlation Coeffient, Sensitivity and Positive Predictive Value have been calculated based on the paper by Gardener & Giegerich, 2004.

Table of contents:

Overview

Performance plots

Performance of CentroidHomfold‑LAST - scored higher in this pairwise comparison

1. Total counts & total scores for CentroidHomfold‑LAST

2. Individual counts for CentroidHomfold‑LAST [ download as .csv ]

Performance of McQFold - scored lower in this pairwise comparison

1. Total counts & total scores for McQFold

2. Individual counts for McQFold [ download as .csv ]