CompaRNA - on-line benchmarks of RNA structure prediction methods

Laboratory of Structural Bioinformatics @ Adam Mickiewicz University in Poznan

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Overview

Metric	UNAFold		RNAsubopt
MCC	0.510	>	0.501
Average MCC ± 95% Confidence Intervals	0.510 ± 0.014	>	0.502 ± 0.014
Sensitivity	0.507	<	0.510
Positive Predictive Value	0.514	>	0.495
Total TP	37373	<	37548
Total TN	44927850	>	44924659
Total FP	40614	<	44042
Total FP CONTRA	6234	<	6717
Total FP INCONS	29117	<	31650
Total FP COMP	5263	<	5675
Total FN	36321	>	36146
P-value	3.56938820447e-08

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Performance plots

Comparison of performance of UNAFold and RNAsubopt. Positive Predictive Value (PPV) is plotted against sensitivity. Each dot represents a single test of each method. See tables below for raw data (individual counts for UNAFold and RNAsubopt).
Average Matthews Correlation Coefficients (MCC) with 95% confidence intervals (CIs) were plotted for different RNA families, for which at least 3 members were present in the benchmarking dataset. 'n' denotes the number of MCCs used to calculate the average and CI. See tables below for raw data (individual counts for UNAFold and RNAsubopt).
Comparison of average Matthews Correlation Coefficients (MCCs) for UNAFold and RNAsubopt. The whiskers correspond to 95% confidence intervals (CIs). 'n' denotes the number of MCCs used to calculate average MCCs and CIs. See tables below for raw data (individual counts for UNAFold and RNAsubopt).

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Performance of UNAFold - scored higher in this pairwise comparison

1. Total counts & total scores for UNAFold

Total Base Pair Counts
Total TP	37373
Total TN	44927850
Total FP	40614
Total FP CONTRA	6234
Total FP INCONS	29117
Total FP COMP	5263
Total FN	36321

Total Scores
MCC	0.510
Average MCC ± 95% Confidence Intervals	0.510 ± 0.014
Sensitivity	0.507
Positive Predictive Value	0.514
Nr of predictions	759

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2. Individual counts for UNAFold [ download as .csv ]

