CompaRNA - on-line benchmarks of RNA structure prediction methods

Laboratory of Structural Bioinformatics @ Adam Mickiewicz University in Poznan

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Overview

Metric	MaxExpect		RNAwolf
MCC	0.536	>	0.339
Average MCC ± 95% Confidence Intervals	0.536 ± 0.013	>	0.340 ± 0.011
Sensitivity	0.527	>	0.355
Positive Predictive Value	0.546	>	0.325
Total TP	43053	>	29006
Total TN	55989111	>	55978736
Total FP	43731	<	71656
Total FP CONTRA	6252	<	11064
Total FP INCONS	29498	<	49108
Total FP COMP	7981	<	11484
Total FN	38577	<	52624
P-value	3.56938820447e-08

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Performance plots

Comparison of performance of MaxExpect and RNAwolf. Positive Predictive Value (PPV) is plotted against sensitivity. Each dot represents a single test of each method. See tables below for raw data (individual counts for MaxExpect and RNAwolf).
Average Matthews Correlation Coefficients (MCC) with 95% confidence intervals (CIs) were plotted for different RNA families, for which at least 3 members were present in the benchmarking dataset. 'n' denotes the number of MCCs used to calculate the average and CI. See tables below for raw data (individual counts for MaxExpect and RNAwolf).
Comparison of average Matthews Correlation Coefficients (MCCs) for MaxExpect and RNAwolf. The whiskers correspond to 95% confidence intervals (CIs). 'n' denotes the number of MCCs used to calculate average MCCs and CIs. See tables below for raw data (individual counts for MaxExpect and RNAwolf).

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Performance of MaxExpect - scored higher in this pairwise comparison

1. Total counts & total scores for MaxExpect

Total Base Pair Counts
Total TP	43053
Total TN	55989111
Total FP	43731
Total FP CONTRA	6252
Total FP INCONS	29498
Total FP COMP	7981
Total FN	38577

Total Scores
MCC	0.536
Average MCC ± 95% Confidence Intervals	0.536 ± 0.013
Sensitivity	0.527
Positive Predictive Value	0.546
Nr of predictions	818

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2. Individual counts for MaxExpect [ download as .csv ]

