CompaRNA - on-line benchmarks of RNA structure prediction methods

Laboratory of Structural Bioinformatics @ Adam Mickiewicz University in Poznan

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Overview

Metric	Sfold		Afold
MCC	0.571	>	0.516
Average MCC ± 95% Confidence Intervals	0.570 ± 0.017	>	0.519 ± 0.017
Sensitivity	0.523	>	0.517
Positive Predictive Value	0.625	>	0.516
Total TP	27590	>	27269
Total TN	36560668	>	36551929
Total FP	20722	<	30956
Total FP CONTRA	2805	<	4375
Total FP INCONS	13736	<	21226
Total FP COMP	4181	<	5355
Total FN	25174	<	25495
P-value	3.56938820447e-08

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Performance plots

Comparison of performance of Sfold and Afold. Positive Predictive Value (PPV) is plotted against sensitivity. Each dot represents a single test of each method. See tables below for raw data (individual counts for Sfold and Afold).
Average Matthews Correlation Coefficients (MCC) with 95% confidence intervals (CIs) were plotted for different RNA families, for which at least 3 members were present in the benchmarking dataset. 'n' denotes the number of MCCs used to calculate the average and CI. See tables below for raw data (individual counts for Sfold and Afold).
Comparison of average Matthews Correlation Coefficients (MCCs) for Sfold and Afold. The whiskers correspond to 95% confidence intervals (CIs). 'n' denotes the number of MCCs used to calculate average MCCs and CIs. See tables below for raw data (individual counts for Sfold and Afold).

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Performance of Sfold - scored higher in this pairwise comparison

1. Total counts & total scores for Sfold

Total Base Pair Counts
Total TP	27590
Total TN	36560668
Total FP	20722
Total FP CONTRA	2805
Total FP INCONS	13736
Total FP COMP	4181
Total FN	25174

Total Scores
MCC	0.571
Average MCC ± 95% Confidence Intervals	0.570 ± 0.017
Sensitivity	0.523
Positive Predictive Value	0.625
Nr of predictions	525

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2. Individual counts for Sfold [ download as .csv ]