RNA Chain	Rfam family	MCC	SENS	PPV	TP	TN	FP	FP CONTRA	FP INCONS	FP COMP	FN
ASE_00001	RNaseP_arch links to Rfam database...	0.63	0.61	0.66	46	34121	30	2	22	6	29
ASE_00002	RNaseP_arch links to Rfam database...	0.66	0.62	0.70	45	35447	24	3	16	5	28
ASE_00004	RNaseP_bact_a links to Rfam database...	0.71	0.70	0.72	68	47800	29	9	18	2	29
ASE_00005	RNaseP_bact_a links to Rfam database...	0.60	0.54	0.67	63	57876	35	1	30	4	54
ASE_00006	RNaseP_bact_a links to Rfam database...	0.67	0.66	0.68	61	47496	32	7	22	3	32
ASE_00007	RNaseP_bact_a links to Rfam database...	0.57	0.54	0.60	59	59587	43	1	38	4	51
ASE_00009	RNaseP_arch links to Rfam database...	0.78	0.75	0.81	50	26044	15	0	12	3	17
ASE_00010	RNaseP_bact_b links to Rfam database...	0.50	0.51	0.48	42	49683	51	11	34	6	40
ASE_00012	RNaseP_bact_a links to Rfam database...	0.52	0.48	0.56	59	73814	52	4	43	5	64
ASE_00014	RNaseP_arch links to Rfam database...	0.24	0.25	0.24	26	54178	82	8	73	1	80
ASE_00016	-	0.60	0.62	0.58	38	66001	85	3	24	58	23
ASE_00017	RNaseP_nuc links to Rfam database...	0.26	0.28	0.24	18	50966	75	6	50	19	46
ASE_00018	RNaseP_bact_a links to Rfam database...	0.78	0.73	0.84	98	80484	21	4	15	2	36
ASE_00020	RNaseP_bact_a links to Rfam database...	0.57	0.54	0.60	68	73806	46	7	39	0	58
ASE_00021	RNaseP_bact_a links to Rfam database...	0.58	0.54	0.62	86	104057	60	7	46	7	74
ASE_00022	RNaseP_bact_b links to Rfam database...	0.46	0.45	0.48	56	82911	67	6	55	6	68
ASE_00023	RNaseP_bact_a links to Rfam database...	0.64	0.64	0.64	81	84129	48	5	40	3	46
ASE_00024	-	0.80	0.76	0.84	53	29340	18	3	7	8	17
ASE_00025	RNaseP_nuc links to Rfam database...	0.22	0.24	0.21	17	78526	115	12	51	52	54
ASE_00026	RNaseP_bact_a links to Rfam database...	0.53	0.51	0.54	56	59582	55	1	46	8	54
ASE_00028	RNaseP_bact_b links to Rfam database...	0.56	0.55	0.57	69	84545	60	8	44	8	57
ASE_00029	RNaseP_bact_a links to Rfam database...	0.37	0.36	0.38	44	82913	73	12	59	2	78
ASE_00030	RNaseP_bact_a links to Rfam database...	0.60	0.58	0.63	84	85357	50	5	45	0	61
ASE_00031	RNaseP_bact_a links to Rfam database...	0.60	0.58	0.61	73	86617	56	4	42	10	53
ASE_00032	RNaseP_bact_a links to Rfam database...	0.56	0.53	0.58	63	80092	50	3	42	5	55
ASE_00033	RNaseP_bact_a links to Rfam database...	0.58	0.52	0.65	63	64883	37	2	32	3	58
ASE_00035	RNaseP_bact_a links to Rfam database...	0.30	0.28	0.32	33	70398	76	12	57	7	85
ASE_00036	RNaseP_bact_a links to Rfam database...	0.43	0.41	0.45	54	75734	70	8	59	3	78
ASE_00037	RNaseP_bact_a links to Rfam database...	0.63	0.59	0.66	65	59242	37	0	33	4	45
ASE_00038	RNaseP_bact_a links to Rfam database...	0.54	0.53	0.54	54	53528	47	4	42	1	47
ASE_00040	RNaseP_bact_a links to Rfam database...	0.48	0.46	0.50	61	78882	66	5	55	6	72
ASE_00041	RNaseP_bact_a links to Rfam database...	0.44	0.41	0.47	44	57537	53	2	47	4	64
ASE_00042	RNaseP_bact_a links to Rfam database...	0.61	0.57	0.64	83	89971	49	2	44	3	62
ASE_00044	RNaseP_bact_a links to Rfam database...	0.69	0.68	0.70	71	54514	34	3	27	4	34
ASE_00045	RNaseP_bact_b links to Rfam database...	0.67	0.66	0.67	53	47199	34	7	19	8	27
ASE_00046	RNaseP_bact_a links to Rfam database...	0.57	0.51	0.64	53	50320	30	5	25	0	50
ASE_00047	RNaseP_bact_a links to Rfam database...	0.33	0.32	0.35	41	74189	76	4	71	1	89
ASE_00052	RNaseP_bact_a links to Rfam database...	0.51	0.47	0.55	53	61329	48	2	41	5	59
ASE_00053	RNaseP_bact_a links to Rfam database...	0.56	0.54	0.57	72	79275	57	5	49	3	61
ASE_00056	-	0.38	0.36	0.41	26	30812	48	4	34	10	46
ASE_00057	RNaseP_bact_a links to Rfam database...	0.63	0.60	0.65	81	82090	49	8	36	5	53
ASE_00064	RNaseP_bact_a links to Rfam database...	0.32	0.31	0.32	28	45363	69	4	56	9	61
ASE_00066	RNaseP_bact_a links to Rfam database...	0.68	0.64	0.73	83	72277	31	4	26	1	47
ASE_00068	RNaseP_bact_a links to Rfam database...	0.52	0.49	0.55	42	37598	35	4	31	0	43
ASE_00069	RNaseP_bact_a links to Rfam database...	0.66	0.64	0.68	90	82896	45	5	37	3	50
ASE_00074	RNaseP_bact_a links to Rfam database...	0.58	0.57	0.60	68	67782	46	5	41	0	51
ASE_00075	RNaseP_bact_a links to Rfam database...	0.61	0.56	0.68	90	108678	47	3	40	4	72
ASE_00076	RNaseP_bact_a links to Rfam database...	0.55	0.52	0.59	61	68161	46	4	39	3	57
ASE_00077	RNaseP_bact_a links to Rfam database...	0.52	0.51	0.54	44	45068	38	7	31	0	42
ASE_00078	RNaseP_bact_a links to Rfam database...	0.65	0.63	0.68	52	42994	31	0	25	6	31
ASE_00079	RNaseP_bact_a links to Rfam database...	0.54	0.52	0.57	52	55519	40	4	36	0	48
ASE_00080	RNaseP_bact_a links to Rfam database...	0.47	0.45	0.49	55	71519	60	5	52	3	68
ASE_00081	RNaseP_bact_a links to Rfam database...	0.56	0.54	0.58	52	49680	39	2	36	1	45
ASE_00082	RNaseP_bact_a links to Rfam database...	0.55	0.51	0.59	59	70400	55	1	40	14	57
ASE_00083	RNaseP_bact_a links to Rfam database...	0.79	0.75	0.83	82	62382	24	2	15	7	28
ASE_00084	RNaseP_bact_a links to Rfam database...	0.69	0.69	0.70	68	53531	32	6	23	3	31
ASE_00087	RNaseP_bact_a links to Rfam database...	0.59	0.54	0.64	78	88288	49	5	39	5	66
ASE_00089	-	0.65	0.58	0.72	46	31311	21	0	18	3	33
ASE_00090	RNaseP_bact_a links to Rfam database...	0.59	0.59	0.59	60	55509	47	2	40	5	41
ASE_00092	RNaseP_bact_a links to Rfam database...	0.69	0.65	0.73	74	63444	33	5	23	5	39
ASE_00096	RNaseP_bact_a links to Rfam database...	0.56	0.54	0.59	62	63441	43	4	39	0	53
ASE_00099	RNaseP_bact_a links to Rfam database...	0.51	0.50	0.53	60	64506	56	6	48	2	60
ASE_00100	RNaseP_nuc links to Rfam database...	0.21	0.22	0.19	17	82126	113	16	56	41	59
ASE_00102	RNaseP_bact_a links to Rfam database...	0.43	0.41	0.45	68	117703	87	8	76	3	98
ASE_00104	RNaseP_bact_a links to Rfam database...	0.70	0.67	0.73	80	64151	31	5	25	1	39
ASE_00105	RNaseP_bact_a links to Rfam database...	0.36	0.34	0.38	38	64161	64	6	56	2	73
ASE_00107	RNaseP_bact_a links to Rfam database...	0.66	0.65	0.67	82	73031	40	5	35	0	45
ASE_00108	RNaseP_nuc links to Rfam database...	0.24	0.29	0.20	18	46883	81	21	49	11	45
ASE_00111	RNaseP_nuc links to Rfam database...	0.25	0.32	0.20	18	49997	80	31	40	9	39
ASE_00112	RNaseP_bact_a links to Rfam database...	0.78	0.74	0.83	86	75362	24	5	13	6	30
ASE_00114	RNaseP_bact_b links to Rfam database...	0.49	0.49	0.49	38	45374	45	6	33	6	39
ASE_00115	RNaseP_bact_a links to Rfam database...	0.49	0.48	0.51	48	54521	53	1	45	7	53
ASE_00116	RNaseP_arch links to Rfam database...	0.20	0.20	0.20	13	31561	55	2	50	3	53
ASE_00118	RNaseP_bact_a links to Rfam database...	0.58	0.56	0.59	57	60630	42	3	36	3	45
ASE_00119	RNaseP_bact_a links to Rfam database...	0.67	0.65	0.69	70	62734	33	1	30	2	38
ASE_00120	RNaseP_arch links to Rfam database...	0.51	0.49	0.53	46	46885	42	8	32	2	48
ASE_00121	RNaseP_arch links to Rfam database...	0.24	0.24	0.24	22	45060	68	5	63	0	70
ASE_00122	RNaseP_bact_a links to Rfam database...	0.47	0.45	0.48	40	43282	43	2	41	0	48
ASE_00123	RNaseP_bact_a links to Rfam database...	0.28	0.27	0.29	23	38425	59	3	52	4	62
ASE_00125	RNaseP_bact_a links to Rfam database...	0.64	0.63	0.65	55	39255	30	4	26	0	33
ASE_00126	RNaseP_bact_a links to Rfam database...	0.75	0.77	0.74	63	40385	26	3	19	4	19
ASE_00128	RNaseP_bact_a links to Rfam database...	0.65	0.62	0.69	62	53211	36	3	25	8	38
ASE_00129	RNaseP_bact_a links to Rfam database...	0.52	0.50	0.53	56	62730	53	5	44	4	55
ASE_00131	RNaseP_bact_a links to Rfam database...	0.61	0.55	0.68	47	39271	32	0	22	10	38
ASE_00132	RNaseP_bact_a links to Rfam database...	0.66	0.63	0.68	60	50315	30	4	24	2	35
ASE_00134	RNaseP_bact_a links to Rfam database...	0.41	0.42	0.40	40	50302	64	10	51	3	55
ASE_00135	RNaseP_bact_a links to Rfam database...	0.46	0.45	0.47	49	63085	59	8	48	3	60
ASE_00136	RNaseP_bact_a links to Rfam database...	0.56	0.52	0.60	48	48125	41	1	31	9	44
ASE_00137	RNaseP_bact_a links to Rfam database...	0.67	0.65	0.68	64	48422	32	4	26	2	34
ASE_00138	RNaseP_bact_a links to Rfam database...	0.53	0.52	0.55	42	40393	35	4	31	0	39
ASE_00139	RNaseP_bact_a links to Rfam database...	0.35	0.33	0.38	34	54196	58	4	51	3	70
ASE_00140	RNaseP_bact_a links to Rfam database...	0.72	0.67	0.77	84	70767	27	4	21	2	41
ASE_00142	RNaseP_bact_a links to Rfam database...	0.74	0.70	0.79	85	67054	26	4	18	4	37
ASE_00144	-	0.37	0.38	0.36	37	58208	66	12	54	0	60
ASE_00145	RNaseP_arch links to Rfam database...	0.46	0.45	0.48	50	70021	59	7	47	5	61
ASE_00146	RNaseP_bact_a links to Rfam database...	0.55	0.52	0.60	64	70769	49	2	41	6	60
ASE_00148	RNaseP_arch links to Rfam database...	0.69	0.67	0.72	103	112431	44	4	37	3	51
ASE_00151	RNaseP_bact_a links to Rfam database...	0.29	0.28	0.31	27	51915	61	7	54	0	71
ASE_00153	RNaseP_nuc links to Rfam database...	0.67	0.68	0.66	50	57554	68	2	24	42	23
ASE_00154	RNaseP_arch links to Rfam database...	0.64	0.63	0.65	67	65238	39	4	32	3	40
ASE_00155	RNaseP_arch links to Rfam database...	0.62	0.61	0.63	86	93392	57	8	42	7	56
ASE_00159	-	0.64	0.59	0.69	36	34928	45	0	16	29	25
ASE_00160	-	0.82	0.80	0.83	40	23823	25	0	8	17	10
ASE_00161	RNaseP_bact_b links to Rfam database...	0.34	0.36	0.33	31	53533	68	10	54	4	56
ASE_00163	RNaseP_bact_a links to Rfam database...	0.60	0.59	0.62	55	53212	45	2	32	11	38
ASE_00165	RNaseP_bact_a links to Rfam database...	0.54	0.52	0.56	53	52881	42	5	36	1	48
ASE_00168	RNaseP_nuc links to Rfam database...	0.31	0.38	0.25	24	60631	84	28	43	13	40
ASE_00169	RNaseP_bact_a links to Rfam database...	0.51	0.49	0.54	52	57194	49	7	38	4	55
ASE_00170	RNaseP_bact_a links to Rfam database...	0.70	0.68	0.72	63	48740	26	2	23	1	30
ASE_00171	RNaseP_bact_a links to Rfam database...	0.70	0.69	0.71	65	48425	26	5	21	0	29
ASE_00172	RNaseP_bact_a links to Rfam database...	0.69	0.68	0.70	72	58893	36	6	25	5	34
ASE_00174	RNaseP_bact_a links to Rfam database...	0.52	0.51	0.53	56	60970	50	6	43	1	53
ASE_00175	RNaseP_bact_a links to Rfam database...	0.73	0.70	0.76	75	59932	31	2	22	7	32
ASE_00176	RNaseP_bact_a links to Rfam database...	0.61	0.58	0.64	64	59931	39	6	30	3	46
ASE_00179	RNaseP_bact_a links to Rfam database...	0.65	0.65	0.64	55	44167	31	6	25	0	29
ASE_00180	RNaseP_bact_a links to Rfam database...	0.65	0.62	0.69	62	51270	33	2	26	5	38
ASE_00181	RNaseP_bact_a links to Rfam database...	0.54	0.53	0.55	56	57528	50	3	43	4	50
ASE_00182	RNaseP_bact_a links to Rfam database...	0.53	0.51	0.55	69	84130	59	6	50	3	67
ASE_00183	RNaseP_bact_a links to Rfam database...	0.72	0.71	0.73	80	61316	33	2	27	4	33
ASE_00184	RNaseP_bact_a links to Rfam database...	0.66	0.66	0.66	67	54513	35	9	26	0	35
ASE_00185	RNaseP_bact_a links to Rfam database...	0.74	0.71	0.77	91	73418	33	5	22	6	37
ASE_00186	RNaseP_bact_a links to Rfam database...	0.74	0.70	0.79	92	78886	30	3	22	5	40
ASE_00187	RNaseP_arch links to Rfam database...	0.47	0.44	0.49	51	68531	58	6	47	5	64
ASE_00189	RNaseP_bact_b links to Rfam database...	0.52	0.49	0.54	50	63098	47	8	34	5	52
ASE_00190	RNaseP_bact_b links to Rfam database...	0.57	0.54	0.60	49	45369	35	6	27	2	41
ASE_00191	RNaseP_arch links to Rfam database...	0.69	0.67	0.72	41	29589	22	1	15	6	20
ASE_00192	RNaseP_bact_b links to Rfam database...	0.41	0.40	0.42	53	84541	78	9	63	6	80
ASE_00194	RNaseP_bact_b links to Rfam database...	0.54	0.53	0.56	63	73423	54	11	39	4	56
ASE_00195	-	0.60	0.58	0.62	77	86195	53	2	46	5	56
ASE_00196	RNaseP_arch links to Rfam database...	0.73	0.72	0.75	54	31554	21	2	16	3	21
ASE_00197	RNaseP_bact_a links to Rfam database...	0.54	0.50	0.58	73	89127	58	2	51	5	72
ASE_00198	RNaseP_bact_a links to Rfam database...	0.53	0.53	0.53	54	52549	47	7	40	0	48
ASE_00203	RNaseP_bact_a links to Rfam database...	0.62	0.61	0.63	59	46572	34	6	28	0	37
ASE_00204	RNaseP_bact_b links to Rfam database...	0.65	0.61	0.69	68	67798	35	7	23	5	44
ASE_00205	RNaseP_arch links to Rfam database...	0.43	0.43	0.43	39	45966	54	7	44	3	51
ASE_00209	RNaseP_arch links to Rfam database...	0.39	0.38	0.42	33	42992	46	5	41	0	55
ASE_00210	RNaseP_arch links to Rfam database...	0.59	0.60	0.59	39	27195	28	6	21	1	26
ASE_00212	RNaseP_bact_a links to Rfam database...	0.51	0.49	0.54	72	93827	66	5	57	4	76
ASE_00213	RNaseP_arch links to Rfam database...	0.74	0.73	0.76	48	27198	16	3	12	1	18
ASE_00214	RNaseP_bact_a links to Rfam database...	0.79	0.77	0.81	79	56182	27	3	16	8	24
ASE_00215	RNaseP_bact_a links to Rfam database...	0.58	0.55	0.62	54	48429	35	7	26	2	45
ASE_00216	RNaseP_bact_a links to Rfam database...	0.66	0.66	0.67	54	39259	28	9	18	1	28
ASE_00217	RNaseP_bact_a links to Rfam database...	0.30	0.29	0.33	26	40390	58	6	48	4	64
ASE_00221	RNaseP_bact_a links to Rfam database...	0.57	0.52	0.64	61	64524	38	3	32	3	56
ASE_00222	RNaseP_arch links to Rfam database...	0.59	0.59	0.61	92	111949	61	10	50	1	65
ASE_00227	RNaseP_bact_a links to Rfam database...	0.30	0.29	0.32	38	78885	80	5	75	0	95
ASE_00228	RNaseP_bact_a links to Rfam database...	0.53	0.55	0.52	47	46880	44	14	30	0	39
ASE_00229	RNaseP_bact_a links to Rfam database...	0.60	0.60	0.61	52	42401	33	10	23	0	35
ASE_00231	RNaseP_bact_a links to Rfam database...	0.31	0.31	0.31	30	47798	67	8	59	0	66
ASE_00232	RNaseP_bact_a links to Rfam database...	0.59	0.58	0.60	49	38422	34	3	29	2	35
ASE_00234	RNaseP_bact_a links to Rfam database...	0.51	0.47	0.54	61	75354	55	4	47	4	68
ASE_00237	RNaseP_nuc links to Rfam database...	0.00	0.00	0.00	0	45667	96	29	57	10	56
ASE_00238	RNaseP_bact_a links to Rfam database...	0.52	0.50	0.53	57	64154	55	1	49	5	57
ASE_00240	RNaseP_bact_a links to Rfam database...	0.61	0.59	0.63	55	46578	40	2	30	8	38
ASE_00241	RNaseP_bact_a links to Rfam database...	0.55	0.53	0.58	46	43876	41	5	29	7	41
ASE_00242	RNaseP_bact_a links to Rfam database...	0.72	0.68	0.76	76	60975	27	3	21	3	36
ASE_00245	RNaseP_nuc links to Rfam database...	0.90	0.87	0.93	68	55205	35	0	5	30	10
ASE_00246	RNaseP_nuc links to Rfam database...	0.16	0.18	0.15	12	48123	79	19	51	9	55
ASE_00247	RNaseP_nuc links to Rfam database...	0.17	0.19	0.15	12	54207	97	18	48	31	52
ASE_00248	RNaseP_bact_a links to Rfam database...	0.41	0.38	0.44	43	62383	55	3	52	0	71
ASE_00250	RNaseP_bact_a links to Rfam database...	0.48	0.46	0.50	60	78884	62	5	54	3	71
ASE_00252	RNaseP_bact_a links to Rfam database...	0.56	0.54	0.58	91	115284	69	5	60	4	77
ASE_00254	RNaseP_bact_a links to Rfam database...	0.74	0.72	0.76	59	36778	24	6	13	5	23
ASE_00255	RNaseP_bact_a links to Rfam database...	0.48	0.45	0.50	59	74573	59	7	52	0	71
ASE_00257	RNaseP_bact_a links to Rfam database...	0.56	0.56	0.57	54	50946	40	9	31	0	43
ASE_00258	RNaseP_nuc links to Rfam database...	0.73	0.67	0.80	36	26751	21	0	9	12	18
ASE_00259	RNaseP_bact_a links to Rfam database...	0.49	0.45	0.52	55	73048	53	4	46	3	66
ASE_00263	RNaseP_bact_a links to Rfam database...	0.62	0.62	0.62	74	70380	47	5	41	1	46
ASE_00264	RNaseP_nuc links to Rfam database...	0.89	0.83	0.97	83	49055	16	0	3	13	17
ASE_00267	RNaseP_bact_a links to Rfam database...	0.49	0.45	0.53	40	45074	45	4	32	9	48
ASE_00270	RNaseP_bact_a links to Rfam database...	0.68	0.66	0.69	85	72267	40	7	31	2	43
ASE_00274	RNaseP_bact_a links to Rfam database...	0.50	0.49	0.51	50	55513	48	9	39	0	53
ASE_00277	RNaseP_bact_a links to Rfam database...	0.39	0.38	0.39	35	48115	57	9	46	2	56
ASE_00279	RNaseP_bact_a links to Rfam database...	0.70	0.66	0.74	67	53210	28	0	24	4	34
ASE_00280	RNaseP_bact_a links to Rfam database...	0.62	0.60	0.64	59	51911	38	4	29	5	39
ASE_00281	RNaseP_bact_a links to Rfam database...	0.54	0.51	0.58	45	44473	39	0	33	6	43
ASE_00282	RNaseP_bact_a links to Rfam database...	0.55	0.54	0.56	69	77692	54	6	48	0	58
ASE_00283	RNaseP_bact_a links to Rfam database...	0.82	0.79	0.86	84	61678	22	2	12	8	23
ASE_00284	RNaseP_bact_a links to Rfam database...	0.63	0.61	0.65	66	58209	41	5	31	5	42
ASE_00285	RNaseP_bact_a links to Rfam database...	0.69	0.65	0.73	79	68898	36	2	27	7	43
ASE_00286	RNaseP_bact_a links to Rfam database...	0.43	0.42	0.43	39	46574	61	3	49	9	53
ASE_00287	RNaseP_bact_a links to Rfam database...	0.70	0.66	0.75	68	54855	30	2	21	7	35
ASE_00288	RNaseP_bact_a links to Rfam database...	0.45	0.43	0.47	40	45970	47	3	43	1	53
ASE_00289	RNaseP_bact_a links to Rfam database...	0.66	0.62	0.70	97	100887	44	3	38	3	60
ASE_00291	-	0.37	0.36	0.39	34	48429	54	9	44	1	60
ASE_00292	RNaseP_bact_a links to Rfam database...	0.64	0.59	0.70	82	81693	38	3	32	3	56
ASE_00294	RNaseP_bact_a links to Rfam database...	0.78	0.74	0.83	127	114328	29	3	23	3	44
ASE_00295	RNaseP_bact_a links to Rfam database...	0.63	0.59	0.67	77	73805	41	6	32	3	54
ASE_00296	RNaseP_bact_a links to Rfam database...	0.29	0.28	0.31	40	91676	90	9	81	0	105
ASE_00297	RNaseP_bact_a links to Rfam database...	0.68	0.67	0.69	66	52879	30	4	26	0	32
ASE_00298	RNaseP_bact_a links to Rfam database...	0.46	0.44	0.48	50	67423	59	6	49	4	63
ASE_00299	RNaseP_bact_a links to Rfam database...	0.50	0.48	0.52	48	49362	52	5	40	7	52
ASE_00303	RNaseP_nuc links to Rfam database...	0.62	0.64	0.60	61	67795	47	10	30	7	34
ASE_00305	RNaseP_bact_b links to Rfam database...	0.67	0.68	0.65	58	54526	37	14	17	6	27
ASE_00313	RNaseP_nuc links to Rfam database...	0.72	0.71	0.72	63	62394	46	6	18	22	26
ASE_00316	RNaseP_nuc links to Rfam database...	0.59	0.57	0.61	56	107788	84	7	29	48	42
ASE_00318	RNaseP_bact_b links to Rfam database...	0.65	0.64	0.67	75	80088	41	13	24	4	43
ASE_00321	RNaseP_bact_b links to Rfam database...	0.56	0.56	0.56	49	54528	41	7	31	3	39
ASE_00322	-	0.74	0.77	0.71	37	29351	38	3	12	23	11
ASE_00327	RNaseP_nuc links to Rfam database...	0.81	0.76	0.85	68	57211	32	4	8	20	21
ASE_00328	RNaseP_bact_b links to Rfam database...	0.40	0.40	0.41	45	72660	73	3	63	7	67
ASE_00329	RNaseP_nuc links to Rfam database...	0.66	0.70	0.62	44	40684	46	9	18	19	19
ASE_00330	RNaseP_nuc links to Rfam database...	0.70	0.70	0.71	63	56191	46	4	22	20	27
ASE_00332	RNaseP_bact_a links to Rfam database...	0.54	0.51	0.56	71	81683	57	2	54	1	67
ASE_00335	RNaseP_bact_b links to Rfam database...	0.48	0.47	0.50	54	75358	61	5	49	7	62
ASE_00337	RNaseP_nuc links to Rfam database...	0.58	0.58	0.59	41	39270	43	5	24	14	30
ASE_00338	RNaseP_nuc links to Rfam database...	0.60	0.54	0.66	53	66350	49	5	22	22	45
ASE_00339	RNaseP_bact_a links to Rfam database...	0.53	0.52	0.53	62	80084	67	5	49	13	57
ASE_00340	RNaseP_bact_a links to Rfam database...	0.75	0.74	0.76	63	45973	29	6	14	9	22
ASE_00342	RNaseP_bact_a links to Rfam database...	0.56	0.51	0.60	59	62383	39	2	37	0	56
ASE_00343	RNaseP_bact_a links to Rfam database...	0.63	0.63	0.63	71	83323	55	8	34	13	42
ASE_00344	-	0.82	0.80	0.83	45	27207	27	4	5	18	11
ASE_00346	RNaseP_arch links to Rfam database...	0.30	0.29	0.31	28	48115	64	7	55	2	69
ASE_00350	-	0.85	0.79	0.91	41	29601	30	0	4	26	11
ASE_00353	RNaseP_bact_a links to Rfam database...	0.49	0.50	0.48	53	57859	58	11	47	0	54
ASE_00359	RNaseP_arch links to Rfam database...	0.49	0.49	0.49	39	42698	46	3	38	5	41
ASE_00360	RNaseP_arch links to Rfam database...	0.22	0.23	0.22	15	29335	57	10	43	4	50
ASE_00361	RNaseP_bact_a links to Rfam database...	0.49	0.46	0.51	59	75351	59	7	49	3	68
ASE_00362	RNaseP_bact_a links to Rfam database...	0.62	0.62	0.63	56	48116	36	6	27	3	35
ASE_00363	RNaseP_bact_a links to Rfam database...	0.55	0.55	0.54	52	51264	47	4	40	3	42
ASE_00364	RNaseP_bact_a links to Rfam database...	0.31	0.30	0.32	32	54184	72	7	62	3	73
ASE_00366	RNaseP_bact_a links to Rfam database...	0.56	0.58	0.54	57	58547	50	10	39	1	41
ASE_00367	RNaseP_bact_a links to Rfam database...	0.55	0.56	0.55	48	42983	43	6	34	3	38
ASE_00369	RNaseP_bact_a links to Rfam database...	0.65	0.63	0.67	67	55845	37	3	30	4	40
ASE_00370	RNaseP_bact_a links to Rfam database...	0.67	0.65	0.69	55	41825	25	7	18	0	29
ASE_00372	RNaseP_bact_a links to Rfam database...	0.70	0.69	0.71	69	51906	31	5	23	3	31
ASE_00374	RNaseP_bact_a links to Rfam database...	0.56	0.56	0.57	49	44764	37	8	29	0	39
ASE_00375	RNaseP_bact_a links to Rfam database...	0.72	0.68	0.77	75	60280	28	1	22	5	35
ASE_00376	RNaseP_bact_a links to Rfam database...	0.52	0.50	0.55	53	56856	47	4	40	3	52
ASE_00377	RNaseP_bact_a links to Rfam database...	0.68	0.66	0.70	71	57529	36	4	26	6	36
ASE_00379	RNaseP_bact_a links to Rfam database...	0.70	0.69	0.71	61	45970	34	3	22	9	28
ASE_00380	RNaseP_bact_a links to Rfam database...	0.47	0.44	0.49	44	54857	50	1	44	5	55
ASE_00382	RNaseP_bact_a links to Rfam database...	0.53	0.52	0.54	44	41824	40	6	31	3	40
ASE_00383	RNaseP_bact_a links to Rfam database...	0.53	0.50	0.55	53	54519	47	4	39	4	52