RNA Chain	Rfam family	MCC	SENS	PPV	TP	TN	FP	FP CONTRA	FP INCONS	FP COMP	FN
ASE_00001	RNaseP_arch links to Rfam database...	0.63	0.61	0.66	46	34121	30	2	22	6	29
ASE_00002	RNaseP_arch links to Rfam database...	0.71	0.67	0.74	49	35445	20	2	15	3	24
ASE_00004	RNaseP_bact_a links to Rfam database...	0.71	0.69	0.74	67	47804	25	9	15	1	30
ASE_00005	RNaseP_bact_a links to Rfam database...	0.66	0.57	0.75	67	57881	28	0	22	6	50
ASE_00006	RNaseP_bact_a links to Rfam database...	0.55	0.55	0.55	51	47494	47	10	31	6	42
ASE_00007	RNaseP_bact_a links to Rfam database...	0.73	0.68	0.79	75	59590	27	0	20	7	35
ASE_00009	RNaseP_arch links to Rfam database...	0.36	0.34	0.38	23	26045	39	4	34	1	44
ASE_00010	RNaseP_bact_b links to Rfam database...	0.79	0.78	0.80	64	49690	30	3	13	14	18
ASE_00012	RNaseP_bact_a links to Rfam database...	0.50	0.44	0.57	54	73825	45	2	39	4	69
ASE_00014	RNaseP_arch links to Rfam database...	0.42	0.42	0.44	44	54184	65	2	55	8	62
ASE_00016	-	0.53	0.56	0.50	34	65998	97	6	28	63	27
ASE_00017	RNaseP_nuc links to Rfam database...	0.18	0.20	0.16	13	50959	82	24	44	14	51
ASE_00018	RNaseP_bact_a links to Rfam database...	0.54	0.51	0.57	69	80479	55	1	52	2	65
ASE_00020	RNaseP_bact_a links to Rfam database...	0.60	0.57	0.64	72	73807	43	6	35	2	54
ASE_00021	RNaseP_bact_a links to Rfam database...	0.60	0.54	0.68	86	104069	48	4	37	7	74
ASE_00022	RNaseP_bact_b links to Rfam database...	0.49	0.45	0.54	56	82924	54	4	44	6	68
ASE_00023	RNaseP_bact_a links to Rfam database...	0.66	0.65	0.68	82	84134	42	5	34	3	45
ASE_00024	-	0.87	0.80	0.95	56	29344	13	0	3	10	14
ASE_00025	RNaseP_nuc links to Rfam database...	0.28	0.30	0.27	21	78529	108	9	47	52	50
ASE_00026	RNaseP_bact_a links to Rfam database...	0.56	0.52	0.60	57	59590	43	2	36	5	53
ASE_00028	RNaseP_bact_b links to Rfam database...	0.72	0.69	0.76	87	84551	37	5	23	9	39
ASE_00029	RNaseP_bact_a links to Rfam database...	0.60	0.56	0.64	68	82922	40	5	33	2	54
ASE_00030	RNaseP_bact_a links to Rfam database...	0.64	0.60	0.69	87	85365	40	3	36	1	58
ASE_00031	RNaseP_bact_a links to Rfam database...	0.72	0.68	0.76	86	86623	35	1	26	8	40
ASE_00032	RNaseP_bact_a links to Rfam database...	0.56	0.55	0.57	65	80086	55	7	42	6	53
ASE_00033	RNaseP_bact_a links to Rfam database...	0.33	0.30	0.38	36	64885	61	3	56	2	85
ASE_00035	RNaseP_bact_a links to Rfam database...	0.39	0.36	0.42	42	70400	65	4	54	7	76
ASE_00036	RNaseP_bact_a links to Rfam database...	0.51	0.48	0.53	64	75734	60	8	49	3	68
ASE_00037	RNaseP_bact_a links to Rfam database...	0.45	0.40	0.50	44	59252	47	0	44	3	66
ASE_00038	RNaseP_bact_a links to Rfam database...	0.75	0.70	0.81	71	53540	25	2	15	8	30
ASE_00040	RNaseP_bact_a links to Rfam database...	0.53	0.50	0.56	66	78886	58	3	48	7	67
ASE_00041	RNaseP_bact_a links to Rfam database...	0.45	0.42	0.48	45	57536	52	4	45	3	63
ASE_00042	RNaseP_bact_a links to Rfam database...	0.48	0.46	0.52	66	89972	66	2	60	4	79
ASE_00044	RNaseP_bact_a links to Rfam database...	0.74	0.73	0.74	77	54511	32	4	23	5	28
ASE_00045	RNaseP_bact_b links to Rfam database...	0.65	0.65	0.66	52	47199	34	6	21	7	28
ASE_00046	RNaseP_bact_a links to Rfam database...	0.66	0.57	0.76	59	50325	21	0	19	2	44
ASE_00047	RNaseP_bact_a links to Rfam database...	0.59	0.56	0.61	73	74186	47	2	44	1	57
ASE_00052	RNaseP_bact_a links to Rfam database...	0.59	0.52	0.67	58	61338	35	3	26	6	54
ASE_00053	RNaseP_bact_a links to Rfam database...	0.63	0.59	0.68	79	79284	44	3	35	6	54
ASE_00056	-	0.53	0.44	0.63	32	30825	23	2	17	4	40
ASE_00057	RNaseP_bact_a links to Rfam database...	0.61	0.60	0.61	81	82082	56	8	44	4	53
ASE_00064	RNaseP_bact_a links to Rfam database...	0.39	0.39	0.38	35	45359	64	6	51	7	54
ASE_00066	RNaseP_bact_a links to Rfam database...	0.54	0.52	0.58	67	72274	51	1	48	2	63
ASE_00068	RNaseP_bact_a links to Rfam database...	0.62	0.56	0.69	48	37605	27	2	20	5	37
ASE_00069	RNaseP_bact_a links to Rfam database...	0.66	0.62	0.70	87	82903	41	5	33	3	53
ASE_00074	RNaseP_bact_a links to Rfam database...	0.52	0.51	0.54	61	67782	55	4	49	2	58
ASE_00075	RNaseP_bact_a links to Rfam database...	0.69	0.63	0.75	102	108675	41	2	32	7	60
ASE_00076	RNaseP_bact_a links to Rfam database...	0.51	0.49	0.53	58	68156	54	2	49	3	60
ASE_00077	RNaseP_bact_a links to Rfam database...	0.56	0.53	0.58	46	45071	39	4	29	6	40
ASE_00078	RNaseP_bact_a links to Rfam database...	0.72	0.66	0.79	55	43001	20	1	14	5	28
ASE_00079	RNaseP_bact_a links to Rfam database...	0.54	0.51	0.57	51	55522	39	2	36	1	49
ASE_00080	RNaseP_bact_a links to Rfam database...	0.57	0.54	0.60	66	71521	49	6	38	5	57
ASE_00081	RNaseP_bact_a links to Rfam database...	0.79	0.71	0.87	69	49691	11	1	9	1	28
ASE_00082	RNaseP_bact_a links to Rfam database...	0.80	0.73	0.88	85	70403	25	0	12	13	31
ASE_00083	RNaseP_bact_a links to Rfam database...	0.73	0.68	0.78	75	62385	26	2	19	5	35
ASE_00084	RNaseP_bact_a links to Rfam database...	0.78	0.75	0.82	74	53538	21	1	15	5	25
ASE_00087	RNaseP_bact_a links to Rfam database...	0.70	0.65	0.77	93	88289	34	1	27	6	51
ASE_00089	-	0.49	0.46	0.52	36	31306	37	1	32	4	43
ASE_00090	RNaseP_bact_a links to Rfam database...	0.67	0.67	0.67	68	55509	41	4	30	7	33
ASE_00092	RNaseP_bact_a links to Rfam database...	0.76	0.71	0.81	80	63447	23	3	16	4	33
ASE_00096	RNaseP_bact_a links to Rfam database...	0.47	0.45	0.50	52	63442	53	4	48	1	63
ASE_00099	RNaseP_bact_a links to Rfam database...	0.77	0.70	0.86	84	64522	19	0	14	5	36
ASE_00100	RNaseP_nuc links to Rfam database...	0.32	0.32	0.32	24	82141	105	5	45	55	52
ASE_00102	RNaseP_bact_a links to Rfam database...	0.56	0.51	0.62	85	117718	56	5	47	4	81
ASE_00104	RNaseP_bact_a links to Rfam database...	0.70	0.66	0.76	78	64158	28	2	23	3	41
ASE_00105	RNaseP_bact_a links to Rfam database...	0.44	0.41	0.47	45	64166	58	6	44	8	66
ASE_00107	RNaseP_bact_a links to Rfam database...	0.74	0.69	0.79	88	73041	26	1	23	2	39
ASE_00108	RNaseP_nuc links to Rfam database...	0.49	0.49	0.49	31	46908	62	3	29	30	32
ASE_00111	RNaseP_nuc links to Rfam database...	0.26	0.28	0.25	16	50022	66	11	37	18	41
ASE_00112	RNaseP_bact_a links to Rfam database...	0.74	0.72	0.77	83	75358	33	4	21	8	33
ASE_00114	RNaseP_bact_b links to Rfam database...	0.53	0.48	0.60	37	45389	38	2	23	13	40
ASE_00115	RNaseP_bact_a links to Rfam database...	0.70	0.68	0.72	69	54519	35	4	23	8	32
ASE_00116	RNaseP_arch links to Rfam database...	0.32	0.30	0.34	20	31567	42	4	35	3	46
ASE_00118	RNaseP_bact_a links to Rfam database...	0.49	0.47	0.51	48	60632	49	3	43	3	54
ASE_00119	RNaseP_bact_a links to Rfam database...	0.82	0.81	0.83	87	62730	20	2	16	2	21
ASE_00120	RNaseP_arch links to Rfam database...	0.59	0.54	0.65	51	46892	30	3	25	2	43
ASE_00121	RNaseP_arch links to Rfam database...	0.25	0.25	0.25	23	45059	70	6	62	2	69
ASE_00122	RNaseP_bact_a links to Rfam database...	0.69	0.64	0.76	56	43291	18	0	18	0	32
ASE_00123	RNaseP_bact_a links to Rfam database...	0.53	0.51	0.56	43	38426	39	2	32	5	42
ASE_00125	RNaseP_bact_a links to Rfam database...	0.72	0.66	0.79	58	39267	23	0	15	8	30
ASE_00126	RNaseP_bact_a links to Rfam database...	0.82	0.80	0.84	66	40391	19	1	12	6	16
ASE_00128	RNaseP_bact_a links to Rfam database...	0.75	0.71	0.80	71	53212	26	1	17	8	29
ASE_00129	RNaseP_bact_a links to Rfam database...	0.72	0.69	0.75	77	62733	30	3	22	5	34
ASE_00131	RNaseP_bact_a links to Rfam database...	0.63	0.59	0.67	50	39265	33	1	24	8	35
ASE_00132	RNaseP_bact_a links to Rfam database...	0.68	0.64	0.72	61	50318	28	4	20	4	34
ASE_00134	RNaseP_bact_a links to Rfam database...	0.40	0.41	0.40	39	50305	62	8	51	3	56
ASE_00135	RNaseP_bact_a links to Rfam database...	0.66	0.63	0.68	69	63089	39	1	31	7	40
ASE_00136	RNaseP_bact_a links to Rfam database...	0.80	0.76	0.83	70	48121	22	0	14	8	22
ASE_00137	RNaseP_bact_a links to Rfam database...	0.65	0.62	0.67	61	48425	35	1	29	5	37
ASE_00138	RNaseP_bact_a links to Rfam database...	0.62	0.59	0.64	48	40395	29	7	20	2	33
ASE_00139	RNaseP_bact_a links to Rfam database...	0.63	0.58	0.69	60	54198	33	0	27	6	44
ASE_00140	RNaseP_bact_a links to Rfam database...	0.69	0.64	0.75	80	70770	29	4	22	3	45
ASE_00142	RNaseP_bact_a links to Rfam database...	0.69	0.65	0.74	79	67054	32	3	25	4	43
ASE_00144	-	0.49	0.47	0.51	46	58221	48	1	43	4	51
ASE_00145	RNaseP_arch links to Rfam database...	0.58	0.57	0.59	63	70018	48	4	40	4	48
ASE_00146	RNaseP_bact_a links to Rfam database...	0.63	0.57	0.69	71	70773	35	1	31	3	53
ASE_00148	RNaseP_arch links to Rfam database...	0.71	0.69	0.72	107	112427	45	3	38	4	47
ASE_00151	RNaseP_bact_a links to Rfam database...	0.71	0.66	0.76	65	51917	27	5	16	6	33
ASE_00153	RNaseP_nuc links to Rfam database...	0.57	0.59	0.54	43	57551	71	8	28	35	30
ASE_00154	RNaseP_arch links to Rfam database...	0.58	0.58	0.58	62	65234	49	4	41	4	45
ASE_00155	RNaseP_arch links to Rfam database...	0.53	0.51	0.54	73	93394	64	10	51	3	69
ASE_00159	-	0.64	0.61	0.67	37	34925	45	0	18	27	24
ASE_00160	-	0.82	0.80	0.83	40	23823	25	0	8	17	10
ASE_00161	RNaseP_bact_b links to Rfam database...	0.36	0.36	0.36	31	53543	59	8	46	5	56
ASE_00163	RNaseP_bact_a links to Rfam database...	0.32	0.30	0.33	28	53217	64	4	52	8	65
ASE_00165	RNaseP_bact_a links to Rfam database...	0.45	0.45	0.46	45	52878	53	5	47	1	56
ASE_00168	RNaseP_nuc links to Rfam database...	0.18	0.22	0.15	14	60630	98	28	54	16	50
ASE_00169	RNaseP_bact_a links to Rfam database...	0.47	0.40	0.54	43	57212	40	1	35	4	64
ASE_00170	RNaseP_bact_a links to Rfam database...	0.72	0.68	0.77	63	48746	25	2	17	6	30
ASE_00171	RNaseP_bact_a links to Rfam database...	0.72	0.70	0.74	66	48427	24	6	17	1	28
ASE_00172	RNaseP_bact_a links to Rfam database...	0.73	0.69	0.78	73	58902	27	1	20	6	33
ASE_00174	RNaseP_bact_a links to Rfam database...	0.50	0.49	0.51	53	60972	52	8	42	2	56
ASE_00175	RNaseP_bact_a links to Rfam database...	0.70	0.66	0.73	71	59934	32	2	24	6	36
ASE_00176	RNaseP_bact_a links to Rfam database...	0.61	0.55	0.68	61	59941	32	4	25	3	49
ASE_00179	RNaseP_bact_a links to Rfam database...	0.58	0.57	0.59	48	44171	34	5	29	0	36
ASE_00180	RNaseP_bact_a links to Rfam database...	0.70	0.68	0.73	68	51267	30	7	18	5	32
ASE_00181	RNaseP_bact_a links to Rfam database...	0.70	0.64	0.76	68	57540	27	3	19	5	38
ASE_00182	RNaseP_bact_a links to Rfam database...	0.60	0.58	0.61	79	84126	53	5	45	3	57
ASE_00183	RNaseP_bact_a links to Rfam database...	0.71	0.67	0.75	76	61324	31	0	25	6	37
ASE_00184	RNaseP_bact_a links to Rfam database...	0.72	0.71	0.73	72	54516	30	1	26	3	30
ASE_00185	RNaseP_bact_a links to Rfam database...	0.75	0.70	0.81	90	73425	27	1	20	6	38
ASE_00186	RNaseP_bact_a links to Rfam database...	0.67	0.62	0.72	82	78889	39	3	29	7	50
ASE_00187	RNaseP_arch links to Rfam database...	0.40	0.38	0.43	44	68532	66	6	53	7	71
ASE_00189	RNaseP_bact_b links to Rfam database...	0.67	0.65	0.69	66	63095	34	1	28	5	36
ASE_00190	RNaseP_bact_b links to Rfam database...	0.60	0.57	0.63	51	45370	35	3	27	5	39
ASE_00191	RNaseP_arch links to Rfam database...	0.52	0.51	0.53	31	29587	33	2	26	5	30
ASE_00192	RNaseP_bact_b links to Rfam database...	0.51	0.47	0.55	63	84552	57	6	45	6	70
ASE_00194	RNaseP_bact_b links to Rfam database...	0.48	0.45	0.50	54	73428	58	8	46	4	65
ASE_00195	-	0.64	0.59	0.69	78	86207	40	3	32	5	55
ASE_00196	RNaseP_arch links to Rfam database...	0.78	0.77	0.79	58	31553	19	2	13	4	17
ASE_00197	RNaseP_bact_a links to Rfam database...	0.60	0.57	0.64	82	89125	52	2	44	6	63
ASE_00198	RNaseP_bact_a links to Rfam database...	0.84	0.77	0.91	79	52563	14	2	6	6	23
ASE_00203	RNaseP_bact_a links to Rfam database...	0.72	0.70	0.75	67	46576	28	4	18	6	29
ASE_00204	RNaseP_bact_b links to Rfam database...	0.66	0.62	0.70	69	67798	34	6	23	5	43
ASE_00205	RNaseP_arch links to Rfam database...	0.62	0.62	0.62	56	45965	39	7	28	4	34
ASE_00209	RNaseP_arch links to Rfam database...	0.40	0.39	0.43	34	42991	46	5	41	0	54
ASE_00210	RNaseP_arch links to Rfam database...	0.65	0.66	0.64	43	27194	24	6	18	0	22
ASE_00212	RNaseP_bact_a links to Rfam database...	0.61	0.57	0.65	84	93832	50	1	44	5	64
ASE_00213	RNaseP_arch links to Rfam database...	0.72	0.71	0.73	47	27197	20	3	14	3	19
ASE_00214	RNaseP_bact_a links to Rfam database...	0.80	0.78	0.82	80	56182	27	3	15	9	23
ASE_00215	RNaseP_bact_a links to Rfam database...	0.60	0.58	0.63	57	48425	38	5	29	4	42
ASE_00216	RNaseP_bact_a links to Rfam database...	0.55	0.54	0.56	44	39262	35	9	25	1	38
ASE_00217	RNaseP_bact_a links to Rfam database...	0.38	0.34	0.41	31	40395	49	5	39	5	59
ASE_00221	RNaseP_bact_a links to Rfam database...	0.63	0.56	0.71	65	64529	30	1	25	4	52
ASE_00222	RNaseP_arch links to Rfam database...	0.58	0.56	0.60	88	111955	58	4	54	0	69
ASE_00227	RNaseP_bact_a links to Rfam database...	0.56	0.54	0.58	72	78879	52	7	45	0	61
ASE_00228	RNaseP_bact_a links to Rfam database...	0.53	0.53	0.53	46	46885	42	11	29	2	40
ASE_00229	RNaseP_bact_a links to Rfam database...	0.73	0.69	0.78	60	42409	23	1	16	6	27
ASE_00231	RNaseP_bact_a links to Rfam database...	0.62	0.59	0.64	57	47806	35	4	28	3	39
ASE_00232	RNaseP_bact_a links to Rfam database...	0.65	0.65	0.65	55	38419	32	10	19	3	29
ASE_00234	RNaseP_bact_a links to Rfam database...	0.60	0.55	0.66	71	75358	43	2	35	6	58
ASE_00237	RNaseP_nuc links to Rfam database...	0.00	0.00	0.00	0	45677	93	28	48	17	56
ASE_00238	RNaseP_bact_a links to Rfam database...	0.71	0.66	0.77	75	64163	29	2	21	6	39
ASE_00240	RNaseP_bact_a links to Rfam database...	0.68	0.65	0.72	60	46582	29	1	22	6	33
ASE_00241	RNaseP_bact_a links to Rfam database...	0.57	0.54	0.61	47	43879	35	1	29	5	40
ASE_00242	RNaseP_bact_a links to Rfam database...	0.63	0.60	0.67	67	60975	34	1	32	1	45
ASE_00245	RNaseP_nuc links to Rfam database...	0.90	0.86	0.94	67	55207	36	0	4	32	11
ASE_00246	RNaseP_nuc links to Rfam database...	0.36	0.37	0.36	25	48135	68	14	31	23	42
ASE_00247	RNaseP_nuc links to Rfam database...	0.62	0.63	0.63	40	54221	65	7	17	41	24
ASE_00248	RNaseP_bact_a links to Rfam database...	0.40	0.36	0.44	41	62388	53	2	50	1	73
ASE_00250	RNaseP_bact_a links to Rfam database...	0.64	0.58	0.70	76	78894	37	0	33	4	55
ASE_00252	RNaseP_bact_a links to Rfam database...	0.60	0.57	0.63	95	115289	64	2	54	8	73
ASE_00254	RNaseP_bact_a links to Rfam database...	0.38	0.35	0.41	29	36786	46	5	36	5	53
ASE_00255	RNaseP_bact_a links to Rfam database...	0.56	0.54	0.59	70	74572	52	4	45	3	60
ASE_00257	RNaseP_bact_a links to Rfam database...	0.58	0.56	0.61	54	50951	41	3	32	6	43
ASE_00258	RNaseP_nuc links to Rfam database...	0.78	0.78	0.78	42	26742	18	7	5	6	12
ASE_00259	RNaseP_bact_a links to Rfam database...	0.49	0.42	0.57	51	73063	42	3	36	3	70
ASE_00263	RNaseP_bact_a links to Rfam database...	0.69	0.68	0.71	81	70386	35	3	30	2	39
ASE_00264	RNaseP_nuc links to Rfam database...	0.54	0.51	0.58	51	49053	48	1	36	11	49
ASE_00267	RNaseP_bact_a links to Rfam database...	0.66	0.61	0.70	54	45073	32	1	22	9	34
ASE_00270	RNaseP_bact_a links to Rfam database...	0.81	0.78	0.84	100	72271	24	1	18	5	28
ASE_00274	RNaseP_bact_a links to Rfam database...	0.62	0.57	0.68	59	55524	30	5	23	2	44
ASE_00277	RNaseP_bact_a links to Rfam database...	0.43	0.43	0.42	39	48113	55	9	44	2	52
ASE_00279	RNaseP_bact_a links to Rfam database...	0.49	0.48	0.51	48	53207	48	7	39	2	53
ASE_00280	RNaseP_bact_a links to Rfam database...	0.51	0.49	0.54	48	51914	45	8	33	4	50
ASE_00281	RNaseP_bact_a links to Rfam database...	0.73	0.69	0.76	61	44471	28	0	19	9	27
ASE_00282	RNaseP_bact_a links to Rfam database...	0.44	0.44	0.45	56	77690	69	5	64	0	71
ASE_00283	RNaseP_bact_a links to Rfam database...	0.75	0.72	0.79	77	61678	27	3	18	6	30
ASE_00284	RNaseP_bact_a links to Rfam database...	0.68	0.66	0.71	71	58211	37	4	25	8	37
ASE_00285	RNaseP_bact_a links to Rfam database...	0.80	0.75	0.86	92	68899	25	3	12	10	30
ASE_00286	RNaseP_bact_a links to Rfam database...	0.40	0.38	0.42	35	46581	58	2	47	9	57
ASE_00287	RNaseP_bact_a links to Rfam database...	0.72	0.68	0.76	70	54854	28	2	20	6	33
ASE_00288	RNaseP_bact_a links to Rfam database...	0.32	0.31	0.33	29	45967	62	6	54	2	64
ASE_00289	RNaseP_bact_a links to Rfam database...	0.60	0.54	0.66	85	100897	47	3	40	4	72
ASE_00291	-	0.40	0.40	0.40	38	48422	57	9	47	1	56
ASE_00292	RNaseP_bact_a links to Rfam database...	0.47	0.43	0.52	60	81694	59	1	55	3	78
ASE_00294	RNaseP_bact_a links to Rfam database...	0.73	0.66	0.81	113	114342	31	0	26	5	58
ASE_00295	RNaseP_bact_a links to Rfam database...	0.62	0.54	0.70	71	73819	33	3	27	3	60
ASE_00296	RNaseP_bact_a links to Rfam database...	0.44	0.41	0.47	59	91680	69	7	60	2	86
ASE_00297	RNaseP_bact_a links to Rfam database...	0.75	0.72	0.77	71	52883	24	3	18	3	27
ASE_00298	RNaseP_bact_a links to Rfam database...	0.52	0.50	0.54	56	67425	50	1	46	3	57
ASE_00299	RNaseP_bact_a links to Rfam database...	0.55	0.54	0.57	54	49360	45	3	38	4	46
ASE_00303	RNaseP_nuc links to Rfam database...	0.61	0.62	0.60	59	67797	51	9	31	11	36
ASE_00305	RNaseP_bact_b links to Rfam database...	0.65	0.60	0.70	51	54542	33	1	21	11	34
ASE_00313	RNaseP_nuc links to Rfam database...	0.66	0.67	0.64	60	62387	55	9	25	21	29
ASE_00316	RNaseP_nuc links to Rfam database...	0.57	0.54	0.60	53	107791	74	4	32	38	45
ASE_00318	RNaseP_bact_b links to Rfam database...	0.64	0.63	0.65	74	80087	44	14	25	5	44
ASE_00321	RNaseP_bact_b links to Rfam database...	0.71	0.65	0.78	57	54542	22	1	15	6	31
ASE_00322	-	0.76	0.81	0.71	39	29348	41	3	13	25	9
ASE_00327	RNaseP_nuc links to Rfam database...	0.79	0.76	0.82	68	57208	34	5	10	19	21
ASE_00328	RNaseP_bact_b links to Rfam database...	0.67	0.63	0.73	70	72675	40	4	22	14	42
ASE_00329	RNaseP_nuc links to Rfam database...	0.64	0.68	0.60	43	40683	52	8	21	23	20
ASE_00330	RNaseP_nuc links to Rfam database...	0.64	0.66	0.62	59	56185	51	6	30	15	31
ASE_00332	RNaseP_bact_a links to Rfam database...	0.51	0.49	0.54	68	81683	62	2	57	3	70
ASE_00335	RNaseP_bact_b links to Rfam database...	0.62	0.58	0.66	67	75364	42	6	29	7	49
ASE_00337	RNaseP_nuc links to Rfam database...	0.39	0.41	0.38	29	39263	60	5	43	12	42
ASE_00338	RNaseP_nuc links to Rfam database...	0.68	0.63	0.74	62	66346	38	3	19	16	36
ASE_00339	RNaseP_bact_a links to Rfam database...	0.64	0.59	0.70	70	80100	37	2	28	7	49
ASE_00340	RNaseP_bact_a links to Rfam database...	0.74	0.74	0.73	63	45970	27	7	16	4	22
ASE_00342	RNaseP_bact_a links to Rfam database...	0.62	0.58	0.67	67	62381	34	1	32	1	48
ASE_00343	RNaseP_bact_a links to Rfam database...	0.68	0.68	0.69	77	83324	49	8	27	14	36
ASE_00344	-	0.80	0.82	0.78	46	27202	31	4	9	18	10
ASE_00346	RNaseP_arch links to Rfam database...	0.43	0.41	0.45	40	48117	56	4	44	8	57
ASE_00350	-	0.92	0.88	0.96	46	29598	24	0	2	22	6
ASE_00353	RNaseP_bact_a links to Rfam database...	0.57	0.57	0.58	61	57864	49	4	41	4	46
ASE_00359	RNaseP_arch links to Rfam database...	0.25	0.24	0.26	19	42704	55	5	50	0	61
ASE_00360	RNaseP_arch links to Rfam database...	0.29	0.28	0.31	18	29344	46	9	32	5	47
ASE_00361	RNaseP_bact_a links to Rfam database...	0.54	0.53	0.56	67	75347	55	10	42	3	60
ASE_00362	RNaseP_bact_a links to Rfam database...	0.58	0.58	0.58	53	48114	41	2	36	3	38
ASE_00363	RNaseP_bact_a links to Rfam database...	0.58	0.55	0.60	52	51274	41	2	32	7	42
ASE_00364	RNaseP_bact_a links to Rfam database...	0.74	0.70	0.78	74	54190	29	1	20	8	31
ASE_00366	RNaseP_bact_a links to Rfam database...	0.41	0.42	0.41	41	58553	60	6	53	1	57
ASE_00367	RNaseP_bact_a links to Rfam database...	0.55	0.51	0.59	44	42997	38	1	29	8	42
ASE_00369	RNaseP_bact_a links to Rfam database...	0.63	0.63	0.64	67	55841	39	1	36	2	40
ASE_00370	RNaseP_bact_a links to Rfam database...	0.77	0.73	0.82	61	41831	22	1	12	9	23
ASE_00372	RNaseP_bact_a links to Rfam database...	0.68	0.65	0.71	65	51911	33	5	22	6	35
ASE_00374	RNaseP_bact_a links to Rfam database...	0.72	0.72	0.72	63	44763	26	3	21	2	25
ASE_00375	RNaseP_bact_a links to Rfam database...	0.83	0.78	0.88	86	60280	19	1	11	7	24
ASE_00376	RNaseP_bact_a links to Rfam database...	0.67	0.64	0.71	67	56858	30	1	27	2	38
ASE_00377	RNaseP_bact_a links to Rfam database...	0.73	0.70	0.76	75	57531	30	3	21	6	32
ASE_00379	RNaseP_bact_a links to Rfam database...	0.60	0.56	0.63	50	45977	39	3	26	10	39
ASE_00380	RNaseP_bact_a links to Rfam database...	0.70	0.67	0.74	66	54857	28	6	17	5	33
ASE_00382	RNaseP_bact_a links to Rfam database...	0.67	0.65	0.70	55	41826	29	6	18	5	29
ASE_00383	RNaseP_bact_a links to Rfam database...	0.46	0.42	0.50	44	54527	47	3	41	3	61
ASE_00384	RNaseP_bact_a links to Rfam database...	0.61	0.59	0.63	54	48430	37	2	30	5	38
ASE_00385	RNaseP_bact_a links to Rfam database...	0.51	0.51	0.53	41	41827	41	12	25	4	40
ASE_00386	RNaseP_bact_a links to Rfam database...	0.54	0.51	0.57	49	50317	39	7	30	2	47
ASE_00387	RNaseP_bact_a links to Rfam database...	0.70	0.66	0.73	69	55851	30	1	24	5	35
ASE_00388	RNaseP_bact_a links to Rfam database...	0.61	0.55	0.67	49	45680	34	1	23	10	40
ASE_00390	RNaseP_bact_a links to Rfam database...	0.62	0.60	0.64	51	42115	39	0	29	10	34
ASE_00393	RNaseP_bact_a links to Rfam database...	0.48	0.46	0.51	43	47810	49	2	40	7	50
ASE_00394	RNaseP_bact_a links to Rfam database...	0.78	0.76	0.80	71	46882	23	2	16	5	22
ASE_00395	RNaseP_bact_a links to Rfam database...	0.67	0.65	0.68	55	41535	32	2	24	6	29
ASE_00396	RNaseP_bact_a links to Rfam database...	0.55	0.52	0.58	43	41542	36	2	29	5	40
ASE_00397	RNaseP_bact_a links to Rfam database...	0.58	0.56	0.60	59	54517	43	4	35	4	46
ASE_00398	RNaseP_bact_a links to Rfam database...	0.62	0.58	0.66	60	55854	39	1	30	8	44
ASE_00400	RNaseP_bact_a links to Rfam database...	0.66	0.63	0.70	67	57874	34	1	28	5	39
ASE_00401	RNaseP_bact_a links to Rfam database...	0.65	0.63	0.67	79	76910	40	5	34	1	47
