CompaRNA - on-line benchmarks of RNA structure prediction methods

Laboratory of Structural Bioinformatics @ Adam Mickiewicz University in Poznan

Home

Methods

Datasets

Rankings

RNA 2D Atlas

Help

FAQ

Contact us

RSS feeds

Twitter

Overview

Metric	UNAFold		Afold
MCC	0.374	>	0.371
Average MCC ± 95% Confidence Intervals	0.372 ± 0.019	>	0.364 ± 0.019
Sensitivity	0.373	>	0.371
Positive Predictive Value	0.375	>	0.370
Total TP	33857	>	33727
Total TN	321827856	>	321826899
Total FP	71802	<	73392
Total FP CONTRA	9538	<	9579
Total FP INCONS	46794	<	47840
Total FP COMP	15470	<	15973
Total FN	56959	<	57089
P-value	3.56938820447e-08

^top

Performance plots

Comparison of performance of UNAFold and Afold. Positive Predictive Value (PPV) is plotted against sensitivity. Each dot represents a single test of each method. See tables below for raw data (individual counts for UNAFold and Afold).
Average Matthews Correlation Coefficients (MCC) with 95% confidence intervals (CIs) were plotted for different RNA families, for which at least 3 members were present in the benchmarking dataset. 'n' denotes the number of MCCs used to calculate the average and CI. See tables below for raw data (individual counts for UNAFold and Afold).
Comparison of average Matthews Correlation Coefficients (MCCs) for UNAFold and Afold. The whiskers correspond to 95% confidence intervals (CIs). 'n' denotes the number of MCCs used to calculate average MCCs and CIs. See tables below for raw data (individual counts for UNAFold and Afold).

^top

Performance of UNAFold - scored higher in this pairwise comparison

1. Total counts & total scores for UNAFold

Total Base Pair Counts
Total TP	33857
Total TN	321827856
Total FP	71802
Total FP CONTRA	9538
Total FP INCONS	46794
Total FP COMP	15470
Total FN	56959

Total Scores
MCC	0.374
Average MCC ± 95% Confidence Intervals	0.372 ± 0.019
Sensitivity	0.373
Positive Predictive Value	0.375
Nr of predictions	220