RNA Chain	Rfam family	MCC	SENS	PPV	TP	TN	FP	FP CONTRA	FP INCONS	FP COMP	FN
ASE_00001	RNaseP_arch links to Rfam database...	0.64	0.61	0.67	46	34122	27	3	20	4	29
ASE_00002	RNaseP_arch links to Rfam database...	0.69	0.60	0.80	44	35456	16	2	9	5	29
ASE_00004	RNaseP_bact_a links to Rfam database...	0.74	0.66	0.83	64	47818	13	7	6	0	33
ASE_00005	RNaseP_bact_a links to Rfam database...	0.69	0.58	0.83	68	57888	18	0	14	4	49
ASE_00006	RNaseP_bact_a links to Rfam database...	0.73	0.62	0.85	58	47518	12	1	9	2	35
ASE_00007	RNaseP_bact_a links to Rfam database...	0.59	0.55	0.62	61	59587	42	1	36	5	49
ASE_00009	RNaseP_arch links to Rfam database...	0.78	0.75	0.82	50	26045	12	0	11	1	17
ASE_00012	RNaseP_bact_a links to Rfam database...	0.66	0.54	0.80	66	73838	21	2	14	5	57
ASE_00014	RNaseP_arch links to Rfam database...	0.25	0.25	0.26	26	54184	76	8	67	1	80
ASE_00016	-	0.62	0.62	0.62	38	66005	82	3	20	59	23
ASE_00017	RNaseP_nuc links to Rfam database...	0.27	0.25	0.29	16	50984	48	3	37	8	48
ASE_00020	RNaseP_bact_a links to Rfam database...	0.58	0.52	0.66	65	73822	33	6	27	0	61
ASE_00021	RNaseP_bact_a links to Rfam database...	0.66	0.51	0.86	82	104101	18	0	13	5	78
ASE_00023	RNaseP_bact_a links to Rfam database...	0.69	0.60	0.80	76	84160	23	4	15	4	51
ASE_00024	-	0.83	0.71	0.96	50	29351	14	0	2	12	20
ASE_00028	RNaseP_bact_b links to Rfam database...	0.61	0.55	0.67	69	84563	43	1	33	9	57
ASE_00029	RNaseP_bact_a links to Rfam database...	0.58	0.49	0.67	60	82939	30	3	26	1	62
ASE_00030	RNaseP_bact_a links to Rfam database...	0.66	0.57	0.75	83	85381	28	3	24	1	62
ASE_00032	RNaseP_bact_a links to Rfam database...	0.61	0.55	0.68	65	80104	34	3	28	3	53
ASE_00033	RNaseP_bact_a links to Rfam database...	0.49	0.40	0.60	48	64900	34	2	30	2	73
ASE_00036	RNaseP_bact_a links to Rfam database...	0.55	0.46	0.66	61	75762	35	5	27	3	71
ASE_00037	RNaseP_bact_a links to Rfam database...	0.55	0.49	0.61	54	59252	34	0	34	0	56
ASE_00038	RNaseP_bact_a links to Rfam database...	0.54	0.53	0.55	54	53529	47	4	41	2	47
ASE_00040	RNaseP_bact_a links to Rfam database...	0.63	0.51	0.78	68	78916	23	1	18	4	65
ASE_00041	RNaseP_bact_a links to Rfam database...	0.56	0.52	0.62	56	57539	37	2	33	2	52
ASE_00042	RNaseP_bact_a links to Rfam database...	0.58	0.52	0.64	75	89983	43	3	39	1	70
ASE_00044	RNaseP_bact_a links to Rfam database...	0.73	0.70	0.78	73	54521	26	3	18	5	32
ASE_00045	RNaseP_bact_b links to Rfam database...	0.62	0.59	0.65	47	47206	33	7	18	8	33
ASE_00046	RNaseP_bact_a links to Rfam database...	0.65	0.54	0.79	56	50332	16	1	14	1	47
ASE_00047	RNaseP_bact_a links to Rfam database...	0.40	0.38	0.43	49	74191	66	5	60	1	81
ASE_00053	RNaseP_bact_a links to Rfam database...	0.55	0.48	0.64	64	79301	39	2	34	3	69
ASE_00056	-	0.42	0.35	0.50	25	30826	27	2	23	2	47
ASE_00064	RNaseP_bact_a links to Rfam database...	0.52	0.44	0.61	39	45387	31	1	24	6	50
ASE_00066	RNaseP_bact_a links to Rfam database...	0.72	0.61	0.85	79	72297	14	1	13	0	51
ASE_00068	RNaseP_bact_a links to Rfam database...	0.48	0.39	0.59	33	37619	24	2	21	1	52
ASE_00074	RNaseP_bact_a links to Rfam database...	0.60	0.57	0.64	68	67790	38	3	35	0	51
ASE_00075	RNaseP_bact_a links to Rfam database...	0.73	0.64	0.84	103	108689	23	2	17	4	59
ASE_00076	RNaseP_bact_a links to Rfam database...	0.65	0.57	0.74	67	68175	26	2	21	3	51
ASE_00077	RNaseP_bact_a links to Rfam database...	0.57	0.49	0.66	42	45086	22	6	16	0	44
ASE_00078	RNaseP_bact_a links to Rfam database...	0.65	0.59	0.71	49	43002	21	1	19	1	34
ASE_00079	RNaseP_bact_a links to Rfam database...	0.59	0.49	0.72	49	55543	19	2	17	0	51
ASE_00080	RNaseP_bact_a links to Rfam database...	0.49	0.46	0.52	57	71521	56	5	48	3	66
ASE_00081	RNaseP_bact_a links to Rfam database...	0.60	0.53	0.69	51	49696	24	0	23	1	46
ASE_00082	RNaseP_bact_a links to Rfam database...	0.73	0.61	0.87	71	70418	23	0	11	12	45
ASE_00083	RNaseP_bact_a links to Rfam database...	0.81	0.75	0.87	83	62386	17	0	12	5	27
ASE_00084	RNaseP_bact_a links to Rfam database...	0.75	0.69	0.81	68	53544	19	3	13	3	31
ASE_00087	RNaseP_bact_a links to Rfam database...	0.69	0.60	0.80	86	88303	22	3	18	1	58
ASE_00089	-	0.45	0.37	0.55	29	31322	26	0	24	2	50
ASE_00090	RNaseP_bact_a links to Rfam database...	0.66	0.58	0.74	59	55531	22	1	20	1	42
ASE_00092	RNaseP_bact_a links to Rfam database...	0.80	0.73	0.89	82	63454	12	3	7	2	31
ASE_00096	RNaseP_bact_a links to Rfam database...	0.58	0.57	0.59	65	63436	47	3	42	2	50
ASE_00104	RNaseP_bact_a links to Rfam database...	0.65	0.56	0.75	67	64172	24	2	20	2	52
ASE_00111	RNaseP_nuc links to Rfam database...	0.31	0.32	0.31	18	50028	45	15	25	5	39
ASE_00112	RNaseP_bact_a links to Rfam database...	0.79	0.73	0.85	85	75366	22	5	10	7	31
ASE_00114	RNaseP_bact_b links to Rfam database...	0.38	0.32	0.45	25	45395	36	6	25	5	52
ASE_00115	RNaseP_bact_a links to Rfam database...	0.65	0.52	0.80	53	54549	19	0	13	6	48
ASE_00116	RNaseP_arch links to Rfam database...	0.22	0.17	0.31	11	31590	28	0	25	3	55
ASE_00118	RNaseP_bact_a links to Rfam database...	0.52	0.46	0.59	47	60647	34	3	29	2	55
ASE_00119	RNaseP_bact_a links to Rfam database...	0.87	0.82	0.92	89	62738	9	1	7	1	19
ASE_00120	RNaseP_arch links to Rfam database...	0.61	0.53	0.69	50	46899	22	4	18	0	44
ASE_00121	RNaseP_arch links to Rfam database...	0.37	0.25	0.55	23	45108	19	2	17	0	69
ASE_00122	RNaseP_bact_a links to Rfam database...	0.35	0.28	0.42	25	43306	34	0	34	0	63
ASE_00123	RNaseP_bact_a links to Rfam database...	0.34	0.28	0.41	24	38444	39	3	32	4	61
ASE_00125	RNaseP_bact_a links to Rfam database...	0.71	0.58	0.88	51	39282	7	0	7	0	37
ASE_00126	RNaseP_bact_a links to Rfam database...	0.83	0.79	0.88	65	40396	13	1	8	4	17
ASE_00128	RNaseP_bact_a links to Rfam database...	0.73	0.65	0.81	65	53221	21	1	14	6	35
ASE_00129	RNaseP_bact_a links to Rfam database...	0.51	0.47	0.56	52	62742	44	2	39	3	59
ASE_00131	RNaseP_bact_a links to Rfam database...	0.66	0.51	0.86	43	39290	16	0	7	9	42
ASE_00132	RNaseP_bact_a links to Rfam database...	0.66	0.63	0.70	60	50317	28	4	22	2	35
ASE_00134	RNaseP_bact_a links to Rfam database...	0.36	0.33	0.40	31	50326	46	5	41	0	64
ASE_00135	RNaseP_bact_a links to Rfam database...	0.50	0.45	0.56	49	63103	42	0	38	4	60
ASE_00136	RNaseP_bact_a links to Rfam database...	0.70	0.61	0.81	56	48136	18	0	13	5	36
ASE_00137	RNaseP_bact_a links to Rfam database...	0.55	0.44	0.69	43	48454	22	1	18	3	55
ASE_00138	RNaseP_bact_a links to Rfam database...	0.53	0.52	0.54	42	40392	38	4	32	2	39
ASE_00139	RNaseP_bact_a links to Rfam database...	0.83	0.71	0.96	74	54208	6	0	3	3	30
ASE_00140	RNaseP_bact_a links to Rfam database...	0.71	0.57	0.90	71	70797	8	2	6	0	54
ASE_00144	-	0.41	0.38	0.44	37	58227	49	7	40	2	60
ASE_00145	RNaseP_arch links to Rfam database...	0.47	0.42	0.53	47	70036	48	4	38	6	64
ASE_00146	RNaseP_bact_a links to Rfam database...	0.47	0.36	0.62	45	70803	29	1	27	1	79
ASE_00148	RNaseP_arch links to Rfam database...	0.72	0.66	0.78	102	112445	30	1	27	2	52
ASE_00151	RNaseP_bact_a links to Rfam database...	0.33	0.28	0.40	27	51935	41	5	36	0	71
ASE_00153	RNaseP_nuc links to Rfam database...	0.69	0.67	0.70	49	57560	61	2	19	40	24
ASE_00154	RNaseP_arch links to Rfam database...	0.67	0.63	0.72	67	65248	29	2	24	3	40
ASE_00155	RNaseP_arch links to Rfam database...	0.64	0.51	0.80	73	93437	21	3	15	3	69
ASE_00159	-	0.65	0.59	0.72	36	34930	35	0	14	21	25
ASE_00160	-	0.86	0.84	0.88	42	23823	21	0	6	15	8
ASE_00161	RNaseP_bact_b links to Rfam database...	0.28	0.29	0.28	25	53540	63	14	49	0	62
ASE_00163	RNaseP_bact_a links to Rfam database...	0.49	0.44	0.55	41	53226	43	5	29	9	52
ASE_00165	RNaseP_bact_a links to Rfam database...	0.60	0.56	0.63	57	52885	34	9	24	1	44
ASE_00168	RNaseP_nuc links to Rfam database...	0.27	0.30	0.24	19	60648	76	18	41	17	45
ASE_00169	RNaseP_bact_a links to Rfam database...	0.65	0.53	0.80	57	57220	15	0	14	1	50
ASE_00170	RNaseP_bact_a links to Rfam database...	0.64	0.54	0.76	50	48762	19	2	14	3	43
ASE_00171	RNaseP_bact_a links to Rfam database...	0.61	0.60	0.62	56	48426	36	7	27	2	38
ASE_00172	RNaseP_bact_a links to Rfam database...	0.74	0.61	0.90	65	58924	7	2	5	0	41
ASE_00174	RNaseP_bact_a links to Rfam database...	0.47	0.44	0.49	48	60978	51	3	46	2	61
ASE_00175	RNaseP_bact_a links to Rfam database...	0.70	0.63	0.79	67	59946	22	3	15	4	40
ASE_00176	RNaseP_bact_a links to Rfam database...	0.62	0.55	0.70	61	59944	29	4	22	3	49
ASE_00179	RNaseP_bact_a links to Rfam database...	0.64	0.65	0.63	55	44166	33	7	25	1	29
ASE_00180	RNaseP_bact_a links to Rfam database...	0.71	0.68	0.75	68	51269	29	2	21	6	32
ASE_00181	RNaseP_bact_a links to Rfam database...	0.55	0.54	0.56	57	57528	51	3	42	6	49
ASE_00182	RNaseP_bact_a links to Rfam database...	0.53	0.49	0.57	67	84137	51	3	48	0	69
ASE_00183	RNaseP_bact_a links to Rfam database...	0.73	0.71	0.75	80	61319	30	0	26	4	33
ASE_00185	RNaseP_bact_a links to Rfam database...	0.77	0.70	0.86	89	73432	21	3	12	6	39
ASE_00186	RNaseP_bact_a links to Rfam database...	0.73	0.70	0.77	92	78884	33	3	24	6	40
ASE_00187	RNaseP_arch links to Rfam database...	0.47	0.43	0.53	49	68542	48	5	39	4	66
ASE_00190	RNaseP_bact_b links to Rfam database...	0.65	0.46	0.93	41	45407	5	0	3	2	49
ASE_00191	RNaseP_arch links to Rfam database...	0.74	0.64	0.85	39	29600	11	0	7	4	22
ASE_00192	RNaseP_bact_b links to Rfam database...	0.33	0.27	0.40	36	84575	61	6	49	6	97
ASE_00196	RNaseP_arch links to Rfam database...	0.79	0.77	0.81	58	31554	17	2	12	3	17
ASE_00197	RNaseP_bact_a links to Rfam database...	0.58	0.51	0.66	74	89141	44	1	37	6	71
ASE_00198	RNaseP_bact_a links to Rfam database...	0.63	0.62	0.64	63	52552	35	6	29	0	39
ASE_00203	RNaseP_bact_a links to Rfam database...	0.72	0.61	0.84	59	46595	11	4	7	0	37
ASE_00209	RNaseP_arch links to Rfam database...	0.41	0.38	0.46	33	42999	39	5	34	0	55
ASE_00210	RNaseP_arch links to Rfam database...	0.59	0.60	0.59	39	27195	27	6	21	0	26
ASE_00212	RNaseP_bact_a links to Rfam database...	0.73	0.68	0.79	100	93835	30	2	24	4	48
ASE_00213	RNaseP_arch links to Rfam database...	0.69	0.62	0.76	41	27207	13	1	12	0	25
ASE_00214	RNaseP_bact_a links to Rfam database...	0.79	0.77	0.82	79	56184	22	3	14	5	24
ASE_00215	RNaseP_bact_a links to Rfam database...	0.55	0.51	0.60	50	48432	37	4	30	3	49
ASE_00216	RNaseP_bact_a links to Rfam database...	0.70	0.65	0.76	53	39270	17	5	12	0	29
ASE_00217	RNaseP_bact_a links to Rfam database...	0.44	0.34	0.57	31	40416	26	1	22	3	59
ASE_00221	RNaseP_bact_a links to Rfam database...	0.57	0.44	0.73	52	64549	22	1	18	3	65
ASE_00222	RNaseP_arch links to Rfam database...	0.69	0.59	0.79	93	111984	24	3	21	0	64
ASE_00227	RNaseP_bact_a links to Rfam database...	0.33	0.30	0.35	40	78890	73	6	67	0	93
ASE_00228	RNaseP_bact_a links to Rfam database...	0.69	0.62	0.78	53	46903	15	11	4	0	33
ASE_00229	RNaseP_bact_a links to Rfam database...	0.63	0.60	0.66	52	42407	28	8	19	1	35
ASE_00231	RNaseP_bact_a links to Rfam database...	0.64	0.64	0.66	61	47802	33	5	27	1	35
ASE_00232	RNaseP_bact_a links to Rfam database...	0.65	0.61	0.69	51	38429	25	3	20	2	33
ASE_00234	RNaseP_bact_a links to Rfam database...	0.56	0.45	0.69	58	75382	30	1	25	4	71
ASE_00237	RNaseP_nuc links to Rfam database...	0.00	0.00	0.00	0	45703	67	18	32	17	56
ASE_00238	RNaseP_bact_a links to Rfam database...	0.49	0.47	0.51	54	64155	56	1	51	4	60
ASE_00240	RNaseP_bact_a links to Rfam database...	0.67	0.60	0.76	56	46591	23	0	18	5	37
ASE_00241	RNaseP_bact_a links to Rfam database...	0.66	0.49	0.88	43	43907	7	0	6	1	44
ASE_00245	RNaseP_nuc links to Rfam database...	0.91	0.87	0.94	68	55206	30	0	4	26	10
ASE_00246	RNaseP_nuc links to Rfam database...	0.20	0.12	0.33	8	48181	20	5	11	4	59
ASE_00247	RNaseP_nuc links to Rfam database...	0.32	0.28	0.36	18	54235	68	4	28	36	46
ASE_00252	RNaseP_bact_a links to Rfam database...	0.59	0.55	0.64	92	115296	57	4	48	5	76
ASE_00254	RNaseP_bact_a links to Rfam database...	0.80	0.66	0.98	54	36801	1	0	1	0	28
ASE_00255	RNaseP_bact_a links to Rfam database...	0.72	0.66	0.78	86	74581	25	3	21	1	44
ASE_00257	RNaseP_bact_a links to Rfam database...	0.71	0.56	0.90	54	50980	6	0	6	0	43
ASE_00258	RNaseP_nuc links to Rfam database...	0.79	0.70	0.88	38	26753	8	0	5	3	16
ASE_00263	RNaseP_bact_a links to Rfam database...	0.69	0.63	0.77	75	70403	23	5	17	1	45
ASE_00264	RNaseP_nuc links to Rfam database...	0.55	0.51	0.59	51	49054	41	1	35	5	49
ASE_00267	RNaseP_bact_a links to Rfam database...	0.54	0.35	0.84	31	45113	10	0	6	4	57
ASE_00270	RNaseP_bact_a links to Rfam database...	0.68	0.66	0.69	85	72267	40	6	32	2	43
ASE_00274	RNaseP_bact_a links to Rfam database...	0.51	0.48	0.54	49	55521	41	8	33	0	54
ASE_00277	RNaseP_bact_a links to Rfam database...	0.46	0.44	0.48	40	48121	44	8	36	0	51
ASE_00279	RNaseP_bact_a links to Rfam database...	0.71	0.53	0.95	54	53244	4	0	3	1	47
ASE_00280	RNaseP_bact_a links to Rfam database...	0.65	0.57	0.75	56	51928	20	2	17	1	42
ASE_00282	RNaseP_bact_a links to Rfam database...	0.55	0.47	0.64	60	77721	35	1	33	1	67
ASE_00283	RNaseP_bact_a links to Rfam database...	0.51	0.42	0.63	45	61704	30	3	24	3	62
ASE_00284	RNaseP_bact_a links to Rfam database...	0.64	0.61	0.67	66	58213	39	2	30	7	42
ASE_00285	RNaseP_bact_a links to Rfam database...	0.72	0.67	0.77	82	68900	32	0	24	8	40
ASE_00286	RNaseP_bact_a links to Rfam database...	0.44	0.42	0.46	39	46580	52	3	43	6	53
ASE_00287	RNaseP_bact_a links to Rfam database...	0.73	0.68	0.78	70	54856	26	2	18	6	33
ASE_00288	RNaseP_bact_a links to Rfam database...	0.33	0.29	0.38	27	45984	46	3	42	1	66
ASE_00289	RNaseP_bact_a links to Rfam database...	0.77	0.65	0.91	102	100913	14	2	8	4	55
ASE_00291	-	0.46	0.33	0.65	31	48468	19	1	16	2	63
ASE_00292	RNaseP_bact_a links to Rfam database...	0.68	0.61	0.76	84	81699	30	2	25	3	54
ASE_00294	RNaseP_bact_a links to Rfam database...	0.80	0.72	0.89	123	114343	17	2	13	2	48