ASE_00384	RNaseP_bact_a links to Rfam database...	0.60	0.59	0.61	54	48428	39	2	32	5	38
ASE_00385	RNaseP_bact_a links to Rfam database...	0.55	0.52	0.58	42	41832	35	4	27	4	39
ASE_00386	RNaseP_bact_a links to Rfam database...	0.62	0.61	0.63	59	50309	42	2	33	7	37
ASE_00387	RNaseP_bact_a links to Rfam database...	0.44	0.44	0.44	46	55841	58	6	52	0	58
ASE_00388	RNaseP_bact_a links to Rfam database...	0.73	0.73	0.74	65	45665	28	3	20	5	24
ASE_00390	RNaseP_bact_a links to Rfam database...	0.49	0.47	0.51	40	42117	45	6	32	7	45
ASE_00393	RNaseP_bact_a links to Rfam database...	0.36	0.34	0.38	32	47810	59	3	50	6	61
ASE_00394	RNaseP_bact_a links to Rfam database...	0.75	0.75	0.75	70	46878	26	5	18	3	23
ASE_00395	RNaseP_bact_a links to Rfam database...	0.55	0.58	0.52	49	41521	46	8	38	0	35
ASE_00396	RNaseP_bact_a links to Rfam database...	0.57	0.58	0.56	48	41530	43	8	30	5	35
ASE_00397	RNaseP_bact_a links to Rfam database...	0.57	0.57	0.58	60	54511	46	3	41	2	45
ASE_00398	RNaseP_bact_a links to Rfam database...	0.66	0.64	0.68	67	55846	35	3	29	3	37
ASE_00400	RNaseP_bact_a links to Rfam database...	0.56	0.55	0.57	58	57869	44	4	39	1	48
ASE_00401	RNaseP_bact_a links to Rfam database...	0.56	0.56	0.56	70	76904	54	11	43	0	56
ASE_00402	RNaseP_bact_a links to Rfam database...	0.62	0.61	0.63	52	42403	34	6	25	3	33
ASE_00403	RNaseP_bact_a links to Rfam database...	0.46	0.44	0.47	47	55846	53	3	49	1	60
ASE_00404	RNaseP_bact_a links to Rfam database...	0.55	0.54	0.57	46	42990	42	0	35	7	39
ASE_00406	RNaseP_bact_a links to Rfam database...	0.70	0.67	0.73	63	48742	27	8	15	4	31
ASE_00408	-	0.49	0.48	0.50	34	32317	39	2	32	5	37
ASE_00409	-	0.50	0.49	0.51	41	40960	40	2	38	0	42
ASE_00411	RNaseP_bact_a links to Rfam database...	0.35	0.36	0.34	32	49362	61	11	50	0	57
ASE_00412	RNaseP_bact_a links to Rfam database...	0.45	0.44	0.47	46	58213	54	8	44	2	59
ASE_00413	RNaseP_bact_a links to Rfam database...	0.53	0.56	0.51	45	44462	44	14	30	0	36
ASE_00414	RNaseP_bact_a links to Rfam database...	0.37	0.35	0.40	33	46278	56	2	47	7	62
ASE_00415	RNaseP_bact_a links to Rfam database...	0.43	0.44	0.42	45	54840	63	9	52	2	58
ASE_00416	RNaseP_bact_a links to Rfam database...	0.70	0.67	0.73	85	77305	38	2	29	7	42
ASE_00417	RNaseP_arch links to Rfam database...	0.36	0.37	0.35	37	54509	72	10	59	3	63
ASE_00418	RNaseP_arch links to Rfam database...	0.21	0.21	0.20	16	38702	65	12	51	2	59
ASE_00419	RNaseP_bact_a links to Rfam database...	0.77	0.74	0.81	76	54852	22	4	14	4	27
ASE_00420	RNaseP_nuc links to Rfam database...	0.65	0.68	0.61	43	43295	56	3	24	29	20
ASE_00422	RNaseP_bact_a links to Rfam database...	0.70	0.68	0.73	64	46883	31	5	19	7	30
ASE_00423	RNaseP_bact_a links to Rfam database...	0.50	0.49	0.52	53	56852	51	7	41	3	56
ASE_00426	RNaseP_bact_a links to Rfam database...	0.40	0.40	0.41	43	60969	63	9	54	0	65
ASE_00427	RNaseP_nuc links to Rfam database...	0.15	0.20	0.12	9	40677	83	23	46	14	37
ASE_00428	RNaseP_bact_a links to Rfam database...	0.53	0.51	0.56	64	76521	55	5	46	4	61
ASE_00429	-	0.39	0.38	0.41	25	28142	44	1	35	8	41
ASE_00430	RNaseP_bact_a links to Rfam database...	0.64	0.62	0.66	60	46880	38	5	26	7	37
ASE_00431	RNaseP_bact_a links to Rfam database...	0.52	0.49	0.55	47	46274	44	4	35	5	48
ASE_00434	RNaseP_bact_b links to Rfam database...	0.63	0.59	0.66	65	68167	46	8	25	13	45
ASE_00437	RNaseP_bact_a links to Rfam database...	0.42	0.40	0.44	54	79278	69	5	64	0	81
ASE_00438	RNaseP_bact_a links to Rfam database...	0.48	0.44	0.52	51	65967	48	2	46	0	65
ASE_00441	RNaseP_bact_a links to Rfam database...	0.77	0.72	0.82	81	64162	30	2	16	12	31
ASE_00443	RNaseP_nuc links to Rfam database...	0.92	0.86	0.98	43	26752	30	0	1	29	7
ASE_00447	RNaseP_bact_a links to Rfam database...	0.50	0.47	0.52	55	60273	53	1	49	3	61
ASE_00448	RNaseP_bact_a links to Rfam database...	0.22	0.22	0.23	25	64150	92	6	80	6	87
ASE_00451	RNaseP_bact_a links to Rfam database...	0.63	0.59	0.68	74	70767	38	2	33	3	51
ASE_00452	-	0.88	0.87	0.89	34	20872	29	0	4	25	5
ASE_00453	-	0.87	0.85	0.90	44	34142	41	0	5	36	8
ASE_00454	RNaseP_nuc links to Rfam database...	0.51	0.51	0.52	32	43303	53	2	28	23	31
CRW_00010	-	0.80	0.78	0.82	98	102711	38	6	16	16	28
CRW_00011	-	0.65	0.66	0.65	91	118200	61	8	42	11	47
CRW_00013	Intron_gpI links to Rfam database...	0.24	0.24	0.24	28	103624	107	18	70	19	87
CRW_00014	-	0.36	0.37	0.36	45	103615	91	13	67	11	78
CRW_00016	Intron_gpI links to Rfam database...	0.62	0.57	0.67	68	77320	45	5	28	12	52
CRW_00017	-	0.40	0.44	0.37	40	92126	88	18	51	19	51
CRW_00608	-	0.86	0.84	0.89	66	35704	18	0	8	10	13
CRW_00610	Intron_gpI links to Rfam database...	0.45	0.44	0.46	36	36236	43	6	37	0	45
CRW_00611	-	0.61	0.60	0.63	45	31303	34	1	26	7	30
CRW_00613	Intron_gpI links to Rfam database...	0.63	0.58	0.68	45	34914	29	1	20	8	33
CRW_00614	Intron_gpI links to Rfam database...	0.09	0.11	0.08	6	121694	140	20	51	69	51
CRW_00618	Intron_gpI links to Rfam database...	0.18	0.20	0.17	12	56210	83	10	48	25	49
CRW_00626	-	0.57	0.58	0.57	60	100920	70	9	36	25	44
CRW_00629	-	0.52	0.52	0.52	64	91256	60	18	40	2	58
CRW_00632	-	0.56	0.55	0.56	71	82901	62	9	47	6	57
CRW_00633	Intron_gpI links to Rfam database...	0.69	0.67	0.71	71	63446	33	8	21	4	35
CRW_00634	Intron_gpI links to Rfam database...	0.33	0.34	0.33	32	64522	70	14	52	4	62
CRW_00635	-	0.45	0.45	0.45	61	109142	85	10	65	10	76
CRW_00636	-	0.52	0.51	0.53	73	114821	71	10	56	5	70
CRW_00641	-	0.44	0.46	0.43	35	39821	56	9	38	9	41
CRW_00642	-	0.41	0.45	0.38	29	47201	56	12	36	8	36
CRW_00643	-	0.45	0.48	0.42	59	123115	93	27	55	11	63
CRW_00645	-	0.77	0.81	0.74	54	35438	28	8	11	9	13
CRW_00646	-	0.51	0.53	0.50	34	34912	39	6	28	5	30
CRW_00650	-	0.52	0.51	0.52	73	112910	71	9	58	4	69
CRW_00651	-	0.43	0.45	0.42	54	99999	79	8	67	4	67
CRW_00653	-	0.66	0.65	0.67	87	94700	47	6	37	4	47
CRW_00654	-	0.70	0.67	0.73	83	78096	36	4	27	5	41
CRW_00655	-	0.87	0.85	0.89	106	89134	18	7	6	5	18
CRW_00656	-	0.46	0.44	0.48	57	90406	67	9	53	5	72
CRW_00657	-	0.75	0.74	0.77	101	105898	35	2	29	4	35
CRW_00658	-	0.48	0.48	0.47	49	74587	58	22	33	3	53
CRW_00659	-	0.37	0.41	0.34	25	32312	52	16	32	4	36
CRW_00660	-	0.54	0.55	0.54	33	22094	31	7	21	3	27
CRW_00661	-	0.20	0.22	0.18	11	24249	52	16	34	2	40
CRW_00662	-	0.36	0.37	0.36	24	28613	50	7	36	7	41
CRW_00663	-	0.00	0.00	0.00	0	26039	67	11	56	0	61
CRW_00664	-	0.17	0.18	0.16	14	53538	79	16	60	3	64
CRW_00665	-	0.17	0.19	0.16	9	23596	51	10	38	3	39
CRW_00666	-	0.51	0.52	0.50	65	96010	78	11	55	12	61
CRW_00669	-	0.39	0.40	0.39	48	97337	78	18	58	2	71
CRW_00670	Intron_gpI links to Rfam database...	0.79	0.74	0.83	89	70018	21	6	12	3	31
CRW_00671	Intron_gpI links to Rfam database...	0.65	0.62	0.68	72	62729	39	7	27	5	45
CRW_00672	Intron_gpI links to Rfam database...	0.48	0.49	0.47	54	72275	65	19	42	4	57
CRW_00673	-	0.79	0.83	0.76	87	100014	47	22	5	20	18
CRW_00674	Intron_gpI links to Rfam database...	0.58	0.56	0.62	69	83324	45	7	36	2	55
CRW_00676	Intron_gpI links to Rfam database...	0.54	0.55	0.53	63	93410	69	15	40	14	52
CRW_00677	-	0.53	0.53	0.52	56	71902	59	13	39	7	49
CRW_00679	-	0.22	0.22	0.22	24	76525	93	14	73	6	83
CRW_00681	-	0.46	0.50	0.43	56	112920	87	19	55	13	56
CRW_00686	-	0.49	0.50	0.49	62	95139	73	8	57	8	63
CRW_00687	-	0.66	0.70	0.62	46	28606	32	8	20	4	20
CRW_00688	-	0.75	0.77	0.73	44	21885	17	7	9	1	13
CRW_00689	-	0.65	0.68	0.63	52	33588	32	11	19	2	25
CRW_00690	-	0.62	0.59	0.64	41	33347	30	7	16	7	28
CRW_00691	-	0.58	0.60	0.56	40	27190	33	6	25	2	27
CRW_00692	Intron_gpI links to Rfam database...	0.20	0.21	0.19	19	68537	84	24	55	5	71
CRW_00693	-	0.58	0.57	0.58	70	89133	59	7	43	9	52
CRW_00694	-	0.63	0.63	0.63	77	85782	52	6	40	6	45
CRW_00699	-	0.62	0.61	0.62	77	91682	48	6	41	1	49
CRW_00703	-	0.53	0.58	0.49	38	40393	46	15	24	7	28
CRW_00715	-	0.76	0.73	0.78	76	69281	24	3	18	3	28
CRW_00721	-	0.52	0.59	0.47	40	58567	61	17	29	15	28
PDB_00078	-	0.44	0.42	0.48	48	49669	53	6	47	0	67
PDB_00079	-	0.64	0.60	0.68	85	121646	69	9	31	29	57
PDB_00278	-	0.19	0.19	0.19	14	24904	58	7	51	0	58
PDB_00398	-	0.00	0.00	0.00	0	71889	121	21	100	0	103
PDB_00403	-	0.52	0.53	0.51	81	124592	85	16	61	8	72
PDB_00423	-	0.17	0.16	0.18	12	26731	53	2	51	0	62
PDB_00528	-	0.23	0.24	0.23	25	45947	85	6	78	1	78
PDB_00555	-	0.43	0.40	0.46	35	25349	44	0	41	3	53
PDB_00601	-	0.40	0.38	0.42	30	36243	42	6	36	0	49
PDB_00701	-	0.47	0.45	0.49	49	45351	52	5	46	1	60
PDB_00739	-	0.00	0.00	0.00	0	25807	71	6	65	0	67
PDB_00747	-	0.66	0.60	0.73	48	24465	18	0	18	0	32
PDB_00827	Intron_gpI links to Rfam database...	0.58	0.52	0.66	42	26964	23	1	21	1	39
PDB_00917	-	0.49	0.47	0.51	45	35157	49	4	39	6	50
PDB_00919	RNaseP_bact_a links to Rfam database...	0.50	0.47	0.55	48	44165	43	3	37	3	55
PDB_00985	-	0.04	0.05	0.04	3	30550	76	20	55	1	61
PDB_01076	-	0.71	0.62	0.80	49	23375	19	0	12	7	30
PDB_01129	-	0.27	0.28	0.26	20	35434	62	15	42	5	51
PDB_01144	-	0.28	0.26	0.31	33	82923	80	2	70	8	94
PDB_01157	-	0.29	0.29	0.30	28	49993	65	9	56	0	70
PDB_01161	-	0.12	0.13	0.12	10	36773	73	9	64	0	65
PDB_01193	-	0.40	0.39	0.41	59	105885	94	13	73	8	92
RFA_00597	Telomerase-vert links to Rfam database...	0.50	0.50	0.50	55	97792	79	9	47	23	54
RFA_00598	Telomerase-vert links to Rfam database...	0.68	0.64	0.71	65	84575	52	6	20	26	36
RFA_00599	Telomerase-vert links to Rfam database...	0.67	0.70	0.63	78	101352	64	17	28	19	33
RFA_00600	Telomerase-vert links to Rfam database...	0.62	0.69	0.56	69	120172	85	29	25	31	31
RFA_00601	Telomerase-vert links to Rfam database...	0.47	0.49	0.44	56	99109	89	21	49	19	58
RFA_00602	Telomerase-vert links to Rfam database...	0.51	0.53	0.48	62	101347	86	18	48	20	54
RFA_00606	Telomerase-cil links to Rfam database...	0.67	0.67	0.68	26	21283	25	7	5	13	13
RFA_00616	-	0.51	0.51	0.51	20	22966	33	6	13	14	19
RFA_00618	-	0.45	0.44	0.46	17	22968	34	6	14	14	22
RFA_00619	-	0.36	0.41	0.33	16	22742	43	10	23	10	23
RFA_00620	Telomerase-cil links to Rfam database...	0.67	0.64	0.69	25	21909	24	3	8	13	14
RFA_00621	RNase_MRP links to Rfam database...	0.39	0.39	0.38	30	46281	63	9	40	14	46
RFA_00623	RNase_MRP links to Rfam database...	0.46	0.45	0.47	35	43881	54	7	33	14	43
RFA_00624	RNase_MRP links to Rfam database...	0.43	0.46	0.40	28	30065	47	6	36	5	33
RFA_00626	rne5 links to Rfam database...	0.87	0.84	0.91	73	56536	32	2	5	25	14
RFA_00627	rne5 links to Rfam database...	0.70	0.67	0.74	58	56875	36	4	16	16	29
RFA_00628	rne5 links to Rfam database...	0.86	0.83	0.89	71	57211	31	1	8	22	15
RFA_00630	rne5 links to Rfam database...	0.59	0.59	0.59	51	56866	48	8	28	12	36
RFA_00639	7SK links to Rfam database...	0.17	0.18	0.16	16	54518	83	18	63	2	71
RFA_00814	R2_retro_el links to Rfam database...	0.77	0.78	0.76	32	25158	23	4	6	13	9
RFA_00815	R2_retro_el links to Rfam database...	0.56	0.61	0.51	25	24482	36	8	16	12	16
RFA_00816	R2_retro_el links to Rfam database...	0.60	0.66	0.55	27	23171	30	13	9	8	14
RFA_00817	R2_retro_el links to Rfam database...	0.10	0.12	0.08	5	21882	58	18	40	0	36
RFA_00818	R2_retro_el links to Rfam database...	0.19	0.22	0.17	9	20247	46	19	26	1	32
RFA_00819	R2_retro_el links to Rfam database...	0.96	0.95	0.98	39	27926	28	0	1	27	2
SRP_00002	Metazoa_SRP links to Rfam database...	0.85	0.80	0.89	82	45058	11	4	6	1	20
SRP_00003	-	0.83	0.86	0.79	83	45951	23	13	9	1	13
SRP_00006	Metazoa_SRP links to Rfam database...	0.93	0.88	0.98	89	45662	9	0	2	7	12
SRP_00009	Plant_SRP links to Rfam database...	0.49	0.47	0.51	48	46571	49	9	37	3	54
SRP_00011	Plant_SRP links to Rfam database...	0.43	0.41	0.45	43	46265	52	4	48	0	61
SRP_00012	Plant_SRP links to Rfam database...	0.83	0.77	0.89	78	46272	14	0	10	4	23
SRP_00015	Plant_SRP links to Rfam database...	0.54	0.53	0.55	52	46266	47	8	34	5	47
SRP_00016	Archaea_SRP links to Rfam database...	0.91	0.87	0.94	95	47794	8	0	6	2	14
SRP_00018	Fungi_SRP links to Rfam database...	0.72	0.69	0.75	56	38428	30	1	18	11	25
SRP_00019	Fungi_SRP links to Rfam database...	0.90	0.88	0.92	80	35959	12	4	3	5	11
SRP_00023	-	0.00	0.00	0.00	0	20859	51	13	38	0	35
SRP_00024	Bacteria_large_SRP links to Rfam database...	0.76	0.77	0.75	67	37586	22	7	15	0	20
SRP_00026	Bacteria_large_SRP links to Rfam database...	0.69	0.69	0.69	61	36768	33	2	25	6	27
SRP_00027	Bacteria_large_SRP links to Rfam database...	0.70	0.67	0.73	58	37049	21	3	18	0	29
SRP_00030	Bacteria_large_SRP links to Rfam database...	0.77	0.77	0.76	68	36767	23	4	17	2	20
SRP_00031	Bacteria_large_SRP links to Rfam database...	0.70	0.69	0.71	61	36229	29	2	23	4	28
SRP_00037	Bacteria_large_SRP links to Rfam database...	0.62	0.60	0.65	52	36505	30	5	23	2	35
SRP_00050	Metazoa_SRP links to Rfam database...	0.96	0.93	1.00	92	44758	2	0	0	2	7
SRP_00053	Metazoa_SRP links to Rfam database...	0.89	0.86	0.92	81	45062	16	0	7	9	13
SRP_00060	Metazoa_SRP links to Rfam database...	0.95	0.93	0.98	93	44456	7	0	2	5	7
SRP_00061	Metazoa_SRP links to Rfam database...	0.95	0.93	0.97	93	44754	9	0	3	6	7
SRP_00066	Metazoa_SRP links to Rfam database...	0.00	0.00	0.00	0	45359	92	10	82	0	100
SRP_00069	Fungi_SRP links to Rfam database...	0.62	0.59	0.66	50	34377	29	2	24	3	35
SRP_00073	Fungi_SRP links to Rfam database...	0.63	0.66	0.61	47	38983	44	7	23	14	24
SRP_00076	-	0.00	0.00	0.00	0	25356	82	17	52	13	39
SRP_00079	Plant_SRP links to Rfam database...	0.50	0.52	0.49	46	41811	53	7	41	5	42
SRP_00085	Plant_SRP links to Rfam database...	0.63	0.60	0.65	61	45357	35	6	27	2	40
SRP_00086	Metazoa_SRP links to Rfam database...	0.68	0.66	0.69	66	44158	30	3	26	1	34
SRP_00087	Fungi_SRP links to Rfam database...	0.31	0.36	0.27	21	37324	62	19	37	6	37
SRP_00088	Bacteria_large_SRP links to Rfam database...	0.68	0.69	0.67	61	34100	30	3	27	0	28
SRP_00089	Bacteria_large_SRP links to Rfam database...	0.83	0.81	0.86	73	35693	12	1	11	0	17
SRP_00090	Bacteria_large_SRP links to Rfam database...	0.32	0.31	0.33	28	35427	56	3	53	0	62
SRP_00091	Fungi_SRP links to Rfam database...	0.82	0.83	0.81	79	52878	23	4	14	5	16
SRP_00099	Plant_SRP links to Rfam database...	0.59	0.59	0.59	56	44755	41	7	32	2	39
SRP_00102	Metazoa_SRP links to Rfam database...	0.92	0.88	0.97	89	44459	4	0	3	1	12
SRP_00103	Metazoa_SRP links to Rfam database...	0.88	0.86	0.91	88	45354	11	1	8	2	14
SRP_00104	Fungi_SRP links to Rfam database...	0.48	0.52	0.44	36	34372	53	8	37	8	33
SRP_00108	-	0.61	0.66	0.57	46	38422	41	11	24	6	24
SRP_00117	Metazoa_SRP links to Rfam database...	0.80	0.76	0.84	78	45358	16	3	12	1	24
SRP_00118	-	0.81	0.79	0.83	75	39250	16	1	14	1	20
SRP_00120	-	0.89	0.86	0.93	74	37321	9	1	5	3	12
SRP_00123	Metazoa_SRP links to Rfam database...	0.83	0.77	0.89	70	36506	12	3	6	3	21
SRP_00124	Metazoa_SRP links to Rfam database...	0.54	0.52	0.56	44	37049	37	5	30	2	41
SRP_00125	-	0.66	0.62	0.70	66	50309	31	1	27	3	41
SRP_00127	Fungi_SRP links to Rfam database...	0.73	0.71	0.75	85	72277	34	7	21	6	34
SRP_00130	Archaea_SRP links to Rfam database...	0.27	0.27	0.27	26	49675	69	10	59	0	71
SRP_00136	Fungi_SRP links to Rfam database...	0.52	0.58	0.48	41	44167	55	16	29	10	30
SRP_00142	Archaea_SRP links to Rfam database...	0.59	0.60	0.58	56	45960	42	5	35	2	37
SRP_00143	Archaea_SRP links to Rfam database...	0.85	0.84	0.86	85	49671	19	1	13	5	16
SRP_00144	Archaea_SRP links to Rfam database...	0.74	0.73	0.75	69	46573	30	1	22	7	25
SRP_00148	Fungi_SRP links to Rfam database...	0.33	0.36	0.32	31	49988	78	4	63	11	56
SRP_00152	Plant_SRP links to Rfam database...	0.65	0.63	0.67	65	45656	35	1	31	3	38
SRP_00153	Plant_SRP links to Rfam database...	0.75	0.71	0.79	76	46875	22	6	14	2	31
SRP_00157	Fungi_SRP links to Rfam database...	0.37	0.40	0.35	29	44169	62	15	40	7	43
SRP_00158	Fungi_SRP links to Rfam database...	0.32	0.37	0.27	42	124098	121	42	69	10	73
SRP_00160	Fungi_SRP links to Rfam database...	0.48	0.48	0.48	63	86190	69	9	58	2	67
SRP_00167	-	0.30	0.30	0.30	25	38698	63	6	52	5	59
SRP_00168	-	0.42	0.42	0.42	38	38690	53	3	50	0	53
SRP_00171	Metazoa_SRP links to Rfam database...	0.00	0.00	0.00	0	45355	96	16	80	0	88
SRP_00172	-	0.73	0.71	0.76	65	38974	27	0	21	6	26
SRP_00173	Bacteria_large_SRP links to Rfam database...	0.73	0.71	0.75	64	38141	27	1	20	6	26
SRP_00174	Bacteria_large_SRP links to Rfam database...	0.74	0.74	0.73	64	38693	28	7	17	4	22
SRP_00175	Fungi_SRP links to Rfam database...	0.65	0.65	0.65	55	44466	40	2	28	10	29
SRP_00178	Plant_SRP links to Rfam database...	0.81	0.75	0.87	76	45666	13	1	10	2	26
SRP_00179	Plant_SRP links to Rfam database...	0.88	0.83	0.95	87	45964	9	1	4	4	18
SRP_00180	-	0.64	0.65	0.64	35	22523	33	4	16	13	19
SRP_00181	Plant_SRP links to Rfam database...	0.31	0.29	0.34	30	45967	59	2	57	0	72
SRP_00182	Plant_SRP links to Rfam database...	0.70	0.68	0.73	69	45961	27	5	21	1	32
SRP_00184	Plant_SRP links to Rfam database...	0.58	0.54	0.64	54	45971	35	4	27	4	46
SRP_00188	Plant_SRP links to Rfam database...	0.15	0.15	0.16	12	31049	64	6	58	0	67
SRP_00197	Archaea_SRP links to Rfam database...	0.44	0.43	0.45	43	49360	53	4	48	1	58
SRP_00198	Archaea_SRP links to Rfam database...	0.34	0.34	0.35	35	50940	66	4	61	1	68
SRP_00199	Archaea_SRP links to Rfam database...	0.65	0.65	0.66	68	50937	36	3	32	1	37
SRP_00201	Archaea_SRP links to Rfam database...	0.94	0.92	0.95	102	47788	7	0	5	2	9
SRP_00202	Archaea_SRP links to Rfam database...	0.97	0.95	0.98	111	54172	4	0	2	2	6
SRP_00203	Archaea_SRP links to Rfam database...	0.73	0.75	0.72	79	48718	37	3	28	6	26
SRP_00204	Archaea_SRP links to Rfam database...	0.60	0.61	0.60	62	49038	42	7	34	1	40
SRP_00206	Archaea_SRP links to Rfam database...	0.82	0.81	0.83	87	47790	19	5	13	1	21
SRP_00208	Archaea_SRP links to Rfam database...	0.85	0.81	0.88	82	46572	14	1	10	3	19
SRP_00228	Metazoa_SRP links to Rfam database...	0.94	0.91	0.98	86	45363	10	0	2	8	9
SRP_00230	Fungi_SRP links to Rfam database...	0.69	0.70	0.68	63	39529	32	2	27	3	27
SRP_00234	Bacteria_large_SRP links to Rfam database...	0.76	0.74	0.77	64	36232	25	1	18	6	22
SRP_00239	Plant_SRP links to Rfam database...	0.32	0.33	0.31	31	50304	69	16	52	1	62
SRP_00240	Plant_SRP links to Rfam database...	0.72	0.70	0.74	71	48109	32	2	23	7	31
SRP_00241	Plant_SRP links to Rfam database...	0.48	0.51	0.45	42	45963	53	14	37	2	40
SRP_00246	-	0.34	0.38	0.31	28	40952	68	10	51	7	46
SRP_00247	Metazoa_SRP links to Rfam database...	0.51	0.54	0.47	47	47179	56	8	44	4	40
SRP_00252	Metazoa_SRP links to Rfam database...	0.62	0.64	0.61	57	49047	38	12	25	1	32
SRP_00253	Metazoa_SRP links to Rfam database...	0.53	0.54	0.53	49	49362	49	7	37	5	41
SRP_00254	Fungi_SRP links to Rfam database...	0.49	0.54	0.45	33	32312	45	11	29	5	28
SRP_00255	Archaea_SRP links to Rfam database...	0.60	0.62	0.59	58	47487	46	3	38	5	36
SRP_00257	Metazoa_SRP links to Rfam database...	0.86	0.87	0.85	94	50929	19	4	13	2	14
SRP_00260	Metazoa_SRP links to Rfam database...	0.73	0.74	0.73	74	47793	30	8	20	2	26
SRP_00261	-	0.76	0.74	0.78	77	45352	22	3	19	0	27
SRP_00262	-	0.73	0.74	0.73	75	48413	28	4	24	0	26
SRP_00263	-	0.71	0.70	0.72	73	48414	29	10	19	0	31
SRP_00265	Fungi_SRP links to Rfam database...	0.53	0.56	0.50	41	41246	53	10	31	12	32
SRP_00267	Metazoa_SRP links to Rfam database...	0.77	0.77	0.78	74	44456	27	3	18	6	22
SRP_00276	Archaea_SRP links to Rfam database...	0.87	0.85	0.88	94	50614	14	5	8	1	16
SRP_00278	Archaea_SRP links to Rfam database...	0.77	0.76	0.78	80	45954	23	5	17	1	25
SRP_00282	Metazoa_SRP links to Rfam database...	0.32	0.37	0.28	23	43284	67	18	40	9	40
SRP_00290	Fungi_SRP links to Rfam database...	0.76	0.76	0.77	102	100443	43	3	28	12	33
SRP_00299	Metazoa_SRP links to Rfam database...	0.68	0.66	0.71	65	44162	27	2	24	1	34
SRP_00300	Metazoa_SRP links to Rfam database...	0.92	0.88	0.95	83	44166	9	0	4	5	11
SRP_00301	Fungi_SRP links to Rfam database...	0.84	0.81	0.88	70	32560	15	1	9	5	16
SRP_00302	Fungi_SRP links to Rfam database...	0.40	0.41	0.40	33	41533	60	5	45	10	48
SRP_00308	Bacteria_large_SRP links to Rfam database...	0.69	0.67	0.71	59	36232	28	4	20	4	29
SRP_00317	Metazoa_SRP links to Rfam database...	0.78	0.73	0.83	72	45063	22	0	15	7	26
SRP_00321	Archaea_SRP links to Rfam database...	0.64	0.64	0.65	69	47480	38	7	30	1	39
SRP_00322	Archaea_SRP links to Rfam database...	0.61	0.61	0.60	67	48405	45	6	38	1	42
SRP_00323	Archaea_SRP links to Rfam database...	0.93	0.92	0.94	98	47174	8	0	6	2	9
SRP_00328	Metazoa_SRP links to Rfam database...	0.64	0.65	0.63	55	39534	37	7	25	5	30
SRP_00329	Metazoa_SRP links to Rfam database...	0.74	0.73	0.75	62	39820	24	3	18	3	23