^top

2. Individual counts for UNAFold [ download as .csv ]

RNA Chain	Rfam family	MCC	SENS	PPV	TP	TN	FP	FP CONTRA	FP INCONS	FP COMP	FN
CRW_00001	-	0.45	0.44	0.46	93	3173737	661	15	95	551	116
CRW_00002	-	0.55	0.54	0.56	143	408803	127	31	83	13	121
CRW_00024	SSU_rRNA_archaea links to Rfam database...	0.77	0.76	0.78	347	1085158	132	19	77	36	111
CRW_00048	SSU_rRNA_bacteria links to Rfam database...	0.52	0.51	0.53	241	1170762	229	24	188	17	229
CRW_00054	SSU_rRNA_bacteria links to Rfam database...	0.44	0.43	0.44	195	1107376	258	28	217	13	261
CRW_00059	SSU_rRNA_bacteria links to Rfam database...	0.49	0.48	0.50	227	1172295	238	32	192	14	246
CRW_00061	SSU_rRNA_bacteria links to Rfam database...	0.51	0.51	0.52	241	1181493	233	41	178	14	235
CRW_00068	SSU_rRNA_bacteria links to Rfam database...	0.46	0.46	0.47	209	1108862	250	23	211	16	248
CRW_00096	SSU_rRNA_bacteria links to Rfam database...	0.55	0.54	0.55	250	1178428	227	29	173	25	215
CRW_00140	SSU_rRNA_bacteria links to Rfam database...	0.66	0.65	0.67	303	1135826	172	19	130	23	160
CRW_00141	SSU_rRNA_bacteria links to Rfam database...	0.58	0.58	0.59	275	1201557	219	25	168	26	201
CRW_00150	SSU_rRNA_bacteria links to Rfam database...	0.41	0.41	0.42	190	1152471	280	32	228	20	276
CRW_00152	SSU_rRNA_bacteria links to Rfam database...	0.65	0.63	0.66	299	1179965	174	29	123	22	172
CRW_00166	SSU_rRNA_bacteria links to Rfam database...	0.45	0.44	0.45	207	1190736	269	34	219	16	261
CRW_00173	SSU_rRNA_bacteria links to Rfam database...	0.28	0.28	0.29	126	1082215	327	39	276	12	319
CRW_00177	SSU_rRNA_bacteria links to Rfam database...	0.51	0.49	0.53	234	1178440	221	29	177	15	239
CRW_00196	SSU_rRNA_bacteria links to Rfam database...	0.45	0.44	0.45	211	1207765	281	32	227	22	264
CRW_00230	SSU_rRNA_bacteria links to Rfam database...	0.55	0.54	0.57	256	1198474	218	27	169	22	222
CRW_00245	SSU_rRNA_bacteria links to Rfam database...	0.36	0.36	0.37	163	1105885	293	45	235	13	290
CRW_00248	SSU_rRNA_bacteria links to Rfam database...	0.58	0.57	0.58	276	1218667	230	24	174	32	208
CRW_00250	SSU_rRNA_bacteria links to Rfam database...	0.39	0.39	0.39	186	1198451	301	43	246	12	292
CRW_00256	SSU_rRNA_bacteria links to Rfam database...	0.50	0.49	0.52	228	1192304	228	35	173	20	240
CRW_00270	SSU_rRNA_bacteria links to Rfam database...	0.47	0.45	0.48	207	1111853	250	29	197	24	248
CRW_00271	SSU_rRNA_bacteria links to Rfam database...	0.48	0.47	0.50	217	1122314	236	33	187	16	245
CRW_00273	SSU_rRNA_bacteria links to Rfam database...	0.51	0.50	0.52	222	1085175	222	28	176	18	224
CRW_00275	SSU_rRNA_bacteria links to Rfam database...	0.68	0.68	0.69	310	1114822	160	19	120	21	147
CRW_00277	SSU_rRNA_bacteria links to Rfam database...	0.35	0.34	0.35	154	1110361	293	42	238	13	299
CRW_00278	SSU_rRNA_bacteria links to Rfam database...	0.43	0.41	0.44	186	1129832	259	29	209	21	264