ASE_00402	RNaseP_bact_a links to Rfam database...	0.73	0.68	0.77	58	42411	22	2	15	5	27
ASE_00403	RNaseP_bact_a links to Rfam database...	0.45	0.42	0.47	45	55850	54	1	49	4	62
ASE_00404	RNaseP_bact_a links to Rfam database...	0.53	0.49	0.58	42	42998	39	1	30	8	43
ASE_00406	RNaseP_bact_a links to Rfam database...	0.81	0.76	0.87	71	48746	21	0	11	10	23
ASE_00408	-	0.70	0.72	0.68	51	32310	30	4	20	6	20
ASE_00409	-	0.48	0.46	0.50	38	40965	39	4	34	1	45
ASE_00411	RNaseP_bact_a links to Rfam database...	0.49	0.46	0.52	41	49376	45	5	33	7	48
ASE_00412	RNaseP_bact_a links to Rfam database...	0.49	0.46	0.53	48	58220	47	5	38	4	57
ASE_00413	RNaseP_bact_a links to Rfam database...	0.64	0.65	0.63	53	44467	33	10	21	2	28
ASE_00414	RNaseP_bact_a links to Rfam database...	0.47	0.45	0.49	43	46273	51	2	42	7	52
ASE_00415	RNaseP_bact_a links to Rfam database...	0.66	0.65	0.66	67	54845	36	6	28	2	36
ASE_00416	RNaseP_bact_a links to Rfam database...	0.70	0.67	0.73	85	77304	41	1	31	9	42
ASE_00417	RNaseP_arch links to Rfam database...	0.36	0.37	0.35	37	54510	69	9	59	1	63
ASE_00418	RNaseP_arch links to Rfam database...	0.19	0.20	0.19	15	38702	67	8	56	3	60
ASE_00419	RNaseP_bact_a links to Rfam database...	0.82	0.80	0.85	82	54849	17	5	10	2	21
ASE_00420	RNaseP_nuc links to Rfam database...	0.79	0.79	0.79	50	43302	39	3	10	26	13
ASE_00422	RNaseP_bact_a links to Rfam database...	0.78	0.77	0.79	72	46880	26	5	14	7	22
ASE_00423	RNaseP_bact_a links to Rfam database...	0.58	0.58	0.58	63	56845	45	8	37	0	46
ASE_00426	RNaseP_bact_a links to Rfam database...	0.44	0.42	0.46	45	60977	53	2	51	0	63
ASE_00427	RNaseP_nuc links to Rfam database...	0.12	0.15	0.10	7	40683	78	24	41	13	39
ASE_00428	RNaseP_bact_a links to Rfam database...	0.78	0.75	0.81	94	76520	29	3	19	7	31
ASE_00429	-	0.55	0.52	0.60	34	28146	32	1	22	9	32
ASE_00430	RNaseP_bact_a links to Rfam database...	0.75	0.74	0.76	72	46876	30	5	18	7	25
ASE_00431	RNaseP_bact_a links to Rfam database...	0.65	0.57	0.74	54	46287	29	1	18	10	41
ASE_00434	RNaseP_bact_b links to Rfam database...	0.61	0.59	0.63	65	68162	46	5	33	8	45
ASE_00437	RNaseP_bact_a links to Rfam database...	0.44	0.41	0.49	55	79288	62	0	58	4	80
ASE_00438	RNaseP_bact_a links to Rfam database...	0.50	0.47	0.52	55	65961	50	2	48	0	61
ASE_00441	RNaseP_bact_a links to Rfam database...	0.79	0.74	0.84	83	64162	21	1	15	5	29
ASE_00443	RNaseP_nuc links to Rfam database...	0.99	0.98	1.00	49	26747	29	0	0	29	1
ASE_00447	RNaseP_bact_a links to Rfam database...	0.77	0.72	0.82	83	60277	24	1	17	6	33
ASE_00448	RNaseP_bact_a links to Rfam database...	0.22	0.22	0.22	25	64149	93	7	80	6	87
ASE_00451	RNaseP_bact_a links to Rfam database...	0.64	0.60	0.68	75	70765	41	3	33	5	50
ASE_00452	-	0.86	0.85	0.87	33	20872	31	0	5	26	6
ASE_00453	-	0.72	0.73	0.70	38	34137	51	0	16	35	14
ASE_00454	RNaseP_nuc links to Rfam database...	0.54	0.54	0.55	34	43303	55	1	27	27	29
CRW_00004	-	0.64	0.63	0.64	83	154160	75	12	35	28	48
CRW_00005	-	0.62	0.63	0.61	83	137938	73	13	41	19	49
CRW_00007	-	0.47	0.49	0.45	65	144848	85	26	52	7	68
CRW_00009	-	0.54	0.56	0.53	77	137930	91	8	60	23	61
CRW_00010	-	0.79	0.79	0.80	99	102707	40	6	19	15	27
CRW_00011	-	0.66	0.68	0.64	94	118195	65	7	45	13	44
CRW_00012	-	0.53	0.54	0.52	76	147006	83	14	57	12	65
CRW_00013	Intron_gpI links to Rfam database...	0.42	0.37	0.47	43	103648	69	4	45	20	72
CRW_00014	-	0.51	0.50	0.52	61	103623	69	12	44	13	62
CRW_00016	Intron_gpI links to Rfam database...	0.51	0.47	0.57	56	77322	56	6	37	13	64
CRW_00017	-	0.53	0.54	0.52	49	92140	70	16	30	24	42
CRW_00018	-	0.62	0.60	0.64	72	182598	89	7	33	49	49
CRW_00019	-	0.73	0.74	0.73	101	127626	62	4	34	24	36
CRW_00423	-	0.22	0.20	0.24	37	242401	131	19	99	13	152
CRW_00429	-	0.18	0.16	0.19	38	306736	165	31	131	3	195
CRW_00601	-	0.09	0.10	0.09	7	186884	151	27	48	76	61
CRW_00602	-	0.13	0.18	0.10	12	223997	194	40	66	88	56
CRW_00603	-	0.12	0.13	0.12	9	192433	151	21	47	83	59
CRW_00605	-	0.72	0.71	0.74	50	183853	120	1	17	102	20
CRW_00608	-	0.74	0.70	0.79	55	35708	25	0	15	10	24
CRW_00610	Intron_gpI links to Rfam database...	0.46	0.46	0.47	37	36237	41	7	34	0	44
CRW_00611	-	0.69	0.67	0.72	50	31306	27	0	19	8	25
CRW_00612	-	0.64	0.61	0.66	57	270394	174	1	28	145	36
CRW_00613	Intron_gpI links to Rfam database...	0.85	0.82	0.89	64	34908	16	0	8	8	14
CRW_00614	Intron_gpI links to Rfam database...	0.14	0.16	0.12	9	121696	125	18	48	59	48
CRW_00618	Intron_gpI links to Rfam database...	0.19	0.20	0.19	12	56217	69	7	44	18	49
CRW_00619	Intron_gpI links to Rfam database...	0.36	0.37	0.35	27	164947	145	7	44	94	46
CRW_00620	Intron_gpI links to Rfam database...	0.18	0.21	0.15	13	150890	150	18	54	78	50
CRW_00621	Intron_gpI links to Rfam database...	0.38	0.35	0.42	25	153121	125	6	29	90	46
CRW_00623	Intron_gpI links to Rfam database...	0.32	0.29	0.35	24	129727	109	5	39	65	59
CRW_00626	-	0.55	0.59	0.52	61	100907	72	19	38	15	43
CRW_00629	-	0.41	0.41	0.41	50	91256	75	13	59	3	72
CRW_00632	-	0.61	0.59	0.63	76	82907	51	4	41	6	52
CRW_00633	Intron_gpI links to Rfam database...	0.62	0.57	0.67	60	63457	32	8	21	3	46
CRW_00634	Intron_gpI links to Rfam database...	0.48	0.47	0.49	44	64531	49	9	36	4	50
CRW_00635	-	0.38	0.38	0.38	52	109142	93	11	73	9	85
CRW_00636	-	0.47	0.46	0.48	66	114823	76	10	61	5	77
CRW_00637	-	0.42	0.42	0.42	67	133743	102	18	75	9	91
CRW_00639	-	0.63	0.64	0.63	88	126616	58	17	35	6	50
CRW_00641	-	0.72	0.71	0.74	54	39830	24	3	16	5	22
CRW_00642	-	0.52	0.57	0.47	37	47199	50	9	33	8	28
CRW_00643	-	0.39	0.43	0.36	52	123110	99	25	69	5	70
CRW_00645	-	0.81	0.84	0.78	56	35439	25	6	10	9	11
CRW_00646	-	0.54	0.53	0.56	34	34919	33	4	23	6	30
CRW_00648	-	0.57	0.57	0.58	84	137930	71	12	49	10	64
CRW_00649	-	0.76	0.76	0.77	94	204358	108	2	26	80	30
CRW_00650	-	0.54	0.51	0.57	73	112922	61	2	53	6	69
CRW_00651	-	0.46	0.49	0.44	59	99993	78	16	60	2	62
CRW_00652	-	0.45	0.48	0.42	62	132209	102	8	76	18	68
CRW_00653	-	0.89	0.87	0.91	116	94703	14	2	9	3	18
CRW_00654	-	0.68	0.65	0.71	80	78097	38	3	30	5	44
CRW_00655	-	0.75	0.73	0.78	90	89138	31	5	20	6	34
CRW_00656	-	0.59	0.58	0.59	75	90398	58	18	34	6	54
CRW_00657	-	0.76	0.75	0.77	102	105898	38	4	26	8	34
CRW_00658	-	0.48	0.49	0.47	50	74584	62	18	39	5	52
CRW_00659	-	0.50	0.51	0.48	31	32321	42	9	24	9	30
CRW_00660	-	0.51	0.50	0.53	30	22098	27	5	22	0	30
CRW_00661	-	0.07	0.08	0.06	4	24247	61	18	41	2	47
CRW_00662	-	0.39	0.40	0.38	26	28612	49	7	35	7	39
CRW_00663	-	0.00	0.00	0.00	0	26031	76	12	63	1	61
CRW_00664	-	0.20	0.22	0.19	17	53538	75	23	50	2	61
CRW_00665	-	0.11	0.13	0.11	6	23596	58	16	35	7	42
CRW_00666	-	0.51	0.49	0.52	62	96022	67	7	50	10	64
CRW_00668	-	0.49	0.50	0.47	75	163719	99	17	67	15	75
CRW_00669	-	0.40	0.39	0.41	46	97349	68	21	45	2	73
CRW_00670	Intron_gpI links to Rfam database...	0.56	0.58	0.56	69	70001	57	12	43	2	51
CRW_00671	Intron_gpI links to Rfam database...	0.80	0.76	0.85	89	62730	20	1	15	4	28
CRW_00672	Intron_gpI links to Rfam database...	0.78	0.77	0.78	86	72280	32	6	18	8	25
CRW_00673	-	0.60	0.62	0.58	65	100015	60	16	32	12	40
CRW_00674	Intron_gpI links to Rfam database...	0.63	0.61	0.64	76	83318	45	8	34	3	48
CRW_00676	Intron_gpI links to Rfam database...	0.60	0.60	0.60	69	93413	64	12	34	18	46
CRW_00677	-	0.55	0.56	0.54	59	71900	56	12	39	5	46
CRW_00679	-	0.34	0.36	0.33	38	76522	79	14	62	3	69
CRW_00681	-	0.55	0.61	0.50	68	112914	83	25	43	15	44
CRW_00685	-	0.38	0.40	0.37	42	156967	113	13	58	42	64
CRW_00686	-	0.57	0.58	0.57	72	95139	67	7	48	12	53
CRW_00687	-	0.67	0.70	0.65	46	28609	29	8	17	4	20
CRW_00688	-	0.84	0.81	0.87	46	21892	10	0	7	3	11
CRW_00689	-	0.69	0.70	0.68	54	33590	28	10	16	2	23
CRW_00690	-	0.70	0.68	0.72	47	33346	24	4	14	6	22
CRW_00691	-	0.52	0.54	0.51	36	27191	35	2	32	1	31
CRW_00692	Intron_gpI links to Rfam database...	0.33	0.34	0.32	31	68537	80	17	50	13	59
CRW_00693	-	0.55	0.56	0.54	68	89126	69	8	51	10	54
CRW_00694	-	0.69	0.68	0.69	83	85785	47	4	33	10	39
CRW_00699	-	0.63	0.62	0.63	78	91683	47	10	35	2	48
CRW_00700	-	0.69	0.67	0.71	99	180762	74	8	32	34	48
CRW_00703	-	0.60	0.55	0.65	36	40415	27	3	16	8	30
CRW_00714	-	0.51	0.50	0.51	54	186249	114	10	42	62	53
CRW_00715	-	0.81	0.80	0.81	83	69276	23	7	12	4	21
CRW_00716	-	0.71	0.74	0.69	66	193657	96	7	23	66	23
CRW_00717	-	0.67	0.61	0.73	90	153612	50	7	26	17	58
CRW_00718	-	0.71	0.69	0.72	132	189853	66	2	49	15	59
CRW_00719	-	0.56	0.53	0.59	48	230100	140	8	25	107	43
CRW_00720	-	0.10	0.11	0.10	10	208234	162	8	83	71	81
CRW_00721	-	0.60	0.63	0.57	43	58577	59	10	23	26	25
CRW_00727	-	0.45	0.51	0.40	60	303659	142	54	37	51	57
CRW_00728	-	0.31	0.33	0.29	39	272558	166	20	74	72	80
CRW_00729	-	0.29	0.31	0.28	38	191134	123	28	71	24	83
CRW_00731	-	0.21	0.26	0.18	32	297424	212	49	101	62	91
CRW_00733	-	0.41	0.46	0.36	50	216673	151	29	59	63	59
CRW_00736	-	0.12	0.12	0.11	16	241720	156	27	97	32	115
CRW_00737	-	0.30	0.36	0.25	41	295900	163	60	64	39	73
CRW_00738	-	0.33	0.34	0.31	47	287509	166	32	73	61	90
CRW_00739	-	0.32	0.33	0.31	44	284491	163	19	81	63	91
CRW_00741	-	0.42	0.47	0.37	63	250108	131	38	69	24	72
CRW_00756	-	0.70	0.69	0.71	119	194832	61	7	42	12	53
CRW_00764	-	0.10	0.10	0.10	20	252922	181	34	140	7	176
CRW_00775	-	0.13	0.13	0.13	27	314613	183	48	133	2	185
CRW_00815	-	0.72	0.72	0.73	113	159740	54	11	31	12	45
CRW_00816	-	0.40	0.41	0.39	53	143779	104	9	75	20	76
CRW_00820	-	0.70	0.67	0.73	97	136371	57	2	33	22	48
PDB_00072	-	0.57	0.58	0.56	121	148025	94	10	84	0	89
PDB_00078	-	0.71	0.68	0.74	78	49665	27	5	22	0	37
PDB_00079	-	0.51	0.49	0.53	69	121641	84	10	51	23	73
PDB_00278	-	0.10	0.10	0.11	7	24912	57	2	55	0	65
PDB_00398	-	0.00	0.00	0.00	0	71900	110	28	82	0	103
PDB_00403	-	0.53	0.50	0.56	77	124612	70	13	48	9	76
PDB_00423	-	0.23	0.23	0.23	17	26723	56	6	50	0	57
PDB_00528	-	1.00	1.00	1.00	103	45953	1	0	0	1	0
PDB_00555	-	0.46	0.44	0.49	39	25345	44	0	41	3	49
PDB_00601	-	0.31	0.28	0.35	22	36252	44	5	36	3	57
PDB_00701	-	0.10	0.10	0.10	11	45344	96	9	87	0	98
PDB_00739	-	0.00	0.00	0.00	0	25806	72	10	62	0	67
PDB_00747	-	0.76	0.66	0.88	53	24471	8	1	6	1	27
PDB_00827	Intron_gpI links to Rfam database...	0.77	0.65	0.91	53	26970	7	0	5	2	28
PDB_00917	-	0.49	0.46	0.52	44	35161	47	3	37	7	51
PDB_00919	RNaseP_bact_a links to Rfam database...	0.53	0.48	0.58	49	44169	39	3	32	4	54
PDB_00985	-	0.20	0.23	0.18	15	30545	71	10	58	3	49
PDB_01076	-	0.60	0.52	0.69	41	23377	25	1	17	7	38
PDB_01129	-	0.42	0.44	0.40	31	35433	51	21	26	4	40
PDB_01144	-	0.31	0.28	0.35	35	82929	74	3	61	10	92
PDB_01157	-	0.33	0.31	0.35	30	50001	55	9	46	0	68
PDB_01161	-	0.24	0.23	0.27	17	36792	48	4	43	1	58
PDB_01166	-	0.54	0.50	0.57	107	181918	87	18	63	6	105
PDB_01193	-	0.45	0.42	0.48	63	105898	78	4	65	9	88
RFA_00597	Telomerase-vert links to Rfam database...	0.24	0.26	0.23	28	97782	106	20	73	13	81
RFA_00598	Telomerase-vert links to Rfam database...	0.66	0.63	0.68	64	84572	59	3	27	29	37
RFA_00599	Telomerase-vert links to Rfam database...	0.72	0.72	0.71	80	101363	56	10	22	24	31
RFA_00600	Telomerase-vert links to Rfam database...	0.62	0.69	0.55	69	120170	89	30	26	33	31
RFA_00601	Telomerase-vert links to Rfam database...	0.49	0.52	0.46	59	99108	82	28	40	14	55
RFA_00602	Telomerase-vert links to Rfam database...	0.66	0.68	0.64	79	101352	64	17	27	20	37
RFA_00606	Telomerase-cil links to Rfam database...	0.68	0.67	0.70	26	21284	24	7	4	13	13
RFA_00616	-	0.55	0.56	0.54	22	22964	34	6	13	15	17
RFA_00618	-	0.44	0.44	0.45	17	22967	35	6	15	14	22
RFA_00619	-	0.29	0.33	0.25	13	22739	51	13	26	12	26
RFA_00620	Telomerase-cil links to Rfam database...	0.44	0.49	0.40	19	21897	42	7	22	13	20
RFA_00621	RNase_MRP links to Rfam database...	0.41	0.41	0.42	31	46286	56	1	42	13	45
RFA_00623	RNase_MRP links to Rfam database...	0.38	0.38	0.37	30	43875	62	3	48	11	48
RFA_00624	RNase_MRP links to Rfam database...	0.43	0.46	0.41	28	30066	48	6	35	7	33
RFA_00626	rne5 links to Rfam database...	0.88	0.84	0.92	73	56537	23	2	4	17	14
RFA_00627	rne5 links to Rfam database...	0.71	0.68	0.74	59	56873	37	5	16	16	28
RFA_00628	rne5 links to Rfam database...	0.91	0.88	0.94	76	57210	25	0	5	20	10
RFA_00630	rne5 links to Rfam database...	0.66	0.66	0.66	57	56867	44	7	22	15	30
RFA_00639	7SK links to Rfam database...	0.49	0.51	0.48	44	54523	57	12	36	9	43
RFA_00805	RNAIII links to Rfam database...	0.72	0.69	0.75	104	133247	44	5	30	9	46
RFA_00814	R2_retro_el links to Rfam database...	0.24	0.27	0.22	11	25149	45	9	31	5	30
RFA_00815	R2_retro_el links to Rfam database...	0.57	0.61	0.54	25	24485	29	4	17	8	16
RFA_00816	R2_retro_el links to Rfam database...	0.63	0.66	0.60	27	23175	24	11	7	6	14
RFA_00817	R2_retro_el links to Rfam database...	0.10	0.12	0.08	5	21883	57	17	40	0	36
RFA_00818	R2_retro_el links to Rfam database...	0.48	0.54	0.43	22	20250	30	12	17	1	19
RFA_00819	R2_retro_el links to Rfam database...	0.96	0.95	0.98	39	27926	33	0	1	32	2
RFA_00820	bicoid_3 links to Rfam database...	0.87	0.84	0.91	134	151378	25	1	12	12	26
RFA_00830	bicoid_3 links to Rfam database...	0.48	0.45	0.51	69	152494	108	5	60	43	85
SRP_00002	Metazoa_SRP links to Rfam database...	0.88	0.88	0.88	90	45048	13	4	8	1	12
SRP_00003	-	0.73	0.76	0.70	73	45951	33	13	19	1	23
SRP_00006	Metazoa_SRP links to Rfam database...	0.84	0.83	0.86	84	45655	17	3	11	3	17
SRP_00009	Plant_SRP links to Rfam database...	0.50	0.44	0.56	45	46585	35	5	30	0	57
SRP_00011	Plant_SRP links to Rfam database...	0.63	0.62	0.64	64	46260	36	2	34	0	40
SRP_00012	Plant_SRP links to Rfam database...	0.68	0.65	0.71	66	46267	28	1	26	1	35
SRP_00015	Plant_SRP links to Rfam database...	0.83	0.80	0.87	79	46269	19	0	12	7	20
SRP_00016	Archaea_SRP links to Rfam database...	0.79	0.78	0.80	85	47789	22	3	18	1	24
SRP_00018	Fungi_SRP links to Rfam database...	0.55	0.54	0.56	44	38425	43	5	29	9	37
SRP_00019	Fungi_SRP links to Rfam database...	0.91	0.88	0.94	80	35961	11	1	4	6	11
SRP_00023	-	0.00	0.00	0.00	0	20859	51	13	38	0	35
SRP_00024	Bacteria_large_SRP links to Rfam database...	0.37	0.38	0.36	33	37584	58	8	50	0	54
SRP_00026	Bacteria_large_SRP links to Rfam database...	0.68	0.69	0.66	61	36764	37	3	28	6	27
SRP_00027	Bacteria_large_SRP links to Rfam database...	0.77	0.74	0.80	64	37048	18	0	16	2	23
SRP_00030	Bacteria_large_SRP links to Rfam database...	0.78	0.81	0.76	71	36762	26	5	18	3	17
SRP_00031	Bacteria_large_SRP links to Rfam database...	0.68	0.70	0.67	62	36222	34	4	27	3	27
SRP_00037	Bacteria_large_SRP links to Rfam database...	0.43	0.44	0.43	38	36497	50	9	41	0	49
SRP_00050	Metazoa_SRP links to Rfam database...	0.96	0.93	0.99	92	44757	3	0	1	2	7
SRP_00053	Metazoa_SRP links to Rfam database...	0.90	0.88	0.91	83	45059	18	0	8	10	11
SRP_00060	Metazoa_SRP links to Rfam database...	0.94	0.92	0.97	92	44456	10	0	3	7	8
SRP_00061	Metazoa_SRP links to Rfam database...	0.93	0.91	0.96	91	44755	12	0	4	8	9
SRP_00066	Metazoa_SRP links to Rfam database...	0.00	0.00	0.00	0	45357	94	10	84	0	100
SRP_00069	Fungi_SRP links to Rfam database...	0.70	0.67	0.74	57	34376	23	2	18	3	28
SRP_00070	Fungi_SRP links to Rfam database...	0.27	0.31	0.24	38	126596	129	36	86	7	83
SRP_00073	Fungi_SRP links to Rfam database...	0.65	0.68	0.62	48	38983	41	8	21	12	23
SRP_00076	-	0.00	0.00	0.00	0	25363	76	15	47	14	39
SRP_00079	Plant_SRP links to Rfam database...	0.75	0.73	0.77	64	41822	28	3	16	9	24
SRP_00085	Plant_SRP links to Rfam database...	0.66	0.63	0.70	64	45359	31	6	22	3	37
SRP_00086	Metazoa_SRP links to Rfam database...	0.59	0.60	0.58	60	44150	44	3	40	1	40
SRP_00087	Fungi_SRP links to Rfam database...	0.07	0.09	0.06	5	37322	81	20	54	7	53
SRP_00088	Bacteria_large_SRP links to Rfam database...	0.68	0.71	0.66	63	34096	32	3	29	0	26
SRP_00089	Bacteria_large_SRP links to Rfam database...	0.75	0.76	0.75	68	35687	23	1	22	0	22
SRP_00090	Bacteria_large_SRP links to Rfam database...	0.31	0.31	0.32	28	35423	61	5	55	1	62
SRP_00091	Fungi_SRP links to Rfam database...	0.84	0.82	0.86	78	52884	16	2	11	3	17
SRP_00099	Plant_SRP links to Rfam database...	0.61	0.63	0.59	60	44748	43	7	35	1	35
SRP_00102	Metazoa_SRP links to Rfam database...	0.77	0.74	0.79	75	44456	23	1	19	3	26
SRP_00103	Metazoa_SRP links to Rfam database...	0.79	0.77	0.81	79	45354	20	2	16	2	23
SRP_00104	Fungi_SRP links to Rfam database...	0.39	0.43	0.35	30	34368	61	8	47	6	39
SRP_00108	-	0.60	0.60	0.59	42	38432	35	5	24	6	28
SRP_00117	Metazoa_SRP links to Rfam database...	0.73	0.72	0.75	73	45354	26	2	22	2	29
SRP_00118	-	0.57	0.55	0.59	52	39252	38	0	36	2	43
SRP_00120	-	0.92	0.86	0.99	74	37326	2	0	1	1	12
SRP_00123	Metazoa_SRP links to Rfam database...	0.86	0.86	0.86	78	36494	16	3	10	3	13
SRP_00124	Metazoa_SRP links to Rfam database...	0.64	0.62	0.65	53	37047	33	3	25	5	32
SRP_00125	-	0.79	0.78	0.81	83	50301	23	0	19	4	24
SRP_00127	Fungi_SRP links to Rfam database...	0.73	0.71	0.74	85	72275	38	5	25	8	34
SRP_00130	Archaea_SRP links to Rfam database...	0.48	0.48	0.48	47	49672	54	5	46	3	50
SRP_00136	Fungi_SRP links to Rfam database...	0.35	0.38	0.33	27	44170	62	11	45	6	44
SRP_00142	Archaea_SRP links to Rfam database...	0.31	0.31	0.31	29	45962	66	7	58	1	64
SRP_00143	Archaea_SRP links to Rfam database...	0.37	0.38	0.36	38	49664	70	8	60	2	63
SRP_00144	Archaea_SRP links to Rfam database...	0.38	0.39	0.38	37	46567	65	7	54	4	57
SRP_00148	Fungi_SRP links to Rfam database...	0.55	0.57	0.53	50	49992	56	3	41	12	37
SRP_00152	Plant_SRP links to Rfam database...	0.70	0.68	0.71	70	45655	30	1	27	2	33
SRP_00153	Plant_SRP links to Rfam database...	0.75	0.74	0.77	79	46868	26	6	18	2	28
SRP_00157	Fungi_SRP links to Rfam database...	0.38	0.42	0.35	30	44168	62	14	41	7	42
SRP_00158	Fungi_SRP links to Rfam database...	0.31	0.37	0.26	43	124086	126	52	70	4	72
SRP_00160	Fungi_SRP links to Rfam database...	0.45	0.44	0.46	57	86196	70	3	64	3	73
SRP_00167	-	0.31	0.31	0.32	26	38699	61	6	50	5	58
SRP_00168	-	0.34	0.33	0.36	30	38697	54	6	48	0	61
SRP_00171	Metazoa_SRP links to Rfam database...	0.00	0.00	0.00	0	45353	98	15	83	0	88
SRP_00172	-	0.35	0.34	0.36	31	38973	57	4	52	1	60
SRP_00173	Bacteria_large_SRP links to Rfam database...	0.79	0.80	0.78	72	38134	26	1	19	6	18
SRP_00174	Bacteria_large_SRP links to Rfam database...	0.80	0.81	0.79	70	38692	24	4	15	5	16
SRP_00175	Fungi_SRP links to Rfam database...	0.20	0.20	0.20	17	44468	68	11	55	2	67
SRP_00178	Plant_SRP links to Rfam database...	0.33	0.31	0.35	32	45661	60	2	58	0	70
SRP_00179	Plant_SRP links to Rfam database...	0.76	0.74	0.78	78	45956	26	4	18	4	27
SRP_00180	-	0.68	0.67	0.69	36	22526	29	3	13	13	18
SRP_00181	Plant_SRP links to Rfam database...	0.31	0.29	0.33	30	45964	62	2	60	0	72
SRP_00182	Plant_SRP links to Rfam database...	0.73	0.71	0.74	72	45959	28	3	22	3	29
SRP_00184	Plant_SRP links to Rfam database...	0.33	0.32	0.33	32	45960	66	5	59	2	68
SRP_00188	Plant_SRP links to Rfam database...	0.22	0.22	0.24	17	31053	55	3	52	0	62
SRP_00197	Archaea_SRP links to Rfam database...	0.21	0.20	0.24	20	49370	65	3	62	0	81
SRP_00198	Archaea_SRP links to Rfam database...	0.22	0.21	0.23	22	50943	75	7	68	0	81
SRP_00199	Archaea_SRP links to Rfam database...	0.65	0.65	0.65	68	50935	39	3	34	2	37
SRP_00201	Archaea_SRP links to Rfam database...	0.72	0.70	0.73	78	47788	31	1	28	2	33
SRP_00202	Archaea_SRP links to Rfam database...	0.87	0.86	0.87	101	54169	18	2	13	3	16
SRP_00203	Archaea_SRP links to Rfam database...	0.73	0.74	0.71	78	48718	41	1	31	9	27
SRP_00204	Archaea_SRP links to Rfam database...	0.66	0.67	0.65	68	49037	37	7	29	1	34
SRP_00206	Archaea_SRP links to Rfam database...	0.84	0.83	0.84	90	47788	18	5	12	1	18
SRP_00208	Archaea_SRP links to Rfam database...	0.64	0.62	0.66	63	46569	34	7	26	1	38
SRP_00228	Metazoa_SRP links to Rfam database...	0.96	0.95	0.97	90	45358	11	0	3	8	5
SRP_00230	Fungi_SRP links to Rfam database...	0.80	0.79	0.81	71	39533	20	1	16	3	19
SRP_00234	Bacteria_large_SRP links to Rfam database...	0.80	0.79	0.81	68	36231	22	0	16	6	18
SRP_00239	Plant_SRP links to Rfam database...	0.30	0.31	0.29	29	50304	71	17	53	1	64
SRP_00240	Plant_SRP links to Rfam database...	0.65	0.65	0.65	66	48103	43	3	33	7	36
SRP_00241	Plant_SRP links to Rfam database...	0.44	0.48	0.41	39	45961	58	14	42	2	43
SRP_00246	-	0.32	0.35	0.29	26	40952	70	9	54	7	48
SRP_00247	Metazoa_SRP links to Rfam database...	0.38	0.40	0.36	35	47181	66	11	51	4	52
SRP_00252	Metazoa_SRP links to Rfam database...	0.52	0.54	0.51	48	49047	49	9	37	3	41
SRP_00253	Metazoa_SRP links to Rfam database...	0.52	0.54	0.51	49	49358	54	9	39	6	41
SRP_00254	Fungi_SRP links to Rfam database...	0.48	0.52	0.44	32	32313	45	11	29	5	29
SRP_00255	Archaea_SRP links to Rfam database...	0.60	0.62	0.59	58	47487	45	2	39	4	36
SRP_00257	Metazoa_SRP links to Rfam database...	0.84	0.84	0.84	91	50932	19	3	14	2	17
SRP_00260	Metazoa_SRP links to Rfam database...	0.62	0.63	0.61	63	47791	44	5	36	3	37
SRP_00261	-	0.79	0.76	0.83	79	45356	18	0	16	2	25
SRP_00262	-	0.68	0.68	0.68	69	48415	32	4	28	0	32
SRP_00263	-	0.71	0.69	0.73	72	48417	28	7	20	1	32
SRP_00265	Fungi_SRP links to Rfam database...	0.59	0.63	0.55	46	41244	49	10	28	11	27
SRP_00267	Metazoa_SRP links to Rfam database...	0.82	0.82	0.82	79	44455	24	0	17	7	17
SRP_00276	Archaea_SRP links to Rfam database...	0.86	0.85	0.86	94	50612	16	5	10	1	16
SRP_00278	Archaea_SRP links to Rfam database...	0.67	0.68	0.66	71	45949	39	6	30	3	34
SRP_00282	Metazoa_SRP links to Rfam database...	0.30	0.37	0.25	23	43274	75	23	45	7	40
SRP_00286	Fungi_SRP links to Rfam database...	0.61	0.60	0.63	105	136858	71	3	60	8	69
SRP_00287	Fungi_SRP links to Rfam database...	0.58	0.57	0.60	92	141624	73	9	53	11	70
SRP_00290	Fungi_SRP links to Rfam database...	0.67	0.68	0.66	92	100436	58	3	45	10	43