ASE_00295	RNaseP_bact_a links to Rfam database...	0.56	0.50	0.63	65	73817	40	4	34	2	66
ASE_00296	RNaseP_bact_a links to Rfam database...	0.24	0.22	0.27	32	91686	89	8	80	1	113
ASE_00297	RNaseP_bact_a links to Rfam database...	0.61	0.50	0.75	49	52910	16	1	15	0	49
ASE_00298	RNaseP_bact_a links to Rfam database...	0.61	0.52	0.70	59	67444	27	4	21	2	54
ASE_00299	RNaseP_bact_a links to Rfam database...	0.55	0.50	0.61	50	49373	37	5	27	5	50
ASE_00303	RNaseP_nuc links to Rfam database...	0.61	0.64	0.58	61	67791	50	10	34	6	34
ASE_00305	RNaseP_bact_b links to Rfam database...	0.51	0.39	0.66	33	54565	22	1	16	5	52
ASE_00313	RNaseP_nuc links to Rfam database...	0.71	0.66	0.76	59	62403	36	4	15	17	30
ASE_00321	RNaseP_bact_b links to Rfam database...	0.62	0.39	1.00	34	54581	0	0	0	0	54
ASE_00322	-	0.77	0.81	0.74	39	29350	36	3	11	22	9
ASE_00328	RNaseP_bact_b links to Rfam database...	0.45	0.41	0.48	46	72676	54	3	46	5	66
ASE_00330	RNaseP_nuc links to Rfam database...	0.77	0.73	0.80	66	56198	33	0	16	17	24
ASE_00332	RNaseP_bact_a links to Rfam database...	0.53	0.51	0.55	70	81683	58	2	55	1	68
ASE_00337	RNaseP_nuc links to Rfam database...	0.61	0.54	0.69	38	39285	29	0	17	12	33
ASE_00338	RNaseP_nuc links to Rfam database...	0.64	0.59	0.69	58	66346	42	5	21	16	40
ASE_00340	RNaseP_bact_a links to Rfam database...	0.75	0.73	0.77	62	45975	25	6	13	6	23
ASE_00342	RNaseP_bact_a links to Rfam database...	0.66	0.57	0.78	65	62398	19	0	18	1	50
ASE_00343	RNaseP_bact_a links to Rfam database...	0.49	0.44	0.55	50	83345	56	5	36	15	63
ASE_00344	-	0.81	0.82	0.81	46	27204	26	4	7	15	10
ASE_00346	RNaseP_arch links to Rfam database...	0.36	0.33	0.40	32	48125	51	4	44	3	65
ASE_00350	-	0.93	0.88	0.98	46	29599	23	0	1	22	6
ASE_00359	RNaseP_arch links to Rfam database...	0.50	0.49	0.52	39	42703	43	3	33	7	41
ASE_00361	RNaseP_bact_a links to Rfam database...	0.50	0.47	0.53	60	75353	57	6	47	4	67
ASE_00362	RNaseP_bact_a links to Rfam database...	0.66	0.60	0.71	55	48128	25	3	19	3	36
ASE_00363	RNaseP_bact_a links to Rfam database...	0.57	0.54	0.60	51	51275	35	1	33	1	43
ASE_00364	RNaseP_bact_a links to Rfam database...	0.38	0.33	0.43	35	54204	47	4	42	1	70
ASE_00366	RNaseP_bact_a links to Rfam database...	0.58	0.59	0.57	58	58552	45	9	34	2	40
ASE_00367	RNaseP_bact_a links to Rfam database...	0.43	0.38	0.49	33	43004	34	4	30	0	53
ASE_00369	RNaseP_bact_a links to Rfam database...	0.75	0.68	0.82	73	55856	17	1	15	1	34
ASE_00370	RNaseP_bact_a links to Rfam database...	0.68	0.63	0.74	53	41833	20	1	18	1	31
ASE_00372	RNaseP_bact_a links to Rfam database...	0.73	0.69	0.77	69	51913	26	4	17	5	31
ASE_00374	RNaseP_bact_a links to Rfam database...	0.39	0.38	0.42	33	44771	46	10	36	0	55
ASE_00375	RNaseP_bact_a links to Rfam database...	0.71	0.54	0.95	59	60316	5	0	3	2	51
ASE_00376	RNaseP_bact_a links to Rfam database...	0.57	0.54	0.60	57	56858	43	3	35	5	48
ASE_00379	RNaseP_bact_a links to Rfam database...	0.67	0.55	0.82	49	45996	20	2	9	9	40
ASE_00380	RNaseP_bact_a links to Rfam database...	0.53	0.40	0.69	40	54888	23	0	18	5	59
ASE_00382	RNaseP_bact_a links to Rfam database...	0.58	0.54	0.63	45	41833	30	6	21	3	39
ASE_00383	RNaseP_bact_a links to Rfam database...	0.58	0.53	0.63	56	54526	35	5	28	2	49
ASE_00384	RNaseP_bact_a links to Rfam database...	0.64	0.43	0.93	40	48473	7	0	3	4	52
ASE_00385	RNaseP_bact_a links to Rfam database...	0.53	0.43	0.65	35	41851	21	0	19	2	46
ASE_00386	RNaseP_bact_a links to Rfam database...	0.57	0.53	0.61	51	50319	38	3	30	5	45
ASE_00387	RNaseP_bact_a links to Rfam database...	0.60	0.46	0.79	48	55884	17	1	12	4	56
ASE_00388	RNaseP_bact_a links to Rfam database...	0.72	0.67	0.78	60	45676	20	0	17	3	29
ASE_00390	RNaseP_bact_a links to Rfam database...	0.71	0.58	0.88	49	42139	15	2	5	8	36
ASE_00393	RNaseP_bact_a links to Rfam database...	0.50	0.41	0.60	38	47832	32	1	24	7	55
ASE_00394	RNaseP_bact_a links to Rfam database...	0.80	0.77	0.84	72	46885	17	2	12	3	21
ASE_00395	RNaseP_bact_a links to Rfam database...	0.81	0.70	0.94	59	41553	8	0	4	4	25
ASE_00396	RNaseP_bact_a links to Rfam database...	0.47	0.37	0.60	31	41564	25	1	20	4	52
ASE_00397	RNaseP_bact_a links to Rfam database...	0.46	0.41	0.52	43	54533	39	5	34	0	62
ASE_00398	RNaseP_bact_a links to Rfam database...	0.69	0.64	0.74	67	55855	25	1	22	2	37
ASE_00400	RNaseP_bact_a links to Rfam database...	0.74	0.67	0.82	71	57883	17	1	15	1	35
ASE_00401	RNaseP_bact_a links to Rfam database...	0.54	0.56	0.53	70	76897	61	10	51	0	56
ASE_00402	RNaseP_bact_a links to Rfam database...	0.64	0.45	0.90	38	42444	7	0	4	3	47
ASE_00403	RNaseP_bact_a links to Rfam database...	0.57	0.45	0.73	48	55879	18	1	17	0	59
ASE_00404	RNaseP_bact_a links to Rfam database...	0.62	0.54	0.71	46	43006	25	0	19	6	39
ASE_00408	-	0.65	0.56	0.75	40	32332	18	1	12	5	31
ASE_00411	RNaseP_bact_a links to Rfam database...	0.29	0.27	0.32	24	49379	53	6	46	1	65
ASE_00413	RNaseP_bact_a links to Rfam database...	0.43	0.42	0.44	34	44474	43	13	30	0	47
ASE_00415	RNaseP_bact_a links to Rfam database...	0.60	0.53	0.68	55	54865	28	4	22	2	48
ASE_00416	RNaseP_bact_a links to Rfam database...	0.70	0.67	0.73	85	77305	35	3	28	4	42
ASE_00417	RNaseP_arch links to Rfam database...	0.41	0.41	0.41	41	54516	61	7	51	3	59
ASE_00418	RNaseP_arch links to Rfam database...	0.34	0.27	0.44	20	38736	27	2	23	2	55
ASE_00419	RNaseP_bact_a links to Rfam database...	0.75	0.73	0.77	75	54849	26	4	18	4	28
ASE_00420	RNaseP_nuc links to Rfam database...	0.65	0.68	0.62	43	43296	53	2	24	27	20
ASE_00422	RNaseP_bact_a links to Rfam database...	0.69	0.63	0.77	59	46894	25	0	18	7	35
ASE_00426	RNaseP_bact_a links to Rfam database...	0.46	0.40	0.53	43	60994	38	2	36	0	65
ASE_00427	RNaseP_nuc links to Rfam database...	0.14	0.13	0.16	6	40718	39	8	23	8	40
ASE_00428	RNaseP_bact_a links to Rfam database...	0.61	0.40	0.94	50	76583	4	0	3	1	75
ASE_00429	-	0.66	0.56	0.79	37	28156	10	3	7	0	29
ASE_00430	RNaseP_bact_a links to Rfam database...	0.65	0.62	0.67	60	46882	35	5	24	6	37
ASE_00431	RNaseP_bact_a links to Rfam database...	0.55	0.49	0.60	47	46282	36	6	25	5	48
ASE_00434	RNaseP_bact_b links to Rfam database...	0.60	0.55	0.64	61	68170	42	5	29	8	49
ASE_00437	RNaseP_bact_a links to Rfam database...	0.40	0.39	0.42	52	79277	73	5	67	1	83
ASE_00438	RNaseP_bact_a links to Rfam database...	0.48	0.44	0.53	51	65970	45	0	45	0	65
ASE_00441	RNaseP_bact_a links to Rfam database...	0.78	0.74	0.81	83	64159	25	3	16	6	29
ASE_00447	RNaseP_bact_a links to Rfam database...	0.65	0.59	0.72	68	60283	32	1	26	5	48
ASE_00448	RNaseP_bact_a links to Rfam database...	0.23	0.22	0.24	25	64155	87	6	75	6	87
ASE_00451	RNaseP_bact_a links to Rfam database...	0.62	0.52	0.73	65	70787	24	2	22	0	60
ASE_00452	-	0.88	0.87	0.89	34	20872	25	0	4	21	5
ASE_00453	-	0.72	0.62	0.84	32	34153	35	0	6	29	20
ASE_00454	RNaseP_nuc links to Rfam database...	0.55	0.52	0.59	33	43309	49	1	22	26	30
CRW_00004	-	0.54	0.54	0.53	71	154157	95	11	51	33	60
CRW_00005	-	0.57	0.56	0.58	74	137948	76	9	44	23	58
CRW_00007	-	0.31	0.30	0.32	40	144867	89	23	61	5	93
CRW_00009	-	0.59	0.59	0.60	81	137939	77	9	46	22	57
CRW_00010	-	0.80	0.72	0.89	91	102729	24	3	8	13	35
CRW_00011	-	0.66	0.67	0.66	92	118201	60	7	41	12	46
CRW_00013	Intron_gpI links to Rfam database...	0.36	0.27	0.48	31	103675	57	8	26	23	84
CRW_00014	-	0.46	0.38	0.57	47	103657	46	6	30	10	76
CRW_00016	Intron_gpI links to Rfam database...	0.80	0.65	0.98	78	77341	14	0	2	12	42
CRW_00017	-	0.41	0.44	0.38	40	92131	75	14	50	11	51
CRW_00019	-	0.75	0.66	0.84	91	127657	40	0	17	23	46
CRW_00423	-	0.18	0.17	0.18	33	242376	157	20	127	10	156
CRW_00429	-	0.20	0.16	0.25	37	306790	112	18	91	3	196
CRW_00601	-	0.17	0.18	0.17	12	186895	117	20	39	58	56
CRW_00602	-	0.14	0.13	0.14	9	224050	89	21	35	33	59
CRW_00603	-	0.00	0.00	0.00	0	192487	54	16	7	31	68
CRW_00605	-	0.75	0.56	1.00	39	183882	91	0	0	91	31
CRW_00608	-	0.73	0.68	0.77	54	35708	23	1	15	7	25
CRW_00610	Intron_gpI links to Rfam database...	0.51	0.49	0.52	40	36238	37	9	28	0	41
CRW_00612	-	0.64	0.59	0.70	55	270401	157	0	24	133	38
CRW_00613	Intron_gpI links to Rfam database...	0.74	0.67	0.83	52	34917	19	0	11	8	26
CRW_00614	Intron_gpI links to Rfam database...	0.19	0.19	0.19	11	121713	102	12	35	55	46
CRW_00619	Intron_gpI links to Rfam database...	0.41	0.30	0.56	22	164986	76	2	15	59	51
CRW_00620	Intron_gpI links to Rfam database...	0.18	0.22	0.14	14	150874	138	30	57	51	49
CRW_00621	Intron_gpI links to Rfam database...	0.31	0.30	0.33	21	153118	131	6	36	89	50
CRW_00623	Intron_gpI links to Rfam database...	0.41	0.30	0.57	25	129751	78	2	17	59	58
CRW_00626	-	0.62	0.63	0.62	65	100920	54	16	24	14	39
CRW_00629	-	0.51	0.45	0.58	55	91283	43	10	30	3	67
CRW_00633	Intron_gpI links to Rfam database...	0.65	0.49	0.85	52	63485	11	2	7	2	54
CRW_00635	-	0.50	0.45	0.56	62	109168	58	6	42	10	75
CRW_00637	-	0.31	0.30	0.31	48	133750	110	18	87	5	110
CRW_00641	-	0.67	0.66	0.68	50	39829	32	5	19	8	26
CRW_00642	-	0.45	0.46	0.43	30	47209	47	9	30	8	35
CRW_00643	-	0.44	0.40	0.48	49	123153	58	18	36	4	73
CRW_00645	-	0.72	0.63	0.82	42	35460	17	3	6	8	25
CRW_00646	-	0.66	0.56	0.78	36	34934	13	3	7	3	28
CRW_00648	-	0.61	0.56	0.67	83	137952	40	10	30	0	65
CRW_00649	-	0.72	0.63	0.83	78	204386	85	1	15	69	46
CRW_00650	-	0.54	0.49	0.59	69	112934	51	3	44	4	73
CRW_00652	-	0.63	0.63	0.63	82	132224	67	8	41	18	48
CRW_00654	-	0.86	0.81	0.92	101	78100	12	1	8	3	23
CRW_00655	-	0.76	0.73	0.80	90	89141	27	4	18	5	34
CRW_00659	-	0.37	0.38	0.37	23	32322	44	15	25	4	38
CRW_00661	-	0.12	0.10	0.15	5	24277	30	11	17	2	46
CRW_00662	-	0.39	0.40	0.38	26	28612	49	7	35	7	39
CRW_00663	-	0.00	0.00	0.00	0	26078	28	3	25	0	61
CRW_00664	-	0.16	0.10	0.25	8	53596	24	5	19	0	70
CRW_00665	-	0.06	0.06	0.06	3	23606	45	14	30	1	45
CRW_00666	-	0.54	0.50	0.59	63	96034	56	7	37	12	63
CRW_00668	-	0.36	0.34	0.39	51	163747	89	13	67	9	99
CRW_00669	-	0.56	0.46	0.67	55	97379	38	4	23	11	64
CRW_00670	Intron_gpI links to Rfam database...	0.80	0.74	0.87	89	70023	15	6	7	2	31
CRW_00671	Intron_gpI links to Rfam database...	0.75	0.70	0.81	82	62734	23	5	14	4	35
CRW_00672	Intron_gpI links to Rfam database...	0.78	0.71	0.85	79	72297	20	6	8	6	32
CRW_00674	Intron_gpI links to Rfam database...	0.60	0.54	0.66	67	83335	36	6	28	2	57
CRW_00676	Intron_gpI links to Rfam database...	0.61	0.57	0.66	65	93430	48	9	24	15	50
CRW_00677	-	0.59	0.57	0.62	60	71913	42	8	29	5	45
CRW_00679	-	0.24	0.23	0.25	25	76537	78	13	61	4	82
CRW_00681	-	0.50	0.48	0.52	54	112946	59	13	37	9	58
CRW_00685	-	0.58	0.54	0.63	57	156989	62	9	25	28	49
CRW_00687	-	0.69	0.68	0.69	45	28615	24	7	13	4	21
CRW_00689	-	0.69	0.71	0.66	55	33587	30	11	17	2	22
CRW_00690	-	0.78	0.72	0.83	50	33351	15	2	8	5	19
CRW_00691	-	0.56	0.57	0.56	38	27193	31	4	26	1	29
CRW_00692	Intron_gpI links to Rfam database...	0.54	0.42	0.69	38	68580	27	6	11	10	52
CRW_00693	-	0.84	0.78	0.90	95	89148	25	1	9	15	27
CRW_00694	-	0.66	0.64	0.68	78	85790	41	5	32	4	44
CRW_00699	-	0.67	0.61	0.73	77	91701	30	1	27	2	49
CRW_00700	-	0.70	0.61	0.80	90	180788	44	0	23	21	57
CRW_00714	-	0.60	0.42	0.85	45	186302	41	0	8	33	62
CRW_00715	-	0.76	0.70	0.83	73	69290	18	3	12	3	31
CRW_00716	-	0.34	0.34	0.35	30	193667	127	10	46	71	59
CRW_00717	-	0.64	0.50	0.83	74	153646	17	3	12	2	74
CRW_00718	-	0.79	0.74	0.84	142	189867	45	2	25	18	49
CRW_00719	-	0.63	0.53	0.75	48	230117	115	5	11	99	43
CRW_00721	-	0.57	0.60	0.54	41	58577	45	14	21	10	27
CRW_00727	-	0.45	0.47	0.44	55	303684	122	31	40	51	62
CRW_00728	-	0.29	0.29	0.30	34	272578	135	22	57	56	85
CRW_00729	-	0.22	0.17	0.29	21	191199	62	14	37	11	100
CRW_00733	-	0.36	0.40	0.32	44	216673	135	31	63	41	65
CRW_00736	-	0.15	0.15	0.16	20	241731	122	32	77	13	111
CRW_00737	-	0.33	0.35	0.31	40	295936	120	41	48	31	74
CRW_00738	-	0.34	0.34	0.34	47	287523	124	33	58	33	90
CRW_00739	-	0.23	0.24	0.23	32	284498	154	24	81	49	103
CRW_00741	-	0.44	0.39	0.49	53	250169	76	22	34	20	82
CRW_00756	-	0.49	0.49	0.49	85	194827	99	13	75	11	87
CRW_00764	-	0.05	0.05	0.06	9	252970	140	26	111	3	187
CRW_00775	-	0.15	0.09	0.23	20	314733	69	30	38	1	192
CRW_00815	-	0.69	0.57	0.84	90	159788	22	2	15	5	68
CRW_00816	-	0.37	0.34	0.39	44	143804	87	9	59	19	85
CRW_00820	-	0.59	0.56	0.62	81	136373	54	14	35	5	64
PDB_00072	-	0.46	0.46	0.46	96	148033	111	6	105	0	114
PDB_00078	-	0.72	0.65	0.79	75	49675	20	6	14	0	40
PDB_00079	-	0.70	0.64	0.76	91	121652	57	8	20	29	51
PDB_00278	-	0.07	0.07	0.08	5	24910	61	4	57	0	67
PDB_00403	-	0.52	0.50	0.54	76	124609	73	14	51	8	77
PDB_00423	-	0.21	0.20	0.23	15	26731	50	6	44	0	59
PDB_00601	-	0.52	0.37	0.73	29	36275	11	0	11	0	50
PDB_00701	-	0.45	0.42	0.48	46	45356	50	5	44	1	63
PDB_00747	-	0.72	0.60	0.87	48	24476	7	0	7	0	32
PDB_00827	Intron_gpI links to Rfam database...	0.64	0.47	0.86	38	26984	8	0	6	2	43
PDB_00917	-	0.52	0.48	0.55	46	35162	43	3	34	6	49
PDB_00919	RNaseP_bact_a links to Rfam database...	0.55	0.48	0.64	49	44176	30	3	25	2	54
PDB_00985	-	0.23	0.27	0.21	17	30546	66	10	55	1	47
PDB_01129	-	0.27	0.28	0.26	20	35435	61	15	41	5	51
PDB_01144	-	0.28	0.19	0.41	24	82969	43	1	34	8	103
PDB_01157	-	0.19	0.09	0.39	9	50063	14	3	11	0	89
PDB_01166	-	0.41	0.36	0.46	77	181939	94	17	73	4	135
PDB_01193	-	0.44	0.42	0.46	63	105894	82	14	59	9	88
RFA_00597	Telomerase-vert links to Rfam database...	0.57	0.49	0.67	53	97824	46	4	22	20	56
RFA_00599	Telomerase-vert links to Rfam database...	0.69	0.68	0.70	75	101368	52	8	24	20	36
RFA_00601	Telomerase-vert links to Rfam database...	0.27	0.21	0.35	24	99167	52	9	35	8	90
RFA_00602	Telomerase-vert links to Rfam database...	0.54	0.53	0.55	62	101363	68	16	34	18	54
RFA_00606	Telomerase-cil links to Rfam database...	0.65	0.59	0.72	23	21289	19	7	2	10	16
RFA_00620	Telomerase-cil links to Rfam database...	0.55	0.49	0.63	19	21915	22	3	8	11	20
RFA_00621	RNase_MRP links to Rfam database...	0.41	0.38	0.45	29	46295	49	2	34	13	47