CRW_00279	SSU_rRNA_bacteria links to Rfam database...	0.44	0.42	0.45	197	1179977	258	31	211	16	267
CRW_00280	SSU_rRNA_bacteria links to Rfam database...	0.68	0.67	0.68	302	1117819	159	19	120	20	151
CRW_00281	SSU_rRNA_bacteria links to Rfam database...	0.65	0.63	0.67	291	1144909	165	18	123	24	173
CRW_00283	SSU_rRNA_bacteria links to Rfam database...	0.25	0.24	0.25	103	1015621	323	37	264	22	329
CRW_00284	SSU_rRNA_bacteria links to Rfam database...	0.29	0.28	0.29	129	1131319	325	39	273	13	327
CRW_00285	SSU_rRNA_bacteria links to Rfam database...	0.75	0.74	0.76	338	1117818	130	22	82	26	120
CRW_00289	SSU_rRNA_bacteria links to Rfam database...	0.44	0.43	0.45	203	1189200	274	30	220	24	273
CRW_00292	SSU_rRNA_bacteria links to Rfam database...	0.41	0.40	0.43	184	1123823	255	41	202	12	277
CRW_00294	-	0.31	0.33	0.29	191	2620252	546	107	355	84	395
CRW_00298	SSU_rRNA_eukarya links to Rfam database...	0.22	0.23	0.22	114	1620379	443	82	325	36	380
CRW_00301	SSU_rRNA_eukarya links to Rfam database...	0.31	0.31	0.30	163	1761959	431	87	294	50	356
CRW_00310	SSU_rRNA_eukarya links to Rfam database...	0.26	0.27	0.26	141	1805406	466	81	322	63	380
CRW_00326	SSU_rRNA_eukarya links to Rfam database...	0.35	0.35	0.35	176	1627600	377	65	269	43	326
CRW_00330	SSU_rRNA_eukarya links to Rfam database...	0.29	0.31	0.28	158	1988457	459	73	327	59	359
CRW_00332	SSU_rRNA_eukarya links to Rfam database...	0.21	0.22	0.20	104	1769488	470	103	326	41	373
CRW_00333	SSU_rRNA_eukarya links to Rfam database...	0.33	0.33	0.32	169	1891961	426	77	278	71	345
CRW_00338	-	0.15	0.16	0.14	64	1052953	413	75	334	4	331
CRW_00345	SSU_rRNA_eukarya links to Rfam database...	0.27	0.28	0.27	138	1586355	422	75	303	44	360
CRW_00348	SSU_rRNA_eukarya links to Rfam database...	0.26	0.26	0.26	131	1615002	412	57	313	42	372
CRW_00358	SSU_rRNA_eukarya links to Rfam database...	0.39	0.39	0.39	200	1674848	370	67	250	53	307
CRW_00366	SSU_rRNA_eukarya links to Rfam database...	0.33	0.35	0.32	167	1579237	391	83	266	42	315
CRW_00370	SSU_rRNA_eukarya links to Rfam database...	0.25	0.26	0.25	130	1640246	437	74	316	47	376
CRW_00371	SSU_rRNA_eukarya links to Rfam database...	0.31	0.32	0.30	159	1611384	399	75	292	32	337
CRW_00372	SSU_rRNA_eukarya links to Rfam database...	0.36	0.36	0.36	180	1625800	366	59	267	40	318
CRW_00374	-	0.44	0.44	0.44	244	2182449	395	57	255	83	306
CRW_00375	-	0.28	0.29	0.27	158	2298864	499	77	341	81	383
CRW_00379	SSU_rRNA_eukarya links to Rfam database...	0.40	0.40	0.39	215	2126404	429	56	278	95	319
CRW_00381	-	0.30	0.31	0.30	174	2303144	499	73	340	86	383
CRW_00386	SSU_rRNA_eukarya links to Rfam database...	0.25	0.27	0.24	137	1750675	476	78	366	32	378
CRW_00400	-	0.19	0.20	0.18	98	2677906	616	88	363	165	396
CRW_00403	SSU_rRNA_eukarya links to Rfam database...	0.31	0.31	0.30	146	1606048	418	64	270	84	318
CRW_00411	SSU_rRNA_eukarya links to Rfam database...	0.27	0.28	0.27	138	1614990	413	60	315	38	358