SRP_00292	Fungi_SRP links to Rfam database...	0.50	0.49	0.52	85	137385	85	3	77	5	88
SRP_00294	Fungi_SRP links to Rfam database...	0.65	0.63	0.66	106	129125	59	6	49	4	61
SRP_00299	Metazoa_SRP links to Rfam database...	0.90	0.84	0.97	83	44167	10	0	3	7	16
SRP_00300	Metazoa_SRP links to Rfam database...	0.91	0.89	0.93	84	44163	11	0	6	5	10
SRP_00301	Fungi_SRP links to Rfam database...	0.87	0.87	0.87	75	32554	16	1	10	5	11
SRP_00302	Fungi_SRP links to Rfam database...	0.39	0.40	0.39	32	41533	59	10	41	8	49
SRP_00308	Bacteria_large_SRP links to Rfam database...	0.72	0.73	0.72	64	36226	26	2	23	1	24
SRP_00317	Metazoa_SRP links to Rfam database...	0.94	0.90	0.99	88	45061	8	0	1	7	10
SRP_00321	Archaea_SRP links to Rfam database...	0.56	0.56	0.55	61	47475	51	10	40	1	47
SRP_00322	Archaea_SRP links to Rfam database...	0.67	0.65	0.68	71	48412	34	1	32	1	38
SRP_00323	Archaea_SRP links to Rfam database...	0.81	0.80	0.82	86	47173	22	0	19	3	21
SRP_00328	Metazoa_SRP links to Rfam database...	0.62	0.64	0.61	54	39532	40	8	27	5	31
SRP_00329	Metazoa_SRP links to Rfam database...	0.57	0.58	0.57	49	39817	41	6	31	4	36
SRP_00330	Archaea_SRP links to Rfam database...	0.47	0.46	0.49	44	49996	47	4	42	1	51
SRP_00331	Metazoa_SRP links to Rfam database...	0.52	0.53	0.52	46	37586	45	7	36	2	41
SRP_00332	Archaea_SRP links to Rfam database...	0.70	0.71	0.69	75	50295	34	7	26	1	31
SRP_00335	Bacteria_large_SRP links to Rfam database...	0.31	0.44	0.22	17	35169	79	27	32	20	22
SRP_00336	-	0.24	0.25	0.23	19	38978	65	5	58	2	58
SRP_00337	Bacteria_large_SRP links to Rfam database...	0.75	0.75	0.76	68	35421	24	2	20	2	23
SRP_00339	Archaea_SRP links to Rfam database...	0.66	0.66	0.66	62	44457	36	2	30	4	32
SRP_00340	Metazoa_SRP links to Rfam database...	0.49	0.52	0.47	43	41236	52	9	40	3	39
SRP_00345	-	0.28	0.31	0.26	16	20644	49	12	34	3	36
SRP_00347	Metazoa_SRP links to Rfam database...	0.78	0.78	0.79	75	46570	23	4	16	3	21
SRP_00348	-	0.53	0.49	0.58	48	46888	35	5	30	0	50
SRP_00353	-	0.77	0.74	0.80	74	37857	20	2	17	1	26
SRP_00354	-	0.79	0.77	0.80	72	38691	21	0	18	3	21
SRP_00355	-	0.84	0.82	0.85	79	41812	18	2	12	4	17
SRP_00361	Plant_SRP links to Rfam database...	0.75	0.78	0.73	70	41809	33	5	21	7	20
SRP_00368	Metazoa_SRP links to Rfam database...	0.92	0.90	0.95	88	43863	9	0	5	4	10
SRP_00371	Fungi_SRP links to Rfam database...	0.78	0.79	0.77	65	36231	24	2	17	5	17
SRP_00382	Fungi_SRP links to Rfam database...	0.56	0.55	0.57	93	141614	79	7	64	8	77
TMR_00007	tmRNA links to Rfam database...	0.41	0.38	0.45	41	61684	56	8	43	5	67
TMR_00008	tmRNA links to Rfam database...	0.53	0.51	0.55	54	65968	51	12	32	7	52
TMR_00010	tmRNA links to Rfam database...	0.25	0.25	0.25	24	57874	76	8	64	4	72
TMR_00012	tmRNA links to Rfam database...	0.41	0.43	0.39	35	64531	70	19	35	16	46
TMR_00014	tmRNA links to Rfam database...	0.60	0.58	0.63	64	68533	48	13	25	10	46
TMR_00017	tmRNA links to Rfam database...	0.51	0.49	0.53	50	67067	50	10	34	6	52
TMR_00018	tmRNA links to Rfam database...	0.37	0.37	0.37	34	64527	63	11	48	4	58
TMR_00028	tmRNA links to Rfam database...	0.40	0.40	0.40	39	62738	61	8	50	3	58
TMR_00030	tmRNA links to Rfam database...	0.29	0.29	0.30	32	75747	81	12	64	5	79
TMR_00034	tmRNA links to Rfam database...	0.63	0.61	0.65	67	59928	43	7	29	7	43
TMR_00035	tmRNA links to Rfam database...	0.40	0.43	0.38	42	67784	72	25	45	2	56
TMR_00036	tmRNA links to Rfam database...	0.55	0.54	0.56	55	90427	69	13	30	26	46
TMR_00038	tmRNA links to Rfam database...	0.22	0.21	0.23	23	71154	80	9	67	4	87
TMR_00042	tmRNA links to Rfam database...	0.35	0.35	0.36	34	62740	64	3	58	3	64
TMR_00046	tmRNA links to Rfam database...	0.28	0.28	0.28	27	62740	72	11	57	4	69
TMR_00047	tmRNA links to Rfam database...	0.30	0.33	0.27	19	48446	67	15	36	16	38
TMR_00048	tmRNA links to Rfam database...	0.23	0.24	0.23	23	64880	83	15	62	6	72
TMR_00049	tmRNA links to Rfam database...	0.57	0.59	0.56	51	63099	53	10	30	13	36
TMR_00051	tmRNA links to Rfam database...	0.74	0.68	0.80	64	65623	37	3	13	21	30
TMR_00055	tmRNA links to Rfam database...	0.25	0.26	0.24	30	78878	95	21	74	0	84
TMR_00057	tmRNA links to Rfam database...	0.17	0.20	0.15	16	73810	106	24	70	12	63
TMR_00061	tmRNA links to Rfam database...	0.30	0.29	0.30	29	59589	76	9	58	9	70
TMR_00062	tmRNA links to Rfam database...	0.58	0.56	0.60	58	78509	53	7	32	14	46
TMR_00064	tmRNA links to Rfam database...	0.50	0.49	0.51	50	76930	48	22	26	0	53
TMR_00065	tmRNA links to Rfam database...	0.53	0.52	0.54	55	76534	48	13	34	1	51
TMR_00067	tmRNA links to Rfam database...	0.39	0.39	0.39	45	82099	71	10	61	0	69
TMR_00073	tmRNA links to Rfam database...	0.58	0.50	0.67	59	65615	30	4	25	1	58
TMR_00076	tmRNA links to Rfam database...	0.39	0.40	0.38	40	70770	74	16	50	8	60
TMR_00080	tmRNA links to Rfam database...	0.41	0.40	0.42	38	70409	53	14	39	0	58
TMR_00081	tmRNA links to Rfam database...	0.55	0.51	0.59	54	67070	38	10	27	1	52
TMR_00082	tmRNA links to Rfam database...	0.70	0.68	0.71	65	67805	31	8	18	5	31
TMR_00083	tmRNA links to Rfam database...	0.47	0.46	0.48	48	68164	60	13	40	7	57
TMR_00092	tmRNA links to Rfam database...	0.39	0.42	0.37	42	67413	77	17	56	4	59
TMR_00093	tmRNA links to Rfam database...	0.38	0.37	0.40	38	64165	65	13	45	7	64
TMR_00096	tmRNA links to Rfam database...	0.50	0.48	0.52	48	64887	55	11	34	10	52
TMR_00101	tmRNA links to Rfam database...	0.42	0.39	0.45	42	64167	61	11	41	9	65
TMR_00102	tmRNA links to Rfam database...	0.24	0.25	0.23	25	64154	85	14	68	3	76
TMR_00103	tmRNA links to Rfam database...	0.56	0.57	0.55	62	64149	54	11	39	4	46
TMR_00104	-	0.09	0.10	0.08	7	66710	83	25	53	5	63
TMR_00106	tmRNA links to Rfam database...	0.40	0.39	0.41	47	89985	72	13	55	4	73
TMR_00109	tmRNA links to Rfam database...	0.55	0.52	0.59	63	88303	48	8	36	4	59
TMR_00111	tmRNA links to Rfam database...	0.40	0.41	0.39	50	90397	81	18	60	3	72
TMR_00116	tmRNA links to Rfam database...	0.77	0.72	0.82	75	64888	31	5	12	14	29
TMR_00117	tmRNA links to Rfam database...	0.68	0.67	0.69	79	80086	44	6	29	9	39
TMR_00118	tmRNA links to Rfam database...	0.47	0.47	0.48	56	81290	67	6	54	7	64
TMR_00119	tmRNA links to Rfam database...	0.32	0.32	0.32	33	71906	75	9	62	4	71
TMR_00123	tmRNA links to Rfam database...	0.40	0.39	0.41	39	66335	61	11	45	5	62
TMR_00124	tmRNA links to Rfam database...	0.60	0.58	0.61	57	70407	50	11	25	14	41
TMR_00125	tmRNA links to Rfam database...	0.39	0.39	0.39	39	64161	65	12	49	4	60
TMR_00127	tmRNA links to Rfam database...	0.48	0.47	0.48	46	62740	59	4	45	10	51
TMR_00128	tmRNA links to Rfam database...	0.39	0.40	0.40	38	60979	58	17	41	0	58
TMR_00131	tmRNA links to Rfam database...	0.47	0.43	0.51	43	64895	50	3	39	8	56
TMR_00135	tmRNA links to Rfam database...	0.33	0.33	0.33	33	62735	74	15	52	7	66
TMR_00136	tmRNA links to Rfam database...	0.21	0.22	0.21	22	74588	84	18	63	3	79
TMR_00137	tmRNA links to Rfam database...	0.22	0.21	0.22	19	60990	74	9	57	8	70
TMR_00139	tmRNA links to Rfam database...	0.60	0.64	0.56	58	62025	51	19	26	6	33
TMR_00140	tmRNA links to Rfam database...	0.52	0.52	0.52	52	73820	64	4	44	16	48
TMR_00142	tmRNA links to Rfam database...	0.50	0.51	0.50	52	70771	65	10	43	12	50
TMR_00143	tmRNA links to Rfam database...	0.48	0.48	0.48	49	64518	63	9	44	10	54
TMR_00144	tmRNA links to Rfam database...	0.26	0.26	0.25	27	74199	84	17	62	5	76
TMR_00146	tmRNA links to Rfam database...	0.83	0.88	0.79	37	32084	36	6	4	26	5
TMR_00148	tmRNA links to Rfam database...	0.69	0.88	0.54	15	27702	47	9	4	34	2
TMR_00150	tmRNA links to Rfam database...	0.73	0.71	0.75	30	43031	43	1	9	33	12
TMR_00152	tmRNA links to Rfam database...	0.27	0.26	0.28	30	81298	88	12	66	10	85
TMR_00155	tmRNA links to Rfam database...	0.57	0.54	0.61	56	61684	46	5	31	10	48
TMR_00156	tmRNA links to Rfam database...	0.38	0.35	0.41	34	60295	53	5	44	4	63
TMR_00158	tmRNA links to Rfam database...	0.50	0.48	0.53	48	60635	47	6	37	4	51
TMR_00159	tmRNA links to Rfam database...	0.57	0.58	0.57	53	62035	53	10	30	13	39
TMR_00160	tmRNA links to Rfam database...	0.45	0.44	0.45	42	64527	59	14	37	8	53
TMR_00164	tmRNA links to Rfam database...	0.42	0.42	0.42	44	66691	70	7	53	10	62
TMR_00165	tmRNA links to Rfam database...	0.32	0.31	0.33	30	61686	69	8	52	9	67
TMR_00166	tmRNA links to Rfam database...	0.46	0.43	0.51	43	61691	48	6	36	6	58
TMR_00168	tmRNA links to Rfam database...	0.72	0.68	0.76	78	60972	26	0	25	1	36
TMR_00173	tmRNA links to Rfam database...	0.36	0.36	0.36	15	42153	55	10	17	28	27
TMR_00179	tmRNA links to Rfam database...	0.61	0.58	0.64	57	67072	46	6	26	14	41
TMR_00180	tmRNA links to Rfam database...	0.66	0.66	0.66	65	67062	52	6	28	18	34
TMR_00182	tmRNA links to Rfam database...	0.17	0.17	0.17	17	66330	87	12	71	4	85
TMR_00183	tmRNA links to Rfam database...	0.25	0.24	0.25	25	63091	79	5	69	5	78
TMR_00184	tmRNA links to Rfam database...	0.43	0.42	0.43	43	63091	66	3	53	10	59
TMR_00193	tmRNA links to Rfam database...	0.40	0.41	0.40	33	59257	61	9	41	11	47
TMR_00194	tmRNA links to Rfam database...	0.42	0.42	0.43	39	62744	60	10	42	8	54
TMR_00196	tmRNA links to Rfam database...	0.38	0.35	0.41	34	60992	54	8	41	5	63
TMR_00199	tmRNA links to Rfam database...	0.55	0.57	0.54	52	62739	53	18	26	9	40
TMR_00200	-	0.60	0.52	0.68	39	41559	29	2	16	11	36
TMR_00204	tmRNA links to Rfam database...	0.44	0.41	0.47	40	60292	52	20	26	6	57
TMR_00207	tmRNA links to Rfam database...	0.29	0.28	0.30	29	72294	71	7	60	4	74
TMR_00223	tmRNA links to Rfam database...	0.26	0.26	0.26	25	64165	75	16	55	4	70
TMR_00224	tmRNA links to Rfam database...	0.42	0.38	0.46	38	64898	50	4	40	6	63
TMR_00226	tmRNA links to Rfam database...	0.46	0.47	0.46	49	69645	63	10	47	6	56
TMR_00227	tmRNA links to Rfam database...	0.35	0.36	0.34	36	70018	76	11	60	5	65
TMR_00228	tmRNA links to Rfam database...	0.31	0.32	0.30	35	88292	88	20	63	5	73
TMR_00234	tmRNA links to Rfam database...	0.31	0.32	0.31	33	58889	77	12	62	3	69
TMR_00238	tmRNA links to Rfam database...	0.32	0.33	0.32	33	84562	79	13	58	8	68
TMR_00239	tmRNA links to Rfam database...	0.50	0.50	0.49	48	61679	53	8	41	4	48
TMR_00240	tmRNA links to Rfam database...	0.61	0.58	0.64	49	63113	34	6	22	6	36
TMR_00246	-	0.54	0.59	0.50	20	78170	106	4	16	86	14
TMR_00248	tmRNA links to Rfam database...	0.14	0.18	0.11	7	54223	96	23	32	41	31
TMR_00257	tmRNA links to Rfam database...	0.12	0.11	0.12	11	67072	82	7	71	4	87
TMR_00259	tmRNA links to Rfam database...	0.56	0.55	0.58	57	67797	45	10	32	3	46
TMR_00261	tmRNA links to Rfam database...	0.58	0.58	0.57	59	66691	48	13	32	3	42
TMR_00262	tmRNA links to Rfam database...	0.57	0.57	0.58	59	74203	47	17	26	4	45
TMR_00271	tmRNA links to Rfam database...	0.64	0.60	0.67	55	64179	37	6	21	10	36
TMR_00274	tmRNA links to Rfam database...	0.31	0.30	0.31	32	66691	78	12	60	6	73
TMR_00278	tmRNA links to Rfam database...	0.51	0.51	0.51	52	67795	62	5	44	13	50
TMR_00279	tmRNA links to Rfam database...	0.57	0.57	0.56	54	68910	53	7	35	11	40
TMR_00280	tmRNA links to Rfam database...	0.51	0.50	0.51	51	65966	67	3	46	18	50
TMR_00283	tmRNA links to Rfam database...	0.50	0.48	0.53	46	65254	50	2	39	9	50
TMR_00289	tmRNA links to Rfam database...	0.57	0.56	0.58	55	67066	53	5	35	13	43
TMR_00290	tmRNA links to Rfam database...	0.48	0.48	0.48	44	64170	61	2	45	14	48
TMR_00296	tmRNA links to Rfam database...	0.28	0.28	0.28	27	68911	73	16	52	5	71
TMR_00298	tmRNA links to Rfam database...	0.50	0.51	0.49	52	68158	64	10	45	9	49
TMR_00300	tmRNA links to Rfam database...	0.55	0.55	0.55	62	70387	62	11	40	11	50
TMR_00301	tmRNA links to Rfam database...	0.42	0.43	0.41	41	82114	65	16	44	5	55
TMR_00302	tmRNA links to Rfam database...	0.29	0.30	0.28	28	77321	79	25	47	7	66
TMR_00305	tmRNA links to Rfam database...	0.68	0.64	0.72	65	60985	33	8	17	8	37
TMR_00306	tmRNA links to Rfam database...	0.45	0.43	0.46	46	64161	56	12	42	2	60
TMR_00310	tmRNA links to Rfam database...	0.37	0.36	0.38	35	63810	67	11	47	9	63
TMR_00317	tmRNA links to Rfam database...	0.65	0.64	0.66	65	68166	40	10	24	6	37
TMR_00331	tmRNA links to Rfam database...	0.68	0.72	0.65	59	66704	43	8	24	11	23
TMR_00332	tmRNA links to Rfam database...	0.49	0.43	0.54	43	67082	41	7	29	5	56
TMR_00334	tmRNA links to Rfam database...	0.68	0.62	0.74	63	66710	33	4	18	11	38
TMR_00337	tmRNA links to Rfam database...	0.55	0.52	0.58	62	82921	49	12	33	4	57
TMR_00340	tmRNA links to Rfam database...	0.52	0.52	0.52	42	64180	55	9	30	16	39
TMR_00341	tmRNA links to Rfam database...	0.35	0.37	0.33	34	63088	71	16	52	3	58
TMR_00343	tmRNA links to Rfam database...	0.48	0.44	0.53	46	64893	50	4	37	9	59
TMR_00345	tmRNA links to Rfam database...	0.66	0.64	0.67	67	63803	41	6	27	8	37
TMR_00346	tmRNA links to Rfam database...	0.26	0.26	0.27	24	64172	72	13	52	7	70
TMR_00348	tmRNA links to Rfam database...	0.25	0.24	0.27	24	77332	82	10	55	17	75
TMR_00352	tmRNA links to Rfam database...	0.36	0.40	0.32	30	95172	97	18	46	33	45
TMR_00353	tmRNA links to Rfam database...	0.44	0.47	0.42	49	84138	81	20	48	13	56
TMR_00357	tmRNA links to Rfam database...	0.40	0.37	0.44	34	82951	59	14	29	16	58
TMR_00358	tmRNA links to Rfam database...	0.47	0.46	0.47	46	74980	56	27	25	4	53
TMR_00361	-	0.29	0.33	0.26	24	93436	86	20	48	18	48
TMR_00366	tmRNA links to Rfam database...	0.51	0.51	0.52	51	67798	58	12	35	11	49
TMR_00372	tmRNA links to Rfam database...	0.61	0.61	0.61	59	70404	54	6	31	17	37
TMR_00374	tmRNA links to Rfam database...	0.27	0.26	0.29	24	81727	74	10	49	15	68
TMR_00375	tmRNA links to Rfam database...	0.53	0.52	0.54	51	73441	51	11	33	7	47
TMR_00376	tmRNA links to Rfam database...	0.69	0.67	0.70	64	74600	45	13	14	18	31
TMR_00378	tmRNA links to Rfam database...	0.26	0.25	0.28	24	67810	73	14	48	11	73
TMR_00383	tmRNA links to Rfam database...	0.41	0.41	0.41	41	66695	67	12	47	8	59
TMR_00384	tmRNA links to Rfam database...	0.30	0.29	0.31	31	65604	75	3	65	7	77
TMR_00393	tmRNA links to Rfam database...	0.60	0.62	0.58	33	53244	54	6	18	30	20
TMR_00395	tmRNA links to Rfam database...	0.51	0.49	0.54	53	64522	49	6	39	4	56
TMR_00398	tmRNA links to Rfam database...	0.45	0.43	0.47	46	65244	55	2	49	4	60
TMR_00399	tmRNA links to Rfam database...	0.35	0.34	0.36	32	64892	62	12	44	6	62
TMR_00404	tmRNA links to Rfam database...	0.37	0.40	0.35	37	67422	80	26	43	11	55
TMR_00408	tmRNA links to Rfam database...	0.58	0.60	0.56	53	65972	55	13	28	14	35
TMR_00409	tmRNA links to Rfam database...	0.85	0.85	0.85	39	68589	65	1	6	58	7
TMR_00411	tmRNA links to Rfam database...	0.66	0.67	0.66	58	60987	41	12	18	11	29
TMR_00415	tmRNA links to Rfam database...	0.44	0.44	0.45	44	67064	56	8	45	3	57
TMR_00419	tmRNA links to Rfam database...	0.56	0.51	0.61	57	81717	54	6	30	18	54
TMR_00422	tmRNA links to Rfam database...	0.51	0.52	0.51	48	67801	60	9	38	13	44
TMR_00423	tmRNA links to Rfam database...	0.08	0.10	0.08	7	63810	95	19	67	9	66
TMR_00427	tmRNA links to Rfam database...	0.34	0.32	0.36	31	67441	61	13	43	5	66
TMR_00429	tmRNA links to Rfam database...	0.56	0.52	0.59	57	74595	48	7	32	9	52
TMR_00430	tmRNA links to Rfam database...	0.27	0.27	0.27	29	82513	79	17	62	0	80
TMR_00431	tmRNA links to Rfam database...	0.68	0.69	0.68	38	51947	65	5	13	47	17
TMR_00432	tmRNA links to Rfam database...	0.38	0.38	0.38	40	79694	73	11	55	7	64
TMR_00433	tmRNA links to Rfam database...	0.50	0.48	0.52	51	80102	48	5	42	1	55
TMR_00439	tmRNA links to Rfam database...	0.48	0.50	0.46	51	68524	70	21	39	10	50
TMR_00441	tmRNA links to Rfam database...	0.11	0.12	0.11	10	62033	94	24	61	9	73
TMR_00443	tmRNA links to Rfam database...	0.54	0.51	0.57	53	67068	47	11	29	7	51
TMR_00448	tmRNA links to Rfam database...	0.34	0.33	0.36	30	62045	59	4	49	6	62
TMR_00451	tmRNA links to Rfam database...	0.18	0.19	0.18	17	63449	84	20	60	4	72
TMR_00457	tmRNA links to Rfam database...	0.40	0.38	0.42	39	78513	58	15	39	4	63
TMR_00458	tmRNA links to Rfam database...	0.46	0.46	0.46	43	63453	57	9	41	7	50
TMR_00460	tmRNA links to Rfam database...	0.46	0.43	0.49	46	79307	57	11	37	9	60
TMR_00465	tmRNA links to Rfam database...	0.26	0.28	0.25	26	64159	80	27	49	4	68
TMR_00469	tmRNA links to Rfam database...	0.53	0.53	0.52	53	64519	52	17	31	4	47
TMR_00472	tmRNA links to Rfam database...	0.42	0.40	0.44	39	64532	60	8	41	11	58
TMR_00478	tmRNA links to Rfam database...	0.19	0.20	0.17	20	71895	100	19	76	5	79
TMR_00498	tmRNA links to Rfam database...	0.33	0.35	0.32	35	68896	84	16	59	9	64
TMR_00499	tmRNA links to Rfam database...	0.21	0.21	0.20	21	64517	89	8	74	7	78
TMR_00501	tmRNA links to Rfam database...	0.44	0.46	0.43	42	62383	58	12	44	2	50
TMR_00502	tmRNA links to Rfam database...	0.22	0.24	0.21	22	75359	94	18	67	9	71
TMR_00503	tmRNA links to Rfam database...	0.43	0.41	0.45	46	67793	66	4	53	9	65
TMR_00519	tmRNA links to Rfam database...	0.39	0.39	0.40	37	63098	66	12	43	11	58
TMR_00520	tmRNA links to Rfam database...	0.52	0.52	0.53	51	63094	55	14	31	10	48
TMR_00522	tmRNA links to Rfam database...	0.39	0.39	0.40	38	63095	66	13	44	9	59
TMR_00528	tmRNA links to Rfam database...	0.30	0.29	0.32	28	63102	70	16	44	10	69
TMR_00540	tmRNA links to Rfam database...	0.44	0.41	0.47	43	73444	60	11	38	11	61
TMR_00541	tmRNA links to Rfam database...	0.40	0.40	0.40	42	61671	72	3	60	9	63
TMR_00544	tmRNA links to Rfam database...	0.54	0.52	0.55	56	89575	55	8	37	10	52
TMR_00547	tmRNA links to Rfam database...	0.39	0.39	0.39	39	65240	64	6	56	2	61
TMR_00553	tmRNA links to Rfam database...	0.40	0.38	0.42	31	48131	49	5	38	6	50
TMR_00559	tmRNA links to Rfam database...	0.39	0.38	0.40	38	62386	61	10	47	4	63
TMR_00560	tmRNA links to Rfam database...	0.57	0.54	0.60	53	60987	46	4	31	11	45
TMR_00562	tmRNA links to Rfam database...	0.32	0.31	0.33	32	72673	72	11	55	6	70
TMR_00563	tmRNA links to Rfam database...	0.64	0.61	0.67	63	75372	43	9	22	12	40
TMR_00566	tmRNA links to Rfam database...	0.67	0.60	0.74	60	60645	32	2	19	11	40
TMR_00568	tmRNA links to Rfam database...	0.36	0.34	0.38	34	60636	62	4	52	6	65
TMR_00570	tmRNA links to Rfam database...	0.57	0.55	0.60	53	60289	48	5	31	12	44
TMR_00571	tmRNA links to Rfam database...	0.66	0.61	0.71	60	60642	38	2	22	14	39
TMR_00576	tmRNA links to Rfam database...	0.62	0.61	0.63	62	60279	47	13	24	10	40
TMR_00579	tmRNA links to Rfam database...	0.25	0.28	0.22	25	80488	98	18	70	10	65
TMR_00580	tmRNA links to Rfam database...	0.68	0.64	0.72	64	60637	36	2	23	11	36
TMR_00581	tmRNA links to Rfam database...	0.24	0.21	0.26	21	62401	64	2	57	5	77
TMR_00584	tmRNA links to Rfam database...	0.59	0.57	0.61	55	60985	47	3	32	12	42
TMR_00586	tmRNA links to Rfam database...	0.50	0.49	0.51	48	60980	57	8	39	10	49
TMR_00587	tmRNA links to Rfam database...	0.60	0.57	0.63	57	61334	40	6	28	6	43
TMR_00588	tmRNA links to Rfam database...	0.26	0.27	0.25	27	77312	89	22	60	7	74
TMR_00594	tmRNA links to Rfam database...	0.14	0.14	0.13	15	79285	106	24	77	5	89
TMR_00596	tmRNA links to Rfam database...	0.30	0.28	0.32	27	78125	73	12	46	15	68
TMR_00599	tmRNA links to Rfam database...	0.24	0.28	0.22	20	63097	79	26	47	6	52
TMR_00600	tmRNA links to Rfam database...	0.33	0.33	0.32	38	79682	82	12	68	2	77
TMR_00601	tmRNA links to Rfam database...	0.31	0.29	0.33	12	58960	76	7	17	52	30
TMR_00603	tmRNA links to Rfam database...	0.67	0.60	0.74	26	60343	67	1	8	58	17
TMR_00604	tmRNA links to Rfam database...	0.65	0.63	0.67	71	62729	35	4	31	0	41
TMR_00605	tmRNA links to Rfam database...	0.54	0.52	0.57	56	74207	47	14	28	5	52
TMR_00606	tmRNA links to Rfam database...	0.42	0.41	0.44	44	68905	64	5	52	7	63
TMR_00609	tmRNA links to Rfam database...	0.70	0.67	0.72	76	63441	39	2	27	10	37
TMR_00610	tmRNA links to Rfam database...	0.62	0.63	0.63	65	62024	51	7	32	12	39
TMR_00611	tmRNA links to Rfam database...	0.44	0.45	0.43	46	61317	62	13	49	0	56
TMR_00612	tmRNA links to Rfam database...	0.36	0.37	0.35	38	60617	75	9	62	4	66
TMR_00614	tmRNA links to Rfam database...	0.72	0.69	0.75	72	60979	33	2	22	9	32
TMR_00615	tmRNA links to Rfam database...	0.68	0.63	0.73	60	63821	33	8	14	11	36
TMR_00616	tmRNA links to Rfam database...	0.41	0.40	0.41	40	67064	62	12	45	5	59
TMR_00617	tmRNA links to Rfam database...	0.46	0.50	0.43	29	34648	49	13	26	10	29
TMR_00623	tmRNA links to Rfam database...	0.44	0.44	0.45	47	61321	63	2	55	6	61
TMR_00624	tmRNA links to Rfam database...	0.71	0.69	0.73	75	62378	40	6	22	12	33
TMR_00625	tmRNA links to Rfam database...	0.41	0.42	0.39	45	78888	79	19	51	9	61
TMR_00626	tmRNA links to Rfam database...	0.23	0.23	0.23	25	67787	88	12	72	4	84
TMR_00680	tmRNA links to Rfam database...	0.36	0.36	0.35	36	67793	75	11	56	8	63
TMR_00681	tmRNA links to Rfam database...	0.38	0.36	0.39	35	65977	62	8	46	8	62
TMR_00683	tmRNA links to Rfam database...	0.17	0.18	0.15	18	82911	108	17	82	9	82
TMR_00686	tmRNA links to Rfam database...	0.44	0.45	0.42	49	71137	78	16	51	11	59
TMR_00687	tmRNA links to Rfam database...	0.56	0.53	0.59	59	71531	51	11	30	10	52
TMR_00696	tmRNA links to Rfam database...	0.16	0.16	0.17	18	84971	101	12	77	12	96
TMR_00698	tmRNA links to Rfam database...	0.47	0.45	0.50	47	63096	50	11	36	3	57
TMR_00699	tmRNA links to Rfam database...	0.49	0.44	0.55	45	67079	42	4	33	5	57
TMR_00702	tmRNA links to Rfam database...	0.39	0.36	0.42	36	67075	55	12	38	5	64
TMR_00703	tmRNA links to Rfam database...	0.50	0.49	0.52	49	67433	51	6	40	5	50
TMR_00706	tmRNA links to Rfam database...	0.59	0.56	0.62	58	66336	39	7	29	3	45
TMR_00711	tmRNA links to Rfam database...	0.61	0.61	0.60	60	67796	45	13	27	5	38
TMR_00712	tmRNA links to Rfam database...	0.30	0.31	0.30	34	78491	84	13	68	3	75
TMR_00716	tmRNA links to Rfam database...	0.32	0.31	0.33	31	62741	67	12	51	4	69