SRP_00330	Archaea_SRP links to Rfam database...	0.63	0.64	0.63	61	49989	40	4	32	4	34
SRP_00331	Metazoa_SRP links to Rfam database...	0.65	0.63	0.66	55	37592	31	2	26	3	32
SRP_00332	Archaea_SRP links to Rfam database...	0.84	0.85	0.83	90	50295	19	6	12	1	16
SRP_00335	Bacteria_large_SRP links to Rfam database...	0.32	0.44	0.24	17	35173	76	26	29	21	22
SRP_00336	-	0.23	0.23	0.23	18	38980	63	3	59	1	59
SRP_00337	Bacteria_large_SRP links to Rfam database...	0.66	0.63	0.69	57	35428	28	2	24	2	34
SRP_00339	Archaea_SRP links to Rfam database...	0.64	0.64	0.64	60	44457	37	6	28	3	34
SRP_00340	Metazoa_SRP links to Rfam database...	0.54	0.57	0.52	47	41237	46	8	36	2	35
SRP_00345	-	0.28	0.31	0.26	16	20644	52	12	34	6	36
SRP_00347	Metazoa_SRP links to Rfam database...	0.83	0.82	0.84	79	46571	20	5	10	5	17
SRP_00348	-	0.49	0.45	0.53	44	46888	39	5	34	0	54
SRP_00353	-	0.89	0.83	0.95	83	37863	5	0	4	1	17
SRP_00354	-	0.73	0.71	0.75	66	38693	25	0	22	3	27
SRP_00355	-	0.84	0.82	0.86	79	41813	18	2	11	5	17
SRP_00361	Plant_SRP links to Rfam database...	0.68	0.67	0.69	60	41818	37	5	22	10	30
SRP_00368	Metazoa_SRP links to Rfam database...	0.94	0.91	0.98	89	43865	7	0	2	5	9
SRP_00371	Fungi_SRP links to Rfam database...	0.77	0.77	0.78	63	36234	22	2	16	4	19
TMR_00007	tmRNA links to Rfam database...	0.29	0.28	0.30	30	61677	74	11	58	5	78
TMR_00008	tmRNA links to Rfam database...	0.50	0.48	0.52	51	65967	59	10	38	11	55
TMR_00010	tmRNA links to Rfam database...	0.30	0.31	0.30	30	57869	71	14	57	0	66
TMR_00012	tmRNA links to Rfam database...	0.28	0.28	0.27	23	64536	76	20	41	15	58
TMR_00014	tmRNA links to Rfam database...	0.52	0.50	0.54	55	68533	54	12	35	7	55
TMR_00017	tmRNA links to Rfam database...	0.38	0.38	0.39	39	67060	68	15	47	6	63
TMR_00018	tmRNA links to Rfam database...	0.25	0.26	0.24	24	64521	81	11	64	6	68
TMR_00028	tmRNA links to Rfam database...	0.39	0.41	0.37	40	62726	72	15	54	3	57
TMR_00030	tmRNA links to Rfam database...	0.20	0.21	0.20	23	75741	96	12	79	5	88
TMR_00034	tmRNA links to Rfam database...	0.63	0.60	0.66	66	59931	41	6	28	7	44
TMR_00035	tmRNA links to Rfam database...	0.33	0.35	0.32	34	67791	76	9	62	5	64
TMR_00036	tmRNA links to Rfam database...	0.57	0.57	0.57	58	90424	72	11	32	29	43
TMR_00038	tmRNA links to Rfam database...	0.25	0.25	0.25	28	71142	87	12	71	4	82
TMR_00042	tmRNA links to Rfam database...	0.29	0.30	0.29	29	62736	73	8	62	3	69
TMR_00046	tmRNA links to Rfam database...	0.56	0.56	0.57	54	62740	47	7	34	6	42
TMR_00047	tmRNA links to Rfam database...	0.26	0.30	0.23	17	48442	73	16	41	16	40
TMR_00048	tmRNA links to Rfam database...	0.33	0.35	0.31	33	64874	78	9	64	5	62
TMR_00049	tmRNA links to Rfam database...	0.53	0.54	0.52	47	63099	56	9	35	12	40
TMR_00051	tmRNA links to Rfam database...	0.65	0.61	0.70	57	65621	44	2	23	19	37
TMR_00055	tmRNA links to Rfam database...	0.12	0.13	0.12	15	78874	114	25	89	0	99
TMR_00057	tmRNA links to Rfam database...	0.07	0.09	0.06	7	73812	109	31	70	8	72
TMR_00061	tmRNA links to Rfam database...	0.24	0.25	0.24	25	59580	87	11	69	7	74
TMR_00062	tmRNA links to Rfam database...	0.56	0.57	0.55	59	78499	63	8	40	15	45
TMR_00064	tmRNA links to Rfam database...	0.27	0.27	0.27	28	76923	77	20	57	0	75
TMR_00065	tmRNA links to Rfam database...	0.44	0.44	0.43	47	76527	63	12	50	1	59
TMR_00067	tmRNA links to Rfam database...	0.35	0.36	0.34	41	82095	83	11	68	4	73
TMR_00073	tmRNA links to Rfam database...	0.43	0.43	0.43	50	65588	65	5	60	0	67
TMR_00076	tmRNA links to Rfam database...	0.32	0.33	0.32	33	70772	77	14	57	6	67
TMR_00080	tmRNA links to Rfam database...	0.61	0.61	0.61	59	70403	41	10	28	3	37
TMR_00081	tmRNA links to Rfam database...	0.47	0.45	0.48	48	67062	52	12	39	1	58
TMR_00082	tmRNA links to Rfam database...	0.59	0.58	0.60	56	67802	43	12	26	5	40
TMR_00083	tmRNA links to Rfam database...	0.43	0.43	0.44	45	68162	66	15	43	8	60
TMR_00092	tmRNA links to Rfam database...	0.55	0.57	0.53	58	67418	56	14	38	4	43
TMR_00093	tmRNA links to Rfam database...	0.42	0.43	0.41	44	64153	66	14	50	2	58
TMR_00096	tmRNA links to Rfam database...	0.12	0.12	0.12	12	64882	94	16	70	8	88
TMR_00101	tmRNA links to Rfam database...	0.33	0.33	0.33	35	64155	76	10	61	5	72
TMR_00102	tmRNA links to Rfam database...	0.26	0.28	0.25	28	64150	86	16	67	3	73
TMR_00103	tmRNA links to Rfam database...	0.57	0.56	0.57	61	64154	50	8	38	4	47
TMR_00104	-	0.09	0.10	0.08	7	66702	92	33	53	6	63
TMR_00106	tmRNA links to Rfam database...	0.50	0.52	0.48	62	89970	72	16	52	4	58
TMR_00109	tmRNA links to Rfam database...	0.31	0.30	0.32	36	88298	79	15	61	3	86
TMR_00111	tmRNA links to Rfam database...	0.45	0.45	0.45	55	90403	71	12	55	4	67
TMR_00116	tmRNA links to Rfam database...	0.57	0.56	0.58	58	64880	54	5	37	12	46
TMR_00117	tmRNA links to Rfam database...	0.58	0.57	0.59	67	80086	56	8	39	9	51
TMR_00118	tmRNA links to Rfam database...	0.40	0.40	0.41	48	81288	77	8	62	7	72
TMR_00119	tmRNA links to Rfam database...	0.49	0.49	0.49	51	71905	60	8	46	6	53
TMR_00123	tmRNA links to Rfam database...	0.17	0.17	0.17	17	66327	92	11	75	6	84
TMR_00124	tmRNA links to Rfam database...	0.47	0.48	0.46	47	70397	70	15	41	14	51
TMR_00125	tmRNA links to Rfam database...	0.20	0.20	0.20	20	64159	86	17	65	4	79
TMR_00127	tmRNA links to Rfam database...	0.58	0.57	0.60	55	62743	43	9	28	6	42
TMR_00128	tmRNA links to Rfam database...	0.36	0.36	0.36	35	60979	61	11	50	0	61
TMR_00131	tmRNA links to Rfam database...	0.29	0.28	0.30	28	64886	73	12	54	7	71
TMR_00135	tmRNA links to Rfam database...	0.59	0.56	0.63	55	62747	43	4	29	10	44
TMR_00136	tmRNA links to Rfam database...	0.19	0.20	0.18	20	74581	93	21	69	3	81
TMR_00137	tmRNA links to Rfam database...	0.16	0.17	0.16	15	60979	89	14	67	8	74
TMR_00139	tmRNA links to Rfam database...	0.57	0.62	0.54	56	62024	55	18	30	7	35
TMR_00140	tmRNA links to Rfam database...	0.49	0.49	0.50	49	73822	65	10	39	16	51
TMR_00142	tmRNA links to Rfam database...	0.57	0.61	0.54	62	70761	53	21	32	0	40
TMR_00143	tmRNA links to Rfam database...	0.48	0.49	0.49	50	64517	63	9	44	10	53
TMR_00144	tmRNA links to Rfam database...	0.26	0.27	0.24	28	74189	90	15	73	2	75
TMR_00146	tmRNA links to Rfam database...	0.87	0.88	0.86	37	32088	34	2	4	28	5
TMR_00148	tmRNA links to Rfam database...	0.69	0.88	0.54	15	27702	49	9	4	36	2
TMR_00150	tmRNA links to Rfam database...	0.71	0.71	0.70	30	43028	52	3	10	39	12
TMR_00152	tmRNA links to Rfam database...	0.26	0.26	0.26	30	81291	96	10	75	11	85
TMR_00155	tmRNA links to Rfam database...	0.39	0.37	0.41	38	61683	64	5	50	9	66
TMR_00156	tmRNA links to Rfam database...	0.36	0.36	0.36	35	60282	61	12	49	0	62
TMR_00158	tmRNA links to Rfam database...	0.37	0.35	0.39	35	60637	60	5	49	6	64
TMR_00159	tmRNA links to Rfam database...	0.36	0.36	0.36	33	62036	70	13	46	11	59
TMR_00160	tmRNA links to Rfam database...	0.45	0.44	0.45	42	64527	59	13	38	8	53
TMR_00164	tmRNA links to Rfam database...	0.29	0.28	0.30	30	66696	77	10	59	8	76
TMR_00165	tmRNA links to Rfam database...	0.30	0.32	0.29	31	61669	85	12	64	9	66
TMR_00166	tmRNA links to Rfam database...	0.30	0.29	0.32	29	61685	65	7	55	3	72
TMR_00168	tmRNA links to Rfam database...	0.68	0.66	0.71	75	60969	36	3	28	5	39
TMR_00173	tmRNA links to Rfam database...	0.32	0.36	0.28	15	42142	64	16	22	26	27
TMR_00179	tmRNA links to Rfam database...	0.52	0.53	0.51	52	67060	60	10	39	11	46
TMR_00180	tmRNA links to Rfam database...	0.63	0.63	0.63	62	67063	49	8	28	13	37
TMR_00182	tmRNA links to Rfam database...	0.11	0.12	0.11	12	66322	100	13	83	4	90
TMR_00183	tmRNA links to Rfam database...	0.18	0.17	0.18	18	63090	87	6	76	5	85
TMR_00184	tmRNA links to Rfam database...	0.40	0.40	0.40	41	63087	64	4	58	2	61
TMR_00193	tmRNA links to Rfam database...	0.43	0.44	0.43	35	59258	56	12	35	9	45
TMR_00194	tmRNA links to Rfam database...	0.48	0.48	0.47	45	62740	61	10	40	11	48
TMR_00196	tmRNA links to Rfam database...	0.38	0.38	0.39	37	60979	64	8	51	5	60
TMR_00199	tmRNA links to Rfam database...	0.48	0.49	0.47	45	62739	58	21	30	7	47
TMR_00200	-	0.56	0.56	0.57	42	41542	42	3	29	10	33
TMR_00204	tmRNA links to Rfam database...	0.39	0.40	0.39	39	60277	68	16	46	6	58
TMR_00207	tmRNA links to Rfam database...	0.25	0.24	0.26	25	72292	80	6	67	7	78
TMR_00223	tmRNA links to Rfam database...	0.10	0.11	0.10	10	64165	90	15	71	4	85
TMR_00224	tmRNA links to Rfam database...	0.36	0.37	0.36	37	64876	67	11	56	0	64
TMR_00226	tmRNA links to Rfam database...	0.30	0.32	0.29	34	69632	86	16	69	1	71
TMR_00227	tmRNA links to Rfam database...	0.21	0.22	0.20	22	70013	93	11	79	3	79
TMR_00228	tmRNA links to Rfam database...	0.29	0.31	0.27	34	88283	98	24	69	5	74
TMR_00234	tmRNA links to Rfam database...	0.30	0.31	0.29	32	58887	81	8	69	4	70
TMR_00238	tmRNA links to Rfam database...	0.20	0.22	0.19	22	84551	99	23	70	6	79
TMR_00239	tmRNA links to Rfam database...	0.63	0.65	0.62	62	61676	40	7	31	2	34
TMR_00240	tmRNA links to Rfam database...	0.20	0.21	0.20	18	63098	77	15	59	3	67
TMR_00246	-	0.43	0.50	0.38	17	78165	113	6	22	85	17
TMR_00248	tmRNA links to Rfam database...	0.13	0.16	0.10	6	54226	87	25	28	34	32
TMR_00257	tmRNA links to Rfam database...	0.20	0.19	0.20	19	67068	78	8	66	4	79
TMR_00259	tmRNA links to Rfam database...	0.58	0.57	0.58	59	67795	45	13	29	3	44
TMR_00261	tmRNA links to Rfam database...	0.52	0.52	0.52	53	66694	53	14	34	5	48
TMR_00262	tmRNA links to Rfam database...	0.49	0.51	0.47	53	74192	60	19	41	0	51
TMR_00271	tmRNA links to Rfam database...	0.47	0.46	0.48	42	64173	54	7	39	8	49
TMR_00274	tmRNA links to Rfam database...	0.30	0.30	0.29	32	66684	84	13	66	5	73
TMR_00278	tmRNA links to Rfam database...	0.43	0.44	0.42	45	67789	71	7	55	9	57
TMR_00279	tmRNA links to Rfam database...	0.52	0.52	0.52	49	68912	55	7	38	10	45
TMR_00280	tmRNA links to Rfam database...	0.34	0.35	0.34	35	65963	81	8	60	13	66
TMR_00283	tmRNA links to Rfam database...	0.41	0.44	0.39	42	65234	68	19	46	3	54
TMR_00289	tmRNA links to Rfam database...	0.59	0.59	0.59	58	67063	52	11	29	12	40
TMR_00290	tmRNA links to Rfam database...	0.21	0.22	0.21	20	64164	85	15	62	8	72
TMR_00296	tmRNA links to Rfam database...	0.29	0.30	0.29	29	68907	78	18	52	8	69
TMR_00298	tmRNA links to Rfam database...	0.47	0.50	0.45	50	68153	66	16	46	4	51
TMR_00300	tmRNA links to Rfam database...	0.53	0.54	0.53	60	70387	63	9	44	10	52
TMR_00301	tmRNA links to Rfam database...	0.35	0.35	0.34	34	82116	74	21	44	9	62
TMR_00302	tmRNA links to Rfam database...	0.34	0.37	0.32	35	77311	82	20	55	7	59
TMR_00305	tmRNA links to Rfam database...	0.69	0.66	0.74	67	60984	32	5	19	8	35
TMR_00306	tmRNA links to Rfam database...	0.11	0.11	0.12	12	64158	93	9	82	2	94
TMR_00310	tmRNA links to Rfam database...	0.60	0.58	0.63	57	63812	38	9	25	4	41
TMR_00317	tmRNA links to Rfam database...	0.60	0.62	0.58	63	68156	49	14	32	3	39
TMR_00331	tmRNA links to Rfam database...	0.50	0.54	0.46	44	66699	66	8	44	14	38
TMR_00332	tmRNA links to Rfam database...	0.28	0.27	0.29	27	67067	71	14	53	4	72
TMR_00334	tmRNA links to Rfam database...	0.28	0.28	0.28	28	66696	79	10	61	8	73
TMR_00337	tmRNA links to Rfam database...	0.55	0.53	0.57	63	82918	51	14	33	4	56
TMR_00340	tmRNA links to Rfam database...	0.37	0.38	0.36	31	64176	74	5	49	20	50
TMR_00341	tmRNA links to Rfam database...	0.20	0.22	0.19	20	63084	89	23	63	3	72
TMR_00343	tmRNA links to Rfam database...	0.32	0.30	0.33	32	64884	72	12	52	8	73
TMR_00345	tmRNA links to Rfam database...	0.47	0.46	0.48	48	63803	60	9	43	8	56
TMR_00346	tmRNA links to Rfam database...	0.49	0.51	0.47	48	64158	57	15	40	2	46
TMR_00348	tmRNA links to Rfam database...	0.23	0.23	0.22	23	77317	98	13	68	17	76
TMR_00352	tmRNA links to Rfam database...	0.39	0.41	0.36	31	95181	92	18	36	38	44
TMR_00353	tmRNA links to Rfam database...	0.51	0.53	0.49	56	84140	68	21	38	9	49
TMR_00357	tmRNA links to Rfam database...	0.40	0.41	0.40	38	82932	75	20	38	17	54
TMR_00358	tmRNA links to Rfam database...	0.61	0.60	0.62	59	74983	54	17	19	18	40
TMR_00361	-	0.29	0.35	0.25	25	93427	94	26	50	18	47
TMR_00366	tmRNA links to Rfam database...	0.31	0.30	0.31	30	67800	79	10	56	13	70
TMR_00372	tmRNA links to Rfam database...	0.58	0.59	0.58	57	70401	53	7	35	11	39
TMR_00374	tmRNA links to Rfam database...	0.37	0.40	0.34	37	81701	77	24	48	5	55
TMR_00375	tmRNA links to Rfam database...	0.47	0.48	0.46	47	73433	66	17	39	10	51
TMR_00376	tmRNA links to Rfam database...	0.46	0.46	0.45	44	74594	70	17	36	17	51
TMR_00378	tmRNA links to Rfam database...	0.29	0.30	0.28	29	67792	86	7	68	11	68
TMR_00383	tmRNA links to Rfam database...	0.20	0.21	0.19	21	66686	96	20	68	8	79
TMR_00384	tmRNA links to Rfam database...	0.33	0.31	0.36	34	65608	68	2	59	7	74
TMR_00393	tmRNA links to Rfam database...	0.57	0.62	0.52	33	53238	56	13	17	26	20
TMR_00395	tmRNA links to Rfam database...	0.39	0.37	0.42	40	64524	60	6	50	4	69
TMR_00398	tmRNA links to Rfam database...	0.67	0.64	0.70	68	65244	35	2	27	6	38
TMR_00399	tmRNA links to Rfam database...	0.29	0.31	0.28	29	64875	80	23	53	4	65
TMR_00404	tmRNA links to Rfam database...	0.21	0.23	0.20	21	67425	94	23	59	12	71
TMR_00408	tmRNA links to Rfam database...	0.63	0.65	0.61	57	65972	48	13	24	11	31
TMR_00409	tmRNA links to Rfam database...	0.69	0.74	0.64	34	68582	73	7	12	54	12
TMR_00411	tmRNA links to Rfam database...	0.51	0.52	0.50	45	60985	50	12	33	5	42
TMR_00415	tmRNA links to Rfam database...	0.35	0.35	0.35	35	67062	67	13	51	3	66
TMR_00419	tmRNA links to Rfam database...	0.33	0.32	0.35	35	81709	84	9	57	18	76
TMR_00422	tmRNA links to Rfam database...	0.52	0.52	0.52	48	67803	54	10	35	9	44
TMR_00423	tmRNA links to Rfam database...	0.08	0.10	0.07	7	63799	106	25	72	9	66
TMR_00427	tmRNA links to Rfam database...	0.33	0.33	0.33	32	67430	69	11	55	3	65
TMR_00429	tmRNA links to Rfam database...	0.50	0.48	0.52	52	74591	57	7	41	9	57
TMR_00430	tmRNA links to Rfam database...	0.29	0.30	0.28	33	82502	86	20	66	0	76
TMR_00431	tmRNA links to Rfam database...	0.68	0.69	0.68	38	51947	63	8	10	45	17
TMR_00432	tmRNA links to Rfam database...	0.21	0.22	0.20	23	79687	96	17	73	6	81
TMR_00433	tmRNA links to Rfam database...	0.31	0.32	0.31	34	80089	82	10	67	5	72
TMR_00439	tmRNA links to Rfam database...	0.39	0.42	0.38	42	68523	80	21	49	10	59
TMR_00441	tmRNA links to Rfam database...	0.14	0.16	0.13	13	62028	95	24	63	8	70
TMR_00443	tmRNA links to Rfam database...	0.37	0.38	0.36	39	67053	71	13	56	2	65
TMR_00448	tmRNA links to Rfam database...	0.31	0.33	0.30	30	62028	76	12	58	6	62
TMR_00451	tmRNA links to Rfam database...	0.22	0.24	0.21	21	63448	83	14	63	6	68
TMR_00457	tmRNA links to Rfam database...	0.55	0.54	0.56	55	78507	51	10	34	7	47
TMR_00458	tmRNA links to Rfam database...	0.15	0.15	0.15	14	63450	89	19	63	7	79
TMR_00460	tmRNA links to Rfam database...	0.43	0.44	0.43	47	79291	71	13	50	8	59
TMR_00465	tmRNA links to Rfam database...	0.24	0.26	0.23	24	64155	82	23	59	0	70
TMR_00469	tmRNA links to Rfam database...	0.40	0.41	0.39	41	64514	65	11	54	0	59
TMR_00472	tmRNA links to Rfam database...	0.33	0.33	0.33	32	64523	77	10	55	12	65
TMR_00478	tmRNA links to Rfam database...	0.44	0.45	0.42	45	71904	67	15	46	6	54
TMR_00498	tmRNA links to Rfam database...	0.46	0.45	0.46	45	68909	63	10	42	11	54
TMR_00499	tmRNA links to Rfam database...	0.20	0.21	0.18	21	64506	100	10	83	7	78
TMR_00501	tmRNA links to Rfam database...	0.37	0.37	0.37	34	62390	62	9	48	5	58
TMR_00502	tmRNA links to Rfam database...	0.22	0.24	0.21	22	75360	93	20	64	9	71
TMR_00503	tmRNA links to Rfam database...	0.34	0.33	0.35	37	67790	76	5	64	7	74
TMR_00519	tmRNA links to Rfam database...	0.19	0.20	0.18	19	63084	97	18	69	10	76
TMR_00520	tmRNA links to Rfam database...	0.46	0.46	0.46	46	63090	64	12	42	10	53
TMR_00522	tmRNA links to Rfam database...	0.36	0.36	0.36	35	63094	70	11	50	9	62
TMR_00528	tmRNA links to Rfam database...	0.30	0.31	0.29	30	63086	84	20	54	10	67
TMR_00540	tmRNA links to Rfam database...	0.42	0.41	0.43	43	73435	66	10	48	8	61
TMR_00541	tmRNA links to Rfam database...	0.42	0.41	0.43	43	61676	65	3	54	8	62
TMR_00544	tmRNA links to Rfam database...	0.31	0.31	0.30	34	89563	85	23	56	6	74
TMR_00547	tmRNA links to Rfam database...	0.50	0.50	0.51	50	65243	50	4	44	2	50
TMR_00553	tmRNA links to Rfam database...	0.44	0.43	0.44	35	48126	50	4	40	6	46
TMR_00559	tmRNA links to Rfam database...	0.41	0.40	0.43	40	62388	57	9	44	4	61
TMR_00560	tmRNA links to Rfam database...	0.40	0.40	0.40	39	60978	67	6	52	9	59
TMR_00562	tmRNA links to Rfam database...	0.26	0.26	0.26	27	72667	85	13	64	8	75
TMR_00563	tmRNA links to Rfam database...	0.37	0.39	0.35	40	75352	81	19	55	7	63
TMR_00566	tmRNA links to Rfam database...	0.25	0.25	0.24	25	60623	82	12	66	4	75
TMR_00568	tmRNA links to Rfam database...	0.35	0.34	0.37	34	60633	65	9	50	6	65
TMR_00570	tmRNA links to Rfam database...	0.37	0.37	0.38	36	60282	70	8	52	10	61
TMR_00571	tmRNA links to Rfam database...	0.32	0.32	0.32	32	60626	75	12	56	7	67
TMR_00576	tmRNA links to Rfam database...	0.29	0.28	0.30	29	60282	72	16	51	5	73
TMR_00579	tmRNA links to Rfam database...	0.23	0.26	0.21	23	80489	98	19	70	9	67
TMR_00580	tmRNA links to Rfam database...	0.26	0.26	0.25	26	60624	77	19	57	1	74
TMR_00581	tmRNA links to Rfam database...	0.14	0.14	0.13	14	62374	100	11	82	7	84
TMR_00584	tmRNA links to Rfam database...	0.52	0.51	0.53	49	60982	55	7	37	11	48
TMR_00586	tmRNA links to Rfam database...	0.23	0.25	0.22	24	60965	87	18	68	1	73
TMR_00587	tmRNA links to Rfam database...	0.72	0.70	0.74	70	61330	30	4	21	5	30
TMR_00588	tmRNA links to Rfam database...	0.21	0.22	0.20	22	77312	96	20	67	9	79
TMR_00594	tmRNA links to Rfam database...	0.21	0.22	0.21	23	79291	91	20	67	4	81
TMR_00596	tmRNA links to Rfam database...	0.16	0.17	0.15	16	78106	98	15	73	10	79
TMR_00599	tmRNA links to Rfam database...	0.16	0.18	0.14	13	63097	90	28	52	10	59
TMR_00600	tmRNA links to Rfam database...	0.18	0.18	0.19	21	79687	94	18	74	2	94
TMR_00601	tmRNA links to Rfam database...	0.46	0.48	0.45	20	58952	81	2	22	57	22
TMR_00603	tmRNA links to Rfam database...	0.55	0.56	0.55	24	60334	76	7	13	56	19
TMR_00604	tmRNA links to Rfam database...	0.65	0.63	0.67	70	62731	38	3	31	4	42
TMR_00605	tmRNA links to Rfam database...	0.54	0.52	0.57	56	74207	49	11	31	7	52
TMR_00606	tmRNA links to Rfam database...	0.38	0.38	0.38	41	68897	73	7	61	5	66
TMR_00609	tmRNA links to Rfam database...	0.63	0.61	0.64	69	63439	40	8	30	2	44
TMR_00610	tmRNA links to Rfam database...	0.57	0.57	0.57	59	62024	57	7	38	12	45
TMR_00611	tmRNA links to Rfam database...	0.43	0.45	0.41	46	61314	65	16	49	0	56
TMR_00612	tmRNA links to Rfam database...	0.41	0.41	0.41	43	60620	69	7	56	6	61
TMR_00614	tmRNA links to Rfam database...	0.55	0.53	0.58	55	60980	49	3	37	9	49
TMR_00615	tmRNA links to Rfam database...	0.56	0.58	0.53	56	63798	52	19	30	3	40
TMR_00616	tmRNA links to Rfam database...	0.35	0.34	0.35	34	67064	68	14	49	5	65
TMR_00617	tmRNA links to Rfam database...	0.38	0.41	0.35	24	34648	54	12	32	10	34
TMR_00623	tmRNA links to Rfam database...	0.39	0.37	0.42	40	61329	60	2	54	4	68
TMR_00624	tmRNA links to Rfam database...	0.48	0.47	0.49	51	62377	65	5	48	12	57
TMR_00625	tmRNA links to Rfam database...	0.22	0.23	0.21	24	78890	93	28	61	4	82
TMR_00626	tmRNA links to Rfam database...	0.37	0.39	0.36	42	67780	78	17	57	4	67
TMR_00680	tmRNA links to Rfam database...	0.20	0.21	0.20	21	67790	94	18	67	9	78
TMR_00681	tmRNA links to Rfam database...	0.56	0.55	0.58	53	65974	49	5	34	10	44
TMR_00683	tmRNA links to Rfam database...	0.33	0.35	0.32	35	82919	78	17	57	4	65
TMR_00686	tmRNA links to Rfam database...	0.45	0.45	0.45	49	71145	70	14	45	11	59
TMR_00687	tmRNA links to Rfam database...	0.37	0.35	0.38	39	71529	73	4	59	10	72
TMR_00696	tmRNA links to Rfam database...	0.33	0.33	0.33	38	84962	95	12	66	17	76
TMR_00698	tmRNA links to Rfam database...	0.56	0.55	0.58	57	63092	44	7	34	3	47
TMR_00699	tmRNA links to Rfam database...	0.39	0.37	0.40	38	67066	61	7	50	4	64
TMR_00702	tmRNA links to Rfam database...	0.19	0.19	0.20	19	67065	80	17	60	3	81
TMR_00703	tmRNA links to Rfam database...	0.36	0.36	0.37	36	67430	67	12	50	5	63
TMR_00706	tmRNA links to Rfam database...	0.53	0.52	0.53	54	66328	52	6	42	4	49
TMR_00711	tmRNA links to Rfam database...	0.55	0.54	0.55	53	67800	50	13	30	7	45
TMR_00712	tmRNA links to Rfam database...	0.38	0.39	0.38	43	78492	73	22	49	2	66
TMR_00716	tmRNA links to Rfam database...	0.19	0.19	0.19	19	62737	79	15	64	0	81