CRW_00414	SSU_rRNA_eukarya links to Rfam database...	0.30	0.31	0.29	154	1665688	426	77	306	43	341
CRW_00417	-	0.39	0.38	0.40	99	458154	161	21	129	11	163
CRW_00418	-	0.22	0.20	0.24	52	441115	174	21	142	11	208
CRW_00419	-	0.20	0.18	0.21	49	463930	194	17	170	7	216
CRW_00421	-	0.31	0.30	0.33	79	462964	173	28	132	13	187
CRW_00422	-	0.37	0.36	0.38	95	455287	170	24	129	17	168
CRW_00426	-	0.34	0.33	0.35	88	457193	175	23	142	10	177
CRW_00427	-	0.21	0.21	0.22	54	454337	205	33	157	15	207
CRW_00428	-	0.38	0.38	0.38	98	465840	170	32	125	13	162
CRW_00430	-	0.45	0.42	0.49	112	456262	128	20	96	12	154
CRW_00433	-	0.29	0.26	0.32	68	467817	148	21	122	5	195
CRW_00434	-	0.31	0.29	0.33	75	457220	157	19	132	6	188
CRW_00435	-	0.45	0.42	0.49	110	451500	126	9	106	11	155
CRW_00437	-	0.21	0.21	0.22	54	456247	191	23	166	2	206
CRW_00438	-	0.34	0.32	0.37	87	454343	161	16	135	10	181
CRW_00441	-	0.17	0.16	0.18	42	454353	190	32	154	4	220
CRW_00442	-	0.38	0.36	0.40	94	453393	149	25	116	8	167
CRW_00443	-	0.38	0.36	0.41	93	456264	154	19	114	21	167
CRW_00444	-	0.30	0.29	0.32	76	459122	172	24	139	9	187
CRW_00445	-	0.30	0.28	0.33	75	458173	164	23	132	9	190
CRW_00446	-	0.36	0.33	0.38	88	468765	157	17	126	14	177
CRW_00447	-	0.33	0.32	0.35	82	452443	167	16	135	16	178
CRW_00448	-	0.34	0.33	0.36	85	457211	168	28	122	18	176
CRW_00449	-	0.15	0.15	0.16	38	444860	198	34	164	0	222
CRW_00451	-	0.24	0.22	0.26	59	457222	181	21	144	16	205
CRW_00452	-	0.29	0.26	0.31	69	453407	169	26	126	17	193
CRW_00453	-	0.23	0.21	0.24	56	452447	180	35	138	7	205
CRW_00458	-	0.46	0.44	0.48	115	464891	141	21	103	17	149
CRW_00459	-	0.55	0.51	0.58	135	462008	117	16	82	19	128
CRW_00460	-	0.30	0.30	0.30	161	1972561	446	49	320	77	383
CRW_00462	-	0.18	0.16	0.19	43	458180	198	21	159	18	218
CRW_00463	-	0.39	0.38	0.40	97	445799	154	21	123	10	157
CRW_00464	-	0.38	0.35	0.42	92	462021	139	14	114	11	172
CRW_00466	SSU_rRNA_bacteria links to Rfam database...	0.59	0.58	0.61	265	1116332	195	23	145	27	193
CRW_00474	-	0.45	0.44	0.45	371	3976793	477	67	379	31	465
CRW_00476	-	0.37	0.37	0.37	323	4278391	590	78	483	29	556
CRW_00487	-	0.48	0.47	0.49	409	4223041	450	72	349	29	463
CRW_00488	-	0.36	0.36	0.37	318	4325352	560	78	463	19	568
CRW_00490	-	0.40	0.39	0.40	339	4144915	541	70	436	35	523
CRW_00496	-	0.42	0.41	0.43	354	4194028	503	59	415	29	512
CRW_00497	-	0.40	0.40	0.40	329	4402212	539	70	417	52	493
CRW_00499	-	0.40	0.39	0.40	343	4372553	528	65	442	21	540
CRW_00503	-	0.41	0.41	0.42	354	4252133	529	73	426	30	513
CRW_00507	-	0.32	0.32	0.32	278	4173747	595	64	516	15	587
CRW_00509	-	0.46	0.45	0.48	392	4182454	467	68	364	35	475
CRW_00511	-	0.37	0.36	0.37	309	4107578	542	55	469	18	547
CRW_00512	-	0.50	0.50	0.51	409	3814897	424	61	336	27	410
CRW_00518	-	0.25	0.25	0.26	220	4357775	642	74	559	9	664
CRW_00519	-	0.55	0.55	0.54	461	4246298	452	57	339	56	371