^top

Performance of RNAwolf - scored lower in this pairwise comparison

1. Total counts & total scores for RNAwolf

Total Base Pair Counts
Total TP	29006
Total TN	55978736
Total FP	71656
Total FP CONTRA	11064
Total FP INCONS	49108
Total FP COMP	11484
Total FN	52624

Total Scores
MCC	0.339
Average MCC ± 95% Confidence Intervals	0.340 ± 0.011
Sensitivity	0.355
Positive Predictive Value	0.325
Nr of predictions	818

^top

2. Individual counts for RNAwolf [ download as .csv ]

RNA Chain	Rfam family	MCC	SENS	PPV	TP	TN	FP	FP CONTRA	FP INCONS	FP COMP	FN
ASE_00001	RNaseP_arch links to Rfam database...	0.76	0.73	0.80	55	34122	33	1	13	19	20
ASE_00002	RNaseP_arch links to Rfam database...	0.56	0.53	0.58	39	35444	45	2	26	17	34
ASE_00004	RNaseP_bact_a links to Rfam database...	0.51	0.51	0.51	49	47799	61	8	39	14	48
ASE_00005	RNaseP_bact_a links to Rfam database...	0.46	0.46	0.47	54	57854	68	12	50	6	63
ASE_00006	RNaseP_bact_a links to Rfam database...	0.32	0.33	0.30	31	47484	83	10	61	12	62
ASE_00007	RNaseP_bact_a links to Rfam database...	0.30	0.30	0.31	33	59577	81	11	64	6	77
ASE_00009	RNaseP_arch links to Rfam database...	0.39	0.39	0.40	26	26041	48	4	35	9	41
ASE_00010	RNaseP_bact_b links to Rfam database...	0.34	0.38	0.32	31	49672	74	15	52	7	51
ASE_00012	RNaseP_bact_a links to Rfam database...	0.54	0.54	0.54	67	73797	68	5	51	12	56
ASE_00014	RNaseP_arch links to Rfam database...	0.36	0.38	0.35	40	54171	80	16	58	6	66
ASE_00016	-	0.43	0.46	0.40	28	65996	99	9	33	57	33
ASE_00017	RNaseP_nuc links to Rfam database...	0.11	0.13	0.10	8	50962	92	14	56	22	56
ASE_00018	RNaseP_bact_a links to Rfam database...	0.53	0.54	0.53	72	80465	72	4	60	8	62
ASE_00020	RNaseP_bact_a links to Rfam database...	0.63	0.62	0.64	78	73799	56	6	37	13	48
ASE_00021	RNaseP_bact_a links to Rfam database...	0.45	0.44	0.46	70	104045	94	7	74	13	90
ASE_00022	RNaseP_bact_b links to Rfam database...	0.45	0.45	0.44	56	82901	79	9	62	8	68
ASE_00023	RNaseP_bact_a links to Rfam database...	0.48	0.50	0.46	63	84117	87	12	63	12	64
ASE_00024	-	0.57	0.54	0.59	38	29339	46	1	25	20	32
ASE_00025	RNaseP_nuc links to Rfam database...	0.26	0.30	0.24	21	78517	111	23	45	43	50
ASE_00026	RNaseP_bact_a links to Rfam database...	0.41	0.42	0.41	46	59573	75	6	60	9	64
ASE_00028	RNaseP_bact_b links to Rfam database...	0.46	0.47	0.45	59	84536	90	9	62	19	67
ASE_00029	RNaseP_bact_a links to Rfam database...	0.27	0.29	0.26	35	82894	112	15	84	13	87
ASE_00030	RNaseP_bact_a links to Rfam database...	0.49	0.46	0.52	67	85361	72	6	57	9	78
ASE_00031	RNaseP_bact_a links to Rfam database...	0.46	0.46	0.46	58	86609	81	8	61	12	68
ASE_00032	RNaseP_bact_a links to Rfam database...	0.32	0.31	0.33	37	80087	93	2	74	17	81
ASE_00033	RNaseP_bact_a links to Rfam database...	0.11	0.12	0.11	14	64857	111	8	101	2	107
ASE_00035	RNaseP_bact_a links to Rfam database...	0.22	0.23	0.22	27	70375	102	22	76	4	91
ASE_00036	RNaseP_bact_a links to Rfam database...	0.42	0.42	0.43	55	75728	79	4	68	7	77
ASE_00037	RNaseP_bact_a links to Rfam database...	0.36	0.35	0.39	38	59242	67	8	52	7	72
ASE_00038	RNaseP_bact_a links to Rfam database...	0.41	0.41	0.41	41	53529	66	7	51	8	60
ASE_00040	RNaseP_bact_a links to Rfam database...	0.31	0.32	0.30	43	78860	110	16	84	10	90
ASE_00041	RNaseP_bact_a links to Rfam database...	0.37	0.36	0.39	39	57530	71	7	54	10	69
ASE_00042	RNaseP_bact_a links to Rfam database...	0.31	0.31	0.31	45	89957	109	9	89	11	100
ASE_00044	RNaseP_bact_a links to Rfam database...	0.48	0.48	0.48	50	54511	71	5	49	17	55
ASE_00045	RNaseP_bact_b links to Rfam database...	0.35	0.35	0.35	28	47197	69	6	47	16	52
ASE_00046	RNaseP_bact_a links to Rfam database...	0.21	0.21	0.22	22	50301	81	6	74	1	81
ASE_00047	RNaseP_bact_a links to Rfam database...	0.12	0.12	0.12	15	74178	121	5	107	9	115
ASE_00052	RNaseP_bact_a links to Rfam database...	0.17	0.17	0.17	19	61315	94	14	77	3	93
ASE_00053	RNaseP_bact_a links to Rfam database...	0.44	0.44	0.44	58	79269	85	12	62	11	75
ASE_00056	-	0.41	0.40	0.43	29	30808	57	6	33	18	43
ASE_00057	RNaseP_bact_a links to Rfam database...	0.53	0.53	0.54	71	82083	73	6	55	12	63
ASE_00064	RNaseP_bact_a links to Rfam database...	0.19	0.19	0.19	17	45361	82	13	60	9	72
ASE_00066	RNaseP_bact_a links to Rfam database...	0.50	0.51	0.49	66	72254	74	7	63	4	64
ASE_00068	RNaseP_bact_a links to Rfam database...	0.38	0.38	0.38	32	37591	57	8	44	5	53
ASE_00069	RNaseP_bact_a links to Rfam database...	0.57	0.56	0.58	78	82893	67	8	49	10	62
ASE_00074	RNaseP_bact_a links to Rfam database...	0.36	0.36	0.37	43	67779	81	9	65	7	76
ASE_00075	RNaseP_bact_a links to Rfam database...	0.59	0.57	0.60	93	108656	77	7	55	15	69
ASE_00076	RNaseP_bact_a links to Rfam database...	0.43	0.43	0.44	51	68148	77	10	56	11	67
ASE_00077	RNaseP_bact_a links to Rfam database...	0.36	0.37	0.35	32	45059	70	15	44	11	54
ASE_00078	RNaseP_bact_a links to Rfam database...	0.28	0.29	0.27	24	42983	71	8	56	7	59
ASE_00079	RNaseP_bact_a links to Rfam database...	0.47	0.47	0.48	47	55513	64	7	44	13	53
ASE_00080	RNaseP_bact_a links to Rfam database...	0.36	0.37	0.36	45	71507	88	5	74	9	78
ASE_00081	RNaseP_bact_a links to Rfam database...	0.21	0.22	0.21	21	49668	87	9	72	6	76
ASE_00082	RNaseP_bact_a links to Rfam database...	0.44	0.46	0.43	53	70377	86	8	62	16	63
ASE_00083	RNaseP_bact_a links to Rfam database...	0.29	0.29	0.28	32	62368	94	11	70	13	78
ASE_00084	RNaseP_bact_a links to Rfam database...	0.59	0.61	0.57	60	53523	55	7	38	10	39
ASE_00087	RNaseP_bact_a links to Rfam database...	0.29	0.28	0.31	41	88276	102	8	85	9	103
ASE_00089	-	0.46	0.47	0.45	37	31293	54	3	42	9	42
ASE_00090	RNaseP_bact_a links to Rfam database...	0.32	0.33	0.31	33	55504	91	4	70	17	68
ASE_00092	RNaseP_bact_a links to Rfam database...	0.51	0.52	0.50	59	63428	75	11	48	16	54
ASE_00096	RNaseP_bact_a links to Rfam database...	0.62	0.64	0.60	74	63422	58	13	37	8	41
ASE_00099	RNaseP_bact_a links to Rfam database...	0.56	0.55	0.56	66	64503	67	3	48	16	54
ASE_00100	RNaseP_nuc links to Rfam database...	0.22	0.24	0.20	18	82127	121	13	57	51	58
ASE_00102	RNaseP_bact_a links to Rfam database...	0.52	0.51	0.54	85	117697	89	7	66	16	81
ASE_00104	RNaseP_bact_a links to Rfam database...	0.40	0.39	0.41	46	64148	80	2	65	13	73
ASE_00105	RNaseP_bact_a links to Rfam database...	0.57	0.57	0.57	63	64151	57	10	37	10	48
ASE_00107	RNaseP_bact_a links to Rfam database...	0.51	0.53	0.50	67	73020	74	9	57	8	60
ASE_00108	RNaseP_nuc links to Rfam database...	0.19	0.22	0.16	14	46885	92	14	58	20	49
ASE_00111	RNaseP_nuc links to Rfam database...	0.20	0.25	0.17	14	50002	85	25	45	15	43
ASE_00112	RNaseP_bact_a links to Rfam database...	0.55	0.56	0.53	65	75344	66	4	53	9	51
ASE_00114	RNaseP_bact_b links to Rfam database...	0.32	0.35	0.30	27	45361	77	8	55	14	50
ASE_00115	RNaseP_bact_a links to Rfam database...	0.28	0.29	0.28	29	54512	85	6	68	11	72
ASE_00116	RNaseP_arch links to Rfam database...	0.05	0.06	0.05	4	31549	79	14	59	6	62
ASE_00118	RNaseP_bact_a links to Rfam database...	0.28	0.30	0.26	31	60607	93	9	79	5	71
ASE_00119	RNaseP_bact_a links to Rfam database...	0.52	0.53	0.50	57	62722	71	10	46	15	51
ASE_00120	RNaseP_arch links to Rfam database...	0.20	0.20	0.20	19	46877	79	15	60	4	75
ASE_00121	RNaseP_arch links to Rfam database...	0.15	0.15	0.14	14	45052	88	10	74	4	78
ASE_00122	RNaseP_bact_a links to Rfam database...	0.36	0.36	0.35	32	43274	62	12	47	3	56
ASE_00123	RNaseP_bact_a links to Rfam database...	0.46	0.48	0.45	41	38412	58	9	41	8	44
ASE_00125	RNaseP_bact_a links to Rfam database...	0.48	0.48	0.48	42	39252	53	12	34	7	46
ASE_00126	RNaseP_bact_a links to Rfam database...	0.43	0.44	0.42	36	40385	59	9	40	10	46
ASE_00128	RNaseP_bact_a links to Rfam database...	0.45	0.46	0.43	46	53195	70	6	54	10	54
ASE_00129	RNaseP_bact_a links to Rfam database...	0.34	0.35	0.33	39	62716	87	8	72	7	72
ASE_00131	RNaseP_bact_a links to Rfam database...	0.47	0.46	0.48	39	39258	54	10	33	11	46
ASE_00132	RNaseP_bact_a links to Rfam database...	0.42	0.43	0.42	41	50305	63	13	44	6	54
ASE_00134	RNaseP_bact_a links to Rfam database...	0.49	0.49	0.48	47	50305	59	8	43	8	48
ASE_00135	RNaseP_bact_a links to Rfam database...	0.45	0.46	0.45	50	63078	74	12	50	12	59
ASE_00136	RNaseP_bact_a links to Rfam database...	0.27	0.27	0.27	25	48112	84	4	64	16	67
ASE_00137	RNaseP_bact_a links to Rfam database...	0.47	0.49	0.45	48	48410	75	3	55	17	50
ASE_00138	RNaseP_bact_a links to Rfam database...	0.54	0.56	0.54	45	40386	55	6	33	16	36
ASE_00139	RNaseP_bact_a links to Rfam database...	0.56	0.55	0.57	57	54185	52	7	36	9	47
ASE_00140	RNaseP_bact_a links to Rfam database...	0.51	0.50	0.52	62	70757	67	7	50	10	63
ASE_00142	RNaseP_bact_a links to Rfam database...	0.28	0.28	0.27	34	67037	95	13	77	5	88
ASE_00144	-	0.22	0.23	0.21	22	58207	84	16	66	2	75
ASE_00145	RNaseP_arch links to Rfam database...	0.24	0.25	0.24	28	70006	101	8	83	10	83
ASE_00146	RNaseP_bact_a links to Rfam database...	0.42	0.43	0.42	53	70749	81	12	62	7	71
ASE_00148	RNaseP_arch links to Rfam database...	0.36	0.36	0.36	56	112419	106	14	86	6	98
ASE_00151	RNaseP_bact_a links to Rfam database...	0.62	0.61	0.63	60	51908	47	9	26	12	38
ASE_00153	RNaseP_nuc links to Rfam database...	0.33	0.38	0.29	28	57534	96	15	53	28	45
ASE_00154	RNaseP_arch links to Rfam database...	0.42	0.42	0.43	45	65236	73	8	52	13	62
ASE_00155	RNaseP_arch links to Rfam database...	0.41	0.42	0.41	59	93384	92	4	81	7	83
ASE_00159	-	0.21	0.21	0.21	13	34917	77	2	48	27	48
ASE_00160	-	0.37	0.40	0.34	20	23812	60	5	34	21	30
ASE_00161	RNaseP_bact_b links to Rfam database...	0.34	0.37	0.31	32	53525	82	7	64	11	55
ASE_00163	RNaseP_bact_a links to Rfam database...	0.40	0.40	0.40	37	53208	82	0	56	26	56
ASE_00165	RNaseP_bact_a links to Rfam database...	0.17	0.18	0.17	18	52870	93	10	77	6	83
ASE_00168	RNaseP_nuc links to Rfam database...	0.08	0.09	0.07	6	60637	105	22	61	22	58
ASE_00169	RNaseP_bact_a links to Rfam database...	0.51	0.50	0.51	54	57185	70	5	47	18	53
ASE_00170	RNaseP_bact_a links to Rfam database...	0.35	0.37	0.34	34	48728	76	9	57	10	59
ASE_00171	RNaseP_bact_a links to Rfam database...	0.57	0.60	0.55	56	48414	56	8	38	10	38
ASE_00172	RNaseP_bact_a links to Rfam database...	0.39	0.41	0.37	43	58880	80	9	64	7	63
ASE_00174	RNaseP_bact_a links to Rfam database...	0.48	0.50	0.47	55	60957	77	11	52	14	54
ASE_00175	RNaseP_bact_a links to Rfam database...	0.55	0.56	0.54	60	59919	62	10	42	10	47
ASE_00176	RNaseP_bact_a links to Rfam database...	0.41	0.43	0.41	47	59915	80	7	62	11	63
ASE_00179	RNaseP_bact_a links to Rfam database...	0.26	0.27	0.25	23	44162	79	13	55	11	61
ASE_00180	RNaseP_bact_a links to Rfam database...	0.43	0.43	0.43	43	51259	71	7	51	13	57
ASE_00181	RNaseP_bact_a links to Rfam database...	0.39	0.41	0.37	43	57514	78	9	64	5	63
ASE_00182	RNaseP_bact_a links to Rfam database...	0.43	0.43	0.44	58	84123	86	5	69	12	78
ASE_00183	RNaseP_bact_a links to Rfam database...	0.45	0.44	0.46	50	61316	71	8	51	12	63
ASE_00184	RNaseP_bact_a links to Rfam database...	0.44	0.46	0.42	47	54504	69	11	53	5	55
ASE_00185	RNaseP_bact_a links to Rfam database...	0.49	0.49	0.49	63	73407	73	10	56	7	65
ASE_00186	RNaseP_bact_a links to Rfam database...	0.43	0.42	0.44	55	78877	87	9	62	16	77
ASE_00187	RNaseP_arch links to Rfam database...	0.28	0.29	0.28	33	68517	96	13	72	11	82
ASE_00189	RNaseP_bact_b links to Rfam database...	0.34	0.35	0.34	36	63083	78	14	57	7	66
ASE_00190	RNaseP_bact_b links to Rfam database...	0.56	0.54	0.57	49	45365	50	1	36	13	41
ASE_00191	RNaseP_arch links to Rfam database...	0.57	0.59	0.55	36	29581	43	5	24	14	25
ASE_00192	RNaseP_bact_b links to Rfam database...	0.51	0.51	0.51	68	84533	73	9	56	8	65
ASE_00194	RNaseP_bact_b links to Rfam database...	0.41	0.41	0.42	49	73419	79	4	64	11	70
ASE_00195	-	0.41	0.42	0.39	56	86177	97	17	70	10	77
ASE_00196	RNaseP_arch links to Rfam database...	0.57	0.59	0.55	44	31546	50	4	32	14	31
ASE_00197	RNaseP_bact_a links to Rfam database...	0.31	0.32	0.31	46	89104	114	10	93	11	99
ASE_00198	RNaseP_bact_a links to Rfam database...	0.28	0.27	0.28	28	52551	76	7	64	5	74
ASE_00203	RNaseP_bact_a links to Rfam database...	0.54	0.55	0.52	53	46564	58	10	38	10	43
ASE_00204	RNaseP_bact_b links to Rfam database...	0.51	0.53	0.49	59	67775	70	12	50	8	53
ASE_00205	RNaseP_arch links to Rfam database...	0.17	0.19	0.16	17	45949	90	17	73	0	73
ASE_00209	RNaseP_arch links to Rfam database...	0.30	0.30	0.31	26	42988	63	8	49	6	62
ASE_00210	RNaseP_arch links to Rfam database...	0.62	0.63	0.61	41	27194	39	9	17	13	24
ASE_00212	RNaseP_bact_a links to Rfam database...	0.29	0.29	0.28	43	93810	117	10	98	9	105
ASE_00213	RNaseP_arch links to Rfam database...	0.68	0.65	0.70	43	27200	31	6	12	13	23
ASE_00214	RNaseP_bact_a links to Rfam database...	0.44	0.46	0.43	47	56171	76	2	60	14	56
ASE_00215	RNaseP_bact_a links to Rfam database...	0.28	0.28	0.29	28	48418	83	6	64	13	71
ASE_00216	RNaseP_bact_a links to Rfam database...	0.25	0.26	0.25	21	39255	67	8	56	3	61
ASE_00217	RNaseP_bact_a links to Rfam database...	0.34	0.33	0.35	30	40385	63	5	50	8	60
ASE_00221	RNaseP_bact_a links to Rfam database...	0.36	0.37	0.35	43	64496	87	11	70	6	74
ASE_00222	RNaseP_arch links to Rfam database...	0.30	0.32	0.29	50	111929	125	20	102	3	107
ASE_00227	RNaseP_bact_a links to Rfam database...	0.21	0.20	0.21	27	78875	107	6	95	6	106
ASE_00228	RNaseP_bact_a links to Rfam database...	0.36	0.40	0.32	34	46866	76	20	51	5	52
ASE_00229	RNaseP_bact_a links to Rfam database...	0.09	0.10	0.09	9	42384	101	6	87	8	78
ASE_00231	RNaseP_bact_a links to Rfam database...	0.56	0.58	0.53	56	47790	61	8	41	12	40
ASE_00232	RNaseP_bact_a links to Rfam database...	0.37	0.39	0.36	33	38411	70	4	55	11	51
ASE_00234	RNaseP_bact_a links to Rfam database...	0.54	0.54	0.55	70	75338	70	8	50	12	59
ASE_00237	RNaseP_nuc links to Rfam database...	0.00	0.00	0.00	0	45662	110	30	61	19	56
ASE_00238	RNaseP_bact_a links to Rfam database...	0.56	0.57	0.56	65	64144	64	10	42	12	49
ASE_00240	RNaseP_bact_a links to Rfam database...	0.31	0.31	0.32	29	46573	73	9	54	10	64
ASE_00241	RNaseP_bact_a links to Rfam database...	0.62	0.64	0.59	56	43861	48	6	33	9	31
ASE_00242	RNaseP_bact_a links to Rfam database...	0.42	0.41	0.44	46	60970	62	14	45	3	66
ASE_00245	RNaseP_nuc links to Rfam database...	0.38	0.37	0.38	29	55202	82	1	46	35	49
ASE_00246	RNaseP_nuc links to Rfam database...	0.07	0.07	0.06	5	48121	94	25	54	15	62
ASE_00247	RNaseP_nuc links to Rfam database...	0.10	0.13	0.08	8	54188	105	25	64	16	56
ASE_00248	RNaseP_bact_a links to Rfam database...	0.32	0.31	0.33	35	62376	75	7	63	5	79
ASE_00250	RNaseP_bact_a links to Rfam database...	0.37	0.36	0.38	47	78880	83	10	66	7	84
ASE_00252	RNaseP_bact_a links to Rfam database...	0.30	0.30	0.31	50	115281	120	9	100	11	118
ASE_00254	RNaseP_bact_a links to Rfam database...	0.36	0.39	0.34	32	36761	69	10	53	6	50
ASE_00255	RNaseP_bact_a links to Rfam database...	0.46	0.47	0.45	61	74555	83	9	66	8	69
ASE_00257	RNaseP_bact_a links to Rfam database...	0.56	0.57	0.56	55	50941	56	9	35	12	42
ASE_00258	RNaseP_nuc links to Rfam database...	0.26	0.28	0.24	15	26733	56	10	38	8	39
ASE_00259	RNaseP_bact_a links to Rfam database...	0.35	0.35	0.36	42	73037	85	9	65	11	79
ASE_00263	RNaseP_bact_a links to Rfam database...	0.15	0.16	0.15	19	70373	111	9	99	3	101
ASE_00264	RNaseP_nuc links to Rfam database...	0.43	0.44	0.43	44	49038	69	6	53	10	56
ASE_00267	RNaseP_bact_a links to Rfam database...	0.36	0.35	0.37	31	45067	62	8	44	10	57
ASE_00270	RNaseP_bact_a links to Rfam database...	0.51	0.50	0.52	64	72268	71	4	54	13	64
ASE_00274	RNaseP_bact_a links to Rfam database...	0.30	0.29	0.30	30	55512	78	13	56	9	73
ASE_00277	RNaseP_bact_a links to Rfam database...	0.28	0.30	0.26	27	48103	84	14	61	9	64
ASE_00279	RNaseP_bact_a links to Rfam database...	0.29	0.29	0.29	29	53202	80	4	66	10	72
ASE_00280	RNaseP_bact_a links to Rfam database...	0.20	0.20	0.20	20	51905	85	5	73	7	78
ASE_00281	RNaseP_bact_a links to Rfam database...	0.33	0.34	0.32	30	44458	73	11	52	10	58
ASE_00282	RNaseP_bact_a links to Rfam database...	0.23	0.24	0.24	30	77688	105	10	87	8	97
ASE_00283	RNaseP_bact_a links to Rfam database...	0.46	0.48	0.45	51	61662	74	12	51	11	56
ASE_00284	RNaseP_bact_a links to Rfam database...	0.08	0.08	0.08	9	58197	111	9	96	6	99
ASE_00285	RNaseP_bact_a links to Rfam database...	0.27	0.28	0.27	34	68878	102	9	85	8	88
ASE_00286	RNaseP_bact_a links to Rfam database...	0.57	0.54	0.61	50	46583	42	6	26	10	42
ASE_00287	RNaseP_bact_a links to Rfam database...	0.30	0.30	0.30	31	54842	81	6	67	8	72
ASE_00288	RNaseP_bact_a links to Rfam database...	0.27	0.27	0.28	25	45967	68	12	52	4	68