RFA_00623	RNase_MRP links to Rfam database...	0.47	0.44	0.50	34	43888	48	6	28	14	44
RFA_00624	RNase_MRP links to Rfam database...	0.47	0.46	0.47	28	30076	34	6	25	3	33
RFA_00626	rne5 links to Rfam database...	0.89	0.84	0.95	73	56539	20	1	3	16	14
RFA_00627	rne5 links to Rfam database...	0.72	0.68	0.77	59	56876	30	4	14	12	28
RFA_00628	rne5 links to Rfam database...	0.90	0.86	0.95	74	57213	28	0	4	24	12
RFA_00630	rne5 links to Rfam database...	0.61	0.59	0.65	51	56874	38	7	21	10	36
RFA_00639	7SK links to Rfam database...	0.27	0.24	0.30	21	54546	53	9	39	5	66
RFA_00814	R2_retro_el links to Rfam database...	0.86	0.76	0.97	31	25168	10	0	1	9	10
RFA_00815	R2_retro_el links to Rfam database...	0.61	0.61	0.61	25	24490	21	6	10	5	16
RFA_00816	R2_retro_el links to Rfam database...	0.76	0.73	0.79	30	23182	12	8	0	4	11
RFA_00818	R2_retro_el links to Rfam database...	0.31	0.22	0.43	9	20280	13	8	4	1	32
RFA_00819	R2_retro_el links to Rfam database...	0.88	0.80	0.97	33	27932	25	0	1	24	8
RFA_00820	bicoid_3 links to Rfam database...	0.88	0.88	0.89	141	151366	30	1	17	12	19
RFA_00830	bicoid_3 links to Rfam database...	0.49	0.45	0.53	69	152498	105	6	55	44	85
SRP_00002	Metazoa_SRP links to Rfam database...	0.87	0.85	0.89	87	45052	12	4	7	1	15
SRP_00006	Metazoa_SRP links to Rfam database...	0.86	0.84	0.88	85	45656	15	3	9	3	16
SRP_00011	Plant_SRP links to Rfam database...	0.50	0.42	0.60	44	46287	30	0	29	1	60
SRP_00015	Plant_SRP links to Rfam database...	0.82	0.72	0.93	71	46284	11	0	5	6	28
SRP_00016	Archaea_SRP links to Rfam database...	0.92	0.89	0.95	97	47793	7	0	5	2	12
SRP_00018	Fungi_SRP links to Rfam database...	0.72	0.69	0.76	56	38429	30	1	17	12	25
SRP_00019	Fungi_SRP links to Rfam database...	0.89	0.86	0.93	78	35962	11	4	2	5	13
SRP_00023	-	0.00	0.00	0.00	0	20860	50	13	37	0	35
SRP_00024	Bacteria_large_SRP links to Rfam database...	0.80	0.77	0.83	67	37594	14	4	10	0	20
SRP_00026	Bacteria_large_SRP links to Rfam database...	0.67	0.67	0.66	59	36767	38	2	28	8	29
SRP_00027	Bacteria_large_SRP links to Rfam database...	0.65	0.59	0.73	51	37058	19	3	16	0	36
SRP_00030	Bacteria_large_SRP links to Rfam database...	0.76	0.77	0.76	68	36766	24	4	18	2	20
SRP_00031	Bacteria_large_SRP links to Rfam database...	0.72	0.72	0.73	64	36227	25	2	22	1	25
SRP_00037	Bacteria_large_SRP links to Rfam database...	0.62	0.52	0.74	45	36524	16	1	15	0	42
SRP_00060	Metazoa_SRP links to Rfam database...	0.94	0.91	0.97	91	44457	10	0	3	7	9
SRP_00061	Metazoa_SRP links to Rfam database...	0.94	0.92	0.97	92	44755	11	0	3	8	8
SRP_00069	Fungi_SRP links to Rfam database...	0.79	0.76	0.81	65	34373	17	4	11	2	20
SRP_00070	Fungi_SRP links to Rfam database...	0.30	0.33	0.28	40	126611	114	30	75	9	81
SRP_00073	Fungi_SRP links to Rfam database...	0.67	0.70	0.64	50	38982	42	6	22	14	21
SRP_00076	-	0.00	0.00	0.00	0	25358	80	15	52	13	39
SRP_00079	Plant_SRP links to Rfam database...	0.68	0.60	0.78	53	41837	20	3	12	5	35
SRP_00085	Plant_SRP links to Rfam database...	0.71	0.63	0.79	64	45370	19	4	13	2	37
SRP_00086	Metazoa_SRP links to Rfam database...	0.95	0.94	0.97	94	44156	6	0	3	3	6
SRP_00087	Fungi_SRP links to Rfam database...	0.18	0.21	0.15	12	37323	73	22	44	7	46
SRP_00088	Bacteria_large_SRP links to Rfam database...	0.63	0.64	0.63	57	34100	34	3	31	0	32
SRP_00089	Bacteria_large_SRP links to Rfam database...	0.84	0.81	0.88	73	35695	10	1	9	0	17
SRP_00090	Bacteria_large_SRP links to Rfam database...	0.70	0.64	0.75	58	35434	21	1	18	2	32
SRP_00091	Fungi_SRP links to Rfam database...	0.80	0.80	0.81	76	52881	25	4	14	7	19
SRP_00099	Plant_SRP links to Rfam database...	0.60	0.61	0.59	58	44751	43	7	34	2	37
SRP_00104	Fungi_SRP links to Rfam database...	0.49	0.54	0.45	37	34370	53	7	39	7	32
SRP_00108	-	0.69	0.67	0.70	47	38436	26	4	16	6	23
SRP_00117	Metazoa_SRP links to Rfam database...	0.84	0.74	0.95	75	45372	6	0	4	2	27
SRP_00118	-	0.59	0.49	0.71	47	39274	19	0	19	0	48
SRP_00120	-	0.90	0.84	0.97	72	37327	4	1	1	2	14
SRP_00124	Metazoa_SRP links to Rfam database...	0.56	0.53	0.59	45	37052	35	4	27	4	40
SRP_00127	Fungi_SRP links to Rfam database...	0.71	0.68	0.75	81	72282	32	8	19	5	38
SRP_00130	Archaea_SRP links to Rfam database...	0.36	0.32	0.40	31	49693	46	7	39	0	66
SRP_00136	Fungi_SRP links to Rfam database...	0.45	0.46	0.45	33	44179	48	9	32	7	38
SRP_00142	Archaea_SRP links to Rfam database...	0.63	0.59	0.68	55	45975	28	2	24	2	38
SRP_00143	Archaea_SRP links to Rfam database...	0.80	0.78	0.81	79	49673	25	1	17	7	22
SRP_00144	Archaea_SRP links to Rfam database...	0.74	0.73	0.75	69	46573	27	1	22	4	25
SRP_00148	Fungi_SRP links to Rfam database...	0.45	0.43	0.49	37	50010	50	3	36	11	50
SRP_00152	Plant_SRP links to Rfam database...	0.67	0.63	0.71	65	45661	28	1	26	1	38
SRP_00157	Fungi_SRP links to Rfam database...	0.39	0.42	0.37	30	44171	59	14	38	7	42
SRP_00158	Fungi_SRP links to Rfam database...	0.35	0.40	0.32	46	124105	107	41	59	7	69
SRP_00160	Fungi_SRP links to Rfam database...	0.43	0.38	0.49	49	86219	54	3	49	2	81
SRP_00167	-	0.35	0.31	0.40	26	38716	44	6	33	5	58
SRP_00171	Metazoa_SRP links to Rfam database...	0.00	0.00	0.00	0	45353	98	15	83	0	88
SRP_00172	-	0.73	0.63	0.86	57	38994	15	0	9	6	34
SRP_00173	Bacteria_large_SRP links to Rfam database...	0.72	0.70	0.73	63	38140	26	1	22	3	27
SRP_00174	Bacteria_large_SRP links to Rfam database...	0.76	0.76	0.77	65	38697	25	4	15	6	21
SRP_00175	Fungi_SRP links to Rfam database...	0.47	0.42	0.53	35	44485	36	4	27	5	49
SRP_00178	Plant_SRP links to Rfam database...	0.82	0.75	0.90	77	45667	11	1	8	2	25
SRP_00180	-	0.68	0.67	0.69	36	22526	29	3	13	13	18
SRP_00181	Plant_SRP links to Rfam database...	0.33	0.29	0.37	30	45974	52	1	51	0	72
SRP_00182	Plant_SRP links to Rfam database...	0.73	0.70	0.76	71	45963	24	3	19	2	30
SRP_00184	Plant_SRP links to Rfam database...	0.71	0.58	0.88	58	45990	12	0	8	4	42
SRP_00197	Archaea_SRP links to Rfam database...	0.43	0.37	0.51	37	49382	36	1	35	0	64
SRP_00199	Archaea_SRP links to Rfam database...	0.78	0.72	0.84	76	50950	15	0	14	1	29
SRP_00201	Archaea_SRP links to Rfam database...	0.87	0.84	0.89	93	47791	13	5	6	2	18
SRP_00202	Archaea_SRP links to Rfam database...	0.91	0.86	0.95	101	54179	7	0	5	2	16
SRP_00203	Archaea_SRP links to Rfam database...	0.80	0.81	0.79	85	48720	29	1	22	6	20
SRP_00204	Archaea_SRP links to Rfam database...	0.67	0.66	0.68	67	49043	32	6	25	1	35
SRP_00206	Archaea_SRP links to Rfam database...	0.84	0.83	0.85	90	47789	17	5	11	1	18
SRP_00208	Archaea_SRP links to Rfam database...	0.71	0.64	0.79	65	46583	18	2	15	1	36
SRP_00230	Fungi_SRP links to Rfam database...	0.78	0.76	0.80	68	39536	21	3	14	4	22
SRP_00234	Bacteria_large_SRP links to Rfam database...	0.78	0.76	0.80	65	36234	21	1	15	5	21
SRP_00241	Plant_SRP links to Rfam database...	0.55	0.57	0.53	47	45967	44	11	31	2	35
SRP_00252	Metazoa_SRP links to Rfam database...	0.58	0.56	0.60	50	49057	37	9	25	3	39
SRP_00253	Metazoa_SRP links to Rfam database...	0.66	0.67	0.65	60	49362	38	6	27	5	30
SRP_00254	Fungi_SRP links to Rfam database...	0.50	0.54	0.47	33	32315	42	11	26	5	28
SRP_00257	Metazoa_SRP links to Rfam database...	0.84	0.83	0.84	90	50933	19	4	13	2	18
SRP_00261	-	0.80	0.76	0.84	79	45357	16	3	12	1	25
SRP_00263	-	0.70	0.67	0.72	70	48419	27	10	17	0	34
SRP_00265	Fungi_SRP links to Rfam database...	0.55	0.59	0.51	43	41244	53	9	32	12	30
SRP_00267	Metazoa_SRP links to Rfam database...	0.79	0.78	0.80	75	44457	25	3	16	6	21
SRP_00276	Archaea_SRP links to Rfam database...	0.87	0.85	0.89	94	50615	13	5	7	1	16
SRP_00278	Archaea_SRP links to Rfam database...	0.81	0.73	0.89	77	45969	12	0	10	2	28
SRP_00282	Metazoa_SRP links to Rfam database...	0.35	0.37	0.33	23	43296	54	12	34	8	40
SRP_00286	Fungi_SRP links to Rfam database...	0.65	0.59	0.72	102	136884	48	2	38	8	72
SRP_00287	Fungi_SRP links to Rfam database...	0.64	0.58	0.71	94	141646	50	7	31	12	68
SRP_00290	Fungi_SRP links to Rfam database...	0.74	0.72	0.77	97	100450	39	2	27	10	38
SRP_00292	Fungi_SRP links to Rfam database...	0.65	0.62	0.69	108	137393	57	1	48	8	65
SRP_00294	Fungi_SRP links to Rfam database...	0.57	0.48	0.68	80	129168	41	2	36	3	87
SRP_00299	Metazoa_SRP links to Rfam database...	0.69	0.68	0.70	67	44157	30	3	26	1	32
SRP_00301	Fungi_SRP links to Rfam database...	0.86	0.85	0.88	73	32557	15	1	9	5	13
SRP_00302	Fungi_SRP links to Rfam database...	0.41	0.31	0.56	25	41571	27	3	17	7	56
SRP_00308	Bacteria_large_SRP links to Rfam database...	0.62	0.59	0.65	52	36235	30	8	20	2	36
SRP_00317	Metazoa_SRP links to Rfam database...	0.94	0.89	0.99	87	45062	9	0	1	8	11
SRP_00321	Archaea_SRP links to Rfam database...	0.77	0.75	0.79	81	47483	24	3	19	2	27
SRP_00322	Archaea_SRP links to Rfam database...	0.71	0.66	0.76	72	48421	24	4	19	1	37
SRP_00323	Archaea_SRP links to Rfam database...	0.92	0.92	0.93	98	47173	11	0	7	4	9
SRP_00330	Archaea_SRP links to Rfam database...	0.50	0.44	0.57	42	50012	33	1	31	1	53
SRP_00332	Archaea_SRP links to Rfam database...	0.84	0.81	0.87	86	50304	16	6	7	3	20
SRP_00335	Bacteria_large_SRP links to Rfam database...	0.32	0.44	0.24	17	35173	76	26	29	21	22
SRP_00336	-	0.34	0.31	0.36	24	38994	43	6	36	1	53
SRP_00337	Bacteria_large_SRP links to Rfam database...	0.70	0.68	0.73	62	35426	25	2	21	2	29
SRP_00339	Archaea_SRP links to Rfam database...	0.67	0.64	0.70	60	44465	29	5	21	3	34
SRP_00340	Metazoa_SRP links to Rfam database...	0.55	0.59	0.52	48	41236	46	8	36	2	34
SRP_00345	-	0.29	0.31	0.27	16	20647	49	11	32	6	36
SRP_00347	Metazoa_SRP links to Rfam database...	0.83	0.81	0.84	78	46572	20	4	11	5	18
SRP_00348	-	0.52	0.47	0.57	46	46890	35	5	30	0	52
SRP_00353	-	0.87	0.82	0.92	82	37861	8	0	7	1	18
SRP_00354	-	0.77	0.76	0.78	71	38690	23	0	20	3	22
SRP_00355	-	0.83	0.81	0.84	78	41812	19	2	13	4	18
SRP_00361	Plant_SRP links to Rfam database...	0.73	0.71	0.74	64	41819	31	3	19	9	26
SRP_00371	Fungi_SRP links to Rfam database...	0.75	0.74	0.76	61	36235	23	2	17	4	21
SRP_00382	Fungi_SRP links to Rfam database...	0.59	0.56	0.61	96	141621	73	6	55	12	74
TMR_00038	tmRNA links to Rfam database...	0.22	0.20	0.25	22	71166	68	9	56	3	88
TMR_00046	tmRNA links to Rfam database...	0.61	0.56	0.66	54	62753	34	4	24	6	42
TMR_00047	tmRNA links to Rfam database...	0.28	0.32	0.25	18	48445	64	15	38	11	39
TMR_00048	tmRNA links to Rfam database...	0.39	0.34	0.46	32	64911	46	2	35	9	63
TMR_00049	tmRNA links to Rfam database...	0.52	0.53	0.51	46	63100	56	9	35	12	41
TMR_00051	tmRNA links to Rfam database...	0.67	0.61	0.75	57	65627	36	1	18	17	37
TMR_00055	tmRNA links to Rfam database...	0.24	0.20	0.28	23	78922	58	8	50	0	91
TMR_00064	tmRNA links to Rfam database...	0.42	0.38	0.48	39	76946	50	17	26	7	64
TMR_00073	tmRNA links to Rfam database...	0.59	0.37	0.93	43	65657	4	0	3	1	74
TMR_00076	tmRNA links to Rfam database...	0.34	0.34	0.34	34	70776	72	14	52	6	66
TMR_00106	tmRNA links to Rfam database...	0.47	0.33	0.68	39	90043	21	6	12	3	81
TMR_00144	tmRNA links to Rfam database...	0.30	0.25	0.36	26	74232	52	7	40	5	77
TMR_00150	tmRNA links to Rfam database...	0.74	0.62	0.90	26	43042	21	0	3	18	16
TMR_00179	tmRNA links to Rfam database...	0.55	0.56	0.54	55	67059	57	10	37	10	43
TMR_00199	tmRNA links to Rfam database...	0.59	0.58	0.60	53	62747	42	14	21	7	39
TMR_00223	tmRNA links to Rfam database...	0.21	0.19	0.24	18	64186	61	11	46	4	77
TMR_00238	tmRNA links to Rfam database...	0.34	0.35	0.34	35	84562	76	10	59	7	66
TMR_00239	tmRNA links to Rfam database...	0.50	0.50	0.49	48	61679	51	9	40	2	48
TMR_00246	-	0.64	0.59	0.69	20	78181	77	0	9	68	14
TMR_00274	tmRNA links to Rfam database...	0.30	0.30	0.29	32	66685	84	13	65	6	73
TMR_00279	tmRNA links to Rfam database...	0.52	0.49	0.55	46	68923	48	8	29	11	48
TMR_00283	tmRNA links to Rfam database...	0.56	0.46	0.69	44	65277	23	9	11	3	52
TMR_00310	tmRNA links to Rfam database...	0.67	0.64	0.69	63	63812	32	5	23	4	35
TMR_00317	tmRNA links to Rfam database...	0.62	0.63	0.61	64	68160	45	14	27	4	38
TMR_00352	tmRNA links to Rfam database...	0.20	0.16	0.25	12	95218	60	12	24	24	63
TMR_00409	tmRNA links to Rfam database...	0.64	0.63	0.64	29	68590	36	7	9	20	17
TMR_00411	tmRNA links to Rfam database...	0.28	0.24	0.32	21	61009	54	9	36	9	66
TMR_00415	tmRNA links to Rfam database...	0.47	0.35	0.65	35	67107	19	2	17	0	66
TMR_00419	tmRNA links to Rfam database...	0.30	0.30	0.31	33	81704	77	12	61	4	78
TMR_00422	tmRNA links to Rfam database...	0.54	0.55	0.53	51	67800	54	10	35	9	41
TMR_00458	tmRNA links to Rfam database...	0.25	0.16	0.38	15	63507	32	4	20	8	78
TMR_00478	tmRNA links to Rfam database...	0.42	0.38	0.46	38	71928	48	9	35	4	61
TMR_00553	tmRNA links to Rfam database...	0.40	0.38	0.43	31	48133	47	3	38	6	50
TMR_00560	tmRNA links to Rfam database...	0.49	0.37	0.67	36	61021	24	2	16	6	62
TMR_00568	tmRNA links to Rfam database...	0.52	0.35	0.78	35	60681	18	0	10	8	64
TMR_00579	tmRNA links to Rfam database...	0.28	0.31	0.25	28	80491	90	19	63	8	62
TMR_00581	tmRNA links to Rfam database...	0.38	0.35	0.41	34	62399	55	4	44	7	64
TMR_00587	tmRNA links to Rfam database...	0.69	0.66	0.73	66	61334	30	4	21	5	34
TMR_00588	tmRNA links to Rfam database...	0.30	0.27	0.34	27	77342	58	17	35	6	74
TMR_00594	tmRNA links to Rfam database...	0.24	0.24	0.24	25	79296	84	16	64	4	79
TMR_00596	tmRNA links to Rfam database...	0.24	0.23	0.25	22	78122	77	13	53	11	73
TMR_00600	tmRNA links to Rfam database...	0.13	0.12	0.15	14	79706	82	13	67	2	101
TMR_00603	tmRNA links to Rfam database...	0.68	0.65	0.72	28	60339	61	6	5	50	15
TMR_00606	tmRNA links to Rfam database...	0.41	0.40	0.43	43	68905	65	3	55	7	64
TMR_00625	tmRNA links to Rfam database...	0.22	0.23	0.21	24	78888	95	26	65	4	82
TMR_00706	tmRNA links to Rfam database...	0.64	0.57	0.72	59	66348	26	6	17	3	44
TMR_00712	tmRNA links to Rfam database...	0.21	0.19	0.23	21	78515	79	14	56	9	88