CRW_00521	-	0.32	0.31	0.32	265	4136305	581	77	479	25	579
CRW_00525	-	0.30	0.31	0.28	254	4058917	690	83	571	36	559
CRW_00530	-	0.26	0.28	0.25	74	534802	233	55	164	14	194
CRW_00532	-	0.15	0.16	0.14	42	579121	281	61	202	18	223
CRW_00534	-	0.30	0.31	0.29	149	1832140	399	78	288	33	334
CRW_00535	-	0.26	0.28	0.25	91	898105	293	66	208	19	237
CRW_00538	-	0.19	0.20	0.18	59	811850	285	65	201	19	241
CRW_00545	-	0.19	0.21	0.17	40	1343749	405	57	134	214	153
CRW_00547	-	0.46	0.46	0.47	397	4278426	479	61	391	27	466
CRW_00589	SSU_rRNA_bacteria links to Rfam database...	0.28	0.27	0.29	121	1094037	315	38	264	13	324
CRW_00590	SSU_rRNA_bacteria links to Rfam database...	0.35	0.34	0.37	153	1119337	287	30	236	21	299
CRW_00591	SSU_rRNA_bacteria links to Rfam database...	0.56	0.54	0.58	243	1098483	208	22	155	31	203
CRW_00594	-	0.23	0.24	0.22	94	1028460	369	47	294	28	301
CRW_00596	-	0.21	0.22	0.20	85	1024169	356	69	273	14	301
CRW_00598	SSU_rRNA_eukarya links to Rfam database...	0.36	0.37	0.35	183	1665703	391	62	277	52	308
CRW_00599	-	0.35	0.36	0.34	195	3754588	700	77	310	313	351
CRW_00604	-	0.82	0.86	0.79	70	411689	188	10	9	169	11
CRW_00606	-	0.87	0.84	0.91	77	559068	251	0	8	243	15
CRW_00607	-	0.54	0.53	0.55	41	536056	268	10	23	235	36
CRW_00617	-	0.41	0.45	0.38	29	426349	237	15	33	189	35
CRW_00678	-	0.41	0.45	0.37	55	666287	299	23	70	206	66
CRW_00684	-	0.35	0.37	0.32	50	612016	279	36	69	174	85
CRW_00704	-	0.80	0.79	0.82	74	386670	190	4	12	174	20
CRW_00706	-	0.37	0.41	0.34	24	695539	343	11	36	296	35
CRW_00708	-	0.49	0.65	0.37	43	3457019	742	55	18	669	23
CRW_00709	-	0.23	0.22	0.24	19	1728790	569	8	53	508	66
CRW_00710	-	0.66	0.65	0.67	74	1040293	368	8	28	332	40
CRW_00711	-	0.28	0.30	0.26	37	2318636	603	35	73	495	87
CRW_00712	-	0.46	0.53	0.40	57	952749	364	30	54	280	51
CRW_00713	-	0.67	0.65	0.69	66	731349	298	5	25	268	35
CRW_00723	-	0.46	0.57	0.37	42	1583195	497	40	33	424	32
CRW_00725	-	0.45	0.51	0.40	89	1957011	506	34	97	375	85
CRW_00730	-	0.51	0.55	0.48	88	338891	172	28	69	75	73
CRW_00732	-	0.36	0.44	0.28	52	3401953	710	70	61	579	65
CRW_00734	-	0.19	0.25	0.15	27	536983	264	76	80	108	83
CRW_00735	-	0.26	0.37	0.18	45	677784	313	116	85	112	76
CRW_00740	-	0.01	0.02	0.01	2	489366	281	77	110	94	111
CRW_00742	-	0.42	0.49	0.36	83	1723063	498	56	94	348	85
CRW_00744	-	0.71	0.78	0.65	145	3433288	702	37	40	625	41
CRW_00745	-	0.41	0.48	0.36	74	1343772	403	51	83	269	80
CRW_00746	-	0.55	0.58	0.52	128	550477	181	33	87	61	91
CRW_00747	-	0.16	0.18	0.15	34	3722125	790	49	148	593	154
CRW_00750	-	0.39	0.44	0.35	70	709638	293	37	91	165	90
CRW_00752	-	0.34	0.41	0.28	76	2975313	664	68	123	473	108
CRW_00753	-	0.07	0.07	0.06	13	489343	289	36	163	90	165
CRW_00758	SSU_rRNA_eukarya links to Rfam database...	0.28	0.29	0.27	138	1640264	418	60	304	54	345
CRW_00759	SSU_rRNA_eukarya links to Rfam database...	0.23	0.24	0.22	117	1636617	466	66	345	55	364