^top

Performance of RNAsubopt - scored lower in this pairwise comparison

1. Total counts & total scores for RNAsubopt

Total Base Pair Counts
Total TP	37548
Total TN	44924659
Total FP	44042
Total FP CONTRA	6717
Total FP INCONS	31650
Total FP COMP	5675
Total FN	36146

Total Scores
MCC	0.501
Average MCC ± 95% Confidence Intervals	0.502 ± 0.014
Sensitivity	0.510
Positive Predictive Value	0.495
Nr of predictions	759

^top

2. Individual counts for RNAsubopt [ download as .csv ]

RNA Chain	Rfam family	MCC	SENS	PPV	TP	TN	FP	FP CONTRA	FP INCONS	FP COMP	FN
ASE_00001	RNaseP_arch links to Rfam database...	0.74	0.73	0.74	55	34117	26	4	15	7	20
ASE_00002	RNaseP_arch links to Rfam database...	0.63	0.62	0.64	45	35441	30	4	21	5	28
ASE_00004	RNaseP_bact_a links to Rfam database...	0.78	0.78	0.78	76	47798	22	2	19	1	21
ASE_00005	RNaseP_bact_a links to Rfam database...	0.55	0.53	0.57	62	57861	51	2	45	4	55
ASE_00006	RNaseP_bact_a links to Rfam database...	0.55	0.56	0.54	52	47489	46	5	40	1	41
ASE_00007	RNaseP_bact_a links to Rfam database...	0.37	0.37	0.37	41	59575	71	1	68	2	69
ASE_00009	RNaseP_arch links to Rfam database...	0.71	0.70	0.72	47	26041	21	3	15	3	20
ASE_00010	RNaseP_bact_b links to Rfam database...	0.52	0.55	0.49	45	49679	54	10	36	8	37
ASE_00012	RNaseP_bact_a links to Rfam database...	0.44	0.43	0.44	53	73800	71	10	57	4	70
ASE_00014	RNaseP_arch links to Rfam database...	0.42	0.43	0.42	46	54175	67	10	54	3	60
ASE_00016	-	0.62	0.62	0.62	38	66005	90	3	20	67	23
ASE_00017	RNaseP_nuc links to Rfam database...	0.30	0.34	0.26	22	50955	83	20	43	20	42
ASE_00018	RNaseP_bact_a links to Rfam database...	0.67	0.64	0.70	86	80479	39	1	35	3	48
ASE_00020	RNaseP_bact_a links to Rfam database...	0.47	0.47	0.47	59	73795	66	10	56	0	67
ASE_00021	RNaseP_bact_a links to Rfam database...	0.56	0.54	0.58	86	104048	66	9	53	4	74
ASE_00022	RNaseP_bact_b links to Rfam database...	0.47	0.48	0.47	59	82903	73	6	60	7	65
ASE_00023	RNaseP_bact_a links to Rfam database...	0.56	0.57	0.56	72	84127	60	5	51	4	55
ASE_00024	-	0.74	0.70	0.78	49	29340	26	3	11	12	21
ASE_00025	RNaseP_nuc links to Rfam database...	0.24	0.28	0.20	20	78506	124	21	59	44	51
ASE_00026	RNaseP_bact_a links to Rfam database...	0.52	0.51	0.53	56	59580	57	1	48	8	54
ASE_00028	RNaseP_bact_b links to Rfam database...	0.70	0.67	0.72	85	84548	42	6	27	9	41
ASE_00029	RNaseP_bact_a links to Rfam database...	0.36	0.36	0.35	44	82904	82	15	65	2	78
ASE_00030	RNaseP_bact_a links to Rfam database...	0.64	0.62	0.66	90	85355	46	5	41	0	55
ASE_00031	RNaseP_bact_a links to Rfam database...	0.55	0.55	0.56	69	86612	61	3	52	6	57
ASE_00032	RNaseP_bact_a links to Rfam database...	0.60	0.60	0.60	71	80082	55	3	44	8	47
ASE_00033	RNaseP_bact_a links to Rfam database...	0.50	0.45	0.54	55	64879	47	3	43	1	66
ASE_00035	RNaseP_bact_a links to Rfam database...	0.37	0.36	0.38	42	70389	76	11	58	7	76
ASE_00036	RNaseP_bact_a links to Rfam database...	0.46	0.45	0.48	59	75731	68	8	57	3	73
ASE_00037	RNaseP_bact_a links to Rfam database...	0.42	0.40	0.45	44	59242	57	1	53	3	66
ASE_00038	RNaseP_bact_a links to Rfam database...	0.51	0.50	0.52	51	53529	49	3	45	1	50
ASE_00040	RNaseP_bact_a links to Rfam database...	0.36	0.35	0.37	47	78876	88	4	76	8	86
ASE_00041	RNaseP_bact_a links to Rfam database...	0.54	0.53	0.56	57	57528	50	2	43	5	51
ASE_00042	RNaseP_bact_a links to Rfam database...	0.60	0.57	0.63	83	89968	50	4	45	1	62
ASE_00044	RNaseP_bact_a links to Rfam database...	0.69	0.70	0.70	73	54510	36	3	29	4	32
ASE_00045	RNaseP_bact_b links to Rfam database...	0.67	0.68	0.66	54	47196	36	7	21	8	26
ASE_00046	RNaseP_bact_a links to Rfam database...	0.51	0.50	0.53	52	50304	47	3	44	0	51
ASE_00047	RNaseP_bact_a links to Rfam database...	0.34	0.32	0.36	42	74188	76	5	70	1	88
ASE_00052	RNaseP_bact_a links to Rfam database...	0.50	0.46	0.54	52	61329	49	2	42	5	60
ASE_00053	RNaseP_bact_a links to Rfam database...	0.49	0.48	0.51	64	79275	68	7	55	6	69
ASE_00056	-	0.36	0.36	0.36	26	30803	51	5	42	4	46
ASE_00057	RNaseP_bact_a links to Rfam database...	0.63	0.62	0.65	83	82087	50	9	36	5	51
ASE_00064	RNaseP_bact_a links to Rfam database...	0.36	0.38	0.35	34	45353	68	8	56	4	55
ASE_00066	RNaseP_bact_a links to Rfam database...	0.45	0.42	0.49	55	72278	59	2	55	2	75
ASE_00068	RNaseP_bact_a links to Rfam database...	0.54	0.52	0.56	44	37597	35	0	34	1	41
ASE_00069	RNaseP_bact_a links to Rfam database...	0.67	0.65	0.70	91	82898	46	5	34	7	49
ASE_00074	RNaseP_bact_a links to Rfam database...	0.58	0.58	0.58	69	67777	50	6	44	0	50
ASE_00075	RNaseP_bact_a links to Rfam database...	0.67	0.62	0.72	101	108670	45	4	36	5	61
ASE_00076	RNaseP_bact_a links to Rfam database...	0.54	0.52	0.56	61	68156	48	5	43	0	57
ASE_00077	RNaseP_bact_a links to Rfam database...	0.28	0.28	0.28	24	45065	66	8	53	5	62
ASE_00078	RNaseP_bact_a links to Rfam database...	0.69	0.69	0.69	57	42988	31	5	21	5	26
ASE_00079	RNaseP_bact_a links to Rfam database...	0.53	0.52	0.54	52	55515	44	5	39	0	48
ASE_00080	RNaseP_bact_a links to Rfam database...	0.42	0.41	0.44	51	71514	69	8	58	3	72
ASE_00081	RNaseP_bact_a links to Rfam database...	0.57	0.55	0.60	53	49681	41	0	36	5	44
ASE_00082	RNaseP_bact_a links to Rfam database...	0.45	0.44	0.46	51	70389	70	5	55	10	65
ASE_00083	RNaseP_bact_a links to Rfam database...	0.76	0.74	0.78	81	62377	30	2	21	7	29
ASE_00084	RNaseP_bact_a links to Rfam database...	0.60	0.60	0.61	59	53532	45	2	35	8	40
ASE_00087	RNaseP_bact_a links to Rfam database...	0.54	0.50	0.59	72	88288	58	3	47	8	72
ASE_00089	-	0.56	0.53	0.60	42	31305	32	2	26	4	37
ASE_00090	RNaseP_bact_a links to Rfam database...	0.53	0.54	0.51	55	55503	57	4	49	4	46
ASE_00092	RNaseP_bact_a links to Rfam database...	0.73	0.73	0.73	82	63433	36	4	27	5	31
ASE_00096	RNaseP_bact_a links to Rfam database...	0.57	0.56	0.58	64	63436	47	4	42	1	51
ASE_00099	RNaseP_bact_a links to Rfam database...	0.65	0.63	0.67	75	64508	42	2	35	5	45
ASE_00100	RNaseP_nuc links to Rfam database...	0.17	0.18	0.16	14	82128	125	10	63	52	62
ASE_00102	RNaseP_bact_a links to Rfam database...	0.40	0.39	0.41	64	117699	95	10	82	3	102
ASE_00104	RNaseP_bact_a links to Rfam database...	0.54	0.51	0.58	61	64155	49	3	42	4	58
ASE_00105	RNaseP_bact_a links to Rfam database...	0.31	0.31	0.31	34	64151	81	9	67	5	77
ASE_00107	RNaseP_bact_a links to Rfam database...	0.66	0.63	0.69	80	73037	39	1	35	3	47
ASE_00108	RNaseP_nuc links to Rfam database...	0.55	0.57	0.52	36	46902	66	6	27	33	27
ASE_00111	RNaseP_nuc links to Rfam database...	0.27	0.33	0.21	19	49997	81	31	39	11	38
ASE_00112	RNaseP_bact_a links to Rfam database...	0.61	0.60	0.61	70	75352	50	11	33	6	46
ASE_00114	RNaseP_bact_b links to Rfam database...	0.37	0.35	0.39	27	45381	54	6	37	11	50
ASE_00115	RNaseP_bact_a links to Rfam database...	0.62	0.62	0.62	63	54514	45	4	34	7	38
ASE_00116	RNaseP_arch links to Rfam database...	0.25	0.26	0.25	17	31557	55	10	42	3	49
ASE_00118	RNaseP_bact_a links to Rfam database...	0.55	0.55	0.55	56	60625	52	3	42	7	46
ASE_00119	RNaseP_bact_a links to Rfam database...	0.71	0.72	0.70	78	62723	36	4	30	2	30
ASE_00120	RNaseP_arch links to Rfam database...	0.48	0.49	0.47	46	46874	51	7	44	0	48
ASE_00121	RNaseP_arch links to Rfam database...	0.31	0.33	0.31	30	45052	70	9	59	2	62
ASE_00122	RNaseP_bact_a links to Rfam database...	0.19	0.19	0.19	17	43274	75	2	72	1	71
ASE_00123	RNaseP_bact_a links to Rfam database...	0.56	0.54	0.59	46	38425	37	2	30	5	39
ASE_00125	RNaseP_bact_a links to Rfam database...	0.63	0.63	0.64	55	39254	36	5	26	5	33
ASE_00126	RNaseP_bact_a links to Rfam database...	0.78	0.80	0.76	66	40383	28	4	17	7	16
ASE_00128	RNaseP_bact_a links to Rfam database...	0.70	0.69	0.70	69	53203	37	3	26	8	31
ASE_00129	RNaseP_bact_a links to Rfam database...	0.75	0.74	0.75	82	62726	30	3	24	3	29
ASE_00131	RNaseP_bact_a links to Rfam database...	0.56	0.51	0.61	43	39270	37	1	26	10	42
ASE_00132	RNaseP_bact_a links to Rfam database...	0.47	0.47	0.47	45	50308	52	6	44	2	50
ASE_00134	RNaseP_bact_a links to Rfam database...	0.34	0.34	0.35	32	50311	65	4	56	5	63
ASE_00135	RNaseP_bact_a links to Rfam database...	0.45	0.45	0.45	49	63081	66	9	51	6	60
ASE_00136	RNaseP_bact_a links to Rfam database...	0.52	0.51	0.54	47	48118	49	1	39	9	45
ASE_00137	RNaseP_bact_a links to Rfam database...	0.56	0.55	0.58	54	48423	45	3	36	6	44
ASE_00138	RNaseP_bact_a links to Rfam database...	0.56	0.54	0.58	44	40394	32	0	32	0	37
ASE_00139	RNaseP_bact_a links to Rfam database...	0.72	0.67	0.77	70	54194	27	1	20	6	34
ASE_00140	RNaseP_bact_a links to Rfam database...	0.56	0.53	0.59	66	70765	45	6	39	0	59
ASE_00142	RNaseP_bact_a links to Rfam database...	0.49	0.48	0.50	59	67044	60	7	51	2	63
ASE_00144	-	0.47	0.47	0.46	46	58211	58	6	48	4	51
ASE_00145	RNaseP_arch links to Rfam database...	0.46	0.46	0.46	51	70015	66	7	52	7	60
ASE_00146	RNaseP_bact_a links to Rfam database...	0.56	0.53	0.60	66	70766	50	1	43	6	58
ASE_00148	RNaseP_arch links to Rfam database...	0.60	0.60	0.61	92	112425	61	6	52	3	62
ASE_00151	RNaseP_bact_a links to Rfam database...	0.27	0.27	0.28	26	51911	66	11	55	0	72
ASE_00153	RNaseP_nuc links to Rfam database...	0.67	0.68	0.66	50	57554	66	2	24	40	23
ASE_00154	RNaseP_arch links to Rfam database...	0.63	0.64	0.64	68	65234	42	4	35	3	39
ASE_00155	RNaseP_arch links to Rfam database...	0.54	0.54	0.54	76	93388	70	5	59	6	66
ASE_00159	-	0.61	0.61	0.61	37	34919	54	5	19	30	24
ASE_00160	-	0.82	0.82	0.82	41	23821	31	0	9	22	9
ASE_00161	RNaseP_bact_b links to Rfam database...	0.32	0.33	0.32	29	53536	71	10	53	8	58
ASE_00163	RNaseP_bact_a links to Rfam database...	0.39	0.39	0.39	36	53209	65	6	50	9	57
ASE_00165	RNaseP_bact_a links to Rfam database...	0.66	0.64	0.68	65	52879	32	5	26	1	36
ASE_00168	RNaseP_nuc links to Rfam database...	0.16	0.20	0.13	13	60628	105	25	60	20	51
ASE_00169	RNaseP_bact_a links to Rfam database...	0.68	0.66	0.70	71	57189	35	5	26	4	36
ASE_00170	RNaseP_bact_a links to Rfam database...	0.67	0.66	0.69	61	48739	35	2	26	7	32
ASE_00171	RNaseP_bact_a links to Rfam database...	0.66	0.67	0.66	63	48420	33	5	28	0	31
ASE_00172	RNaseP_bact_a links to Rfam database...	0.62	0.63	0.60	67	58885	44	5	39	0	39
ASE_00174	RNaseP_bact_a links to Rfam database...	0.52	0.51	0.52	56	60967	54	6	46	2	53
ASE_00175	RNaseP_bact_a links to Rfam database...	0.65	0.64	0.67	68	59929	40	3	31	6	39
ASE_00176	RNaseP_bact_a links to Rfam database...	0.55	0.53	0.58	58	59931	45	4	38	3	52
ASE_00179	RNaseP_bact_a links to Rfam database...	0.66	0.68	0.64	57	44164	32	7	25	0	27
ASE_00180	RNaseP_bact_a links to Rfam database...	0.65	0.64	0.65	64	51262	39	3	31	5	36
ASE_00181	RNaseP_bact_a links to Rfam database...	0.54	0.55	0.54	58	57523	53	4	45	4	48
ASE_00182	RNaseP_bact_a links to Rfam database...	0.48	0.47	0.49	64	84125	66	4	62	0	72
ASE_00183	RNaseP_bact_a links to Rfam database...	0.73	0.73	0.73	82	61313	35	3	27	5	31
ASE_00184	RNaseP_bact_a links to Rfam database...	0.62	0.64	0.61	65	54509	41	10	31	0	37
ASE_00185	RNaseP_bact_a links to Rfam database...	0.69	0.66	0.71	85	73416	38	7	28	3	43
ASE_00186	RNaseP_bact_a links to Rfam database...	0.75	0.73	0.78	97	78878	34	3	25	6	35
ASE_00187	RNaseP_arch links to Rfam database...	0.44	0.44	0.44	51	68520	69	8	56	5	64
ASE_00189	RNaseP_bact_b links to Rfam database...	0.58	0.57	0.60	58	63093	46	9	30	7	44
ASE_00190	RNaseP_bact_b links to Rfam database...	0.57	0.56	0.58	50	45365	42	7	29	6	40
ASE_00191	RNaseP_arch links to Rfam database...	0.65	0.66	0.65	40	29584	27	3	19	5	21
ASE_00192	RNaseP_bact_b links to Rfam database...	0.28	0.26	0.30	35	84548	91	6	77	8	98
ASE_00194	RNaseP_bact_b links to Rfam database...	0.56	0.55	0.56	66	73418	56	13	39	4	53
ASE_00195	-	0.59	0.58	0.60	77	86191	57	3	49	5	56
ASE_00196	RNaseP_arch links to Rfam database...	0.74	0.73	0.75	55	31553	22	2	16	4	20
ASE_00197	RNaseP_bact_a links to Rfam database...	0.68	0.66	0.71	95	89120	42	3	35	4	50
ASE_00198	RNaseP_bact_a links to Rfam database...	0.65	0.65	0.65	66	52549	41	6	29	6	36
ASE_00203	RNaseP_bact_a links to Rfam database...	0.76	0.75	0.77	72	46571	25	4	18	3	24
ASE_00204	RNaseP_bact_b links to Rfam database...	0.63	0.61	0.65	68	67792	41	7	29	5	44
ASE_00205	RNaseP_arch links to Rfam database...	0.46	0.47	0.46	42	45964	54	8	42	4	48
ASE_00209	RNaseP_arch links to Rfam database...	0.40	0.39	0.41	34	42989	48	5	43	0	54
ASE_00210	RNaseP_arch links to Rfam database...	0.47	0.48	0.47	31	27195	36	7	28	1	34
ASE_00212	RNaseP_bact_a links to Rfam database...	0.67	0.65	0.69	96	93822	48	4	39	5	52
ASE_00213	RNaseP_arch links to Rfam database...	0.73	0.73	0.73	48	27195	19	6	12	1	18
ASE_00214	RNaseP_bact_a links to Rfam database...	0.73	0.71	0.74	73	56182	32	4	21	7	30
ASE_00215	RNaseP_bact_a links to Rfam database...	0.40	0.38	0.42	38	48425	53	2	51	0	61
ASE_00216	RNaseP_bact_a links to Rfam database...	0.61	0.62	0.59	51	39254	36	7	28	1	31
ASE_00217	RNaseP_bact_a links to Rfam database...	0.42	0.39	0.46	35	40394	48	3	38	7	55
ASE_00221	RNaseP_bact_a links to Rfam database...	0.54	0.52	0.55	61	64510	53	1	48	4	56
ASE_00222	RNaseP_arch links to Rfam database...	0.46	0.46	0.46	72	111946	83	12	71	0	85
ASE_00227	RNaseP_bact_a links to Rfam database...	0.44	0.44	0.45	58	78874	72	11	60	1	75
ASE_00228	RNaseP_bact_a links to Rfam database...	0.60	0.63	0.58	54	46878	39	14	25	0	32
ASE_00229	RNaseP_bact_a links to Rfam database...	0.73	0.72	0.73	63	42400	28	5	18	5	24
ASE_00231	RNaseP_bact_a links to Rfam database...	0.65	0.67	0.64	64	47795	36	5	31	0	32
ASE_00232	RNaseP_bact_a links to Rfam database...	0.62	0.62	0.62	52	38419	33	4	28	1	32
ASE_00234	RNaseP_bact_a links to Rfam database...	0.36	0.34	0.38	44	75350	76	7	65	4	85
ASE_00237	RNaseP_nuc links to Rfam database...	0.00	0.00	0.00	0	45663	101	25	65	11	56
ASE_00238	RNaseP_bact_a links to Rfam database...	0.42	0.42	0.42	48	64146	70	6	61	3	66
ASE_00240	RNaseP_bact_a links to Rfam database...	0.66	0.65	0.67	60	46575	37	3	27	7	33
ASE_00241	RNaseP_bact_a links to Rfam database...	0.51	0.53	0.49	46	43862	48	10	38	0	41
ASE_00242	RNaseP_bact_a links to Rfam database...	0.46	0.46	0.47	51	60966	60	5	53	2	61
ASE_00245	RNaseP_nuc links to Rfam database...	0.90	0.87	0.93	68	55205	42	0	5	37	10
ASE_00246	RNaseP_nuc links to Rfam database...	0.29	0.34	0.25	23	48114	75	26	42	7	44
ASE_00247	RNaseP_nuc links to Rfam database...	0.17	0.19	0.15	12	54205	97	19	49	29	52
ASE_00248	RNaseP_bact_a links to Rfam database...	0.60	0.59	0.62	67	62373	45	1	40	4	47
ASE_00250	RNaseP_bact_a links to Rfam database...	0.82	0.82	0.83	107	78874	25	4	18	3	24
ASE_00252	RNaseP_bact_a links to Rfam database...	0.57	0.56	0.59	94	115281	70	8	57	5	74
ASE_00254	RNaseP_bact_a links to Rfam database...	0.41	0.40	0.42	33	36777	50	4	42	4	49
ASE_00255	RNaseP_bact_a links to Rfam database...	0.68	0.65	0.71	85	74571	41	3	32	6	45
ASE_00257	RNaseP_bact_a links to Rfam database...	0.56	0.56	0.57	54	50945	50	4	37	9	43
ASE_00258	RNaseP_nuc links to Rfam database...	0.60	0.63	0.57	34	26736	32	11	15	6	20
ASE_00259	RNaseP_bact_a links to Rfam database...	0.42	0.40	0.44	48	73043	65	9	53	3	73
ASE_00263	RNaseP_bact_a links to Rfam database...	0.76	0.77	0.76	92	70379	31	7	22	2	28
ASE_00264	RNaseP_nuc links to Rfam database...	0.81	0.75	0.87	75	49055	21	0	11	10	25
ASE_00267	RNaseP_bact_a links to Rfam database...	0.60	0.57	0.63	50	45071	37	4	25	8	38
ASE_00270	RNaseP_bact_a links to Rfam database...	0.74	0.71	0.76	91	72271	35	1	27	7	37
ASE_00274	RNaseP_bact_a links to Rfam database...	0.50	0.50	0.50	51	55510	50	10	40	0	52
ASE_00277	RNaseP_bact_a links to Rfam database...	0.46	0.47	0.44	43	48108	55	10	44	1	48