^top

Performance of Afold - scored lower in this pairwise comparison

1. Total counts & total scores for Afold

Total Base Pair Counts
Total TP	27269
Total TN	36551929
Total FP	30956
Total FP CONTRA	4375
Total FP INCONS	21226
Total FP COMP	5355
Total FN	25495

Total Scores
MCC	0.516
Average MCC ± 95% Confidence Intervals	0.519 ± 0.017
Sensitivity	0.517
Positive Predictive Value	0.516
Nr of predictions	525

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2. Individual counts for Afold [ download as .csv ]

RNA Chain	Rfam family	MCC	SENS	PPV	TP	TN	FP	FP CONTRA	FP INCONS	FP COMP	FN
ASE_00001	RNaseP_arch links to Rfam database...	0.75	0.72	0.78	54	34122	23	3	12	8	21
ASE_00002	RNaseP_arch links to Rfam database...	0.62	0.62	0.63	45	35439	33	4	23	6	28
ASE_00004	RNaseP_bact_a links to Rfam database...	0.51	0.52	0.51	50	47797	49	10	38	1	47
ASE_00005	RNaseP_bact_a links to Rfam database...	0.61	0.56	0.66	66	57870	39	0	34	5	51
ASE_00006	RNaseP_bact_a links to Rfam database...	0.66	0.67	0.65	62	47491	36	7	26	3	31
ASE_00007	RNaseP_bact_a links to Rfam database...	0.56	0.53	0.59	58	59586	45	1	40	4	52
ASE_00009	RNaseP_arch links to Rfam database...	0.79	0.76	0.82	51	26044	13	0	11	2	16
ASE_00012	RNaseP_bact_a links to Rfam database...	0.41	0.39	0.43	48	73808	72	1	63	8	75
ASE_00014	RNaseP_arch links to Rfam database...	0.24	0.25	0.24	26	54178	82	8	73	1	80
ASE_00016	-	0.60	0.62	0.58	38	66001	93	3	24	66	23
ASE_00017	RNaseP_nuc links to Rfam database...	0.26	0.28	0.24	18	50965	74	6	51	17	46
ASE_00020	RNaseP_bact_a links to Rfam database...	0.57	0.54	0.60	68	73807	46	6	39	1	58
ASE_00021	RNaseP_bact_a links to Rfam database...	0.54	0.51	0.59	81	104058	66	7	50	9	79
ASE_00023	RNaseP_bact_a links to Rfam database...	0.66	0.64	0.69	81	84137	42	3	34	5	46
ASE_00024	-	0.74	0.70	0.78	49	29340	27	0	14	13	21
ASE_00028	RNaseP_bact_b links to Rfam database...	0.58	0.56	0.61	70	84551	54	4	41	9	56
ASE_00029	RNaseP_bact_a links to Rfam database...	0.55	0.53	0.56	65	82912	55	5	46	4	57
ASE_00030	RNaseP_bact_a links to Rfam database...	0.61	0.59	0.63	85	85357	50	5	44	1	60
ASE_00032	RNaseP_bact_a links to Rfam database...	0.55	0.53	0.58	62	80094	50	6	38	6	56
ASE_00033	RNaseP_bact_a links to Rfam database...	0.33	0.31	0.36	38	64874	70	4	64	2	83
ASE_00036	RNaseP_bact_a links to Rfam database...	0.41	0.39	0.43	52	75735	71	8	60	3	80
ASE_00037	RNaseP_bact_a links to Rfam database...	0.34	0.32	0.37	35	59245	63	0	60	3	75
ASE_00038	RNaseP_bact_a links to Rfam database...	0.53	0.52	0.54	53	53529	48	4	42	2	48
ASE_00040	RNaseP_bact_a links to Rfam database...	0.50	0.47	0.53	63	78883	63	5	52	6	70
ASE_00041	RNaseP_bact_a links to Rfam database...	0.53	0.51	0.55	55	57530	51	2	43	6	53
ASE_00042	RNaseP_bact_a links to Rfam database...	0.44	0.42	0.47	61	89969	73	3	67	3	84
ASE_00044	RNaseP_bact_a links to Rfam database...	0.74	0.70	0.78	74	54520	26	3	18	5	31
ASE_00045	RNaseP_bact_b links to Rfam database...	0.65	0.65	0.65	52	47198	37	7	21	9	28
ASE_00046	RNaseP_bact_a links to Rfam database...	0.59	0.55	0.63	57	50313	33	2	31	0	46
ASE_00047	RNaseP_bact_a links to Rfam database...	0.40	0.38	0.43	50	74188	68	4	63	1	80
ASE_00053	RNaseP_bact_a links to Rfam database...	0.54	0.52	0.56	69	79278	61	12	42	7	64
ASE_00056	-	0.34	0.35	0.34	25	30803	52	4	44	4	47
ASE_00064	RNaseP_bact_a links to Rfam database...	0.43	0.43	0.44	38	45364	54	5	44	5	51
ASE_00066	RNaseP_bact_a links to Rfam database...	0.57	0.55	0.59	71	72269	52	4	46	2	59
ASE_00068	RNaseP_bact_a links to Rfam database...	0.33	0.32	0.36	27	37599	50	2	47	1	58
ASE_00074	RNaseP_bact_a links to Rfam database...	0.48	0.47	0.50	56	67784	57	7	49	1	63
ASE_00075	RNaseP_bact_a links to Rfam database...	0.65	0.59	0.72	95	108679	46	3	34	9	67
ASE_00076	RNaseP_bact_a links to Rfam database...	0.57	0.54	0.61	64	68160	42	7	34	1	54
ASE_00077	RNaseP_bact_a links to Rfam database...	0.52	0.51	0.54	44	45068	39	6	32	1	42
ASE_00078	RNaseP_bact_a links to Rfam database...	0.67	0.67	0.67	56	42988	32	5	22	5	27
ASE_00079	RNaseP_bact_a links to Rfam database...	0.50	0.48	0.52	48	55519	45	2	42	1	52
ASE_00080	RNaseP_bact_a links to Rfam database...	0.50	0.48	0.52	59	71518	59	3	51	5	64
ASE_00081	RNaseP_bact_a links to Rfam database...	0.46	0.45	0.46	44	49675	53	5	46	2	53
ASE_00082	RNaseP_bact_a links to Rfam database...	0.57	0.54	0.61	63	70396	51	1	40	10	53
ASE_00083	RNaseP_bact_a links to Rfam database...	0.71	0.67	0.76	74	62383	32	1	23	8	36
ASE_00084	RNaseP_bact_a links to Rfam database...	0.72	0.71	0.73	70	53532	30	6	20	4	29
ASE_00087	RNaseP_bact_a links to Rfam database...	0.56	0.51	0.61	74	88288	54	5	43	6	70
ASE_00089	-	0.39	0.37	0.41	29	31305	45	0	41	4	50
ASE_00090	RNaseP_bact_a links to Rfam database...	0.46	0.47	0.47	47	55510	59	6	48	5	54
ASE_00092	RNaseP_bact_a links to Rfam database...	0.68	0.65	0.72	73	63444	35	3	26	6	40
ASE_00096	RNaseP_bact_a links to Rfam database...	0.51	0.50	0.53	57	63439	51	2	48	1	58
ASE_00104	RNaseP_bact_a links to Rfam database...	0.53	0.50	0.56	60	64153	49	8	40	1	59
ASE_00111	RNaseP_nuc links to Rfam database...	0.15	0.19	0.12	11	49992	89	31	52	6	46
ASE_00112	RNaseP_bact_a links to Rfam database...	0.77	0.72	0.82	84	75364	25	5	13	7	32
ASE_00114	RNaseP_bact_b links to Rfam database...	0.40	0.40	0.39	31	45372	58	6	42	10	46
ASE_00115	RNaseP_bact_a links to Rfam database...	0.55	0.54	0.56	55	54517	51	1	42	8	46
ASE_00116	RNaseP_arch links to Rfam database...	0.24	0.24	0.23	16	31557	54	8	45	1	50
ASE_00118	RNaseP_bact_a links to Rfam database...	0.38	0.38	0.39	39	60625	64	5	57	2	63
ASE_00119	RNaseP_bact_a links to Rfam database...	0.63	0.60	0.67	65	62738	35	1	31	3	43
ASE_00120	RNaseP_arch links to Rfam database...	0.37	0.35	0.38	33	46885	53	9	44	0	61
ASE_00121	RNaseP_arch links to Rfam database...	0.29	0.29	0.29	27	45058	65	8	57	0	65
ASE_00122	RNaseP_bact_a links to Rfam database...	0.28	0.27	0.29	24	43283	60	4	54	2	64
ASE_00123	RNaseP_bact_a links to Rfam database...	0.44	0.42	0.46	36	38425	48	3	39	6	49
ASE_00125	RNaseP_bact_a links to Rfam database...	0.64	0.63	0.65	55	39255	32	4	26	2	33
ASE_00126	RNaseP_bact_a links to Rfam database...	0.74	0.74	0.73	61	40387	27	3	19	5	21
ASE_00128	RNaseP_bact_a links to Rfam database...	0.74	0.72	0.77	72	53207	30	2	20	8	28
ASE_00129	RNaseP_bact_a links to Rfam database...	0.77	0.74	0.80	82	62732	26	3	18	5	29
ASE_00131	RNaseP_bact_a links to Rfam database...	0.62	0.55	0.70	47	39273	31	0	20	11	38
ASE_00132	RNaseP_bact_a links to Rfam database...	0.63	0.61	0.65	58	50314	34	7	24	3	37
ASE_00134	RNaseP_bact_a links to Rfam database...	0.43	0.42	0.44	40	50313	54	7	43	4	55
ASE_00135	RNaseP_bact_a links to Rfam database...	0.45	0.44	0.45	48	63084	63	8	50	5	61
ASE_00136	RNaseP_bact_a links to Rfam database...	0.69	0.65	0.72	60	48122	28	3	20	5	32
ASE_00137	RNaseP_bact_a links to Rfam database...	0.44	0.43	0.45	42	48423	53	4	47	2	56
ASE_00138	RNaseP_bact_a links to Rfam database...	0.51	0.49	0.53	40	40395	36	4	31	1	41
ASE_00139	RNaseP_bact_a links to Rfam database...	0.83	0.77	0.89	80	54195	16	2	8	6	24
ASE_00140	RNaseP_bact_a links to Rfam database...	0.62	0.57	0.67	71	70770	38	6	29	3	54
ASE_00144	-	0.37	0.38	0.37	37	58211	64	12	51	1	60
ASE_00145	RNaseP_arch links to Rfam database...	0.40	0.40	0.40	44	70016	69	9	56	4	67
ASE_00146	RNaseP_bact_a links to Rfam database...	0.55	0.52	0.59	64	70768	50	2	42	6	60
ASE_00148	RNaseP_arch links to Rfam database...	0.63	0.60	0.65	93	112433	53	4	45	4	61
ASE_00151	RNaseP_bact_a links to Rfam database...	0.26	0.26	0.27	25	51912	66	9	57	0	73
ASE_00153	RNaseP_nuc links to Rfam database...	0.66	0.67	0.65	49	57555	68	2	24	42	24
ASE_00154	RNaseP_arch links to Rfam database...	0.57	0.55	0.58	59	65240	45	4	38	3	48
ASE_00155	RNaseP_arch links to Rfam database...	0.50	0.48	0.52	68	93396	69	10	54	5	74
ASE_00159	-	0.63	0.59	0.68	36	34927	46	0	17	29	25
ASE_00160	-	0.86	0.86	0.86	43	23821	31	0	7	24	7
ASE_00161	RNaseP_bact_b links to Rfam database...	0.27	0.29	0.26	25	53531	73	15	57	1	62
ASE_00163	RNaseP_bact_a links to Rfam database...	0.64	0.63	0.66	59	53211	43	4	27	12	34
ASE_00165	RNaseP_bact_a links to Rfam database...	0.64	0.60	0.67	61	52884	31	5	25	1	40
ASE_00168	RNaseP_nuc links to Rfam database...	0.31	0.38	0.25	24	60631	88	24	47	17	40
ASE_00169	RNaseP_bact_a links to Rfam database...	0.49	0.48	0.52	51	57192	52	6	42	4	56
ASE_00170	RNaseP_bact_a links to Rfam database...	0.70	0.68	0.72	63	48740	27	2	23	2	30
ASE_00171	RNaseP_bact_a links to Rfam database...	0.70	0.69	0.71	65	48425	28	5	21	2	29
ASE_00172	RNaseP_bact_a links to Rfam database...	0.62	0.61	0.63	65	58893	41	8	30	3	41
ASE_00174	RNaseP_bact_a links to Rfam database...	0.59	0.57	0.62	62	60975	42	6	32	4	47
ASE_00175	RNaseP_bact_a links to Rfam database...	0.59	0.59	0.59	63	59925	45	7	36	2	44
ASE_00176	RNaseP_bact_a links to Rfam database...	0.60	0.55	0.64	61	59936	38	5	29	4	49
ASE_00179	RNaseP_bact_a links to Rfam database...	0.64	0.65	0.62	55	44164	35	7	27	1	29
ASE_00180	RNaseP_bact_a links to Rfam database...	0.71	0.69	0.74	69	51267	31	2	22	7	31
ASE_00181	RNaseP_bact_a links to Rfam database...	0.54	0.53	0.55	56	57528	52	3	43	6	50
ASE_00182	RNaseP_bact_a links to Rfam database...	0.60	0.58	0.62	79	84128	49	6	42	1	57
ASE_00183	RNaseP_bact_a links to Rfam database...	0.71	0.70	0.72	79	61316	35	2	28	5	34
ASE_00185	RNaseP_bact_a links to Rfam database...	0.72	0.70	0.74	89	73416	38	6	25	7	39
ASE_00186	RNaseP_bact_a links to Rfam database...	0.73	0.69	0.78	91	78887	30	3	22	5	41
ASE_00187	RNaseP_arch links to Rfam database...	0.50	0.48	0.51	55	68528	58	7	45	6	60
ASE_00190	RNaseP_bact_b links to Rfam database...	0.49	0.46	0.52	41	45372	44	7	31	6	49
ASE_00191	RNaseP_arch links to Rfam database...	0.56	0.52	0.59	32	29592	32	1	21	10	29
ASE_00192	RNaseP_bact_b links to Rfam database...	0.40	0.38	0.42	50	84547	75	6	63	6	83
ASE_00196	RNaseP_arch links to Rfam database...	0.76	0.75	0.77	56	31553	21	2	15	4	19
ASE_00197	RNaseP_bact_a links to Rfam database...	0.49	0.46	0.52	67	89123	66	4	59	3	78
ASE_00198	RNaseP_bact_a links to Rfam database...	0.61	0.59	0.64	60	52556	40	6	28	6	42
ASE_00203	RNaseP_bact_a links to Rfam database...	0.70	0.69	0.72	66	46573	26	7	19	0	30
ASE_00209	RNaseP_arch links to Rfam database...	0.29	0.28	0.30	25	42989	57	4	53	0	63
ASE_00210	RNaseP_arch links to Rfam database...	0.61	0.62	0.60	40	27194	28	6	21	1	25
ASE_00212	RNaseP_bact_a links to Rfam database...	0.70	0.67	0.74	99	93827	39	3	32	4	49
ASE_00213	RNaseP_arch links to Rfam database...	0.72	0.71	0.73	47	27197	18	3	14	1	19
ASE_00214	RNaseP_bact_a links to Rfam database...	0.72	0.72	0.73	74	56178	36	4	24	8	29