ASE_00289	RNaseP_bact_a links to Rfam database...	0.67	0.66	0.68	104	100873	60	6	42	12	53
ASE_00291	-	0.39	0.40	0.38	38	48415	73	7	56	10	56
ASE_00292	RNaseP_bact_a links to Rfam database...	0.38	0.38	0.39	52	81676	93	8	74	11	86
ASE_00294	RNaseP_bact_a links to Rfam database...	0.38	0.37	0.38	63	114317	107	9	92	6	108
ASE_00295	RNaseP_bact_a links to Rfam database...	0.49	0.49	0.50	64	73792	73	10	54	9	67
ASE_00296	RNaseP_bact_a links to Rfam database...	0.31	0.30	0.32	44	91669	101	7	86	8	101
ASE_00297	RNaseP_bact_a links to Rfam database...	0.41	0.42	0.40	41	52873	73	4	57	12	57
ASE_00298	RNaseP_bact_a links to Rfam database...	0.29	0.29	0.30	33	67418	86	8	69	9	80
ASE_00299	RNaseP_bact_a links to Rfam database...	0.45	0.47	0.43	47	49346	69	6	56	7	53
ASE_00303	RNaseP_nuc links to Rfam database...	0.46	0.47	0.44	45	67794	83	8	49	26	50
ASE_00305	RNaseP_bact_b links to Rfam database...	0.15	0.18	0.14	15	54504	107	20	76	11	70
ASE_00313	RNaseP_nuc links to Rfam database...	0.11	0.11	0.11	10	62387	106	11	73	22	79
ASE_00316	RNaseP_nuc links to Rfam database...	0.30	0.34	0.27	33	107758	124	18	71	35	65
ASE_00318	RNaseP_bact_b links to Rfam database...	0.41	0.42	0.40	49	80077	79	13	61	5	69
ASE_00321	RNaseP_bact_b links to Rfam database...	0.27	0.28	0.26	25	54520	80	13	57	10	63
ASE_00322	-	0.37	0.42	0.32	20	29341	67	13	29	25	28
ASE_00327	RNaseP_nuc links to Rfam database...	0.44	0.48	0.40	43	57184	75	21	43	11	46
ASE_00328	RNaseP_bact_b links to Rfam database...	0.51	0.49	0.53	55	72667	61	5	44	12	57
ASE_00329	RNaseP_nuc links to Rfam database...	0.53	0.54	0.52	34	40689	58	6	26	26	29
ASE_00330	RNaseP_nuc links to Rfam database...	0.40	0.42	0.38	38	56181	78	12	49	17	52
ASE_00332	RNaseP_bact_a links to Rfam database...	0.23	0.23	0.24	32	81674	118	5	99	14	106
ASE_00335	RNaseP_bact_b links to Rfam database...	0.58	0.57	0.58	66	75353	65	5	42	18	50
ASE_00337	RNaseP_nuc links to Rfam database...	0.45	0.44	0.47	31	39274	59	1	34	24	40
ASE_00338	RNaseP_nuc links to Rfam database...	0.35	0.37	0.34	36	66323	87	14	57	16	62
ASE_00339	RNaseP_bact_a links to Rfam database...	0.51	0.52	0.50	62	80077	77	3	58	16	57
ASE_00340	RNaseP_bact_a links to Rfam database...	0.14	0.15	0.14	13	45963	87	8	72	7	72
ASE_00342	RNaseP_bact_a links to Rfam database...	0.50	0.50	0.50	58	62365	70	9	49	12	57
ASE_00343	RNaseP_bact_a links to Rfam database...	0.51	0.50	0.53	56	83331	75	2	47	26	57
ASE_00344	-	0.50	0.54	0.46	30	27196	50	12	23	15	26
ASE_00346	RNaseP_arch links to Rfam database...	0.26	0.26	0.27	25	48112	83	9	59	15	72
ASE_00350	-	0.81	0.77	0.85	40	29599	44	0	7	37	12
ASE_00353	RNaseP_bact_a links to Rfam database...	0.19	0.21	0.19	22	57852	106	9	87	10	85
ASE_00359	RNaseP_arch links to Rfam database...	0.16	0.18	0.15	14	42682	87	15	67	5	66
ASE_00360	RNaseP_arch links to Rfam database...	0.25	0.28	0.23	18	29326	62	10	49	3	47
ASE_00361	RNaseP_bact_a links to Rfam database...	0.36	0.37	0.35	47	75333	94	11	75	8	80
ASE_00362	RNaseP_bact_a links to Rfam database...	0.43	0.44	0.42	40	48110	66	10	45	11	51
ASE_00363	RNaseP_bact_a links to Rfam database...	0.29	0.31	0.27	29	51254	81	12	65	4	65
ASE_00364	RNaseP_bact_a links to Rfam database...	0.38	0.39	0.38	41	54177	77	9	58	10	64
ASE_00366	RNaseP_bact_a links to Rfam database...	0.19	0.20	0.17	20	58538	98	14	81	3	78
ASE_00367	RNaseP_bact_a links to Rfam database...	0.26	0.27	0.25	23	42978	79	8	62	9	63
ASE_00369	RNaseP_bact_a links to Rfam database...	0.34	0.36	0.33	38	55831	88	3	73	12	69
ASE_00370	RNaseP_bact_a links to Rfam database...	0.29	0.30	0.28	25	41816	75	7	57	11	59
ASE_00372	RNaseP_bact_a links to Rfam database...	0.21	0.22	0.21	22	51897	88	11	73	4	78
ASE_00374	RNaseP_bact_a links to Rfam database...	0.48	0.48	0.48	42	44763	54	2	43	9	46
ASE_00375	RNaseP_bact_a links to Rfam database...	0.34	0.32	0.37	35	60284	67	9	50	8	75
ASE_00376	RNaseP_bact_a links to Rfam database...	0.45	0.46	0.44	48	56843	71	4	58	9	57
ASE_00377	RNaseP_bact_a links to Rfam database...	0.65	0.65	0.64	70	57521	52	8	31	13	37
ASE_00379	RNaseP_bact_a links to Rfam database...	0.25	0.26	0.25	23	45964	77	10	59	8	66
ASE_00380	RNaseP_bact_a links to Rfam database...	0.28	0.28	0.29	28	54848	82	7	63	12	71
ASE_00382	RNaseP_bact_a links to Rfam database...	0.36	0.37	0.35	31	41816	69	12	46	11	53
ASE_00383	RNaseP_bact_a links to Rfam database...	0.44	0.43	0.45	45	54514	70	4	52	14	60
ASE_00384	RNaseP_bact_a links to Rfam database...	0.27	0.28	0.27	26	48418	84	10	62	12	66
ASE_00385	RNaseP_bact_a links to Rfam database...	0.52	0.52	0.53	42	41825	54	7	31	16	39
ASE_00386	RNaseP_bact_a links to Rfam database...	0.39	0.40	0.38	38	50303	74	6	56	12	58
ASE_00387	RNaseP_bact_a links to Rfam database...	0.47	0.47	0.47	49	55841	66	8	47	11	55
ASE_00388	RNaseP_bact_a links to Rfam database...	0.29	0.30	0.28	27	45657	84	7	62	15	62
ASE_00390	RNaseP_bact_a links to Rfam database...	0.38	0.40	0.36	34	42100	71	9	52	10	51
ASE_00393	RNaseP_bact_a links to Rfam database...	0.27	0.28	0.27	26	47798	77	6	65	6	67
ASE_00394	RNaseP_bact_a links to Rfam database...	0.29	0.29	0.30	27	46881	73	6	57	10	66
ASE_00395	RNaseP_bact_a links to Rfam database...	0.54	0.56	0.52	47	41526	54	12	31	11	37
ASE_00396	RNaseP_bact_a links to Rfam database...	0.28	0.30	0.27	25	41522	78	11	58	9	58
ASE_00397	RNaseP_bact_a links to Rfam database...	0.43	0.43	0.42	45	54509	75	7	54	14	60
ASE_00398	RNaseP_bact_a links to Rfam database...	0.35	0.36	0.35	37	55839	79	6	63	10	67
ASE_00400	RNaseP_bact_a links to Rfam database...	0.63	0.64	0.62	68	57860	54	9	33	12	38
ASE_00401	RNaseP_bact_a links to Rfam database...	0.39	0.40	0.38	51	76893	91	12	72	7	75
ASE_00402	RNaseP_bact_a links to Rfam database...	0.44	0.45	0.44	38	42400	59	7	41	11	47
ASE_00403	RNaseP_bact_a links to Rfam database...	0.24	0.23	0.24	25	55841	94	8	71	15	82
ASE_00404	RNaseP_bact_a links to Rfam database...	0.25	0.28	0.23	24	42967	83	16	64	3	61
ASE_00406	RNaseP_bact_a links to Rfam database...	0.33	0.32	0.34	30	48740	71	5	53	13	64
ASE_00408	-	0.32	0.32	0.32	23	32312	59	6	44	9	48
ASE_00409	-	0.29	0.33	0.27	27	40941	76	9	64	3	56
ASE_00411	RNaseP_bact_a links to Rfam database...	0.39	0.40	0.39	36	49362	70	10	47	13	53
ASE_00412	RNaseP_bact_a links to Rfam database...	0.25	0.25	0.25	26	58206	86	11	68	7	79
ASE_00413	RNaseP_bact_a links to Rfam database...	0.60	0.62	0.59	50	44466	49	10	25	14	31
ASE_00414	RNaseP_bact_a links to Rfam database...	0.34	0.34	0.34	32	46267	75	6	55	14	63
ASE_00415	RNaseP_bact_a links to Rfam database...	0.47	0.48	0.46	49	54839	67	5	53	9	54
ASE_00416	RNaseP_bact_a links to Rfam database...	0.32	0.32	0.32	41	77291	98	8	81	9	86
ASE_00417	RNaseP_arch links to Rfam database...	0.42	0.44	0.40	44	54506	75	9	56	10	56
ASE_00418	RNaseP_arch links to Rfam database...	0.17	0.19	0.16	14	38696	80	6	65	9	61
ASE_00419	RNaseP_bact_a links to Rfam database...	0.51	0.52	0.49	54	54836	66	9	47	10	49
ASE_00420	RNaseP_nuc links to Rfam database...	0.56	0.57	0.55	36	43300	55	9	20	26	27
ASE_00422	RNaseP_bact_a links to Rfam database...	0.24	0.24	0.24	23	46875	85	1	72	12	71
ASE_00423	RNaseP_bact_a links to Rfam database...	0.36	0.38	0.34	41	56833	84	9	70	5	68
ASE_00426	RNaseP_bact_a links to Rfam database...	0.31	0.33	0.29	36	60951	91	10	78	3	72
ASE_00427	RNaseP_nuc links to Rfam database...	0.08	0.11	0.06	5	40673	91	35	42	14	41
ASE_00428	RNaseP_bact_a links to Rfam database...	0.29	0.30	0.29	37	76507	103	11	81	11	88
ASE_00429	-	0.36	0.38	0.35	25	28131	54	12	35	7	41
ASE_00430	RNaseP_bact_a links to Rfam database...	0.52	0.53	0.52	51	46873	56	1	46	9	46
ASE_00431	RNaseP_bact_a links to Rfam database...	0.54	0.54	0.54	51	46266	57	7	36	14	44
ASE_00434	RNaseP_bact_b links to Rfam database...	0.63	0.64	0.63	70	68154	63	4	37	22	40
ASE_00437	RNaseP_bact_a links to Rfam database...	0.30	0.30	0.31	41	79268	98	3	89	6	94
ASE_00438	RNaseP_bact_a links to Rfam database...	0.32	0.34	0.30	39	65935	97	16	76	5	77
ASE_00441	RNaseP_bact_a links to Rfam database...	0.45	0.46	0.45	51	64147	73	3	60	10	61
ASE_00443	RNaseP_nuc links to Rfam database...	0.96	0.96	0.96	48	26746	38	0	2	36	2
ASE_00447	RNaseP_bact_a links to Rfam database...	0.61	0.59	0.62	69	60267	47	9	33	5	47
ASE_00448	RNaseP_bact_a links to Rfam database...	0.45	0.43	0.48	48	64161	65	8	44	13	64
ASE_00451	RNaseP_bact_a links to Rfam database...	0.48	0.49	0.47	61	70746	77	7	62	8	64
ASE_00452	-	0.28	0.33	0.23	13	20854	49	22	21	6	26
ASE_00453	-	0.69	0.75	0.63	39	34129	59	4	19	36	13
ASE_00454	RNaseP_nuc links to Rfam database...	0.15	0.17	0.14	11	43286	82	19	49	14	52
CRW_00004	-	0.48	0.52	0.44	68	154135	122	26	61	35	63
CRW_00005	-	0.60	0.64	0.56	84	137925	109	18	48	43	48
CRW_00007	-	0.27	0.30	0.24	40	144827	136	30	94	12	93
CRW_00009	-	0.27	0.28	0.26	39	137927	133	8	101	24	99
CRW_00010	-	0.53	0.56	0.51	70	102695	88	16	50	22	56
CRW_00011	-	0.48	0.50	0.46	69	118190	102	17	65	20	69
CRW_00012	-	0.18	0.19	0.17	27	146996	153	11	119	23	114
CRW_00013	Intron_gpI links to Rfam database...	0.03	0.03	0.03	4	103598	147	24	114	9	111
CRW_00014	-	0.19	0.21	0.18	26	103596	132	24	94	14	97
CRW_00016	Intron_gpI links to Rfam database...	0.24	0.23	0.24	28	77305	101	10	78	13	92
CRW_00017	-	0.27	0.31	0.24	28	92120	129	15	72	42	63
CRW_00018	-	0.25	0.29	0.22	35	182553	173	35	87	51	86
CRW_00019	-	0.39	0.41	0.38	56	127617	118	20	72	26	81
CRW_00423	-	0.18	0.19	0.18	35	242358	187	21	142	24	154
CRW_00429	-	0.07	0.07	0.07	17	306675	249	37	207	5	216
CRW_00601	-	0.11	0.15	0.08	10	186839	182	58	59	65	58
CRW_00602	-	0.00	0.00	0.00	0	223982	214	66	67	81	68
CRW_00603	-	0.12	0.15	0.10	10	192410	208	22	68	118	58
CRW_00605	-	0.41	0.43	0.40	30	183846	165	10	35	120	40
CRW_00608	-	0.67	0.67	0.66	53	35698	45	3	24	18	26
CRW_00610	Intron_gpI links to Rfam database...	0.52	0.52	0.52	42	36234	53	4	35	14	39
CRW_00611	-	0.41	0.43	0.40	32	31294	61	7	42	12	43
CRW_00612	-	0.44	0.47	0.42	44	270374	224	12	50	162	49
CRW_00613	Intron_gpI links to Rfam database...	0.60	0.62	0.59	48	34898	50	1	33	16	30
CRW_00614	Intron_gpI links to Rfam database...	0.09	0.12	0.07	7	121673	167	34	57	76	50
CRW_00618	Intron_gpI links to Rfam database...	0.01	0.02	0.01	1	56208	107	13	58	36	60
CRW_00619	Intron_gpI links to Rfam database...	0.27	0.32	0.24	23	164928	154	28	46	80	50
CRW_00620	Intron_gpI links to Rfam database...	0.31	0.33	0.28	21	150901	165	8	45	112	42
CRW_00621	Intron_gpI links to Rfam database...	0.26	0.30	0.23	21	153090	163	20	50	93	50
CRW_00623	Intron_gpI links to Rfam database...	0.11	0.13	0.10	11	129683	155	28	73	54	72
CRW_00626	-	0.23	0.27	0.21	28	100889	131	21	87	23	76
CRW_00629	-	0.21	0.21	0.20	26	91248	110	22	82	6	96
CRW_00632	-	0.43	0.44	0.43	56	82898	90	9	65	16	72
CRW_00633	Intron_gpI links to Rfam database...	0.29	0.29	0.30	31	63442	76	12	61	3	75
CRW_00634	Intron_gpI links to Rfam database...	0.19	0.22	0.17	21	64493	110	25	81	4	73
CRW_00635	-	0.10	0.10	0.10	14	109142	127	12	110	5	123
CRW_00636	-	0.32	0.34	0.31	48	114803	121	14	95	12	95
CRW_00637	-	0.23	0.24	0.22	38	133733	137	20	112	5	120
CRW_00639	-	0.16	0.18	0.15	25	126587	151	29	115	7	113
CRW_00641	-	0.53	0.55	0.51	42	39820	55	6	35	14	34
CRW_00642	-	0.51	0.55	0.47	36	47201	69	14	27	28	29
CRW_00643	-	0.22	0.26	0.19	32	123086	152	38	100	14	90
CRW_00645	-	0.28	0.31	0.26	21	35430	70	11	49	10	46
CRW_00646	-	0.21	0.23	0.19	15	34899	74	11	55	8	49
CRW_00648	-	0.33	0.34	0.32	50	137920	132	23	82	27	98
CRW_00649	-	0.26	0.27	0.25	33	204350	183	20	77	86	91
CRW_00650	-	0.40	0.41	0.38	58	112899	107	12	81	14	84
CRW_00651	-	0.53	0.57	0.49	69	99988	93	19	52	22	52
CRW_00652	-	0.29	0.32	0.27	41	132201	140	15	98	27	89
CRW_00653	-	0.47	0.48	0.46	64	94692	87	11	63	13	70
CRW_00654	-	0.48	0.49	0.47	61	78080	80	11	58	11	63
CRW_00655	-	0.21	0.22	0.20	27	89117	118	9	100	9	97
CRW_00656	-	0.43	0.44	0.42	57	90389	94	12	67	15	72
CRW_00657	-	0.14	0.15	0.13	20	105874	141	14	122	5	116
CRW_00658	-	0.22	0.24	0.20	24	74572	115	12	83	20	78
CRW_00659	-	0.31	0.34	0.28	21	32309	64	13	42	9	40
CRW_00660	-	0.24	0.25	0.23	15	22090	56	7	43	6	45
CRW_00661	-	0.00	0.00	0.00	0	24243	72	14	53	5	51
CRW_00662	-	0.38	0.38	0.38	25	28615	61	4	36	21	40
CRW_00663	-	0.09	0.10	0.09	6	26039	71	9	52	10	55
CRW_00664	-	0.05	0.06	0.05	5	53527	99	22	74	3	73
CRW_00665	-	0.05	0.06	0.04	3	23582	73	12	56	5	45
CRW_00666	-	0.15	0.16	0.15	20	96004	127	16	101	10	106
CRW_00668	-	0.20	0.23	0.18	34	163694	166	28	122	16	116
CRW_00669	-	0.20	0.22	0.18	26	97316	132	24	95	13	93
CRW_00670	Intron_gpI links to Rfam database...	0.35	0.35	0.35	42	70006	81	12	65	4	78
CRW_00671	Intron_gpI links to Rfam database...	0.13	0.13	0.13	15	62723	100	11	86	3	102
CRW_00672	Intron_gpI links to Rfam database...	0.06	0.06	0.06	7	72276	114	17	90	7	104
CRW_00673	-	0.33	0.38	0.29	40	99992	128	28	68	32	65
CRW_00674	Intron_gpI links to Rfam database...	0.28	0.28	0.28	35	83310	106	12	79	15	89
CRW_00676	Intron_gpI links to Rfam database...	0.16	0.17	0.16	19	93407	113	22	80	11	96
CRW_00677	-	0.41	0.44	0.38	46	71888	88	17	59	12	59
CRW_00679	-	0.15	0.17	0.13	18	76502	123	23	93	7	89
CRW_00681	-	0.14	0.17	0.12	19	112896	150	35	100	15	93
CRW_00685	-	0.30	0.31	0.28	33	156964	148	16	67	65	73
CRW_00686	-	0.53	0.55	0.51	69	95132	83	13	52	18	56
CRW_00687	-	0.58	0.62	0.55	41	28605	38	15	19	4	25
CRW_00688	-	0.43	0.44	0.42	25	21885	42	9	26	7	32
CRW_00689	-	0.11	0.12	0.10	9	33582	79	8	71	0	68
CRW_00690	-	0.32	0.33	0.32	23	33339	55	10	39	6	46
CRW_00691	-	0.20	0.22	0.19	15	27182	68	14	50	4	52
CRW_00692	Intron_gpI links to Rfam database...	0.18	0.19	0.18	17	68539	100	16	63	21	73
CRW_00693	-	0.66	0.68	0.64	83	89123	62	18	29	15	39
CRW_00694	-	0.58	0.60	0.57	73	85776	64	16	40	8	49
CRW_00699	-	0.21	0.22	0.20	28	91668	119	19	91	9	98
CRW_00700	-	0.27	0.27	0.26	40	180747	150	8	106	36	107
CRW_00703	-	0.00	0.00	0.00	0	40387	94	12	71	11	66
CRW_00714	-	0.29	0.32	0.26	34	186223	168	21	77	70	73
CRW_00715	-	0.40	0.40	0.39	42	69270	80	3	63	14	62
CRW_00716	-	0.11	0.15	0.09	13	193610	201	30	100	71	76
CRW_00717	-	0.22	0.24	0.20	36	153558	154	28	113	13	112
CRW_00718	-	0.26	0.26	0.26	49	189847	150	17	123	10	142
CRW_00719	-	0.23	0.25	0.21	23	230070	211	27	61	123	68
CRW_00720	-	0.16	0.20	0.13	18	208198	205	36	83	86	73
CRW_00721	-	0.26	0.31	0.22	21	58559	91	29	44	18	47
CRW_00727	-	0.28	0.36	0.22	42	303622	208	65	81	62	75
CRW_00728	-	0.15	0.17	0.13	20	272533	234	32	106	96	99
CRW_00729	-	0.34	0.40	0.30	48	191109	159	27	87	45	73
CRW_00731	-	0.18	0.22	0.15	27	297426	221	59	94	68	96
CRW_00733	-	0.41	0.49	0.34	53	216657	164	45	56	63	56
CRW_00736	-	0.19	0.22	0.16	29	241674	205	48	109	48	102
CRW_00737	-	0.20	0.25	0.15	29	295874	237	76	86	75	85
CRW_00738	-	0.30	0.36	0.25	50	287464	230	56	91	83	87
CRW_00739	-	0.09	0.10	0.07	14	284445	235	54	122	59	121
CRW_00741	-	0.24	0.29	0.20	39	250082	203	46	111	46	96
CRW_00756	-	0.15	0.16	0.14	27	194805	185	24	144	17	145
CRW_00764	-	0.05	0.06	0.05	11	252903	212	39	163	10	185
CRW_00775	-	0.07	0.07	0.06	15	314582	231	53	171	7	197
CRW_00815	-	0.43	0.45	0.41	71	159721	123	28	75	20	87
CRW_00816	-	0.21	0.23	0.19	30	143756	163	32	98	33	99
CRW_00820	-	0.32	0.32	0.32	46	136359	125	6	92	27	99
PDB_00072	-	0.34	0.36	0.33	76	148009	158	26	129	3	134
PDB_00078	-	0.31	0.30	0.33	34	49666	74	4	66	4	81
PDB_00079	-	0.39	0.41	0.36	58	121612	112	21	80	11	84
PDB_00278	-	0.30	0.29	0.30	21	24907	50	3	45	2	51
PDB_00398	-	0.53	0.56	0.50	58	71894	67	6	52	9	45
PDB_00403	-	0.45	0.46	0.45	70	124593	106	13	74	19	83
PDB_00423	-	0.54	0.51	0.57	38	26729	33	0	29	4	36
PDB_00528	-	0.20	0.19	0.21	20	45960	80	6	70	4	83
PDB_00555	-	0.47	0.47	0.48	41	25339	46	2	43	1	47
PDB_00601	-	0.32	0.34	0.31	27	36227	71	6	55	10	52
PDB_00701	-	0.14	0.15	0.14	16	45337	99	9	89	1	93
PDB_00739	-	0.58	0.58	0.57	39	25810	35	2	27	6	28
PDB_00747	-	0.47	0.46	0.49	37	24455	42	6	33	3	43
PDB_00827	Intron_gpI links to Rfam database...	0.58	0.58	0.57	47	26946	37	6	29	2	34
PDB_00917	-	0.35	0.34	0.36	32	35157	63	6	50	7	63
PDB_00919	RNaseP_bact_a links to Rfam database...	0.48	0.46	0.51	47	44161	51	5	40	6	56
PDB_00985	-	0.55	0.63	0.48	40	30545	59	16	27	16	24
PDB_01076	-	0.56	0.51	0.63	40	23372	32	0	24	8	39
PDB_01129	-	0.19	0.20	0.18	14	35432	70	19	46	5	57
PDB_01144	-	0.18	0.18	0.18	23	82903	118	6	96	16	104
PDB_01157	-	0.22	0.22	0.22	22	49985	82	11	68	3	76
PDB_01161	-	0.10	0.12	0.09	9	36757	91	27	63	1	66
PDB_01166	-	0.28	0.27	0.28	57	181905	149	13	131	5	155
PDB_01193	-	0.32	0.32	0.32	48	105881	115	4	97	14	103
RFA_00597	Telomerase-vert links to Rfam database...	0.41	0.44	0.39	48	97780	99	18	57	24	61
RFA_00598	Telomerase-vert links to Rfam database...	0.18	0.20	0.17	20	84546	111	30	70	11	81