ASE_00279	RNaseP_bact_a links to Rfam database...	0.73	0.72	0.74	73	53202	33	3	23	7	28
ASE_00280	RNaseP_bact_a links to Rfam database...	0.67	0.66	0.68	65	51907	39	4	27	8	33
ASE_00281	RNaseP_bact_a links to Rfam database...	0.44	0.44	0.44	39	44462	51	5	45	1	49
ASE_00282	RNaseP_bact_a links to Rfam database...	0.44	0.44	0.45	56	77690	70	4	65	1	71
ASE_00283	RNaseP_bact_a links to Rfam database...	0.81	0.79	0.84	84	61676	25	2	14	9	23
ASE_00284	RNaseP_bact_a links to Rfam database...	0.51	0.50	0.51	54	58206	58	6	45	7	54
ASE_00285	RNaseP_bact_a links to Rfam database...	0.69	0.66	0.73	80	68896	38	2	28	8	42
ASE_00286	RNaseP_bact_a links to Rfam database...	0.49	0.49	0.50	45	46575	50	2	43	5	47
ASE_00287	RNaseP_bact_a links to Rfam database...	0.72	0.69	0.76	71	54852	32	2	21	9	32
ASE_00288	RNaseP_bact_a links to Rfam database...	0.44	0.43	0.45	40	45968	49	5	43	1	53
ASE_00289	RNaseP_bact_a links to Rfam database...	0.65	0.61	0.69	96	100886	48	4	39	5	61
ASE_00291	-	0.37	0.36	0.39	34	48429	54	9	44	1	60
ASE_00292	RNaseP_bact_a links to Rfam database...	0.63	0.60	0.66	83	81685	47	1	41	5	55
ASE_00294	RNaseP_bact_a links to Rfam database...	0.64	0.61	0.68	104	114329	52	0	48	4	67
ASE_00295	RNaseP_bact_a links to Rfam database...	0.47	0.45	0.49	59	73800	64	5	56	3	72
ASE_00296	RNaseP_bact_a links to Rfam database...	0.29	0.29	0.30	42	91664	100	6	94	0	103
ASE_00297	RNaseP_bact_a links to Rfam database...	0.66	0.66	0.65	65	52875	38	7	28	3	33
ASE_00298	RNaseP_bact_a links to Rfam database...	0.47	0.45	0.48	51	67422	60	9	46	5	62
ASE_00299	RNaseP_bact_a links to Rfam database...	0.59	0.59	0.58	59	49354	47	8	34	5	41
ASE_00303	RNaseP_nuc links to Rfam database...	0.61	0.65	0.57	62	67787	57	14	33	10	33
ASE_00305	RNaseP_bact_b links to Rfam database...	0.57	0.61	0.53	52	54516	55	17	30	8	33
ASE_00313	RNaseP_nuc links to Rfam database...	0.72	0.72	0.72	64	62392	45	6	19	20	25
ASE_00316	RNaseP_nuc links to Rfam database...	0.53	0.57	0.50	56	107768	91	23	33	35	42
ASE_00318	RNaseP_bact_b links to Rfam database...	0.62	0.62	0.61	73	80081	50	14	32	4	45
ASE_00321	RNaseP_bact_b links to Rfam database...	0.35	0.36	0.34	32	54520	67	9	54	4	56
ASE_00322	-	0.77	0.81	0.72	39	29349	39	3	12	24	9
ASE_00327	RNaseP_nuc links to Rfam database...	0.81	0.80	0.83	71	57205	35	1	14	20	18
ASE_00328	RNaseP_bact_b links to Rfam database...	0.41	0.41	0.41	46	72659	75	5	61	9	66
ASE_00329	RNaseP_nuc links to Rfam database...	0.66	0.70	0.62	44	40684	48	8	19	21	19
ASE_00330	RNaseP_nuc links to Rfam database...	0.70	0.71	0.70	64	56188	50	4	24	22	26
ASE_00332	RNaseP_bact_a links to Rfam database...	0.53	0.51	0.54	71	81678	63	2	59	2	67
ASE_00335	RNaseP_bact_b links to Rfam database...	0.42	0.42	0.42	49	75348	79	12	57	10	67
ASE_00337	RNaseP_nuc links to Rfam database...	0.46	0.49	0.43	35	39259	57	11	35	11	36
ASE_00338	RNaseP_nuc links to Rfam database...	0.48	0.47	0.50	46	66338	63	4	42	17	52
ASE_00339	RNaseP_bact_a links to Rfam database...	0.52	0.52	0.52	62	80081	69	6	51	12	57
ASE_00340	RNaseP_bact_a links to Rfam database...	0.76	0.75	0.76	64	45972	29	6	14	9	21
ASE_00342	RNaseP_bact_a links to Rfam database...	0.54	0.51	0.57	59	62377	48	2	43	3	56
ASE_00343	RNaseP_bact_a links to Rfam database...	0.55	0.57	0.53	64	83315	69	10	47	12	49
ASE_00344	-	0.76	0.77	0.75	43	27204	35	4	10	21	13
ASE_00346	RNaseP_arch links to Rfam database...	0.42	0.41	0.42	40	48110	59	4	51	4	57
ASE_00350	-	0.94	0.90	0.98	47	29598	27	0	1	26	5
ASE_00353	RNaseP_bact_a links to Rfam database...	0.50	0.51	0.49	55	57857	59	11	47	1	52
ASE_00359	RNaseP_arch links to Rfam database...	0.45	0.46	0.44	37	42693	55	3	45	7	43
ASE_00360	RNaseP_arch links to Rfam database...	0.31	0.32	0.31	21	29335	53	11	36	6	44
ASE_00361	RNaseP_bact_a links to Rfam database...	0.33	0.32	0.34	41	75346	82	10	69	3	86
ASE_00362	RNaseP_bact_a links to Rfam database...	0.57	0.57	0.57	52	48114	46	4	35	7	39
ASE_00363	RNaseP_bact_a links to Rfam database...	0.42	0.41	0.42	39	51267	60	2	52	6	55
ASE_00364	RNaseP_bact_a links to Rfam database...	0.54	0.54	0.55	57	54181	51	6	41	4	48
ASE_00366	RNaseP_bact_a links to Rfam database...	0.51	0.54	0.47	53	58541	60	10	49	1	45
ASE_00367	RNaseP_bact_a links to Rfam database...	0.31	0.31	0.30	27	42981	68	7	56	5	59
ASE_00369	RNaseP_bact_a links to Rfam database...	0.57	0.58	0.56	62	55835	48	3	45	0	45
ASE_00370	RNaseP_bact_a links to Rfam database...	0.62	0.63	0.61	53	41818	34	1	33	0	31
ASE_00372	RNaseP_bact_a links to Rfam database...	0.69	0.69	0.70	69	51904	34	5	25	4	31
ASE_00374	RNaseP_bact_a links to Rfam database...	0.65	0.66	0.64	58	44759	33	7	26	0	30
ASE_00375	RNaseP_bact_a links to Rfam database...	0.47	0.46	0.48	51	60271	59	4	52	3	59
ASE_00376	RNaseP_bact_a links to Rfam database...	0.52	0.51	0.52	54	56850	52	4	45	3	51
ASE_00377	RNaseP_bact_a links to Rfam database...	0.81	0.80	0.81	86	57524	26	3	17	6	21
ASE_00379	RNaseP_bact_a links to Rfam database...	0.61	0.61	0.61	54	45968	42	4	30	8	35
ASE_00380	RNaseP_bact_a links to Rfam database...	0.48	0.46	0.49	46	54852	54	2	46	6	53
ASE_00382	RNaseP_bact_a links to Rfam database...	0.40	0.40	0.40	34	41821	53	6	44	3	50
ASE_00383	RNaseP_bact_a links to Rfam database...	0.59	0.57	0.61	60	54517	43	3	35	5	45
ASE_00384	RNaseP_bact_a links to Rfam database...	0.68	0.70	0.67	64	48420	37	5	27	5	28
ASE_00385	RNaseP_bact_a links to Rfam database...	0.42	0.43	0.40	35	41818	53	6	46	1	46
ASE_00386	RNaseP_bact_a links to Rfam database...	0.54	0.56	0.52	54	50300	54	4	45	5	42
ASE_00387	RNaseP_bact_a links to Rfam database...	0.62	0.62	0.63	64	55844	43	1	36	6	40
ASE_00388	RNaseP_bact_a links to Rfam database...	0.61	0.63	0.60	56	45659	40	2	36	2	33
ASE_00390	RNaseP_bact_a links to Rfam database...	0.47	0.46	0.49	39	42116	50	6	34	10	46
ASE_00393	RNaseP_bact_a links to Rfam database...	0.53	0.53	0.54	49	47804	48	1	41	6	44
ASE_00394	RNaseP_bact_a links to Rfam database...	0.70	0.71	0.69	66	46875	32	3	27	2	27
ASE_00395	RNaseP_bact_a links to Rfam database...	0.55	0.55	0.56	46	41534	43	2	34	7	38
ASE_00396	RNaseP_bact_a links to Rfam database...	0.35	0.36	0.34	30	41529	62	11	46	5	53
ASE_00397	RNaseP_bact_a links to Rfam database...	0.50	0.50	0.50	53	54510	52	7	45	0	52
ASE_00398	RNaseP_bact_a links to Rfam database...	0.63	0.63	0.64	65	55844	40	2	34	4	39
ASE_00400	RNaseP_bact_a links to Rfam database...	0.56	0.56	0.56	59	57865	47	10	36	1	47
ASE_00401	RNaseP_bact_a links to Rfam database...	0.53	0.56	0.51	70	76892	66	13	53	0	56
ASE_00402	RNaseP_bact_a links to Rfam database...	0.43	0.42	0.43	36	42403	52	5	42	5	49
ASE_00403	RNaseP_bact_a links to Rfam database...	0.39	0.39	0.40	42	55839	64	3	61	0	65
ASE_00404	RNaseP_bact_a links to Rfam database...	0.35	0.35	0.36	30	42987	62	1	53	8	55
ASE_00406	RNaseP_bact_a links to Rfam database...	0.71	0.70	0.73	66	48737	27	8	17	2	28
ASE_00408	-	0.48	0.48	0.49	34	32315	41	2	34	5	37
ASE_00409	-	0.47	0.48	0.46	40	40954	47	7	40	0	43
ASE_00411	RNaseP_bact_a links to Rfam database...	0.30	0.30	0.31	27	49367	66	6	55	5	62
ASE_00412	RNaseP_bact_a links to Rfam database...	0.46	0.45	0.47	47	58210	57	9	45	3	58
ASE_00413	RNaseP_bact_a links to Rfam database...	0.56	0.59	0.54	48	44462	44	11	30	3	33
ASE_00414	RNaseP_bact_a links to Rfam database...	0.30	0.28	0.31	27	46273	67	4	56	7	68
ASE_00415	RNaseP_bact_a links to Rfam database...	0.48	0.50	0.47	51	54837	64	4	54	6	52
ASE_00416	RNaseP_bact_a links to Rfam database...	0.55	0.54	0.58	68	77303	56	9	41	6	59
ASE_00417	RNaseP_arch links to Rfam database...	0.44	0.45	0.43	45	54510	64	9	51	4	55
ASE_00418	RNaseP_arch links to Rfam database...	0.33	0.33	0.32	25	38704	54	5	47	2	50
ASE_00419	RNaseP_bact_a links to Rfam database...	0.73	0.73	0.74	75	54844	31	5	22	4	28
ASE_00420	RNaseP_nuc links to Rfam database...	0.65	0.68	0.61	43	43295	56	2	25	29	20
ASE_00422	RNaseP_bact_a links to Rfam database...	0.49	0.49	0.48	46	46876	55	5	44	6	48
ASE_00423	RNaseP_bact_a links to Rfam database...	0.59	0.58	0.60	63	56848	45	7	35	3	46
ASE_00426	RNaseP_bact_a links to Rfam database...	0.44	0.44	0.44	48	60967	61	6	54	1	60
ASE_00427	RNaseP_nuc links to Rfam database...	0.14	0.20	0.10	9	40668	82	27	51	4	37
ASE_00428	RNaseP_bact_a links to Rfam database...	0.68	0.66	0.70	82	76519	42	3	32	7	43
ASE_00429	-	0.39	0.38	0.40	25	28141	45	3	34	8	41
ASE_00430	RNaseP_bact_a links to Rfam database...	0.62	0.62	0.62	60	46874	42	7	30	5	37
ASE_00431	RNaseP_bact_a links to Rfam database...	0.56	0.55	0.57	52	46269	44	9	30	5	43
ASE_00434	RNaseP_bact_b links to Rfam database...	0.56	0.56	0.56	62	68154	57	10	39	8	48
ASE_00437	RNaseP_bact_a links to Rfam database...	0.44	0.42	0.46	57	79278	66	4	62	0	78
ASE_00438	RNaseP_bact_a links to Rfam database...	0.40	0.38	0.42	44	65960	62	6	56	0	72
ASE_00441	RNaseP_bact_a links to Rfam database...	0.77	0.74	0.81	83	64158	33	4	16	13	29
ASE_00443	RNaseP_nuc links to Rfam database...	0.93	0.88	0.98	44	26751	30	0	1	29	6
ASE_00447	RNaseP_bact_a links to Rfam database...	0.61	0.59	0.64	68	60272	43	2	36	5	48
ASE_00448	RNaseP_bact_a links to Rfam database...	0.51	0.50	0.52	56	64154	61	7	44	10	56
ASE_00451	RNaseP_bact_a links to Rfam database...	0.62	0.59	0.64	74	70761	44	1	40	3	51
ASE_00452	-	0.86	0.85	0.87	33	20872	29	0	5	24	6
ASE_00453	-	0.58	0.62	0.55	32	34133	60	3	23	34	20
ASE_00454	RNaseP_nuc links to Rfam database...	0.62	0.62	0.63	39	43303	51	1	22	28	24
CRW_00010	-	0.80	0.82	0.78	103	102699	49	6	23	20	23
CRW_00011	-	0.58	0.61	0.55	84	118188	84	11	58	15	54
CRW_00013	Intron_gpI links to Rfam database...	0.21	0.22	0.21	25	103620	117	13	82	22	90
CRW_00014	-	0.37	0.38	0.36	47	103611	93	13	69	11	76
CRW_00016	Intron_gpI links to Rfam database...	0.60	0.58	0.63	70	77309	55	5	37	13	50
CRW_00017	-	0.61	0.66	0.57	60	92129	72	11	35	26	31
CRW_00608	-	0.67	0.67	0.68	53	35700	32	6	19	7	26
CRW_00610	Intron_gpI links to Rfam database...	0.49	0.51	0.48	41	36230	44	9	35	0	40
CRW_00611	-	0.84	0.81	0.86	61	31304	13	4	6	3	14
CRW_00613	Intron_gpI links to Rfam database...	0.66	0.62	0.71	48	34912	28	1	19	8	30
CRW_00614	Intron_gpI links to Rfam database...	0.16	0.19	0.13	11	121684	137	27	49	61	46
CRW_00618	Intron_gpI links to Rfam database...	0.07	0.08	0.07	5	56205	92	15	55	22	56
CRW_00626	-	0.54	0.61	0.48	63	100895	78	26	41	11	41
CRW_00629	-	0.45	0.45	0.44	55	91254	72	14	55	3	67
CRW_00632	-	0.55	0.55	0.55	71	82900	63	4	53	6	57
CRW_00633	Intron_gpI links to Rfam database...	0.40	0.42	0.39	44	63434	70	10	58	2	62
CRW_00634	Intron_gpI links to Rfam database...	0.50	0.53	0.48	50	64516	59	11	43	5	44
CRW_00635	-	0.50	0.50	0.51	68	109145	75	11	54	10	69
CRW_00636	-	0.52	0.52	0.51	74	114816	75	11	59	5	69
CRW_00641	-	0.71	0.72	0.70	55	39824	35	6	18	11	21
CRW_00642	-	0.61	0.65	0.58	42	47205	54	8	23	23	23
CRW_00643	-	0.22	0.25	0.19	30	123102	131	27	97	7	92
CRW_00645	-	0.77	0.82	0.72	55	35435	31	8	13	10	12
CRW_00646	-	0.84	0.84	0.83	54	34915	29	0	11	18	10
CRW_00650	-	0.47	0.48	0.46	68	112902	88	5	75	8	74
CRW_00651	-	0.61	0.64	0.57	78	99991	68	18	41	9	43
CRW_00653	-	0.70	0.72	0.68	97	94687	49	12	34	3	37
CRW_00654	-	0.70	0.69	0.72	85	78092	38	4	29	5	39
CRW_00655	-	0.80	0.79	0.82	98	89133	29	4	18	7	26
CRW_00656	-	0.44	0.43	0.45	56	90401	74	10	58	6	73
CRW_00657	-	0.77	0.78	0.76	106	105891	37	3	30	4	30
CRW_00658	-	0.46	0.48	0.45	49	74581	61	24	37	0	53
CRW_00659	-	0.38	0.44	0.33	27	32304	61	15	39	7	34
CRW_00660	-	0.52	0.53	0.52	32	22093	33	7	23	3	28
CRW_00661	-	0.19	0.22	0.17	11	24245	57	11	43	3	40
CRW_00662	-	0.16	0.17	0.16	11	28610	64	5	54	5	54
CRW_00663	-	0.07	0.08	0.07	5	26035	74	9	57	8	56
CRW_00664	-	0.21	0.24	0.19	19	53529	80	18	62	0	59
CRW_00665	-	0.00	0.00	0.00	0	23597	60	10	46	4	48
CRW_00666	-	0.51	0.52	0.50	65	96011	81	4	61	16	61
CRW_00669	-	0.50	0.52	0.49	62	97334	77	14	51	12	57
CRW_00670	Intron_gpI links to Rfam database...	0.62	0.61	0.63	73	70009	45	9	34	2	47
CRW_00671	Intron_gpI links to Rfam database...	0.65	0.63	0.67	74	62725	43	1	35	7	43
CRW_00672	Intron_gpI links to Rfam database...	0.74	0.75	0.74	83	72278	38	6	23	9	28
CRW_00673	-	0.73	0.78	0.68	82	100008	54	22	16	16	23
CRW_00674	Intron_gpI links to Rfam database...	0.60	0.61	0.59	76	83308	55	10	42	3	48
CRW_00676	Intron_gpI links to Rfam database...	0.56	0.58	0.54	67	93403	71	15	43	13	48
CRW_00677	-	0.58	0.61	0.56	64	71895	59	13	38	8	41
CRW_00679	-	0.24	0.25	0.23	27	76517	99	17	75	7	80
CRW_00681	-	0.52	0.56	0.47	63	112917	89	18	52	19	49
CRW_00686	-	0.47	0.48	0.46	60	95136	80	9	61	10	65
CRW_00687	-	0.69	0.74	0.64	49	28603	32	8	20	4	17
CRW_00688	-	0.75	0.77	0.73	44	21885	17	7	9	1	13
CRW_00689	-	0.67	0.71	0.63	55	33583	34	11	21	2	22
CRW_00690	-	0.72	0.72	0.72	50	33342	27	5	14	8	19
CRW_00691	-	0.53	0.57	0.50	38	27185	40	5	33	2	29
CRW_00692	Intron_gpI links to Rfam database...	0.34	0.37	0.32	33	68532	80	22	48	10	57
CRW_00693	-	0.56	0.59	0.54	72	89119	72	11	51	10	50
CRW_00694	-	0.65	0.66	0.64	81	85779	51	14	31	6	41
CRW_00699	-	0.62	0.62	0.63	78	91682	49	9	37	3	48
CRW_00703	-	0.51	0.56	0.47	37	40392	48	15	26	7	29
CRW_00715	-	0.75	0.73	0.78	76	69280	25	4	18	3	28
CRW_00721	-	0.52	0.60	0.45	41	58562	65	22	28	15	27
PDB_00078	-	0.64	0.61	0.67	70	49666	34	7	27	0	45
PDB_00079	-	0.69	0.65	0.73	93	121644	66	8	26	32	49
PDB_00278	-	0.41	0.40	0.41	29	24906	41	5	36	0	43
PDB_00398	-	0.00	0.00	0.00	0	71875	135	34	101	0	103
PDB_00403	-	0.62	0.63	0.61	96	124592	77	15	47	15	57
PDB_00423	-	0.19	0.19	0.19	14	26723	59	7	52	0	60
PDB_00528	-	0.24	0.25	0.24	26	45946	84	6	78	0	77
PDB_00555	-	0.42	0.40	0.45	35	25347	46	0	43	3	53
PDB_00601	-	0.52	0.52	0.53	41	36237	37	8	29	0	38
PDB_00701	-	0.47	0.47	0.48	51	45344	57	5	51	1	58
PDB_00739	-	0.00	0.00	0.00	0	25799	79	12	67	0	67
PDB_00747	-	0.65	0.60	0.72	48	24464	19	0	19	0	32
PDB_00827	Intron_gpI links to Rfam database...	0.59	0.53	0.65	43	26962	24	3	20	1	38
PDB_00917	-	0.56	0.54	0.58	51	35157	43	3	34	6	44
PDB_00919	RNaseP_bact_a links to Rfam database...	0.52	0.49	0.55	50	44162	45	2	39	4	53
PDB_00985	-	0.23	0.27	0.20	17	30543	75	10	58	7	47
PDB_01076	-	0.80	0.71	0.90	56	23374	14	0	6	8	23
PDB_01129	-	0.27	0.28	0.26	20	35434	62	16	41	5	51
PDB_01144	-	0.23	0.22	0.24	28	82911	98	11	78	9	99
PDB_01157	-	0.23	0.22	0.23	22	49992	72	12	60	0	76
PDB_01161	-	0.15	0.16	0.14	12	36769	76	11	64	1	63
PDB_01193	-	0.42	0.41	0.42	62	105884	93	13	71	9	89
RFA_00597	Telomerase-vert links to Rfam database...	0.55	0.57	0.53	62	97786	78	17	38	23	47
RFA_00598	Telomerase-vert links to Rfam database...	0.27	0.28	0.26	28	84559	99	13	66	20	73
RFA_00599	Telomerase-vert links to Rfam database...	0.66	0.70	0.63	78	101351	67	17	29	21	33
RFA_00600	Telomerase-vert links to Rfam database...	0.52	0.58	0.46	58	120169	111	26	42	43	42
RFA_00601	Telomerase-vert links to Rfam database...	0.22	0.25	0.20	28	99098	124	19	90	15	86
RFA_00602	Telomerase-vert links to Rfam database...	0.49	0.52	0.47	60	101347	91	15	53	23	56
RFA_00606	Telomerase-cil links to Rfam database...	0.63	0.67	0.60	26	21278	33	8	9	16	13
RFA_00616	-	0.51	0.51	0.51	20	22966	33	6	13	14	19
RFA_00618	-	0.45	0.44	0.46	17	22968	34	6	14	14	22
RFA_00619	-	0.29	0.33	0.25	13	22740	49	14	24	11	26
RFA_00620	Telomerase-cil links to Rfam database...	0.46	0.46	0.46	18	21906	36	7	14	15	21
RFA_00621	RNase_MRP links to Rfam database...	0.47	0.46	0.48	35	46287	59	1	37	21	41
RFA_00623	RNase_MRP links to Rfam database...	0.41	0.40	0.42	31	43882	57	8	35	14	47
RFA_00624	RNase_MRP links to Rfam database...	0.29	0.31	0.27	19	30065	55	9	42	4	42
RFA_00626	rne5 links to Rfam database...	0.68	0.66	0.70	57	56535	42	6	18	18	30