ASE_00215	RNaseP_bact_a links to Rfam database...	0.54	0.51	0.57	50	48429	39	4	33	2	49
ASE_00216	RNaseP_bact_a links to Rfam database...	0.67	0.68	0.66	56	39255	31	9	20	2	26
ASE_00217	RNaseP_bact_a links to Rfam database...	0.40	0.37	0.45	33	40396	48	3	38	7	57
ASE_00221	RNaseP_bact_a links to Rfam database...	0.49	0.45	0.54	53	64522	48	3	42	3	64
ASE_00222	RNaseP_arch links to Rfam database...	0.56	0.55	0.56	87	111947	68	8	59	1	70
ASE_00227	RNaseP_bact_a links to Rfam database...	0.25	0.23	0.27	31	78888	84	6	78	0	102
ASE_00228	RNaseP_bact_a links to Rfam database...	0.52	0.53	0.50	46	46879	46	14	32	0	40
ASE_00229	RNaseP_bact_a links to Rfam database...	0.61	0.61	0.62	53	42400	33	8	25	0	34
ASE_00231	RNaseP_bact_a links to Rfam database...	0.65	0.65	0.65	62	47800	33	5	28	0	34
ASE_00232	RNaseP_bact_a links to Rfam database...	0.63	0.64	0.61	54	38415	37	10	24	3	30
ASE_00234	RNaseP_bact_a links to Rfam database...	0.58	0.53	0.62	69	75355	47	3	39	5	60
ASE_00237	RNaseP_nuc links to Rfam database...	0.00	0.00	0.00	0	45676	92	25	52	15	56
ASE_00238	RNaseP_bact_a links to Rfam database...	0.59	0.59	0.60	67	64150	50	2	42	6	47
ASE_00240	RNaseP_bact_a links to Rfam database...	0.58	0.56	0.60	52	46578	44	4	31	9	41
ASE_00241	RNaseP_bact_a links to Rfam database...	0.49	0.49	0.49	43	43868	47	7	38	2	44
ASE_00245	RNaseP_nuc links to Rfam database...	0.89	0.86	0.93	67	55206	39	0	5	34	11
ASE_00246	RNaseP_nuc links to Rfam database...	0.30	0.33	0.27	22	48123	71	17	43	11	45
ASE_00247	RNaseP_nuc links to Rfam database...	0.18	0.19	0.17	12	54213	88	15	45	28	52
ASE_00252	RNaseP_bact_a links to Rfam database...	0.54	0.52	0.56	88	115284	71	5	63	3	80
ASE_00254	RNaseP_bact_a links to Rfam database...	0.49	0.46	0.52	38	36783	39	4	31	4	44
ASE_00255	RNaseP_bact_a links to Rfam database...	0.64	0.62	0.66	80	74570	45	7	34	4	50
ASE_00257	RNaseP_bact_a links to Rfam database...	0.55	0.55	0.55	53	50944	47	4	39	4	44
ASE_00258	RNaseP_nuc links to Rfam database...	0.74	0.72	0.76	39	26745	26	0	12	14	15
ASE_00263	RNaseP_bact_a links to Rfam database...	0.62	0.63	0.62	76	70377	49	5	42	2	44
ASE_00264	RNaseP_nuc links to Rfam database...	0.84	0.79	0.90	79	49053	24	0	9	15	21
ASE_00267	RNaseP_bact_a links to Rfam database...	0.32	0.31	0.34	27	45070	62	5	48	9	61
ASE_00270	RNaseP_bact_a links to Rfam database...	0.76	0.73	0.80	94	72272	29	4	20	5	34
ASE_00274	RNaseP_bact_a links to Rfam database...	0.45	0.44	0.46	45	55513	54	10	43	1	58
ASE_00277	RNaseP_bact_a links to Rfam database...	0.38	0.38	0.38	35	48112	61	9	49	3	56
ASE_00279	RNaseP_bact_a links to Rfam database...	0.68	0.66	0.71	67	53206	35	3	25	7	34
ASE_00280	RNaseP_bact_a links to Rfam database...	0.36	0.36	0.37	35	51909	65	4	55	6	63
ASE_00282	RNaseP_bact_a links to Rfam database...	0.56	0.55	0.57	70	77693	58	5	47	6	57
ASE_00283	RNaseP_bact_a links to Rfam database...	0.75	0.73	0.77	78	61675	30	3	20	7	29
ASE_00284	RNaseP_bact_a links to Rfam database...	0.62	0.60	0.64	65	58210	44	4	32	8	43
ASE_00285	RNaseP_bact_a links to Rfam database...	0.75	0.70	0.80	86	68899	28	3	18	7	36
ASE_00286	RNaseP_bact_a links to Rfam database...	0.43	0.42	0.43	39	46574	63	5	47	11	53
ASE_00287	RNaseP_bact_a links to Rfam database...	0.59	0.55	0.63	57	54856	39	2	31	6	46
ASE_00288	RNaseP_bact_a links to Rfam database...	0.47	0.45	0.48	42	45969	48	6	39	3	51
ASE_00289	RNaseP_bact_a links to Rfam database...	0.66	0.62	0.70	97	100886	45	4	38	3	60
ASE_00291	-	0.38	0.36	0.40	34	48430	53	9	43	1	60
ASE_00292	RNaseP_bact_a links to Rfam database...	0.62	0.58	0.66	80	81689	43	2	39	2	58
ASE_00294	RNaseP_bact_a links to Rfam database...	0.74	0.68	0.80	117	114335	32	2	27	3	54
ASE_00295	RNaseP_bact_a links to Rfam database...	0.63	0.60	0.66	79	73801	42	8	32	2	52
ASE_00296	RNaseP_bact_a links to Rfam database...	0.25	0.24	0.27	35	91676	98	8	87	3	110
ASE_00297	RNaseP_bact_a links to Rfam database...	0.50	0.50	0.51	49	52878	53	4	44	5	49
ASE_00298	RNaseP_bact_a links to Rfam database...	0.28	0.27	0.29	31	67420	79	9	68	2	82
ASE_00299	RNaseP_bact_a links to Rfam database...	0.49	0.48	0.51	48	49361	54	5	41	8	52
ASE_00303	RNaseP_nuc links to Rfam database...	0.54	0.58	0.50	55	67787	68	14	40	14	40
ASE_00305	RNaseP_bact_b links to Rfam database...	0.47	0.47	0.47	40	54529	56	10	36	10	45
ASE_00313	RNaseP_nuc links to Rfam database...	0.72	0.71	0.74	63	62396	45	4	18	23	26
ASE_00321	RNaseP_bact_b links to Rfam database...	0.40	0.40	0.41	35	54530	57	7	43	7	53
ASE_00322	-	0.75	0.81	0.70	39	29347	42	3	14	25	9
ASE_00328	RNaseP_bact_b links to Rfam database...	0.40	0.41	0.40	46	72656	75	3	66	6	66
ASE_00330	RNaseP_nuc links to Rfam database...	0.72	0.71	0.74	64	56193	44	3	20	21	26
ASE_00332	RNaseP_bact_a links to Rfam database...	0.56	0.54	0.59	75	81682	55	2	51	2	63
ASE_00337	RNaseP_nuc links to Rfam database...	0.52	0.54	0.51	38	39265	50	6	31	13	33
ASE_00338	RNaseP_nuc links to Rfam database...	0.67	0.63	0.72	62	66344	41	4	20	17	36
ASE_00340	RNaseP_bact_a links to Rfam database...	0.76	0.73	0.78	62	45977	26	6	11	9	23
ASE_00342	RNaseP_bact_a links to Rfam database...	0.57	0.54	0.60	62	62378	41	5	36	0	53
ASE_00343	RNaseP_bact_a links to Rfam database...	0.34	0.35	0.34	39	83321	88	9	67	12	74
ASE_00344	-	0.95	0.93	0.96	52	27207	21	0	2	19	4
ASE_00346	RNaseP_arch links to Rfam database...	0.31	0.30	0.32	29	48114	65	7	55	3	68
ASE_00350	-	0.87	0.85	0.90	44	29597	31	0	5	26	8
ASE_00359	RNaseP_arch links to Rfam database...	0.49	0.49	0.49	39	42698	49	3	38	8	41
ASE_00361	RNaseP_bact_a links to Rfam database...	0.51	0.49	0.53	62	75349	59	7	48	4	65
ASE_00362	RNaseP_bact_a links to Rfam database...	0.61	0.60	0.61	55	48115	39	6	29	4	36
ASE_00363	RNaseP_bact_a links to Rfam database...	0.53	0.54	0.53	51	51263	47	5	41	1	43
ASE_00364	RNaseP_bact_a links to Rfam database...	0.42	0.42	0.43	44	54182	63	4	55	4	61
ASE_00366	RNaseP_bact_a links to Rfam database...	0.54	0.56	0.53	55	58549	52	10	39	3	43
ASE_00367	RNaseP_bact_a links to Rfam database...	0.28	0.29	0.27	25	42979	68	8	59	1	61
ASE_00369	RNaseP_bact_a links to Rfam database...	0.56	0.55	0.58	59	55843	44	4	39	1	48
ASE_00370	RNaseP_bact_a links to Rfam database...	0.63	0.63	0.62	53	41820	33	7	25	1	31
ASE_00372	RNaseP_bact_a links to Rfam database...	0.63	0.62	0.65	62	51907	39	6	28	5	38
ASE_00374	RNaseP_bact_a links to Rfam database...	0.53	0.52	0.54	46	44765	40	8	31	1	42
ASE_00375	RNaseP_bact_a links to Rfam database...	0.70	0.66	0.74	73	60280	31	1	24	6	37
ASE_00376	RNaseP_bact_a links to Rfam database...	0.48	0.46	0.50	48	56857	52	4	44	4	57
ASE_00379	RNaseP_bact_a links to Rfam database...	0.57	0.55	0.60	49	45974	41	3	30	8	40
ASE_00380	RNaseP_bact_a links to Rfam database...	0.57	0.55	0.59	54	54854	41	2	36	3	45
ASE_00382	RNaseP_bact_a links to Rfam database...	0.49	0.49	0.50	41	41823	45	6	35	4	43
ASE_00383	RNaseP_bact_a links to Rfam database...	0.58	0.55	0.62	58	54521	40	3	33	4	47
ASE_00384	RNaseP_bact_a links to Rfam database...	0.41	0.39	0.43	36	48432	58	2	46	10	56
ASE_00385	RNaseP_bact_a links to Rfam database...	0.42	0.43	0.41	35	41819	53	6	45	2	46
ASE_00386	RNaseP_bact_a links to Rfam database...	0.65	0.65	0.65	62	50307	41	3	31	7	34
ASE_00387	RNaseP_bact_a links to Rfam database...	0.43	0.43	0.43	45	55841	59	6	53	0	59
ASE_00388	RNaseP_bact_a links to Rfam database...	0.43	0.42	0.44	37	45669	53	3	44	6	52
ASE_00390	RNaseP_bact_a links to Rfam database...	0.44	0.42	0.47	36	42118	52	6	35	11	49
ASE_00393	RNaseP_bact_a links to Rfam database...	0.37	0.35	0.39	33	47811	58	2	49	7	60
ASE_00394	RNaseP_bact_a links to Rfam database...	0.69	0.68	0.70	63	46881	29	5	22	2	30
ASE_00395	RNaseP_bact_a links to Rfam database...	0.65	0.63	0.68	53	41538	35	1	24	10	31
ASE_00396	RNaseP_bact_a links to Rfam database...	0.16	0.16	0.16	13	41535	71	2	66	3	70
ASE_00397	RNaseP_bact_a links to Rfam database...	0.54	0.54	0.54	57	54510	51	4	44	3	48
ASE_00398	RNaseP_bact_a links to Rfam database...	0.61	0.58	0.65	60	55852	37	1	32	4	44
ASE_00400	RNaseP_bact_a links to Rfam database...	0.53	0.53	0.54	56	57866	51	7	41	3	50
ASE_00401	RNaseP_bact_a links to Rfam database...	0.52	0.53	0.51	67	76897	65	13	51	1	59
ASE_00402	RNaseP_bact_a links to Rfam database...	0.41	0.40	0.43	34	42406	52	7	39	6	51
ASE_00403	RNaseP_bact_a links to Rfam database...	0.44	0.42	0.47	45	55849	55	4	47	4	62
ASE_00404	RNaseP_bact_a links to Rfam database...	0.55	0.54	0.57	46	42990	43	0	35	8	39
ASE_00408	-	0.48	0.48	0.49	34	32316	41	2	33	6	37
ASE_00411	RNaseP_bact_a links to Rfam database...	0.35	0.35	0.35	31	49366	63	7	51	5	58
ASE_00413	RNaseP_bact_a links to Rfam database...	0.55	0.58	0.52	47	44461	44	13	30	1	34
ASE_00415	RNaseP_bact_a links to Rfam database...	0.51	0.51	0.51	53	54843	53	7	43	3	50
ASE_00416	RNaseP_bact_a links to Rfam database...	0.65	0.61	0.68	78	77307	43	0	36	7	49
ASE_00417	RNaseP_arch links to Rfam database...	0.36	0.37	0.35	37	54508	73	10	60	3	63
ASE_00418	RNaseP_arch links to Rfam database...	0.20	0.21	0.20	16	38701	67	12	52	3	59
ASE_00419	RNaseP_bact_a links to Rfam database...	0.75	0.73	0.78	75	54850	26	5	16	5	28
ASE_00420	RNaseP_nuc links to Rfam database...	0.62	0.63	0.61	40	43299	55	3	23	29	23
ASE_00422	RNaseP_bact_a links to Rfam database...	0.44	0.44	0.45	41	46880	56	5	45	6	53
ASE_00426	RNaseP_bact_a links to Rfam database...	0.28	0.28	0.28	30	60967	78	7	71	0	78
ASE_00427	RNaseP_nuc links to Rfam database...	0.15	0.20	0.12	9	40678	81	17	51	13	37
ASE_00428	RNaseP_bact_a links to Rfam database...	0.51	0.50	0.53	62	76520	58	5	49	4	63
ASE_00429	-	0.43	0.44	0.43	29	28136	40	8	30	2	37
ASE_00430	RNaseP_bact_a links to Rfam database...	0.64	0.63	0.66	61	46878	39	5	27	7	36
ASE_00431	RNaseP_bact_a links to Rfam database...	0.53	0.49	0.56	47	46276	41	6	31	4	48
ASE_00434	RNaseP_bact_b links to Rfam database...	0.61	0.60	0.62	66	68159	48	7	33	8	44
ASE_00437	RNaseP_bact_a links to Rfam database...	0.42	0.39	0.46	53	79285	64	4	59	1	82
ASE_00438	RNaseP_bact_a links to Rfam database...	0.46	0.43	0.50	50	65965	52	3	48	1	66
ASE_00441	RNaseP_bact_a links to Rfam database...	0.77	0.72	0.83	81	64163	30	1	16	13	31
ASE_00447	RNaseP_bact_a links to Rfam database...	0.47	0.45	0.50	52	60274	55	1	51	3	64
ASE_00448	RNaseP_bact_a links to Rfam database...	0.22	0.22	0.23	25	64150	91	6	80	5	87
ASE_00451	RNaseP_bact_a links to Rfam database...	0.61	0.57	0.66	71	70768	40	2	35	3	54
ASE_00452	-	0.85	0.85	0.85	33	20871	29	0	6	23	6
ASE_00453	-	0.58	0.62	0.55	32	34133	50	7	19	24	20
ASE_00454	RNaseP_nuc links to Rfam database...	0.48	0.48	0.48	30	43302	59	2	31	26	33