RFA_00599	Telomerase-vert links to Rfam database...	0.31	0.34	0.28	38	101339	111	33	65	13	73
RFA_00600	Telomerase-vert links to Rfam database...	0.06	0.08	0.05	8	120145	162	45	97	20	92
RFA_00601	Telomerase-vert links to Rfam database...	0.37	0.42	0.33	48	99088	112	28	71	13	66
RFA_00602	Telomerase-vert links to Rfam database...	0.32	0.35	0.30	41	101337	128	16	81	31	75
RFA_00606	Telomerase-cil links to Rfam database...	0.39	0.41	0.36	16	21277	43	8	20	15	23
RFA_00616	-	0.47	0.49	0.45	19	22963	40	6	17	17	20
RFA_00618	-	0.00	0.00	0.00	0	22943	72	22	40	10	39
RFA_00619	-	0.15	0.18	0.13	7	22738	60	14	32	14	32
RFA_00620	Telomerase-cil links to Rfam database...	0.21	0.23	0.19	9	21898	49	10	28	11	30
RFA_00621	RNase_MRP links to Rfam database...	0.30	0.32	0.29	24	46276	83	13	47	23	52
RFA_00623	RNase_MRP links to Rfam database...	0.48	0.47	0.48	37	43879	60	5	35	20	41
RFA_00624	RNase_MRP links to Rfam database...	0.19	0.21	0.18	13	30062	67	18	42	7	48
RFA_00626	rne5 links to Rfam database...	0.08	0.09	0.08	8	56511	99	24	73	2	79
RFA_00627	rne5 links to Rfam database...	0.38	0.39	0.37	34	56862	73	13	44	16	53
RFA_00628	rne5 links to Rfam database...	0.58	0.57	0.59	49	57208	64	7	27	30	37
RFA_00630	rne5 links to Rfam database...	0.48	0.47	0.49	41	56869	66	9	34	23	46
RFA_00639	7SK links to Rfam database...	0.10	0.10	0.09	9	54519	94	13	74	7	78
RFA_00805	RNAIII links to Rfam database...	0.30	0.31	0.29	47	133225	121	13	101	7	103
RFA_00814	R2_retro_el links to Rfam database...	0.20	0.22	0.18	9	25149	62	12	30	20	32
RFA_00815	R2_retro_el links to Rfam database...	0.47	0.54	0.41	22	24477	47	14	18	15	19
RFA_00816	R2_retro_el links to Rfam database...	0.00	0.00	0.00	0	23162	66	17	41	8	41
RFA_00817	R2_retro_el links to Rfam database...	0.00	0.00	0.00	0	21892	57	12	41	4	41
RFA_00818	R2_retro_el links to Rfam database...	0.25	0.27	0.23	11	20253	51	12	25	14	30
RFA_00819	R2_retro_el links to Rfam database...	0.16	0.17	0.16	7	27921	70	6	32	32	34
RFA_00820	bicoid_3 links to Rfam database...	0.53	0.53	0.53	85	151364	102	9	67	26	75
RFA_00830	bicoid_3 links to Rfam database...	0.27	0.28	0.27	43	152469	144	14	102	28	111
SRP_00002	Metazoa_SRP links to Rfam database...	0.67	0.65	0.69	66	45054	38	6	24	8	36
SRP_00003	-	0.36	0.39	0.33	37	45944	81	11	64	6	59
SRP_00006	Metazoa_SRP links to Rfam database...	0.49	0.49	0.49	49	45654	54	4	46	4	52
SRP_00009	Plant_SRP links to Rfam database...	0.22	0.22	0.22	22	46567	78	10	66	2	80
SRP_00011	Plant_SRP links to Rfam database...	0.10	0.11	0.09	11	46242	107	10	97	0	93
SRP_00012	Plant_SRP links to Rfam database...	0.28	0.29	0.28	29	46258	80	9	64	7	72
SRP_00015	Plant_SRP links to Rfam database...	0.30	0.30	0.30	30	46259	73	8	63	2	69
SRP_00016	Archaea_SRP links to Rfam database...	0.79	0.81	0.78	88	47782	44	1	24	19	21
SRP_00018	Fungi_SRP links to Rfam database...	0.43	0.44	0.41	36	38415	63	11	41	11	45
SRP_00019	Fungi_SRP links to Rfam database...	0.36	0.35	0.38	32	35961	59	3	50	6	59
SRP_00023	-	0.00	0.00	0.00	0	20854	61	18	38	5	35
SRP_00024	Bacteria_large_SRP links to Rfam database...	0.51	0.49	0.53	43	37594	49	7	31	11	44
SRP_00026	Bacteria_large_SRP links to Rfam database...	0.68	0.68	0.69	60	36769	45	0	27	18	28
SRP_00027	Bacteria_large_SRP links to Rfam database...	0.52	0.51	0.54	44	37046	48	4	34	10	43
SRP_00030	Bacteria_large_SRP links to Rfam database...	0.30	0.31	0.29	27	36764	69	5	60	4	61
SRP_00031	Bacteria_large_SRP links to Rfam database...	0.64	0.61	0.67	54	36234	37	3	24	10	35
SRP_00037	Bacteria_large_SRP links to Rfam database...	0.17	0.17	0.17	15	36496	80	4	70	6	72
SRP_00050	Metazoa_SRP links to Rfam database...	0.85	0.84	0.86	83	44753	34	0	14	20	16
SRP_00053	Metazoa_SRP links to Rfam database...	0.02	0.02	0.02	2	45053	96	14	81	1	92
SRP_00060	Metazoa_SRP links to Rfam database...	0.60	0.59	0.60	59	44453	50	1	38	11	41
SRP_00061	Metazoa_SRP links to Rfam database...	0.39	0.41	0.38	41	44742	75	10	57	8	59
SRP_00066	Metazoa_SRP links to Rfam database...	0.14	0.14	0.14	14	45349	89	12	76	1	86
SRP_00069	Fungi_SRP links to Rfam database...	0.29	0.28	0.29	24	34371	62	6	52	4	61
SRP_00070	Fungi_SRP links to Rfam database...	0.20	0.24	0.17	29	126588	151	37	102	12	92
SRP_00073	Fungi_SRP links to Rfam database...	0.43	0.48	0.39	34	38973	64	14	39	11	37
SRP_00076	-	0.19	0.26	0.14	10	25354	78	17	44	17	29
SRP_00079	Plant_SRP links to Rfam database...	0.53	0.55	0.51	48	41811	63	9	37	17	40
SRP_00085	Plant_SRP links to Rfam database...	0.44	0.45	0.45	45	45350	59	10	46	3	56
SRP_00086	Metazoa_SRP links to Rfam database...	0.62	0.62	0.61	62	44152	51	4	35	12	38
SRP_00087	Fungi_SRP links to Rfam database...	0.27	0.34	0.22	20	37309	84	30	42	12	38
SRP_00088	Bacteria_large_SRP links to Rfam database...	0.38	0.38	0.38	34	34102	62	5	50	7	55
SRP_00089	Bacteria_large_SRP links to Rfam database...	0.66	0.67	0.66	60	35687	39	4	27	8	30
SRP_00090	Bacteria_large_SRP links to Rfam database...	0.41	0.39	0.44	35	35432	51	6	38	7	55
SRP_00091	Fungi_SRP links to Rfam database...	0.57	0.61	0.53	58	52865	65	10	42	13	37
SRP_00099	Plant_SRP links to Rfam database...	0.55	0.57	0.53	54	44749	60	9	38	13	41
SRP_00102	Metazoa_SRP links to Rfam database...	0.44	0.44	0.45	44	44454	60	4	49	7	57
SRP_00103	Metazoa_SRP links to Rfam database...	0.67	0.68	0.66	69	45346	44	3	33	8	33
SRP_00104	Fungi_SRP links to Rfam database...	0.16	0.17	0.15	12	34372	73	14	55	4	57
SRP_00108	-	0.23	0.26	0.21	18	38417	78	13	55	10	52
SRP_00117	Metazoa_SRP links to Rfam database...	0.65	0.63	0.67	64	45356	40	2	29	9	38
SRP_00118	-	0.75	0.75	0.76	71	39246	38	0	23	15	24
SRP_00120	-	0.42	0.41	0.44	35	37321	56	6	39	11	51
SRP_00123	Metazoa_SRP links to Rfam database...	0.29	0.29	0.30	26	36499	63	7	53	3	65
SRP_00124	Metazoa_SRP links to Rfam database...	0.54	0.56	0.53	48	37037	55	8	35	12	37
SRP_00125	-	0.38	0.38	0.38	41	50294	75	5	63	7	66
SRP_00127	Fungi_SRP links to Rfam database...	0.40	0.42	0.39	50	72261	83	14	65	4	69
SRP_00130	Archaea_SRP links to Rfam database...	0.21	0.22	0.20	21	49666	85	6	77	2	76
SRP_00136	Fungi_SRP links to Rfam database...	0.27	0.31	0.24	22	44161	76	15	55	6	49
SRP_00142	Archaea_SRP links to Rfam database...	0.21	0.23	0.20	21	45949	92	12	74	6	72
SRP_00143	Archaea_SRP links to Rfam database...	0.42	0.44	0.40	44	49660	75	6	60	9	57
SRP_00144	Archaea_SRP links to Rfam database...	0.36	0.38	0.34	36	46560	80	8	61	11	58
SRP_00148	Fungi_SRP links to Rfam database...	0.28	0.30	0.26	26	49985	93	7	68	18	61
SRP_00152	Plant_SRP links to Rfam database...	0.31	0.31	0.32	32	45653	73	9	59	5	71
SRP_00153	Plant_SRP links to Rfam database...	0.24	0.24	0.24	26	46862	85	6	77	2	81
SRP_00157	Fungi_SRP links to Rfam database...	0.24	0.26	0.23	19	44169	77	16	49	12	53
SRP_00158	Fungi_SRP links to Rfam database...	0.00	0.00	0.00	0	124087	164	45	119	0	115
SRP_00160	Fungi_SRP links to Rfam database...	0.25	0.25	0.24	33	86184	106	14	89	3	97
SRP_00167	-	0.16	0.18	0.15	15	38682	89	18	66	5	69
SRP_00168	-	0.24	0.25	0.24	23	38684	77	9	65	3	68
SRP_00171	Metazoa_SRP links to Rfam database...	0.17	0.19	0.16	17	45343	91	13	78	0	71
SRP_00172	-	0.09	0.10	0.09	9	38964	88	11	76	1	82
SRP_00173	Bacteria_large_SRP links to Rfam database...	0.27	0.26	0.28	23	38144	69	0	59	10	67
SRP_00174	Bacteria_large_SRP links to Rfam database...	0.26	0.27	0.26	23	38694	70	12	52	6	63
SRP_00175	Fungi_SRP links to Rfam database...	0.18	0.19	0.17	16	44457	86	10	68	8	68
SRP_00178	Plant_SRP links to Rfam database...	0.17	0.17	0.18	17	45657	84	9	70	5	85
SRP_00179	Plant_SRP links to Rfam database...	0.03	0.03	0.03	3	45955	98	7	91	0	102
SRP_00180	-	0.45	0.46	0.44	25	22521	41	7	25	9	29
SRP_00181	Plant_SRP links to Rfam database...	0.09	0.09	0.10	9	45963	84	12	72	0	93
SRP_00182	Plant_SRP links to Rfam database...	0.34	0.35	0.34	35	45952	72	13	56	3	66
SRP_00184	Plant_SRP links to Rfam database...	0.24	0.24	0.25	24	45961	75	7	64	4	76
SRP_00188	Plant_SRP links to Rfam database...	0.26	0.27	0.25	21	31041	64	13	50	1	58
SRP_00197	Archaea_SRP links to Rfam database...	0.36	0.37	0.36	37	49353	73	6	59	8	64
SRP_00198	Archaea_SRP links to Rfam database...	0.13	0.14	0.13	14	50935	101	10	81	10	89
SRP_00199	Archaea_SRP links to Rfam database...	0.18	0.19	0.18	20	50930	94	7	83	4	85
SRP_00201	Archaea_SRP links to Rfam database...	0.78	0.79	0.77	88	47780	40	7	20	13	23
SRP_00202	Archaea_SRP links to Rfam database...	0.85	0.86	0.83	101	54163	31	5	16	10	16
SRP_00203	Archaea_SRP links to Rfam database...	0.72	0.75	0.69	79	48714	53	2	33	18	26
SRP_00204	Archaea_SRP links to Rfam database...	0.71	0.69	0.74	70	49046	45	1	24	20	32
SRP_00206	Archaea_SRP links to Rfam database...	0.74	0.75	0.73	81	47784	43	6	24	13	27
SRP_00208	Archaea_SRP links to Rfam database...	0.80	0.80	0.80	81	46564	36	3	17	16	20
SRP_00228	Metazoa_SRP links to Rfam database...	0.61	0.61	0.62	58	45357	51	9	27	15	37
SRP_00230	Fungi_SRP links to Rfam database...	0.44	0.43	0.45	39	39534	55	4	44	7	51
SRP_00234	Bacteria_large_SRP links to Rfam database...	0.71	0.71	0.71	61	36229	43	4	21	18	25
SRP_00239	Plant_SRP links to Rfam database...	0.22	0.23	0.21	21	50305	78	14	63	1	72
SRP_00240	Plant_SRP links to Rfam database...	0.57	0.60	0.55	61	48095	57	8	41	8	41
SRP_00241	Plant_SRP links to Rfam database...	0.55	0.60	0.51	49	45959	61	14	34	13	33
SRP_00246	-	0.06	0.07	0.05	5	40950	99	11	75	13	69
SRP_00247	Metazoa_SRP links to Rfam database...	0.00	0.00	0.00	0	47177	103	23	78	2	87
SRP_00252	Metazoa_SRP links to Rfam database...	0.32	0.35	0.30	31	49039	79	12	59	8	58
SRP_00253	Metazoa_SRP links to Rfam database...	0.22	0.24	0.20	22	49346	89	14	73	2	68
SRP_00254	Fungi_SRP links to Rfam database...	0.00	0.00	0.00	0	32310	75	18	57	0	61
SRP_00255	Archaea_SRP links to Rfam database...	0.56	0.59	0.54	55	47485	59	7	39	13	39
SRP_00257	Metazoa_SRP links to Rfam database...	0.68	0.69	0.67	75	50928	49	5	32	12	33
SRP_00260	Metazoa_SRP links to Rfam database...	0.58	0.60	0.57	60	47790	58	8	37	13	40
SRP_00261	-	0.40	0.39	0.42	41	45353	61	7	50	4	63
SRP_00262	-	0.52	0.53	0.50	54	48408	64	6	48	10	47
SRP_00263	-	0.72	0.74	0.71	77	48407	42	7	25	10	27
SRP_00265	Fungi_SRP links to Rfam database...	0.16	0.19	0.14	14	41225	94	20	69	5	59
SRP_00267	Metazoa_SRP links to Rfam database...	0.72	0.71	0.74	68	44459	45	4	20	21	28
SRP_00276	Archaea_SRP links to Rfam database...	0.80	0.80	0.80	88	50611	41	1	21	19	22
SRP_00278	Archaea_SRP links to Rfam database...	0.69	0.70	0.69	74	45948	45	2	32	11	31
SRP_00282	Metazoa_SRP links to Rfam database...	0.08	0.10	0.07	6	43273	95	22	64	9	57
SRP_00286	Fungi_SRP links to Rfam database...	0.37	0.36	0.37	63	136856	122	6	101	15	111
SRP_00287	Fungi_SRP links to Rfam database...	0.27	0.28	0.26	45	141605	143	25	103	15	117
SRP_00290	Fungi_SRP links to Rfam database...	0.31	0.32	0.31	43	100438	105	12	83	10	92
SRP_00292	Fungi_SRP links to Rfam database...	0.29	0.29	0.29	50	137375	136	4	121	11	123
SRP_00294	Fungi_SRP links to Rfam database...	0.31	0.31	0.31	52	129117	130	9	108	13	115
SRP_00299	Metazoa_SRP links to Rfam database...	0.06	0.06	0.06	6	44145	102	10	92	0	93
SRP_00300	Metazoa_SRP links to Rfam database...	0.00	0.00	0.00	0	44158	95	10	85	0	94
SRP_00301	Fungi_SRP links to Rfam database...	0.50	0.48	0.52	41	32561	49	2	36	11	45
SRP_00302	Fungi_SRP links to Rfam database...	0.22	0.23	0.22	19	41528	74	11	58	5	62
SRP_00308	Bacteria_large_SRP links to Rfam database...	0.27	0.26	0.27	23	36231	62	13	48	1	65
SRP_00317	Metazoa_SRP links to Rfam database...	0.14	0.14	0.14	14	45051	89	6	79	4	84
SRP_00321	Archaea_SRP links to Rfam database...	0.73	0.72	0.74	78	47480	39	4	24	11	30
SRP_00322	Archaea_SRP links to Rfam database...	0.73	0.72	0.73	79	48408	38	3	26	9	30
SRP_00323	Archaea_SRP links to Rfam database...	0.74	0.73	0.76	78	47175	33	1	24	8	29
SRP_00328	Metazoa_SRP links to Rfam database...	0.32	0.33	0.31	28	39530	68	12	51	5	57
SRP_00329	Metazoa_SRP links to Rfam database...	0.31	0.33	0.30	28	39810	75	5	60	10	57
SRP_00330	Archaea_SRP links to Rfam database...	0.64	0.69	0.60	66	49976	58	9	35	14	29
SRP_00331	Metazoa_SRP links to Rfam database...	0.61	0.61	0.61	53	37588	49	3	31	15	34
SRP_00332	Archaea_SRP links to Rfam database...	0.88	0.88	0.89	93	50298	34	1	11	22	13
SRP_00335	Bacteria_large_SRP links to Rfam database...	0.27	0.38	0.19	15	35166	94	30	34	30	24
SRP_00336	-	0.00	0.00	0.00	0	38971	91	11	78	2	77
SRP_00337	Bacteria_large_SRP links to Rfam database...	0.61	0.60	0.61	55	35421	48	3	32	13	36
SRP_00339	Archaea_SRP links to Rfam database...	0.68	0.69	0.67	65	44454	47	7	25	15	29
SRP_00340	Metazoa_SRP links to Rfam database...	0.34	0.37	0.33	30	41236	75	10	52	13	52
SRP_00345	-	0.27	0.29	0.25	15	20646	54	6	39	9	37
SRP_00347	Metazoa_SRP links to Rfam database...	0.64	0.66	0.62	63	46564	51	5	33	13	33
SRP_00348	-	0.08	0.08	0.09	8	46884	81	11	68	2	90
SRP_00353	-	0.00	0.00	0.00	0	37849	101	10	91	0	100
SRP_00354	-	0.33	0.34	0.33	32	38683	71	6	60	5	61
SRP_00355	-	0.37	0.39	0.37	37	41804	76	3	61	12	59
SRP_00361	Plant_SRP links to Rfam database...	0.32	0.32	0.32	29	41815	65	7	54	4	61
SRP_00368	Metazoa_SRP links to Rfam database...	0.52	0.52	0.52	51	43857	56	5	43	8	47
SRP_00371	Fungi_SRP links to Rfam database...	0.43	0.46	0.40	38	36221	63	11	45	7	44
SRP_00382	Fungi_SRP links to Rfam database...	0.31	0.31	0.32	53	141611	125	8	106	11	117
TMR_00007	tmRNA links to Rfam database...	0.35	0.36	0.34	39	61661	88	8	68	12	69
TMR_00008	tmRNA links to Rfam database...	0.36	0.38	0.34	40	65947	90	18	61	11	66
TMR_00010	tmRNA links to Rfam database...	0.21	0.23	0.19	22	57857	94	13	78	3	74
TMR_00012	tmRNA links to Rfam database...	0.32	0.37	0.28	30	64513	88	25	52	11	51
TMR_00014	tmRNA links to Rfam database...	0.55	0.56	0.54	62	68520	68	9	44	15	48
TMR_00017	tmRNA links to Rfam database...	0.27	0.26	0.27	27	67061	85	12	61	12	75
TMR_00018	tmRNA links to Rfam database...	0.34	0.37	0.32	34	64515	80	23	48	9	58
TMR_00028	tmRNA links to Rfam database...	0.33	0.36	0.31	35	62721	87	19	60	8	62
TMR_00030	tmRNA links to Rfam database...	0.20	0.20	0.20	22	75743	99	16	74	9	89
TMR_00034	tmRNA links to Rfam database...	0.58	0.60	0.56	66	59913	62	9	43	10	44
TMR_00035	tmRNA links to Rfam database...	0.13	0.15	0.12	15	67772	115	28	81	6	83
TMR_00036	tmRNA links to Rfam database...	0.19	0.20	0.18	20	90411	122	13	81	28	81
TMR_00038	tmRNA links to Rfam database...	0.48	0.51	0.46	56	71130	78	15	52	11	54
TMR_00042	tmRNA links to Rfam database...	0.24	0.24	0.24	24	62737	83	11	63	9	74
TMR_00046	tmRNA links to Rfam database...	0.38	0.42	0.35	40	62722	90	15	58	17	56
TMR_00047	tmRNA links to Rfam database...	0.17	0.21	0.15	12	48434	93	17	53	23	45
TMR_00048	tmRNA links to Rfam database...	0.51	0.55	0.47	52	64870	70	16	42	12	43
TMR_00049	tmRNA links to Rfam database...	0.21	0.22	0.20	19	63093	90	17	61	12	68
TMR_00051	tmRNA links to Rfam database...	0.22	0.24	0.21	23	65593	93	14	73	6	71
TMR_00055	tmRNA links to Rfam database...	0.18	0.18	0.18	21	78884	105	14	84	7	93
TMR_00057	tmRNA links to Rfam database...	0.12	0.14	0.10	11	73814	114	24	71	19	68
TMR_00061	tmRNA links to Rfam database...	0.11	0.12	0.11	12	59575	104	16	82	6	87
TMR_00062	tmRNA links to Rfam database...	0.19	0.20	0.19	21	78493	106	15	77	14	83
TMR_00064	tmRNA links to Rfam database...	0.08	0.09	0.07	9	76906	119	27	86	6	94
TMR_00065	tmRNA links to Rfam database...	0.18	0.20	0.16	21	76506	113	28	81	4	85
TMR_00067	tmRNA links to Rfam database...	0.32	0.34	0.30	39	82084	111	16	76	19	75
TMR_00073	tmRNA links to Rfam database...	0.30	0.29	0.30	34	65591	82	16	62	4	83
TMR_00076	tmRNA links to Rfam database...	0.32	0.34	0.31	34	70767	86	17	58	11	66
TMR_00080	tmRNA links to Rfam database...	0.19	0.22	0.17	21	70379	108	32	68	8	75
TMR_00081	tmRNA links to Rfam database...	0.39	0.42	0.37	45	67039	82	21	56	5	61
TMR_00082	tmRNA links to Rfam database...	0.30	0.33	0.28	32	67782	91	23	59	9	64
TMR_00083	tmRNA links to Rfam database...	0.65	0.68	0.62	71	68151	60	12	31	17	34
TMR_00092	tmRNA links to Rfam database...	0.51	0.56	0.47	57	67407	78	19	45	14	44
TMR_00093	tmRNA links to Rfam database...	0.32	0.35	0.30	36	64141	87	19	65	3	66
TMR_00096	tmRNA links to Rfam database...	0.30	0.31	0.28	31	64871	89	27	51	11	69
TMR_00101	tmRNA links to Rfam database...	0.10	0.10	0.09	11	64143	112	17	90	5	96
TMR_00102	tmRNA links to Rfam database...	0.17	0.19	0.16	19	64143	106	18	81	7	82
TMR_00103	tmRNA links to Rfam database...	0.54	0.56	0.51	61	64142	63	18	40	5	47
TMR_00104	-	0.06	0.07	0.05	5	66692	113	26	72	15	65
TMR_00106	tmRNA links to Rfam database...	0.30	0.33	0.27	39	89957	111	32	72	7	81