RFA_00627	rne5 links to Rfam database...	0.72	0.68	0.77	59	56876	33	4	14	15	28
RFA_00628	rne5 links to Rfam database...	0.89	0.86	0.91	74	57210	32	2	5	25	12
RFA_00630	rne5 links to Rfam database...	0.58	0.60	0.57	52	56861	51	12	28	11	35
RFA_00639	7SK links to Rfam database...	0.22	0.24	0.20	21	54512	86	20	62	4	66
RFA_00814	R2_retro_el links to Rfam database...	0.39	0.39	0.39	16	25159	40	5	20	15	25
RFA_00815	R2_retro_el links to Rfam database...	0.65	0.71	0.59	29	24482	35	5	15	15	12
RFA_00816	R2_retro_el links to Rfam database...	0.74	0.78	0.70	32	23174	24	8	6	10	9
RFA_00817	R2_retro_el links to Rfam database...	0.35	0.41	0.30	17	21889	43	11	28	4	24
RFA_00818	R2_retro_el links to Rfam database...	0.47	0.54	0.41	22	20247	39	13	19	7	19
RFA_00819	R2_retro_el links to Rfam database...	0.96	0.95	0.98	39	27926	31	0	1	30	2
SRP_00002	Metazoa_SRP links to Rfam database...	0.85	0.83	0.86	85	45051	16	4	10	2	17
SRP_00003	-	0.83	0.86	0.79	83	45951	24	12	10	2	13
SRP_00006	Metazoa_SRP links to Rfam database...	0.93	0.91	0.96	92	45657	13	0	4	9	9
SRP_00009	Plant_SRP links to Rfam database...	0.44	0.43	0.45	44	46568	56	9	44	3	58
SRP_00011	Plant_SRP links to Rfam database...	0.50	0.49	0.52	51	46262	47	3	44	0	53
SRP_00012	Plant_SRP links to Rfam database...	0.70	0.68	0.73	69	46265	29	3	23	3	32
SRP_00015	Plant_SRP links to Rfam database...	0.77	0.74	0.80	73	46269	23	0	18	5	26
SRP_00016	Archaea_SRP links to Rfam database...	0.86	0.84	0.88	92	47790	15	2	11	2	17
SRP_00018	Fungi_SRP links to Rfam database...	0.72	0.70	0.74	57	38426	32	1	19	12	24
SRP_00019	Fungi_SRP links to Rfam database...	0.55	0.54	0.57	49	35960	39	5	32	2	42
SRP_00023	-	0.00	0.00	0.00	0	20858	52	13	39	0	35
SRP_00024	Bacteria_large_SRP links to Rfam database...	0.67	0.68	0.66	59	37585	32	5	26	1	28
SRP_00026	Bacteria_large_SRP links to Rfam database...	0.62	0.61	0.63	54	36770	40	2	30	8	34
SRP_00027	Bacteria_large_SRP links to Rfam database...	0.64	0.62	0.66	54	37046	29	3	25	1	33
SRP_00030	Bacteria_large_SRP links to Rfam database...	0.77	0.78	0.76	69	36765	24	4	18	2	19
SRP_00031	Bacteria_large_SRP links to Rfam database...	0.66	0.66	0.66	59	36225	36	2	29	5	30
SRP_00037	Bacteria_large_SRP links to Rfam database...	0.12	0.13	0.13	11	36497	77	6	71	0	76
SRP_00050	Metazoa_SRP links to Rfam database...	0.97	0.95	0.99	94	44755	4	0	1	3	5
SRP_00053	Metazoa_SRP links to Rfam database...	0.83	0.82	0.85	77	45059	24	0	14	10	17
SRP_00060	Metazoa_SRP links to Rfam database...	0.80	0.80	0.79	80	44450	25	5	16	4	20
SRP_00061	Metazoa_SRP links to Rfam database...	0.95	0.95	0.96	95	44751	11	0	4	7	5
SRP_00066	Metazoa_SRP links to Rfam database...	0.00	0.00	0.00	0	45355	96	10	86	0	100
SRP_00069	Fungi_SRP links to Rfam database...	0.73	0.73	0.74	62	34369	24	4	18	2	23
SRP_00073	Fungi_SRP links to Rfam database...	0.66	0.70	0.62	50	38979	45	6	25	14	21
SRP_00076	-	0.00	0.00	0.00	0	25359	78	14	52	12	39
SRP_00079	Plant_SRP links to Rfam database...	0.71	0.73	0.70	64	41813	35	4	24	7	24
SRP_00085	Plant_SRP links to Rfam database...	0.68	0.66	0.70	67	45355	32	5	24	3	34
SRP_00086	Metazoa_SRP links to Rfam database...	0.95	0.94	0.96	94	44155	8	0	4	4	6
SRP_00087	Fungi_SRP links to Rfam database...	0.17	0.21	0.14	12	37317	77	23	49	5	46
SRP_00088	Bacteria_large_SRP links to Rfam database...	0.66	0.67	0.64	60	34097	34	5	29	0	29
SRP_00089	Bacteria_large_SRP links to Rfam database...	0.86	0.86	0.88	77	35690	11	1	10	0	13
SRP_00090	Bacteria_large_SRP links to Rfam database...	0.63	0.63	0.62	57	35419	37	5	30	2	33
SRP_00091	Fungi_SRP links to Rfam database...	0.82	0.83	0.81	79	52877	25	4	15	6	16
SRP_00099	Plant_SRP links to Rfam database...	0.61	0.63	0.60	60	44750	42	7	33	2	35
SRP_00102	Metazoa_SRP links to Rfam database...	0.87	0.86	0.88	87	44452	14	1	11	2	14
SRP_00103	Metazoa_SRP links to Rfam database...	0.86	0.85	0.86	87	45350	14	0	14	0	15
SRP_00104	Fungi_SRP links to Rfam database...	0.47	0.52	0.42	36	34368	56	8	41	7	33
SRP_00108	-	0.61	0.67	0.56	47	38419	43	11	26	6	23
SRP_00117	Metazoa_SRP links to Rfam database...	0.39	0.38	0.40	39	45353	61	2	57	2	63
SRP_00118	-	0.64	0.64	0.64	61	39245	34	0	34	0	34
SRP_00120	-	0.92	0.90	0.94	77	37319	8	1	4	3	9
SRP_00123	Metazoa_SRP links to Rfam database...	0.87	0.85	0.89	77	36498	14	3	7	4	14
SRP_00124	Metazoa_SRP links to Rfam database...	0.67	0.67	0.68	57	37044	30	4	23	3	28
SRP_00125	-	0.67	0.64	0.70	69	50305	32	1	28	3	38
SRP_00127	Fungi_SRP links to Rfam database...	0.74	0.74	0.73	88	72270	37	8	24	5	31
SRP_00130	Archaea_SRP links to Rfam database...	0.39	0.40	0.38	39	49667	64	9	55	0	58
SRP_00136	Fungi_SRP links to Rfam database...	0.41	0.46	0.37	33	44163	64	14	43	7	38
SRP_00142	Archaea_SRP links to Rfam database...	0.40	0.42	0.39	39	45955	64	6	56	2	54
SRP_00143	Archaea_SRP links to Rfam database...	0.86	0.85	0.86	86	49670	20	1	13	6	15
SRP_00144	Archaea_SRP links to Rfam database...	0.73	0.74	0.72	70	46568	34	1	26	7	24
SRP_00148	Fungi_SRP links to Rfam database...	0.42	0.44	0.40	38	49991	68	7	50	11	49
SRP_00152	Plant_SRP links to Rfam database...	0.55	0.55	0.55	57	45650	49	5	41	3	46
SRP_00153	Plant_SRP links to Rfam database...	0.75	0.73	0.78	78	46871	24	6	16	2	29
SRP_00157	Fungi_SRP links to Rfam database...	0.38	0.42	0.35	30	44167	63	15	41	7	42
SRP_00158	Fungi_SRP links to Rfam database...	0.35	0.42	0.30	48	124091	126	45	67	14	67
SRP_00160	Fungi_SRP links to Rfam database...	0.40	0.40	0.40	52	86191	78	6	71	1	78
SRP_00167	-	0.68	0.69	0.67	58	38695	34	4	24	6	26
SRP_00168	-	0.50	0.49	0.50	45	38691	45	2	43	0	46
SRP_00171	Metazoa_SRP links to Rfam database...	0.00	0.00	0.00	0	45348	103	15	88	0	88
SRP_00172	-	0.74	0.73	0.75	66	38972	28	0	22	6	25
SRP_00173	Bacteria_large_SRP links to Rfam database...	0.73	0.72	0.75	65	38139	28	1	21	6	25
SRP_00174	Bacteria_large_SRP links to Rfam database...	0.69	0.71	0.68	61	38691	33	8	21	4	25
SRP_00175	Fungi_SRP links to Rfam database...	0.50	0.51	0.49	43	44463	51	10	35	6	41
SRP_00178	Plant_SRP links to Rfam database...	0.85	0.80	0.90	82	45662	12	1	8	3	20
SRP_00179	Plant_SRP links to Rfam database...	0.70	0.68	0.72	71	45958	31	5	22	4	34
SRP_00180	-	0.59	0.61	0.58	33	22521	40	1	23	16	21
SRP_00181	Plant_SRP links to Rfam database...	0.20	0.20	0.20	20	45956	80	1	79	0	82
SRP_00182	Plant_SRP links to Rfam database...	0.70	0.68	0.71	69	45959	31	2	26	3	32
SRP_00184	Plant_SRP links to Rfam database...	0.32	0.32	0.32	32	45957	69	9	58	2	68
SRP_00188	Plant_SRP links to Rfam database...	0.19	0.19	0.19	15	31046	64	9	55	0	64
SRP_00197	Archaea_SRP links to Rfam database...	0.49	0.49	0.49	49	49355	54	3	48	3	52
SRP_00198	Archaea_SRP links to Rfam database...	0.63	0.62	0.65	64	50941	39	2	33	4	39
SRP_00199	Archaea_SRP links to Rfam database...	0.26	0.26	0.26	27	50938	77	4	71	2	78
SRP_00201	Archaea_SRP links to Rfam database...	0.90	0.87	0.92	97	47790	10	0	8	2	14
SRP_00202	Archaea_SRP links to Rfam database...	0.85	0.84	0.86	98	54171	20	0	16	4	19
SRP_00203	Archaea_SRP links to Rfam database...	0.80	0.82	0.79	86	48719	29	1	22	6	19
SRP_00204	Archaea_SRP links to Rfam database...	0.60	0.61	0.60	62	49037	43	7	35	1	40
SRP_00206	Archaea_SRP links to Rfam database...	0.84	0.84	0.84	91	47787	18	6	11	1	17
SRP_00208	Archaea_SRP links to Rfam database...	0.68	0.68	0.68	69	46564	34	7	25	2	32
SRP_00228	Metazoa_SRP links to Rfam database...	0.95	0.94	0.97	89	45359	12	0	3	9	6
SRP_00230	Fungi_SRP links to Rfam database...	0.74	0.76	0.72	68	39527	30	4	22	4	22
SRP_00234	Bacteria_large_SRP links to Rfam database...	0.34	0.36	0.33	31	36221	65	7	56	2	55
SRP_00239	Plant_SRP links to Rfam database...	0.21	0.22	0.20	20	50303	81	15	65	1	73
SRP_00240	Plant_SRP links to Rfam database...	0.81	0.80	0.81	82	48104	26	2	17	7	20
SRP_00241	Plant_SRP links to Rfam database...	0.55	0.59	0.52	48	45963	48	12	33	3	34
SRP_00246	-	0.42	0.46	0.39	34	40953	61	10	44	7	40
SRP_00247	Metazoa_SRP links to Rfam database...	0.41	0.45	0.37	39	47173	70	14	52	4	48
SRP_00252	Metazoa_SRP links to Rfam database...	0.53	0.56	0.50	50	49041	53	13	37	3	39
SRP_00253	Metazoa_SRP links to Rfam database...	0.64	0.67	0.61	60	49357	43	6	32	5	30
SRP_00254	Fungi_SRP links to Rfam database...	0.49	0.54	0.45	33	32311	47	12	29	6	28
SRP_00255	Archaea_SRP links to Rfam database...	0.62	0.64	0.61	60	47487	46	3	36	7	34
SRP_00257	Metazoa_SRP links to Rfam database...	0.80	0.81	0.79	87	50930	26	4	19	3	21
SRP_00260	Metazoa_SRP links to Rfam database...	0.64	0.69	0.60	69	47780	48	7	39	2	31
SRP_00261	-	0.78	0.78	0.79	81	45348	23	4	18	1	23
SRP_00262	-	0.65	0.67	0.63	68	48408	42	4	36	2	33
SRP_00263	-	0.73	0.75	0.72	78	48407	31	11	20	0	26
SRP_00265	Fungi_SRP links to Rfam database...	0.56	0.62	0.52	45	41241	53	9	33	11	28
SRP_00267	Metazoa_SRP links to Rfam database...	0.88	0.89	0.88	85	44454	19	0	12	7	11
SRP_00276	Archaea_SRP links to Rfam database...	0.86	0.85	0.86	94	50612	16	5	10	1	16
SRP_00278	Archaea_SRP links to Rfam database...	0.71	0.71	0.70	75	45949	34	2	30	2	30
SRP_00282	Metazoa_SRP links to Rfam database...	0.32	0.37	0.28	23	43284	67	19	39	9	40
SRP_00290	Fungi_SRP links to Rfam database...	0.67	0.68	0.66	92	100436	62	3	45	14	43
SRP_00299	Metazoa_SRP links to Rfam database...	0.63	0.63	0.63	62	44155	37	3	33	1	37
SRP_00300	Metazoa_SRP links to Rfam database...	0.97	0.97	0.98	91	44160	6	0	2	4	3
SRP_00301	Fungi_SRP links to Rfam database...	0.87	0.87	0.87	75	32554	16	1	10	5	11
SRP_00302	Fungi_SRP links to Rfam database...	0.25	0.27	0.23	22	41519	77	15	60	2	59
SRP_00308	Bacteria_large_SRP links to Rfam database...	0.06	0.07	0.06	6	36221	88	12	76	0	82
SRP_00317	Metazoa_SRP links to Rfam database...	0.93	0.89	0.98	87	45061	10	0	2	8	11
SRP_00321	Archaea_SRP links to Rfam database...	0.70	0.71	0.68	77	47473	38	7	29	2	31
SRP_00322	Archaea_SRP links to Rfam database...	0.62	0.62	0.62	68	48406	43	5	37	1	41
SRP_00323	Archaea_SRP links to Rfam database...	0.93	0.93	0.93	100	47171	11	0	7	4	7
SRP_00328	Metazoa_SRP links to Rfam database...	0.64	0.66	0.63	56	39532	38	8	25	5	29
SRP_00329	Metazoa_SRP links to Rfam database...	0.61	0.62	0.60	53	39814	37	10	26	1	32
SRP_00330	Archaea_SRP links to Rfam database...	0.38	0.41	0.36	39	49978	70	6	63	1	56
SRP_00331	Metazoa_SRP links to Rfam database...	0.55	0.55	0.55	48	37587	43	3	37	3	39
SRP_00332	Archaea_SRP links to Rfam database...	0.71	0.72	0.70	76	50295	38	3	29	6	30
SRP_00335	Bacteria_large_SRP links to Rfam database...	0.30	0.41	0.22	16	35173	77	26	30	21	23
SRP_00336	-	0.26	0.29	0.25	22	38971	68	8	59	1	55
SRP_00337	Bacteria_large_SRP links to Rfam database...	0.65	0.64	0.67	58	35424	31	1	28	2	33
SRP_00339	Archaea_SRP links to Rfam database...	0.54	0.55	0.52	52	44451	52	6	42	4	42
SRP_00340	Metazoa_SRP links to Rfam database...	0.55	0.59	0.52	48	41235	48	8	37	3	34
SRP_00345	-	0.28	0.31	0.26	16	20645	51	12	33	6	36
SRP_00347	Metazoa_SRP links to Rfam database...	0.85	0.84	0.86	81	46571	19	4	9	6	15
SRP_00348	-	0.53	0.52	0.55	51	46878	42	8	34	0	47
SRP_00353	-	0.89	0.85	0.92	85	37858	8	0	7	1	15
SRP_00354	-	0.81	0.81	0.82	75	38690	19	0	16	3	18
SRP_00355	-	0.69	0.70	0.69	67	41808	32	4	26	2	29
SRP_00361	Plant_SRP links to Rfam database...	0.77	0.77	0.77	69	41815	32	4	17	11	21
SRP_00368	Metazoa_SRP links to Rfam database...	0.95	0.94	0.97	92	43861	9	0	3	6	6
SRP_00371	Fungi_SRP links to Rfam database...	0.54	0.55	0.54	45	36231	41	3	36	2	37
TMR_00007	tmRNA links to Rfam database...	0.38	0.37	0.39	40	61674	67	9	53	5	68
TMR_00008	tmRNA links to Rfam database...	0.34	0.35	0.34	37	65958	80	11	60	9	69
TMR_00010	tmRNA links to Rfam database...	0.29	0.30	0.28	29	57866	75	14	61	0	67
TMR_00012	tmRNA links to Rfam database...	0.34	0.37	0.31	30	64523	84	25	42	17	51
TMR_00014	tmRNA links to Rfam database...	0.57	0.56	0.57	62	68526	57	17	30	10	48
TMR_00017	tmRNA links to Rfam database...	0.36	0.38	0.35	39	67049	79	17	56	6	63
TMR_00018	tmRNA links to Rfam database...	0.12	0.13	0.12	12	64521	93	11	76	6	80
TMR_00028	tmRNA links to Rfam database...	0.30	0.33	0.28	32	62722	84	14	67	3	65
TMR_00030	tmRNA links to Rfam database...	0.17	0.19	0.16	21	75726	111	17	91	3	90
TMR_00034	tmRNA links to Rfam database...	0.64	0.64	0.64	70	59921	47	10	30	7	40
TMR_00035	tmRNA links to Rfam database...	0.30	0.33	0.28	32	67782	89	12	70	7	66
TMR_00036	tmRNA links to Rfam database...	0.63	0.65	0.62	66	90418	59	15	26	18	35
TMR_00038	tmRNA links to Rfam database...	0.23	0.24	0.22	26	71136	95	11	80	4	84
TMR_00042	tmRNA links to Rfam database...	0.24	0.24	0.24	24	62735	79	9	67	3	74
TMR_00046	tmRNA links to Rfam database...	0.54	0.55	0.52	53	62734	54	12	36	6	43
TMR_00047	tmRNA links to Rfam database...	0.25	0.30	0.22	17	48437	79	18	44	17	40
TMR_00048	tmRNA links to Rfam database...	0.22	0.24	0.20	23	64866	96	16	75	5	72
TMR_00049	tmRNA links to Rfam database...	0.51	0.53	0.49	46	63097	59	9	38	12	41
TMR_00051	tmRNA links to Rfam database...	0.66	0.65	0.68	61	65613	45	7	22	16	33
TMR_00055	tmRNA links to Rfam database...	0.38	0.38	0.39	43	78894	78	8	58	12	71
TMR_00057	tmRNA links to Rfam database...	0.14	0.16	0.12	13	73807	110	27	73	10	66
TMR_00061	tmRNA links to Rfam database...	0.22	0.23	0.21	23	59574	95	11	77	7	76
TMR_00062	tmRNA links to Rfam database...	0.29	0.32	0.28	33	78486	96	19	68	9	71
TMR_00064	tmRNA links to Rfam database...	0.39	0.41	0.37	42	76913	82	21	52	9	61
TMR_00065	tmRNA links to Rfam database...	0.54	0.58	0.52	61	76518	59	16	41	2	45
TMR_00067	tmRNA links to Rfam database...	0.17	0.18	0.16	20	82091	106	14	90	2	94
TMR_00073	tmRNA links to Rfam database...	0.43	0.43	0.43	50	65588	65	5	60	0	67
TMR_00076	tmRNA links to Rfam database...	0.32	0.34	0.31	34	70766	82	15	61	6	66
TMR_00080	tmRNA links to Rfam database...	0.33	0.33	0.32	32	70401	67	19	48	0	64
TMR_00081	tmRNA links to Rfam database...	0.47	0.45	0.48	48	67061	53	12	40	1	58
TMR_00082	tmRNA links to Rfam database...	0.41	0.42	0.40	40	67795	65	19	42	4	56
TMR_00083	tmRNA links to Rfam database...	0.34	0.34	0.34	36	68160	78	14	55	9	69
TMR_00092	tmRNA links to Rfam database...	0.40	0.42	0.38	42	67417	72	17	52	3	59
TMR_00093	tmRNA links to Rfam database...	0.29	0.31	0.27	32	64141	88	16	72	0	70
TMR_00096	tmRNA links to Rfam database...	0.44	0.46	0.43	46	64872	67	18	44	5	54
TMR_00101	tmRNA links to Rfam database...	0.42	0.43	0.42	46	64152	67	7	56	4	61
TMR_00102	tmRNA links to Rfam database...	0.30	0.33	0.28	33	64142	88	20	66	2	68
TMR_00103	tmRNA links to Rfam database...	0.49	0.50	0.49	54	64150	58	12	45	1	54
TMR_00104	-	0.08	0.10	0.07	7	66700	94	34	54	6	63
TMR_00106	tmRNA links to Rfam database...	0.39	0.42	0.38	50	89967	87	19	64	4	70
TMR_00109	tmRNA links to Rfam database...	0.36	0.36	0.35	44	88286	83	26	54	3	78
TMR_00111	tmRNA links to Rfam database...	0.25	0.26	0.24	32	90393	103	18	82	3	90
TMR_00116	tmRNA links to Rfam database...	0.71	0.68	0.73	71	64883	41	3	23	15	33
TMR_00117	tmRNA links to Rfam database...	0.61	0.62	0.59	73	80077	59	8	42	9	45
TMR_00118	tmRNA links to Rfam database...	0.37	0.37	0.37	44	81286	83	3	73	7	76
TMR_00119	tmRNA links to Rfam database...	0.54	0.55	0.54	57	71904	57	9	40	8	47
TMR_00123	tmRNA links to Rfam database...	0.46	0.47	0.46	47	66327	57	11	45	1	54
TMR_00124	tmRNA links to Rfam database...	0.35	0.38	0.33	37	70388	89	13	62	14	61
TMR_00125	tmRNA links to Rfam database...	0.26	0.27	0.25	27	64152	86	17	65	4	72
TMR_00127	tmRNA links to Rfam database...	0.23	0.25	0.22	24	62728	86	24	59	3	73
TMR_00128	tmRNA links to Rfam database...	0.46	0.49	0.44	47	60968	62	21	39	2	49
TMR_00131	tmRNA links to Rfam database...	0.27	0.27	0.28	27	64882	78	13	58	7	72