CRW_00004	-	0.45	0.46	0.45	60	154156	110	10	64	36	71
CRW_00005	-	0.55	0.55	0.55	73	137943	86	13	46	27	59
CRW_00007	-	0.33	0.36	0.30	48	144832	112	35	76	1	85
CRW_00009	-	0.58	0.59	0.57	81	137934	83	9	51	23	57
CRW_00010	-	0.78	0.78	0.79	98	102707	45	6	20	19	28
CRW_00011	-	0.68	0.70	0.66	97	118194	63	7	43	13	41
CRW_00013	Intron_gpI links to Rfam database...	0.22	0.22	0.22	25	103625	113	13	77	23	90
CRW_00014	-	0.49	0.48	0.50	59	103621	74	10	50	14	64
CRW_00016	Intron_gpI links to Rfam database...	0.65	0.62	0.69	74	77313	47	5	29	13	46
CRW_00017	-	0.38	0.42	0.34	38	92124	95	19	54	22	53
CRW_00019	-	0.74	0.77	0.71	105	127617	51	15	28	8	32
CRW_00423	-	0.20	0.21	0.19	40	242347	179	28	141	10	149
CRW_00429	-	0.16	0.16	0.16	37	306704	200	45	150	5	196
CRW_00601	-	0.20	0.25	0.17	17	186863	159	41	45	73	51
CRW_00602	-	0.09	0.13	0.06	9	223962	193	73	71	49	59
CRW_00603	-	0.00	0.00	0.00	0	192395	179	52	63	64	68
CRW_00605	-	0.54	0.54	0.54	38	183850	134	11	22	101	32
CRW_00608	-	0.77	0.76	0.79	60	35702	26	2	14	10	19
CRW_00610	Intron_gpI links to Rfam database...	0.42	0.42	0.43	34	36235	46	6	40	0	47
CRW_00612	-	0.63	0.61	0.66	57	270393	172	1	29	142	36
CRW_00613	Intron_gpI links to Rfam database...	0.46	0.42	0.51	33	34915	41	2	30	9	45
CRW_00614	Intron_gpI links to Rfam database...	0.07	0.09	0.06	5	121689	141	24	53	64	52
CRW_00619	Intron_gpI links to Rfam database...	0.38	0.42	0.34	31	164933	138	25	36	77	42
CRW_00620	Intron_gpI links to Rfam database...	0.16	0.21	0.12	13	150869	161	32	61	68	50
CRW_00621	Intron_gpI links to Rfam database...	0.10	0.10	0.10	7	153108	157	13	53	91	64
CRW_00623	Intron_gpI links to Rfam database...	0.30	0.29	0.32	24	129719	123	11	41	71	59
CRW_00626	-	0.61	0.64	0.57	67	100908	69	18	32	19	37
CRW_00629	-	0.55	0.55	0.55	67	91256	57	16	39	2	55
CRW_00633	Intron_gpI links to Rfam database...	0.45	0.44	0.47	47	63445	58	10	44	4	59
CRW_00635	-	0.47	0.45	0.48	62	109150	78	9	57	12	75
CRW_00637	-	0.30	0.30	0.31	48	133746	117	16	93	8	110
CRW_00641	-	0.65	0.66	0.65	50	39826	37	6	21	10	26
CRW_00642	-	0.48	0.52	0.44	34	47201	52	9	34	9	31
CRW_00643	-	0.42	0.45	0.39	55	123114	99	29	58	12	67
CRW_00645	-	0.79	0.84	0.75	56	35436	30	8	11	11	11
CRW_00646	-	0.87	0.84	0.90	54	34920	25	0	6	19	10
CRW_00648	-	0.61	0.64	0.59	94	137915	75	17	49	9	54
CRW_00649	-	0.73	0.74	0.72	92	204352	114	3	33	78	32
CRW_00650	-	0.46	0.46	0.46	65	112909	82	6	70	6	77
CRW_00652	-	0.65	0.67	0.63	87	132217	74	8	43	23	43
CRW_00654	-	0.70	0.68	0.72	84	78094	38	4	28	6	40
CRW_00655	-	0.70	0.69	0.71	86	89132	38	9	26	3	38
CRW_00659	-	0.37	0.41	0.33	25	32310	56	15	35	6	36
CRW_00661	-	0.20	0.22	0.19	11	24251	51	16	32	3	40
CRW_00662	-	0.31	0.31	0.32	20	28618	48	2	40	6	45
CRW_00663	-	0.14	0.15	0.13	9	26039	61	6	52	3	52
CRW_00664	-	0.05	0.05	0.04	4	53536	92	20	68	4	74
CRW_00665	-	0.17	0.19	0.16	9	23596	56	11	37	8	39
CRW_00666	-	0.51	0.52	0.50	65	96011	78	11	54	13	61
CRW_00668	-	0.35	0.37	0.34	56	163711	127	20	91	16	94
CRW_00669	-	0.51	0.50	0.52	59	97348	65	15	39	11	60
CRW_00670	Intron_gpI links to Rfam database...	0.77	0.74	0.81	89	70015	26	0	21	5	31
CRW_00671	Intron_gpI links to Rfam database...	0.66	0.64	0.68	75	62725	41	8	27	6	42
CRW_00672	Intron_gpI links to Rfam database...	0.74	0.73	0.74	81	72281	36	10	18	8	30
CRW_00674	Intron_gpI links to Rfam database...	0.55	0.55	0.55	68	83312	61	8	48	5	56
CRW_00676	Intron_gpI links to Rfam database...	0.54	0.56	0.52	64	93406	75	17	41	17	51
CRW_00677	-	0.53	0.53	0.52	56	71902	60	13	39	8	49
CRW_00679	-	0.22	0.22	0.22	24	76525	94	14	73	7	83
CRW_00681	-	0.46	0.50	0.42	56	112918	93	19	57	17	56
CRW_00685	-	0.38	0.42	0.34	44	156952	121	20	64	37	62
CRW_00687	-	0.68	0.74	0.63	49	28602	34	8	21	5	17
CRW_00689	-	0.70	0.71	0.68	55	33589	29	11	15	3	22
CRW_00690	-	0.65	0.65	0.65	45	33342	32	6	18	8	24
CRW_00691	-	0.53	0.57	0.50	38	27185	41	4	34	3	29
CRW_00692	Intron_gpI links to Rfam database...	0.57	0.57	0.57	51	68545	54	15	24	15	39
CRW_00693	-	0.58	0.57	0.58	70	89133	61	7	43	11	52
CRW_00694	-	0.63	0.63	0.63	77	85782	53	6	40	7	45
CRW_00699	-	0.65	0.61	0.69	77	91694	39	3	32	4	49
CRW_00700	-	0.70	0.70	0.70	103	180753	77	11	34	32	44
CRW_00714	-	0.20	0.22	0.18	24	186222	163	28	81	54	83
CRW_00715	-	0.63	0.60	0.66	62	69284	36	8	24	4	42
CRW_00716	-	0.35	0.35	0.34	31	193663	149	10	49	90	58
CRW_00717	-	0.68	0.66	0.69	98	153593	64	7	37	20	50
CRW_00718	-	0.79	0.75	0.82	144	189860	51	3	29	19	47
CRW_00719	-	0.42	0.43	0.41	39	230086	160	13	43	104	52
CRW_00721	-	0.52	0.60	0.46	41	58563	65	19	30	16	27
CRW_00727	-	0.40	0.48	0.34	56	303644	183	49	61	73	61
CRW_00728	-	0.27	0.30	0.25	36	272545	185	30	80	75	83
CRW_00729	-	0.28	0.32	0.25	39	191113	138	35	84	19	82
CRW_00733	-	0.29	0.35	0.25	38	216657	176	38	78	60	71
CRW_00736	-	0.17	0.19	0.15	25	241689	189	43	103	43	106
CRW_00737	-	0.28	0.36	0.22	41	295876	182	73	75	34	73
CRW_00738	-	0.44	0.47	0.42	64	287509	177	21	67	89	73
CRW_00739	-	0.24	0.27	0.21	36	284465	198	27	107	64	99
CRW_00741	-	0.33	0.39	0.29	52	250099	153	36	91	26	83
CRW_00756	-	0.48	0.50	0.47	86	194817	109	14	83	12	86
CRW_00764	-	0.04	0.05	0.04	9	252909	203	35	163	5	187
CRW_00775	-	0.12	0.13	0.11	28	314576	220	60	157	3	184
CRW_00815	-	0.71	0.72	0.72	113	159737	54	11	34	9	45
CRW_00816	-	0.36	0.36	0.35	47	143781	108	18	70	20	82
CRW_00820	-	0.57	0.58	0.56	84	136352	77	16	51	10	61
PDB_00072	-	0.35	0.35	0.35	73	148033	136	10	124	2	137
PDB_00078	-	0.47	0.45	0.50	52	49665	53	6	47	0	63
PDB_00079	-	0.65	0.62	0.69	88	121643	69	9	31	29	54
PDB_00278	-	0.13	0.13	0.13	9	24907	60	6	54	0	63
PDB_00403	-	0.49	0.50	0.48	76	124590	93	16	68	9	77
PDB_00423	-	0.07	0.07	0.07	5	26723	68	7	61	0	69
PDB_00601	-	0.32	0.32	0.33	25	36240	50	6	44	0	54
PDB_00701	-	0.47	0.46	0.49	50	45348	54	5	48	1	59
PDB_00747	-	0.68	0.61	0.77	49	24467	15	0	15	0	31
PDB_00827	Intron_gpI links to Rfam database...	0.67	0.59	0.76	48	26965	16	0	15	1	33
PDB_00917	-	0.49	0.47	0.51	45	35157	49	4	39	6	50
PDB_00919	RNaseP_bact_a links to Rfam database...	0.50	0.47	0.53	48	44163	45	3	39	3	55
PDB_00985	-	0.23	0.27	0.21	17	30546	66	10	55	1	47
PDB_01129	-	0.27	0.28	0.26	20	35433	64	15	43	6	51
PDB_01144	-	0.26	0.24	0.28	31	82917	88	5	75	8	96
PDB_01157	-	0.26	0.24	0.27	24	49998	64	11	53	0	74
PDB_01166	-	0.42	0.41	0.44	86	181912	115	21	87	7	126
PDB_01193	-	0.42	0.41	0.43	62	105885	92	14	69	9	89
RFA_00597	Telomerase-vert links to Rfam database...	0.51	0.51	0.51	56	97794	82	5	48	29	53
RFA_00599	Telomerase-vert links to Rfam database...	0.67	0.70	0.64	78	101353	66	16	28	22	33
RFA_00601	Telomerase-vert links to Rfam database...	0.09	0.11	0.08	12	99092	139	35	96	8	102
RFA_00602	Telomerase-vert links to Rfam database...	0.50	0.53	0.47	62	101344	91	18	51	22	54
RFA_00606	Telomerase-cil links to Rfam database...	0.67	0.67	0.68	26	21283	26	7	5	14	13
RFA_00620	Telomerase-cil links to Rfam database...	0.64	0.62	0.67	24	21909	26	3	9	14	15
RFA_00621	RNase_MRP links to Rfam database...	0.39	0.39	0.38	30	46281	63	7	42	14	46
RFA_00623	RNase_MRP links to Rfam database...	0.46	0.45	0.47	35	43881	54	5	35	14	43
RFA_00624	RNase_MRP links to Rfam database...	0.43	0.46	0.41	28	30067	45	5	35	5	33
RFA_00626	rne5 links to Rfam database...	0.89	0.86	0.93	75	56535	31	2	4	25	12
RFA_00627	rne5 links to Rfam database...	0.48	0.47	0.48	41	56868	50	10	34	6	46
RFA_00628	rne5 links to Rfam database...	0.83	0.80	0.85	69	57210	38	1	11	26	17
RFA_00630	rne5 links to Rfam database...	0.60	0.60	0.60	52	56866	46	8	27	11	35
RFA_00639	7SK links to Rfam database...	0.49	0.49	0.49	43	54528	61	8	36	17	44
RFA_00814	R2_retro_el links to Rfam database...	0.35	0.37	0.33	15	25155	42	7	23	12	26
RFA_00815	R2_retro_el links to Rfam database...	0.56	0.61	0.51	25	24482	35	8	16	11	16
RFA_00816	R2_retro_el links to Rfam database...	0.59	0.66	0.53	27	23169	33	13	11	9	14
RFA_00818	R2_retro_el links to Rfam database...	0.19	0.22	0.17	9	20247	48	19	26	3	32
RFA_00819	R2_retro_el links to Rfam database...	0.96	0.95	0.98	39	27926	32	0	1	31	2
RFA_00820	bicoid_3 links to Rfam database...	0.90	0.91	0.88	145	151361	34	1	18	15	15
RFA_00830	bicoid_3 links to Rfam database...	0.50	0.47	0.53	73	152490	110	5	60	45	81
SRP_00002	Metazoa_SRP links to Rfam database...	0.81	0.79	0.82	81	45051	20	4	14	2	21
SRP_00006	Metazoa_SRP links to Rfam database...	0.82	0.81	0.84	82	45655	19	3	13	3	19
SRP_00011	Plant_SRP links to Rfam database...	0.43	0.42	0.45	44	46262	54	4	50	0	60
SRP_00015	Plant_SRP links to Rfam database...	0.54	0.53	0.55	52	46265	48	8	35	5	47
SRP_00016	Archaea_SRP links to Rfam database...	0.92	0.89	0.94	97	47792	8	0	6	2	12
SRP_00018	Fungi_SRP links to Rfam database...	0.71	0.68	0.73	55	38428	33	1	19	13	26
SRP_00019	Fungi_SRP links to Rfam database...	0.91	0.89	0.93	81	35959	12	4	2	6	10
SRP_00023	-	0.05	0.06	0.04	2	20865	47	9	34	4	33
SRP_00024	Bacteria_large_SRP links to Rfam database...	0.68	0.70	0.67	61	37584	31	4	26	1	26
SRP_00026	Bacteria_large_SRP links to Rfam database...	0.58	0.59	0.58	52	36766	46	4	34	8	36
SRP_00027	Bacteria_large_SRP links to Rfam database...	0.64	0.62	0.67	54	37047	28	3	24	1	33
SRP_00030	Bacteria_large_SRP links to Rfam database...	0.74	0.75	0.73	66	36766	26	4	20	2	22
SRP_00031	Bacteria_large_SRP links to Rfam database...	0.64	0.64	0.63	57	36225	37	4	29	4	32
SRP_00037	Bacteria_large_SRP links to Rfam database...	0.60	0.60	0.60	52	36498	37	4	31	2	35
SRP_00060	Metazoa_SRP links to Rfam database...	0.94	0.93	0.96	93	44454	10	0	4	6	7
SRP_00061	Metazoa_SRP links to Rfam database...	0.94	0.93	0.95	93	44752	12	0	5	7	7
SRP_00069	Fungi_SRP links to Rfam database...	0.57	0.55	0.59	47	34374	34	1	31	2	38
SRP_00070	Fungi_SRP links to Rfam database...	0.28	0.32	0.25	39	126599	128	30	88	10	82
SRP_00073	Fungi_SRP links to Rfam database...	0.65	0.70	0.60	50	38977	46	8	25	13	21
SRP_00076	-	0.00	0.00	0.00	0	25358	80	15	52	13	39
SRP_00079	Plant_SRP links to Rfam database...	0.52	0.55	0.50	48	41809	53	8	40	5	40
SRP_00085	Plant_SRP links to Rfam database...	0.64	0.63	0.65	64	45352	37	5	30	2	37
SRP_00086	Metazoa_SRP links to Rfam database...	0.71	0.71	0.70	71	44152	31	3	27	1	29
SRP_00087	Fungi_SRP links to Rfam database...	0.24	0.28	0.21	16	37323	71	20	42	9	42
SRP_00088	Bacteria_large_SRP links to Rfam database...	0.67	0.69	0.66	61	34098	32	3	29	0	28
SRP_00089	Bacteria_large_SRP links to Rfam database...	0.82	0.81	0.84	73	35691	14	1	13	0	17
SRP_00090	Bacteria_large_SRP links to Rfam database...	0.69	0.66	0.72	59	35429	25	1	22	2	31
SRP_00091	Fungi_SRP links to Rfam database...	0.80	0.82	0.79	78	52876	26	4	17	5	17
SRP_00099	Plant_SRP links to Rfam database...	0.57	0.57	0.57	54	44755	43	5	36	2	41