TMR_00109	tmRNA links to Rfam database...	0.43	0.44	0.43	54	88283	92	18	55	19	68
TMR_00111	tmRNA links to Rfam database...	0.58	0.60	0.56	73	90394	80	13	45	22	49
TMR_00116	tmRNA links to Rfam database...	0.47	0.49	0.46	51	64868	74	9	52	13	53
TMR_00117	tmRNA links to Rfam database...	0.58	0.58	0.58	69	80080	66	13	38	15	49
TMR_00118	tmRNA links to Rfam database...	0.24	0.25	0.24	30	81279	104	12	85	7	90
TMR_00119	tmRNA links to Rfam database...	0.15	0.16	0.14	17	71891	108	20	82	6	87
TMR_00123	tmRNA links to Rfam database...	0.21	0.23	0.21	23	66318	95	16	73	6	78
TMR_00124	tmRNA links to Rfam database...	0.49	0.54	0.45	53	70383	83	16	48	19	45
TMR_00125	tmRNA links to Rfam database...	0.19	0.19	0.18	19	64157	90	19	66	5	80
TMR_00127	tmRNA links to Rfam database...	0.22	0.23	0.21	22	62729	95	15	69	11	75
TMR_00128	tmRNA links to Rfam database...	0.23	0.26	0.21	25	60957	101	20	73	8	71
TMR_00131	tmRNA links to Rfam database...	0.23	0.24	0.22	24	64871	94	23	62	9	75
TMR_00135	tmRNA links to Rfam database...	0.19	0.21	0.18	21	62717	101	24	73	4	78
TMR_00136	tmRNA links to Rfam database...	0.11	0.12	0.10	12	74574	119	23	82	14	89
TMR_00137	tmRNA links to Rfam database...	0.30	0.34	0.27	30	60965	85	25	55	5	59
TMR_00139	tmRNA links to Rfam database...	0.22	0.24	0.20	22	62017	101	23	66	12	69
TMR_00140	tmRNA links to Rfam database...	0.12	0.14	0.11	14	73790	122	19	97	6	86
TMR_00142	tmRNA links to Rfam database...	0.30	0.33	0.28	34	70753	96	25	64	7	68
TMR_00143	tmRNA links to Rfam database...	0.38	0.40	0.36	41	64506	79	17	56	6	62
TMR_00144	tmRNA links to Rfam database...	0.24	0.25	0.22	26	74189	95	17	73	5	77
TMR_00146	tmRNA links to Rfam database...	0.49	0.50	0.49	21	32088	61	12	10	39	21
TMR_00148	tmRNA links to Rfam database...	0.70	0.88	0.56	15	27703	62	9	3	50	2
TMR_00150	tmRNA links to Rfam database...	0.54	0.62	0.46	26	43015	75	12	18	45	16
TMR_00152	tmRNA links to Rfam database...	0.25	0.26	0.24	30	81280	102	19	77	6	85
TMR_00155	tmRNA links to Rfam database...	0.37	0.38	0.36	39	61668	82	13	56	13	65
TMR_00156	tmRNA links to Rfam database...	0.11	0.12	0.10	12	60263	109	15	88	6	85
TMR_00158	tmRNA links to Rfam database...	0.35	0.39	0.32	39	60603	91	18	66	7	60
TMR_00159	tmRNA links to Rfam database...	0.39	0.41	0.37	38	62025	77	16	49	12	54
TMR_00160	tmRNA links to Rfam database...	0.20	0.20	0.19	19	64522	87	16	63	8	76
TMR_00164	tmRNA links to Rfam database...	0.19	0.20	0.19	21	66683	100	13	78	9	85
TMR_00165	tmRNA links to Rfam database...	0.30	0.32	0.29	31	61670	83	21	54	8	66
TMR_00166	tmRNA links to Rfam database...	0.28	0.29	0.27	29	61668	89	12	67	10	72
TMR_00168	tmRNA links to Rfam database...	0.66	0.66	0.66	75	60962	52	3	35	14	39
TMR_00173	tmRNA links to Rfam database...	0.16	0.19	0.14	8	42138	90	11	38	41	34
TMR_00179	tmRNA links to Rfam database...	0.32	0.35	0.31	34	67050	93	11	66	16	64
TMR_00180	tmRNA links to Rfam database...	0.54	0.56	0.52	55	67055	74	14	37	23	44
TMR_00182	tmRNA links to Rfam database...	0.05	0.06	0.05	6	66318	115	15	91	9	96
TMR_00183	tmRNA links to Rfam database...	0.17	0.17	0.16	18	63079	95	15	78	2	85
TMR_00184	tmRNA links to Rfam database...	0.25	0.26	0.24	27	63078	91	16	69	6	75
TMR_00193	tmRNA links to Rfam database...	0.30	0.33	0.28	26	59247	86	21	46	19	54
TMR_00194	tmRNA links to Rfam database...	0.39	0.41	0.37	38	62732	83	18	47	18	55
TMR_00196	tmRNA links to Rfam database...	0.28	0.30	0.27	29	60968	82	15	63	4	68
TMR_00199	tmRNA links to Rfam database...	0.28	0.30	0.26	28	62726	86	24	57	5	64
TMR_00200	-	0.29	0.31	0.28	23	41533	71	15	45	11	52
TMR_00204	tmRNA links to Rfam database...	0.35	0.37	0.34	36	60271	82	20	51	11	61
TMR_00207	tmRNA links to Rfam database...	0.26	0.27	0.25	28	72276	92	17	69	6	75
TMR_00223	tmRNA links to Rfam database...	0.15	0.17	0.13	16	64141	109	23	81	5	79
TMR_00224	tmRNA links to Rfam database...	0.15	0.17	0.14	17	64856	111	25	82	4	84
TMR_00226	tmRNA links to Rfam database...	0.53	0.55	0.52	58	69639	65	13	41	11	47
TMR_00227	tmRNA links to Rfam database...	0.27	0.30	0.25	30	70006	101	19	70	12	71
TMR_00228	tmRNA links to Rfam database...	0.20	0.22	0.18	24	88279	112	33	74	5	84
TMR_00234	tmRNA links to Rfam database...	0.33	0.34	0.32	35	58886	86	13	62	11	67
TMR_00238	tmRNA links to Rfam database...	0.14	0.15	0.13	15	84549	114	27	75	12	86
TMR_00239	tmRNA links to Rfam database...	0.41	0.43	0.40	41	61673	76	12	50	14	55
TMR_00240	tmRNA links to Rfam database...	0.32	0.38	0.27	32	63073	92	29	56	7	53
TMR_00246	-	0.12	0.15	0.10	5	78161	127	10	34	83	29
TMR_00248	tmRNA links to Rfam database...	0.37	0.42	0.32	16	54235	99	9	25	65	22
TMR_00257	tmRNA links to Rfam database...	0.26	0.29	0.24	28	67045	100	17	71	12	70
TMR_00259	tmRNA links to Rfam database...	0.23	0.24	0.22	25	67781	96	13	77	6	78
TMR_00261	tmRNA links to Rfam database...	0.23	0.25	0.21	25	66677	96	20	73	3	76
TMR_00262	tmRNA links to Rfam database...	0.32	0.36	0.30	37	74181	94	21	66	7	67
TMR_00271	tmRNA links to Rfam database...	0.19	0.21	0.18	19	64156	98	18	68	12	72
TMR_00274	tmRNA links to Rfam database...	0.33	0.35	0.31	37	66677	89	16	65	8	68
TMR_00278	tmRNA links to Rfam database...	0.18	0.20	0.17	20	67781	101	21	74	6	82
TMR_00279	tmRNA links to Rfam database...	0.37	0.39	0.35	37	68899	90	17	53	20	57
TMR_00280	tmRNA links to Rfam database...	0.15	0.16	0.14	16	65949	113	18	83	12	85
TMR_00283	tmRNA links to Rfam database...	0.07	0.07	0.07	7	65237	104	21	76	7	89
TMR_00289	tmRNA links to Rfam database...	0.24	0.24	0.24	24	67060	86	18	59	9	74
TMR_00290	tmRNA links to Rfam database...	0.36	0.38	0.35	35	64160	89	18	48	23	57
TMR_00296	tmRNA links to Rfam database...	0.30	0.32	0.30	31	68901	86	21	53	12	67
TMR_00298	tmRNA links to Rfam database...	0.22	0.25	0.20	25	68138	104	19	83	2	76
TMR_00300	tmRNA links to Rfam database...	0.38	0.38	0.39	43	70389	82	7	61	14	69
TMR_00301	tmRNA links to Rfam database...	0.26	0.30	0.23	29	82089	103	31	66	6	67
TMR_00302	tmRNA links to Rfam database...	0.23	0.27	0.21	25	77300	107	31	65	11	69
TMR_00305	tmRNA links to Rfam database...	0.17	0.19	0.16	19	60955	105	18	83	4	83
TMR_00306	tmRNA links to Rfam database...	0.21	0.22	0.21	23	64150	96	13	75	8	83
TMR_00310	tmRNA links to Rfam database...	0.32	0.34	0.31	33	63798	87	15	57	15	65
TMR_00317	tmRNA links to Rfam database...	0.38	0.39	0.37	40	68158	78	15	52	11	62
TMR_00331	tmRNA links to Rfam database...	0.20	0.22	0.18	18	66694	105	22	61	22	64
TMR_00332	tmRNA links to Rfam database...	0.27	0.29	0.25	29	67043	96	21	68	7	70
TMR_00334	tmRNA links to Rfam database...	0.55	0.56	0.54	57	66689	72	12	37	23	44
TMR_00337	tmRNA links to Rfam database...	0.39	0.39	0.40	46	82912	83	21	49	13	73
TMR_00340	tmRNA links to Rfam database...	0.37	0.38	0.35	31	64173	84	9	48	27	50
TMR_00341	tmRNA links to Rfam database...	0.33	0.36	0.30	33	63080	93	17	60	16	59
TMR_00343	tmRNA links to Rfam database...	0.36	0.39	0.33	41	64857	88	11	71	6	64
TMR_00345	tmRNA links to Rfam database...	0.44	0.46	0.41	48	63787	79	7	61	11	56
TMR_00346	tmRNA links to Rfam database...	0.24	0.26	0.22	24	64153	92	22	62	8	70
TMR_00348	tmRNA links to Rfam database...	0.16	0.17	0.16	17	77314	110	21	69	20	82
TMR_00352	tmRNA links to Rfam database...	0.08	0.09	0.06	7	95157	141	27	75	39	68
TMR_00353	tmRNA links to Rfam database...	0.32	0.35	0.30	37	84130	113	15	73	25	68
TMR_00357	tmRNA links to Rfam database...	0.29	0.33	0.26	30	82913	101	26	59	16	62
TMR_00358	tmRNA links to Rfam database...	0.40	0.41	0.39	41	74974	93	16	47	30	58
TMR_00361	-	0.25	0.32	0.20	23	93412	113	37	56	20	49
TMR_00366	tmRNA links to Rfam database...	0.25	0.27	0.23	27	67778	97	19	72	6	73
TMR_00372	tmRNA links to Rfam database...	0.34	0.39	0.31	37	70380	100	22	61	17	59
TMR_00374	tmRNA links to Rfam database...	0.11	0.12	0.10	11	81695	122	17	87	18	81
TMR_00375	tmRNA links to Rfam database...	0.29	0.31	0.28	30	73427	104	19	60	25	68
TMR_00376	tmRNA links to Rfam database...	0.29	0.33	0.27	31	74575	101	23	62	16	64
TMR_00378	tmRNA links to Rfam database...	0.17	0.20	0.15	19	67773	107	29	75	3	78
TMR_00383	tmRNA links to Rfam database...	0.21	0.22	0.21	22	66688	94	20	65	9	78
TMR_00384	tmRNA links to Rfam database...	0.43	0.45	0.41	49	65584	75	17	53	5	59
TMR_00393	tmRNA links to Rfam database...	0.23	0.26	0.21	14	53234	98	12	41	45	39
TMR_00395	tmRNA links to Rfam database...	0.34	0.36	0.33	39	64500	82	19	62	1	70
TMR_00398	tmRNA links to Rfam database...	0.28	0.29	0.28	31	65230	85	13	67	5	75
TMR_00399	tmRNA links to Rfam database...	0.30	0.32	0.29	30	64876	86	18	56	12	64
TMR_00404	tmRNA links to Rfam database...	0.20	0.22	0.18	20	67416	98	13	79	6	72
TMR_00408	tmRNA links to Rfam database...	0.55	0.60	0.50	53	65960	72	20	33	19	35
TMR_00409	tmRNA links to Rfam database...	0.63	0.70	0.57	32	68579	86	9	15	62	14
TMR_00411	tmRNA links to Rfam database...	0.37	0.40	0.33	35	60970	85	25	45	15	52
TMR_00415	tmRNA links to Rfam database...	0.23	0.25	0.22	25	67049	90	26	61	3	76
TMR_00419	tmRNA links to Rfam database...	0.35	0.35	0.36	39	81701	93	10	60	23	72
TMR_00422	tmRNA links to Rfam database...	0.50	0.54	0.47	50	67789	76	20	37	19	42
TMR_00423	tmRNA links to Rfam database...	0.30	0.36	0.26	26	63802	94	29	46	19	47
TMR_00427	tmRNA links to Rfam database...	0.15	0.15	0.14	15	67420	98	21	72	5	82
TMR_00429	tmRNA links to Rfam database...	0.42	0.44	0.40	48	74572	81	17	54	10	61
TMR_00430	tmRNA links to Rfam database...	0.13	0.15	0.12	16	82490	120	29	86	5	93
TMR_00431	tmRNA links to Rfam database...	0.32	0.36	0.28	20	51931	82	12	40	30	35
TMR_00432	tmRNA links to Rfam database...	0.25	0.28	0.23	29	79676	103	18	77	8	75
TMR_00433	tmRNA links to Rfam database...	0.40	0.44	0.36	47	80070	93	25	58	10	59
TMR_00439	tmRNA links to Rfam database...	0.29	0.33	0.27	33	68512	106	27	63	16	68
TMR_00441	tmRNA links to Rfam database...	0.22	0.23	0.21	19	62036	92	24	49	19	64
TMR_00443	tmRNA links to Rfam database...	0.23	0.25	0.22	26	67043	107	10	82	15	78
TMR_00448	tmRNA links to Rfam database...	0.21	0.22	0.20	20	62028	93	9	71	13	72
TMR_00451	tmRNA links to Rfam database...	0.15	0.17	0.13	15	63432	103	35	64	4	74
TMR_00457	tmRNA links to Rfam database...	0.30	0.33	0.28	34	78483	99	24	65	10	68
TMR_00458	tmRNA links to Rfam database...	0.32	0.33	0.30	31	63443	80	16	56	8	62
TMR_00460	tmRNA links to Rfam database...	0.40	0.43	0.37	46	79278	86	23	54	9	60
TMR_00465	tmRNA links to Rfam database...	0.15	0.16	0.15	15	64159	98	19	68	11	79
TMR_00469	tmRNA links to Rfam database...	0.17	0.19	0.16	19	64500	111	14	87	10	81
TMR_00472	tmRNA links to Rfam database...	0.26	0.27	0.25	26	64516	87	16	62	9	71
TMR_00478	tmRNA links to Rfam database...	0.21	0.22	0.20	22	71899	95	23	66	6	77
TMR_00498	tmRNA links to Rfam database...	0.38	0.42	0.35	42	68886	89	22	56	11	57
TMR_00499	tmRNA links to Rfam database...	0.22	0.24	0.21	24	64504	99	13	79	7	75
TMR_00501	tmRNA links to Rfam database...	0.10	0.11	0.09	10	62366	110	27	78	5	82
TMR_00502	tmRNA links to Rfam database...	0.36	0.40	0.32	37	75352	92	19	58	15	56
TMR_00503	tmRNA links to Rfam database...	0.44	0.48	0.40	53	67765	81	27	51	3	58
TMR_00519	tmRNA links to Rfam database...	0.14	0.15	0.13	14	63085	101	22	69	10	81
TMR_00520	tmRNA links to Rfam database...	0.17	0.18	0.16	18	63075	102	28	69	5	81
TMR_00522	tmRNA links to Rfam database...	0.27	0.30	0.24	29	63068	94	31	62	1	68
TMR_00528	tmRNA links to Rfam database...	0.23	0.25	0.22	24	63081	92	28	57	7	73
TMR_00540	tmRNA links to Rfam database...	0.26	0.28	0.24	29	73417	98	15	75	8	75
TMR_00541	tmRNA links to Rfam database...	0.23	0.24	0.22	25	61660	101	15	76	10	80
TMR_00544	tmRNA links to Rfam database...	0.35	0.37	0.34	40	89557	97	22	57	18	68
TMR_00547	tmRNA links to Rfam database...	0.46	0.46	0.46	46	65240	72	12	43	17	54
TMR_00553	tmRNA links to Rfam database...	0.27	0.28	0.25	23	48114	76	20	48	8	58
TMR_00559	tmRNA links to Rfam database...	0.32	0.34	0.30	34	62369	85	19	59	7	67
TMR_00560	tmRNA links to Rfam database...	0.19	0.19	0.19	19	60974	95	4	78	13	79
TMR_00562	tmRNA links to Rfam database...	0.21	0.23	0.19	23	72653	102	23	72	7	79
TMR_00563	tmRNA links to Rfam database...	0.31	0.35	0.28	36	75336	98	16	78	4	67
TMR_00566	tmRNA links to Rfam database...	0.29	0.30	0.28	30	60617	91	11	68	12	70
TMR_00568	tmRNA links to Rfam database...	0.39	0.39	0.39	39	60625	76	15	47	14	60
TMR_00570	tmRNA links to Rfam database...	0.38	0.38	0.39	37	60283	73	15	43	15	60
TMR_00571	tmRNA links to Rfam database...	0.50	0.51	0.50	50	60625	71	7	44	20	49
TMR_00576	tmRNA links to Rfam database...	0.43	0.44	0.42	45	60272	74	11	50	13	57
TMR_00579	tmRNA links to Rfam database...	0.23	0.28	0.19	25	80471	116	35	70	11	65
TMR_00580	tmRNA links to Rfam database...	0.43	0.45	0.41	45	60615	82	7	59	16	55
TMR_00581	tmRNA links to Rfam database...	0.20	0.21	0.19	21	62373	96	15	72	9	77
TMR_00584	tmRNA links to Rfam database...	0.27	0.28	0.26	27	60972	91	13	63	15	70
TMR_00586	tmRNA links to Rfam database...	0.47	0.49	0.44	48	60967	74	19	41	14	49
TMR_00587	tmRNA links to Rfam database...	0.36	0.37	0.36	37	61321	84	7	60	17	63
TMR_00588	tmRNA links to Rfam database...	0.34	0.36	0.33	36	77312	79	22	51	6	65
TMR_00594	tmRNA links to Rfam database...	0.21	0.22	0.21	23	79292	94	17	69	8	81
TMR_00596	tmRNA links to Rfam database...	0.16	0.18	0.15	17	78093	107	23	77	7	78
TMR_00599	tmRNA links to Rfam database...	0.24	0.31	0.19	22	63077	98	31	60	7	50
TMR_00600	tmRNA links to Rfam database...	0.21	0.22	0.20	25	79675	103	27	73	3	90
TMR_00601	tmRNA links to Rfam database...	0.32	0.36	0.28	15	58943	88	14	24	50	27
TMR_00603	tmRNA links to Rfam database...	0.43	0.49	0.38	21	60322	91	11	24	56	22
TMR_00604	tmRNA links to Rfam database...	0.48	0.50	0.47	56	62716	75	12	51	12	56
TMR_00605	tmRNA links to Rfam database...	0.35	0.36	0.35	39	74193	86	12	61	13	69
TMR_00606	tmRNA links to Rfam database...	0.54	0.55	0.52	59	68893	69	17	37	15	48
TMR_00609	tmRNA links to Rfam database...	0.56	0.55	0.56	62	63436	64	4	44	16	51
TMR_00610	tmRNA links to Rfam database...	0.64	0.65	0.64	68	62021	54	8	31	15	36
TMR_00611	tmRNA links to Rfam database...	0.46	0.49	0.43	50	61309	69	22	44	3	52
TMR_00612	tmRNA links to Rfam database...	0.32	0.34	0.30	35	60610	88	10	71	7	69
TMR_00614	tmRNA links to Rfam database...	0.31	0.32	0.30	33	60965	83	13	64	6	71
TMR_00615	tmRNA links to Rfam database...	0.56	0.60	0.53	58	63793	63	17	35	11	38
TMR_00616	tmRNA links to Rfam database...	0.36	0.39	0.34	39	67045	86	14	63	9	60
TMR_00617	tmRNA links to Rfam database...	0.29	0.33	0.26	19	34644	67	14	39	14	39
TMR_00623	tmRNA links to Rfam database...	0.41	0.43	0.40	46	61309	72	11	59	2	62
TMR_00624	tmRNA links to Rfam database...	0.36	0.37	0.35	40	62368	87	6	67	14	68
TMR_00625	tmRNA links to Rfam database...	0.23	0.25	0.22	26	78883	110	20	74	16	80
TMR_00626	tmRNA links to Rfam database...	0.47	0.50	0.44	54	67773	78	17	52	9	55
TMR_00680	tmRNA links to Rfam database...	0.43	0.47	0.39	47	67776	86	20	53	13	52
TMR_00681	tmRNA links to Rfam database...	0.25	0.26	0.25	25	65964	89	7	70	12	72
TMR_00683	tmRNA links to Rfam database...	0.19	0.22	0.16	22	82894	129	30	82	17	78
TMR_00686	tmRNA links to Rfam database...	0.24	0.26	0.22	28	71123	108	18	84	6	80
TMR_00687	tmRNA links to Rfam database...	0.33	0.36	0.30	40	71499	100	18	74	8	71
TMR_00696	tmRNA links to Rfam database...	0.24	0.25	0.24	28	84961	109	13	76	20	86
TMR_00698	tmRNA links to Rfam database...	0.16	0.16	0.15	17	63080	94	15	78	1	87
TMR_00699	tmRNA links to Rfam database...	0.23	0.25	0.22	25	67048	94	15	73	6	77
TMR_00702	tmRNA links to Rfam database...	0.13	0.14	0.12	14	67047	107	9	91	7	86
TMR_00703	tmRNA links to Rfam database...	0.21	0.23	0.20	23	67411	99	22	72	5	76
TMR_00706	tmRNA links to Rfam database...	0.48	0.47	0.49	48	66332	66	10	40	16	55
TMR_00711	tmRNA links to Rfam database...	0.43	0.48	0.38	47	67773	87	27	49	11	51
TMR_00712	tmRNA links to Rfam database...	0.21	0.22	0.20	24	78486	108	23	73	12	85
TMR_00716	tmRNA links to Rfam database...	0.10	0.10	0.10	10	62733	101	13	79	9	90

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Matthews Correlation Coeffient, Sensitivity and Positive Predictive Value have been calculated based on the paper by Gardener & Giegerich, 2004.

Table of contents:

Overview

Performance plots

Performance of MaxExpect - scored higher in this pairwise comparison

1. Total counts & total scores for MaxExpect

2. Individual counts for MaxExpect [ download as .csv ]

Performance of RNAwolf - scored lower in this pairwise comparison

1. Total counts & total scores for RNAwolf

2. Individual counts for RNAwolf [ download as .csv ]