TMR_00135	tmRNA links to Rfam database...	0.51	0.49	0.53	49	62742	53	10	34	9	50
TMR_00136	tmRNA links to Rfam database...	0.19	0.21	0.18	21	74572	102	25	73	4	80
TMR_00137	tmRNA links to Rfam database...	0.16	0.18	0.15	16	60971	92	19	69	4	73
TMR_00139	tmRNA links to Rfam database...	0.56	0.60	0.51	55	62021	61	19	33	9	36
TMR_00140	tmRNA links to Rfam database...	0.49	0.50	0.49	50	73817	69	8	45	16	50
TMR_00142	tmRNA links to Rfam database...	0.50	0.52	0.49	53	70767	66	16	40	10	49
TMR_00143	tmRNA links to Rfam database...	0.44	0.46	0.44	47	64512	70	10	51	9	56
TMR_00144	tmRNA links to Rfam database...	0.25	0.26	0.23	27	74189	92	16	73	3	76
TMR_00146	tmRNA links to Rfam database...	0.87	0.88	0.86	37	32088	34	2	4	28	5
TMR_00148	tmRNA links to Rfam database...	0.69	0.88	0.54	15	27702	49	9	4	36	2
TMR_00150	tmRNA links to Rfam database...	0.71	0.71	0.71	30	43029	53	2	10	41	12
TMR_00152	tmRNA links to Rfam database...	0.25	0.26	0.24	30	81283	104	12	81	11	85
TMR_00155	tmRNA links to Rfam database...	0.34	0.33	0.35	34	61680	70	4	58	8	70
TMR_00156	tmRNA links to Rfam database...	0.27	0.28	0.25	27	60272	84	14	65	5	70
TMR_00158	tmRNA links to Rfam database...	0.44	0.43	0.44	43	60628	60	9	46	5	56
TMR_00159	tmRNA links to Rfam database...	0.34	0.36	0.32	33	62025	81	18	52	11	59
TMR_00160	tmRNA links to Rfam database...	0.35	0.37	0.34	35	64517	76	14	54	8	60
TMR_00164	tmRNA links to Rfam database...	0.39	0.39	0.39	41	66690	72	10	54	8	65
TMR_00165	tmRNA links to Rfam database...	0.29	0.31	0.28	30	61667	90	12	67	11	67
TMR_00166	tmRNA links to Rfam database...	0.20	0.20	0.20	20	61676	86	11	69	6	81
TMR_00168	tmRNA links to Rfam database...	0.68	0.66	0.71	75	60970	35	3	27	5	39
TMR_00173	tmRNA links to Rfam database...	0.31	0.36	0.27	15	42139	68	18	23	27	27
TMR_00179	tmRNA links to Rfam database...	0.53	0.55	0.50	54	67054	64	11	42	11	44
TMR_00180	tmRNA links to Rfam database...	0.64	0.65	0.63	64	67060	50	9	28	13	35
TMR_00182	tmRNA links to Rfam database...	0.14	0.15	0.14	15	66323	96	12	80	4	87
TMR_00183	tmRNA links to Rfam database...	0.13	0.14	0.12	14	63077	105	8	91	6	89
TMR_00184	tmRNA links to Rfam database...	0.51	0.51	0.51	52	63088	58	5	45	8	50
TMR_00193	tmRNA links to Rfam database...	0.41	0.44	0.39	35	59250	61	16	39	6	45
TMR_00194	tmRNA links to Rfam database...	0.45	0.46	0.45	43	62739	56	17	36	3	50
TMR_00196	tmRNA links to Rfam database...	0.54	0.54	0.55	52	60980	53	6	37	10	45
TMR_00199	tmRNA links to Rfam database...	0.57	0.61	0.54	56	62732	54	13	34	7	36
TMR_00200	-	0.57	0.57	0.57	43	41540	44	3	30	11	32
TMR_00204	tmRNA links to Rfam database...	0.33	0.34	0.33	33	60277	78	14	54	10	64
TMR_00207	tmRNA links to Rfam database...	0.40	0.41	0.40	42	72286	69	9	53	7	61
TMR_00223	tmRNA links to Rfam database...	0.25	0.26	0.23	25	64154	86	24	58	4	70
TMR_00224	tmRNA links to Rfam database...	0.40	0.43	0.38	43	64868	70	9	60	1	58
TMR_00226	tmRNA links to Rfam database...	0.34	0.36	0.32	38	69631	83	16	66	1	67
TMR_00227	tmRNA links to Rfam database...	0.50	0.52	0.47	53	70013	62	9	50	3	48
TMR_00228	tmRNA links to Rfam database...	0.29	0.31	0.27	34	88283	101	26	67	8	74
TMR_00234	tmRNA links to Rfam database...	0.25	0.26	0.23	27	58880	93	15	74	4	75
TMR_00238	tmRNA links to Rfam database...	0.37	0.41	0.34	41	84547	89	16	62	11	60
TMR_00239	tmRNA links to Rfam database...	0.45	0.47	0.43	45	61671	61	11	49	1	51
TMR_00240	tmRNA links to Rfam database...	0.21	0.24	0.19	20	63082	91	23	65	3	65
TMR_00246	-	0.57	0.59	0.56	20	78174	114	3	13	98	14
TMR_00248	tmRNA links to Rfam database...	0.28	0.32	0.25	12	54237	88	13	23	52	26
TMR_00257	tmRNA links to Rfam database...	0.12	0.12	0.13	12	67066	89	7	76	6	86
TMR_00259	tmRNA links to Rfam database...	0.57	0.58	0.56	60	67789	50	16	31	3	43
TMR_00261	tmRNA links to Rfam database...	0.55	0.58	0.52	59	66682	58	20	34	4	42
TMR_00262	tmRNA links to Rfam database...	0.54	0.57	0.51	59	74189	57	20	37	0	45
TMR_00271	tmRNA links to Rfam database...	0.38	0.40	0.37	36	64163	71	13	49	9	55
TMR_00274	tmRNA links to Rfam database...	0.29	0.30	0.28	32	66682	87	13	68	6	73
TMR_00278	tmRNA links to Rfam database...	0.43	0.45	0.42	46	67786	74	7	57	10	56
TMR_00279	tmRNA links to Rfam database...	0.48	0.49	0.46	46	68907	63	12	41	10	48
TMR_00280	tmRNA links to Rfam database...	0.50	0.53	0.48	54	65953	72	9	50	13	47
TMR_00283	tmRNA links to Rfam database...	0.47	0.47	0.47	45	65245	59	6	45	8	51
TMR_00289	tmRNA links to Rfam database...	0.56	0.58	0.55	57	67057	59	9	38	12	41
TMR_00290	tmRNA links to Rfam database...	0.19	0.21	0.18	19	64158	92	15	69	8	73
TMR_00296	tmRNA links to Rfam database...	0.32	0.34	0.31	33	68900	82	11	62	9	65
TMR_00298	tmRNA links to Rfam database...	0.47	0.50	0.44	51	68149	69	16	49	4	50
TMR_00300	tmRNA links to Rfam database...	0.53	0.54	0.52	61	70382	67	12	45	10	51
TMR_00301	tmRNA links to Rfam database...	0.39	0.42	0.37	40	82106	74	21	48	5	56
TMR_00302	tmRNA links to Rfam database...	0.24	0.28	0.21	26	77295	104	32	68	4	68
TMR_00305	tmRNA links to Rfam database...	0.69	0.66	0.73	67	60983	34	5	20	9	35
TMR_00306	tmRNA links to Rfam database...	0.21	0.22	0.21	23	64152	86	14	72	0	83
TMR_00310	tmRNA links to Rfam database...	0.52	0.52	0.52	51	63805	55	6	41	8	47
TMR_00317	tmRNA links to Rfam database...	0.54	0.56	0.52	57	68156	55	14	38	3	45
TMR_00331	tmRNA links to Rfam database...	0.30	0.34	0.26	28	66687	90	17	63	10	54
TMR_00332	tmRNA links to Rfam database...	0.48	0.47	0.49	47	67065	53	12	37	4	52
TMR_00334	tmRNA links to Rfam database...	0.30	0.31	0.30	31	66691	76	10	63	3	70
TMR_00337	tmRNA links to Rfam database...	0.55	0.55	0.56	65	82912	56	12	39	5	54
TMR_00340	tmRNA links to Rfam database...	0.37	0.38	0.36	31	64175	79	5	50	24	50
TMR_00341	tmRNA links to Rfam database...	0.21	0.23	0.19	21	63080	97	24	65	8	71
TMR_00343	tmRNA links to Rfam database...	0.48	0.47	0.49	49	64881	59	4	46	9	56
TMR_00345	tmRNA links to Rfam database...	0.50	0.49	0.51	51	63803	55	14	35	6	53
TMR_00346	tmRNA links to Rfam database...	0.49	0.52	0.46	49	64155	59	15	42	2	45
TMR_00348	tmRNA links to Rfam database...	0.14	0.14	0.15	14	77325	100	18	64	18	85
TMR_00352	tmRNA links to Rfam database...	0.47	0.52	0.43	39	95175	94	20	32	42	36
TMR_00353	tmRNA links to Rfam database...	0.47	0.50	0.44	53	84135	76	22	45	9	52
TMR_00357	tmRNA links to Rfam database...	0.38	0.40	0.37	37	82927	79	21	43	15	55
TMR_00358	tmRNA links to Rfam database...	0.25	0.26	0.25	26	74973	96	19	60	17	73
TMR_00361	-	0.33	0.40	0.27	29	93420	100	30	49	21	43
TMR_00366	tmRNA links to Rfam database...	0.27	0.28	0.27	28	67791	90	16	61	13	72
TMR_00372	tmRNA links to Rfam database...	0.53	0.56	0.50	54	70392	67	13	41	13	42
TMR_00374	tmRNA links to Rfam database...	0.23	0.26	0.21	24	81693	99	23	70	6	68
TMR_00375	tmRNA links to Rfam database...	0.42	0.45	0.40	44	73427	73	15	50	8	54
TMR_00376	tmRNA links to Rfam database...	0.43	0.45	0.41	43	74587	79	13	48	18	52
TMR_00378	tmRNA links to Rfam database...	0.13	0.14	0.13	14	67784	109	18	80	11	83
TMR_00383	tmRNA links to Rfam database...	0.21	0.22	0.21	22	66688	94	11	74	9	78
TMR_00384	tmRNA links to Rfam database...	0.39	0.40	0.39	43	65592	74	12	56	6	65
TMR_00393	tmRNA links to Rfam database...	0.42	0.47	0.37	25	53233	69	15	28	26	28
TMR_00395	tmRNA links to Rfam database...	0.52	0.50	0.53	55	64517	52	8	40	4	54
TMR_00398	tmRNA links to Rfam database...	0.67	0.65	0.69	69	65241	37	1	30	6	37
TMR_00399	tmRNA links to Rfam database...	0.17	0.18	0.15	17	64869	98	27	67	4	77
TMR_00404	tmRNA links to Rfam database...	0.29	0.32	0.27	29	67420	90	24	55	11	63
TMR_00408	tmRNA links to Rfam database...	0.60	0.64	0.57	56	65968	51	15	27	9	32
TMR_00409	tmRNA links to Rfam database...	0.65	0.74	0.57	34	68575	75	10	16	49	12
TMR_00411	tmRNA links to Rfam database...	0.64	0.64	0.64	56	60987	41	9	23	9	31
TMR_00415	tmRNA links to Rfam database...	0.39	0.40	0.39	40	67059	67	10	52	5	61
TMR_00419	tmRNA links to Rfam database...	0.41	0.41	0.41	46	81698	85	13	53	19	65
TMR_00422	tmRNA links to Rfam database...	0.50	0.52	0.48	48	67795	62	12	41	9	44
TMR_00423	tmRNA links to Rfam database...	0.31	0.36	0.27	26	63808	88	22	47	19	47
TMR_00427	tmRNA links to Rfam database...	0.31	0.31	0.31	30	67431	74	9	58	7	67
TMR_00429	tmRNA links to Rfam database...	0.28	0.28	0.28	31	74581	88	14	65	9	78
TMR_00430	tmRNA links to Rfam database...	0.26	0.27	0.25	29	82504	92	14	74	4	80
TMR_00431	tmRNA links to Rfam database...	0.64	0.65	0.62	36	51945	72	6	16	50	19
TMR_00432	tmRNA links to Rfam database...	0.24	0.26	0.23	27	79681	100	12	80	8	77
TMR_00433	tmRNA links to Rfam database...	0.32	0.33	0.31	35	80087	83	10	68	5	71
TMR_00439	tmRNA links to Rfam database...	0.38	0.41	0.36	41	68520	84	21	53	10	60
TMR_00441	tmRNA links to Rfam database...	0.17	0.19	0.16	16	62028	92	27	57	8	67
TMR_00443	tmRNA links to Rfam database...	0.45	0.45	0.45	47	67056	60	15	43	2	57
TMR_00448	tmRNA links to Rfam database...	0.55	0.55	0.55	51	62036	48	6	35	7	41
TMR_00451	tmRNA links to Rfam database...	0.17	0.19	0.16	17	63441	88	16	72	0	72
TMR_00457	tmRNA links to Rfam database...	0.39	0.40	0.38	41	78497	75	10	58	7	61
TMR_00458	tmRNA links to Rfam database...	0.36	0.37	0.37	34	63453	68	11	48	9	59
TMR_00460	tmRNA links to Rfam database...	0.51	0.53	0.49	56	79286	65	13	46	6	50
TMR_00465	tmRNA links to Rfam database...	0.23	0.26	0.22	24	64151	88	24	62	2	70
TMR_00469	tmRNA links to Rfam database...	0.48	0.51	0.46	51	64508	66	21	40	5	49
TMR_00472	tmRNA links to Rfam database...	0.59	0.58	0.60	56	64526	52	7	31	14	41
TMR_00478	tmRNA links to Rfam database...	0.23	0.24	0.22	24	71899	90	19	68	3	75
TMR_00498	tmRNA links to Rfam database...	0.53	0.54	0.52	53	68905	59	11	37	11	46
TMR_00499	tmRNA links to Rfam database...	0.20	0.21	0.18	21	64505	102	10	84	8	78
TMR_00501	tmRNA links to Rfam database...	0.40	0.41	0.40	38	62385	63	9	49	5	54
TMR_00502	tmRNA links to Rfam database...	0.33	0.37	0.31	34	75355	86	18	59	9	59
TMR_00503	tmRNA links to Rfam database...	0.39	0.40	0.39	44	67783	73	9	60	4	67
TMR_00519	tmRNA links to Rfam database...	0.20	0.21	0.19	20	63083	97	18	69	10	75
TMR_00520	tmRNA links to Rfam database...	0.33	0.35	0.32	35	63080	85	13	62	10	64
TMR_00522	tmRNA links to Rfam database...	0.46	0.47	0.45	46	63088	65	12	44	9	51
TMR_00528	tmRNA links to Rfam database...	0.34	0.34	0.34	33	63093	75	13	51	11	64
TMR_00540	tmRNA links to Rfam database...	0.24	0.24	0.24	25	73433	82	12	66	4	79
TMR_00541	tmRNA links to Rfam database...	0.35	0.35	0.34	37	61668	77	12	59	6	68
TMR_00544	tmRNA links to Rfam database...	0.52	0.53	0.50	57	89563	63	20	36	7	51
TMR_00547	tmRNA links to Rfam database...	0.58	0.57	0.60	57	65246	43	2	36	5	43
TMR_00553	tmRNA links to Rfam database...	0.45	0.46	0.45	37	48123	50	15	30	5	44
TMR_00559	tmRNA links to Rfam database...	0.35	0.35	0.35	35	62382	68	12	52	4	66
TMR_00560	tmRNA links to Rfam database...	0.41	0.42	0.41	41	60975	68	6	53	9	57
TMR_00562	tmRNA links to Rfam database...	0.38	0.39	0.37	40	72663	76	13	55	8	62
TMR_00563	tmRNA links to Rfam database...	0.41	0.44	0.38	45	75349	80	18	54	8	58
TMR_00566	tmRNA links to Rfam database...	0.32	0.33	0.32	33	60622	76	13	58	5	67
TMR_00568	tmRNA links to Rfam database...	0.26	0.27	0.25	27	60617	88	12	70	6	72
TMR_00570	tmRNA links to Rfam database...	0.35	0.36	0.35	35	60277	74	5	61	8	62
TMR_00571	tmRNA links to Rfam database...	0.28	0.29	0.28	29	60621	84	12	64	8	70
TMR_00576	tmRNA links to Rfam database...	0.54	0.55	0.53	56	60273	58	11	38	9	46
TMR_00579	tmRNA links to Rfam database...	0.27	0.31	0.24	28	80484	99	20	69	10	62
TMR_00580	tmRNA links to Rfam database...	0.31	0.31	0.30	31	60624	78	15	56	7	69
TMR_00581	tmRNA links to Rfam database...	0.15	0.15	0.14	15	62374	99	13	79	7	83
TMR_00584	tmRNA links to Rfam database...	0.40	0.42	0.38	41	60966	74	9	59	6	56
TMR_00586	tmRNA links to Rfam database...	0.36	0.37	0.35	36	60972	68	12	55	1	61
TMR_00587	tmRNA links to Rfam database...	0.76	0.75	0.77	75	61328	28	4	18	6	25
TMR_00588	tmRNA links to Rfam database...	0.29	0.31	0.27	31	77307	92	20	63	9	70
TMR_00594	tmRNA links to Rfam database...	0.22	0.23	0.20	24	79283	99	19	75	5	80
TMR_00596	tmRNA links to Rfam database...	0.21	0.23	0.20	22	78100	101	17	71	13	73
TMR_00599	tmRNA links to Rfam database...	0.15	0.18	0.13	13	63090	94	38	49	7	59
TMR_00600	tmRNA links to Rfam database...	0.19	0.19	0.19	22	79684	96	18	76	2	93
TMR_00601	tmRNA links to Rfam database...	0.35	0.38	0.33	16	58947	79	10	23	46	26
TMR_00603	tmRNA links to Rfam database...	0.64	0.65	0.64	28	60334	78	7	9	62	15
TMR_00604	tmRNA links to Rfam database...	0.62	0.63	0.63	70	62723	48	5	37	6	42
TMR_00605	tmRNA links to Rfam database...	0.44	0.45	0.43	49	74191	67	17	48	2	59
TMR_00606	tmRNA links to Rfam database...	0.51	0.52	0.50	56	68893	66	8	49	9	51
TMR_00609	tmRNA links to Rfam database...	0.65	0.65	0.65	74	63433	44	8	31	5	39
TMR_00610	tmRNA links to Rfam database...	0.62	0.63	0.61	65	62021	54	7	35	12	39
TMR_00611	tmRNA links to Rfam database...	0.62	0.63	0.61	64	61320	47	8	33	6	38
TMR_00612	tmRNA links to Rfam database...	0.40	0.41	0.38	43	60614	74	9	60	5	61
TMR_00614	tmRNA links to Rfam database...	0.30	0.30	0.30	31	60971	79	8	65	6	73
TMR_00615	tmRNA links to Rfam database...	0.31	0.32	0.30	31	63799	83	15	58	10	65
TMR_00616	tmRNA links to Rfam database...	0.26	0.27	0.25	27	67055	83	21	58	4	72
TMR_00617	tmRNA links to Rfam database...	0.38	0.43	0.34	25	34642	54	16	33	5	33
TMR_00623	tmRNA links to Rfam database...	0.49	0.48	0.49	52	61319	63	1	53	9	56
TMR_00624	tmRNA links to Rfam database...	0.42	0.44	0.41	47	62366	78	3	65	10	61
TMR_00625	tmRNA links to Rfam database...	0.21	0.23	0.21	24	78886	97	26	67	4	82
TMR_00626	tmRNA links to Rfam database...	0.39	0.40	0.38	44	67780	78	12	60	6	65
TMR_00680	tmRNA links to Rfam database...	0.23	0.25	0.21	25	67777	94	21	73	0	74
TMR_00681	tmRNA links to Rfam database...	0.47	0.47	0.47	46	65969	61	8	43	10	51
TMR_00683	tmRNA links to Rfam database...	0.16	0.17	0.14	17	82910	111	16	85	10	83
TMR_00686	tmRNA links to Rfam database...	0.47	0.48	0.47	52	71142	73	13	46	14	56
TMR_00687	tmRNA links to Rfam database...	0.35	0.35	0.35	39	71518	85	6	68	11	72
TMR_00696	tmRNA links to Rfam database...	0.20	0.22	0.19	25	84946	116	29	78	9	89
TMR_00698	tmRNA links to Rfam database...	0.51	0.50	0.51	52	63089	52	11	38	3	52
TMR_00699	tmRNA links to Rfam database...	0.33	0.34	0.32	35	67053	77	12	61	4	67
TMR_00702	tmRNA links to Rfam database...	0.56	0.57	0.55	57	67057	52	15	32	5	43
TMR_00703	tmRNA links to Rfam database...	0.26	0.26	0.25	26	67426	82	9	67	6	73
TMR_00706	tmRNA links to Rfam database...	0.52	0.52	0.52	54	66327	53	7	42	4	49
TMR_00711	tmRNA links to Rfam database...	0.53	0.55	0.51	54	67791	57	17	34	6	44
TMR_00712	tmRNA links to Rfam database...	0.28	0.29	0.26	32	78485	96	16	73	7	77
TMR_00716	tmRNA links to Rfam database...	0.18	0.19	0.17	19	62723	93	18	75	0	81

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Matthews Correlation Coeffient, Sensitivity and Positive Predictive Value have been calculated based on the paper by Gardener & Giegerich, 2004.

Table of contents:

Overview

Performance plots

Performance of UNAFold - scored higher in this pairwise comparison

1. Total counts & total scores for UNAFold

2. Individual counts for UNAFold [ download as .csv ]

Performance of RNAsubopt - scored lower in this pairwise comparison

1. Total counts & total scores for RNAsubopt

2. Individual counts for RNAsubopt [ download as .csv ]