SRP_00104	Fungi_SRP links to Rfam database...	0.41	0.46	0.36	32	34365	59	12	44	3	37
SRP_00108	-	0.65	0.70	0.61	49	38423	38	8	23	7	21
SRP_00117	Metazoa_SRP links to Rfam database...	0.63	0.62	0.64	63	45352	39	1	35	3	39
SRP_00118	-	0.86	0.85	0.87	81	39247	12	1	11	0	14
SRP_00120	-	0.58	0.53	0.62	46	37327	29	4	24	1	40
SRP_00124	Metazoa_SRP links to Rfam database...	0.53	0.52	0.55	44	37048	38	5	31	2	41
SRP_00127	Fungi_SRP links to Rfam database...	0.61	0.61	0.60	73	72268	55	8	41	6	46
SRP_00130	Archaea_SRP links to Rfam database...	0.24	0.24	0.24	23	49676	72	10	61	1	74
SRP_00136	Fungi_SRP links to Rfam database...	0.35	0.39	0.31	28	44163	69	13	49	7	43
SRP_00142	Archaea_SRP links to Rfam database...	0.57	0.58	0.57	54	45961	43	5	36	2	39
SRP_00143	Archaea_SRP links to Rfam database...	0.36	0.38	0.35	38	49662	72	8	62	2	63
SRP_00144	Archaea_SRP links to Rfam database...	0.74	0.74	0.74	70	46571	31	1	23	7	24
SRP_00148	Fungi_SRP links to Rfam database...	0.31	0.33	0.29	29	49987	81	4	66	11	58
SRP_00152	Plant_SRP links to Rfam database...	0.56	0.56	0.57	58	45651	45	1	43	1	45
SRP_00157	Fungi_SRP links to Rfam database...	0.37	0.40	0.34	29	44167	65	15	42	8	43
SRP_00158	Fungi_SRP links to Rfam database...	0.30	0.37	0.25	42	124084	130	48	77	5	73
SRP_00160	Fungi_SRP links to Rfam database...	0.41	0.41	0.42	53	86194	74	4	69	1	77
SRP_00167	-	0.30	0.31	0.30	26	38694	66	6	55	5	58
SRP_00171	Metazoa_SRP links to Rfam database...	0.00	0.00	0.00	0	45348	103	15	88	0	88
SRP_00172	-	0.36	0.36	0.36	33	38968	60	5	54	1	58
SRP_00173	Bacteria_large_SRP links to Rfam database...	0.72	0.70	0.75	63	38142	29	1	20	8	27
SRP_00174	Bacteria_large_SRP links to Rfam database...	0.74	0.76	0.72	65	38691	29	8	17	4	21
SRP_00175	Fungi_SRP links to Rfam database...	0.51	0.52	0.49	44	44461	52	7	39	6	40
SRP_00178	Plant_SRP links to Rfam database...	0.83	0.78	0.87	80	45661	14	1	11	2	22
SRP_00180	-	0.71	0.72	0.70	39	22522	30	4	13	13	15
SRP_00181	Plant_SRP links to Rfam database...	0.33	0.31	0.35	32	45964	60	1	59	0	70
SRP_00182	Plant_SRP links to Rfam database...	0.76	0.73	0.79	74	45962	21	3	17	1	27
SRP_00184	Plant_SRP links to Rfam database...	0.62	0.60	0.64	60	45962	39	2	32	5	40
SRP_00197	Archaea_SRP links to Rfam database...	0.24	0.24	0.25	24	49359	72	7	65	0	77
SRP_00199	Archaea_SRP links to Rfam database...	0.67	0.66	0.68	69	50939	34	2	30	2	36
SRP_00201	Archaea_SRP links to Rfam database...	0.84	0.84	0.84	93	47784	20	5	13	2	18
SRP_00202	Archaea_SRP links to Rfam database...	0.95	0.93	0.96	109	54172	6	0	4	2	8
SRP_00203	Archaea_SRP links to Rfam database...	0.73	0.75	0.72	79	48718	37	3	28	6	26
SRP_00204	Archaea_SRP links to Rfam database...	0.68	0.68	0.69	69	49041	33	4	27	2	33
SRP_00206	Archaea_SRP links to Rfam database...	0.84	0.83	0.84	90	47788	18	5	12	1	18
SRP_00208	Archaea_SRP links to Rfam database...	0.83	0.82	0.85	83	46567	18	2	13	3	18
SRP_00230	Fungi_SRP links to Rfam database...	0.80	0.81	0.79	73	39529	23	3	16	4	17
SRP_00234	Bacteria_large_SRP links to Rfam database...	0.77	0.77	0.78	66	36230	25	1	18	6	20
SRP_00241	Plant_SRP links to Rfam database...	0.54	0.59	0.51	48	45961	50	11	36	3	34
SRP_00252	Metazoa_SRP links to Rfam database...	0.62	0.64	0.59	57	49045	42	12	27	3	32
SRP_00253	Metazoa_SRP links to Rfam database...	0.61	0.63	0.59	57	49359	44	7	32	5	33
SRP_00254	Fungi_SRP links to Rfam database...	0.43	0.48	0.39	29	32311	50	13	32	5	32
SRP_00257	Metazoa_SRP links to Rfam database...	0.85	0.87	0.84	94	50928	20	4	14	2	14
SRP_00261	-	0.79	0.79	0.80	82	45348	22	3	18	1	22
SRP_00263	-	0.75	0.77	0.74	80	48408	28	10	18	0	24
SRP_00265	Fungi_SRP links to Rfam database...	0.56	0.62	0.52	45	41241	55	9	33	13	28
SRP_00267	Metazoa_SRP links to Rfam database...	0.87	0.88	0.87	84	44454	19	0	13	6	12
SRP_00276	Archaea_SRP links to Rfam database...	0.86	0.85	0.86	94	50612	16	5	10	1	16
SRP_00278	Archaea_SRP links to Rfam database...	0.72	0.72	0.71	76	45949	33	4	27	2	29
SRP_00282	Metazoa_SRP links to Rfam database...	0.32	0.37	0.28	23	43284	67	19	39	9	40
SRP_00286	Fungi_SRP links to Rfam database...	0.57	0.56	0.59	97	136861	77	4	64	9	77
SRP_00287	Fungi_SRP links to Rfam database...	0.64	0.65	0.64	105	141613	74	8	52	14	57
SRP_00290	Fungi_SRP links to Rfam database...	0.66	0.66	0.65	89	100440	57	2	45	10	46
SRP_00292	Fungi_SRP links to Rfam database...	0.58	0.55	0.61	96	137392	69	2	60	7	77
SRP_00294	Fungi_SRP links to Rfam database...	0.61	0.59	0.62	99	129126	67	4	57	6	68
SRP_00299	Metazoa_SRP links to Rfam database...	0.68	0.68	0.68	67	44155	32	3	28	1	32
SRP_00301	Fungi_SRP links to Rfam database...	0.85	0.85	0.86	73	32555	18	1	11	6	13
SRP_00302	Fungi_SRP links to Rfam database...	0.39	0.40	0.39	32	41533	61	7	44	10	49
SRP_00308	Bacteria_large_SRP links to Rfam database...	0.55	0.55	0.56	48	36229	42	9	29	4	40
SRP_00317	Metazoa_SRP links to Rfam database...	0.93	0.89	0.98	87	45061	10	0	2	8	11
SRP_00321	Archaea_SRP links to Rfam database...	0.77	0.77	0.78	83	47479	27	3	21	3	25
SRP_00322	Archaea_SRP links to Rfam database...	0.60	0.60	0.61	65	48409	43	2	40	1	44
SRP_00323	Archaea_SRP links to Rfam database...	0.90	0.89	0.90	95	47173	14	0	10	4	12
SRP_00330	Archaea_SRP links to Rfam database...	0.44	0.44	0.45	42	49992	54	2	50	2	53
SRP_00332	Archaea_SRP links to Rfam database...	0.90	0.90	0.91	95	50299	15	1	8	6	11
SRP_00335	Bacteria_large_SRP links to Rfam database...	0.32	0.44	0.24	17	35173	76	26	29	21	22
SRP_00336	-	0.18	0.19	0.17	15	38970	76	11	64	1	62
SRP_00337	Bacteria_large_SRP links to Rfam database...	0.73	0.71	0.76	65	35425	23	1	20	2	26
SRP_00339	Archaea_SRP links to Rfam database...	0.56	0.56	0.56	53	44456	45	5	37	3	41
SRP_00340	Metazoa_SRP links to Rfam database...	0.55	0.59	0.52	48	41235	47	9	36	2	34
SRP_00345	-	0.28	0.31	0.26	16	20645	51	12	33	6	36
SRP_00347	Metazoa_SRP links to Rfam database...	0.82	0.80	0.84	77	46573	21	3	12	6	19
SRP_00348	-	0.49	0.47	0.52	46	46883	42	4	38	0	52
SRP_00353	-	0.86	0.83	0.90	83	37858	10	0	9	1	17
SRP_00354	-	0.76	0.75	0.76	70	38689	25	0	22	3	23
SRP_00355	-	0.84	0.83	0.85	80	41811	19	2	12	5	16
SRP_00361	Plant_SRP links to Rfam database...	0.71	0.71	0.70	64	41814	37	3	24	10	26
SRP_00371	Fungi_SRP links to Rfam database...	0.53	0.54	0.52	44	36231	43	3	37	3	38
SRP_00382	Fungi_SRP links to Rfam database...	0.58	0.57	0.58	97	141612	80	6	63	11	73
TMR_00038	tmRNA links to Rfam database...	0.25	0.25	0.25	28	71140	89	12	73	4	82
TMR_00046	tmRNA links to Rfam database...	0.47	0.48	0.46	46	62734	61	10	45	6	50
TMR_00047	tmRNA links to Rfam database...	0.25	0.30	0.22	17	48438	76	16	45	15	40
TMR_00048	tmRNA links to Rfam database...	0.35	0.37	0.34	35	64876	73	9	60	4	60
TMR_00049	tmRNA links to Rfam database...	0.50	0.52	0.49	45	63098	59	9	38	12	42
TMR_00051	tmRNA links to Rfam database...	0.54	0.51	0.57	48	65619	56	2	34	20	46
TMR_00055	tmRNA links to Rfam database...	0.06	0.07	0.06	8	78870	125	25	100	0	106
TMR_00064	tmRNA links to Rfam database...	0.38	0.38	0.38	39	76925	72	19	45	8	64
TMR_00073	tmRNA links to Rfam database...	0.40	0.39	0.40	46	65588	70	7	62	1	71
TMR_00076	tmRNA links to Rfam database...	0.26	0.27	0.25	27	70768	87	15	66	6	73
TMR_00106	tmRNA links to Rfam database...	0.35	0.37	0.34	44	89969	91	20	67	4	76
TMR_00144	tmRNA links to Rfam database...	0.20	0.21	0.19	22	74189	96	15	79	2	81
TMR_00150	tmRNA links to Rfam database...	0.64	0.64	0.64	27	43029	50	2	13	35	15
TMR_00179	tmRNA links to Rfam database...	0.31	0.33	0.29	32	67050	85	14	65	6	66
TMR_00199	tmRNA links to Rfam database...	0.48	0.49	0.47	45	62740	57	21	29	7	47
TMR_00223	tmRNA links to Rfam database...	0.19	0.20	0.18	19	64158	88	22	62	4	76
TMR_00238	tmRNA links to Rfam database...	0.14	0.15	0.13	15	84553	106	15	83	8	86
TMR_00239	tmRNA links to Rfam database...	0.47	0.48	0.46	46	61676	57	11	43	3	50
TMR_00246	-	0.49	0.56	0.43	19	78166	109	5	20	84	15
TMR_00274	tmRNA links to Rfam database...	0.31	0.32	0.31	34	66684	83	11	66	6	71
TMR_00279	tmRNA links to Rfam database...	0.50	0.51	0.49	48	68908	60	10	40	10	46
TMR_00283	tmRNA links to Rfam database...	0.39	0.42	0.37	40	65233	71	19	49	3	56
TMR_00310	tmRNA links to Rfam database...	0.56	0.56	0.56	55	63805	48	9	34	5	43
TMR_00317	tmRNA links to Rfam database...	0.56	0.57	0.55	58	68160	50	14	33	3	44
TMR_00352	tmRNA links to Rfam database...	0.42	0.45	0.39	34	95179	91	17	36	38	41
TMR_00409	tmRNA links to Rfam database...	0.65	0.70	0.60	32	68582	75	7	14	54	14
TMR_00411	tmRNA links to Rfam database...	0.18	0.18	0.17	16	60983	83	14	62	7	71
TMR_00415	tmRNA links to Rfam database...	0.26	0.26	0.25	26	67059	76	13	63	0	75
TMR_00419	tmRNA links to Rfam database...	0.39	0.39	0.40	43	81703	83	10	54	19	68
TMR_00422	tmRNA links to Rfam database...	0.46	0.49	0.44	45	67793	67	14	44	9	47
TMR_00458	tmRNA links to Rfam database...	0.22	0.22	0.23	20	63458	76	7	61	8	73
TMR_00478	tmRNA links to Rfam database...	0.12	0.13	0.12	13	71900	100	29	68	3	86
TMR_00553	tmRNA links to Rfam database...	0.39	0.38	0.39	31	48126	54	7	41	6	50
TMR_00560	tmRNA links to Rfam database...	0.41	0.42	0.41	41	60975	67	6	53	8	57
TMR_00568	tmRNA links to Rfam database...	0.57	0.57	0.58	56	60629	50	3	38	9	43
TMR_00579	tmRNA links to Rfam database...	0.22	0.26	0.20	23	80485	102	21	72	9	67
TMR_00581	tmRNA links to Rfam database...	0.14	0.14	0.13	14	62376	98	9	82	7	84
TMR_00587	tmRNA links to Rfam database...	0.69	0.68	0.71	68	61329	33	4	24	5	32
TMR_00588	tmRNA links to Rfam database...	0.24	0.25	0.23	25	77311	94	24	61	9	76
TMR_00594	tmRNA links to Rfam database...	0.20	0.20	0.20	21	79294	90	15	71	4	83
TMR_00596	tmRNA links to Rfam database...	0.14	0.15	0.14	14	78107	99	16	73	10	81
TMR_00600	tmRNA links to Rfam database...	0.14	0.14	0.14	16	79684	100	18	82	0	99
TMR_00603	tmRNA links to Rfam database...	0.54	0.56	0.52	24	60332	82	7	15	60	19
TMR_00606	tmRNA links to Rfam database...	0.37	0.36	0.37	39	68900	77	5	62	10	68
TMR_00625	tmRNA links to Rfam database...	0.20	0.21	0.19	22	78889	96	28	64	4	84
TMR_00706	tmRNA links to Rfam database...	0.50	0.50	0.50	51	66328	55	6	45	4	52
TMR_00712	tmRNA links to Rfam database...	0.18	0.18	0.18	20	78497	101	14	75	12	89

^top

Matthews Correlation Coeffient, Sensitivity and Positive Predictive Value have been calculated based on the paper by Gardener & Giegerich, 2004.

Table of contents:

Overview

Performance plots

Performance of Sfold - scored higher in this pairwise comparison

1. Total counts & total scores for Sfold

2. Individual counts for Sfold [ download as .csv ]

Performance of Afold - scored lower in this pairwise comparison

1. Total counts & total scores for Afold

2. Individual counts for Afold [ download as .csv ]