CRW_00760	SSU_rRNA_eukarya links to Rfam database...	0.31	0.31	0.32	151	1638482	393	57	265	71	335
CRW_00761	-	0.20	0.21	0.19	98	2863901	663	82	340	241	376
CRW_00763	SSU_rRNA_bacteria links to Rfam database...	0.29	0.27	0.30	122	1215612	330	26	260	44	324
CRW_00766	-	0.23	0.22	0.23	53	440165	188	28	145	15	187
CRW_00768	-	0.56	0.54	0.58	141	471663	124	14	88	22	118
CRW_00769	-	0.37	0.35	0.39	88	451499	151	24	114	13	164
CRW_00772	SSU_rRNA_bacteria links to Rfam database...	0.25	0.25	0.26	101	945612	317	39	248	30	303
CRW_00774	-	0.34	0.32	0.37	85	488335	171	20	126	25	178
CRW_00778	SSU_rRNA_bacteria links to Rfam database...	0.32	0.32	0.33	123	1201647	309	46	209	54	261
CRW_00779	-	0.29	0.28	0.29	120	1031355	310	39	252	19	302
CRW_00780	-	0.36	0.35	0.37	89	475561	163	24	126	13	166
CRW_00781	-	0.18	0.20	0.17	90	1978527	535	77	361	97	360
CRW_00783	-	0.35	0.34	0.36	87	453385	167	15	141	11	172
CRW_00784	-	0.34	0.33	0.36	86	456249	169	29	126	14	176
CRW_00785	-	0.30	0.29	0.32	73	452445	165	31	127	7	180
CRW_00787	-	0.23	0.24	0.23	72	646633	257	40	208	9	234
CRW_00788	-	0.35	0.36	0.34	131	1758365	426	62	192	172	230
CRW_00789	SSU_rRNA_bacteria links to Rfam database...	0.34	0.33	0.34	147	1137356	300	35	248	17	300
CRW_00790	-	0.16	0.17	0.15	74	1803544	496	75	357	64	373
CRW_00792	-	0.24	0.26	0.23	99	1581092	444	81	259	104	284
CRW_00793	-	0.32	0.33	0.31	124	1048682	323	53	217	53	253
CRW_00794	-	0.23	0.23	0.23	56	434530	209	20	172	17	190
CRW_00795	SSU_rRNA_bacteria links to Rfam database...	0.19	0.20	0.19	78	1152508	377	53	282	42	316
CRW_00796	-	0.25	0.23	0.26	55	384793	177	24	131	22	180
CRW_00797	-	0.29	0.29	0.29	98	692914	265	38	203	24	244
CRW_00800	SSU_rRNA_eukarya links to Rfam database...	0.51	0.51	0.52	238	1401519	271	33	185	53	232
CRW_00801	-	0.46	0.45	0.46	113	438272	150	28	103	19	136
CRW_00802	-	0.25	0.24	0.25	61	460079	192	36	144	12	192
CRW_00804	-	0.34	0.34	0.33	137	1420043	397	43	232	122	266
CRW_00807	-	0.25	0.26	0.25	102	1391535	411	56	253	102	296
CRW_00808	-	0.20	0.21	0.19	74	1301303	411	68	246	97	282
CRW_00849	SSU_rRNA_bacteria links to Rfam database...	0.48	0.48	0.49	225	1117800	258	25	210	23	245
CRW_01134	-	0.34	0.33	0.34	142	964943	281	42	228	11	285
CRW_01153	SSU_rRNA_eukarya links to Rfam database...	0.25	0.25	0.25	128	1606016	421	65	319	37	375
CRW_01168	-	0.33	0.33	0.33	136	900740	294	43	234	17	275
CRW_01171	SSU_rRNA_eukarya links to Rfam database...	0.24	0.24	0.24	123	1593484	433	84	314	35	383
CRW_01186	-	0.23	0.23	0.23	89	836190	303	44	248	11	297
CRW_01188	-	0.11	0.11	0.11	42	837482	347	50	291	6	351
CRW_01189	-	0.19	0.19	0.19	74	862254	323	55	258	10	318
CRW_01214	-	0.35	0.33	0.36	135	931923	248	39	198	11	270
CRW_01222	-	0.24	0.24	0.25	96	912886	298	54	240	4	301
CRW_01250	-	0.24	0.23	0.24	87	781517	284	38	233	13	291
CRW_01260	-	0.14	0.13	0.14	52	912906	325	45	273	7	341
CRW_01266	-	0.24	0.24	0.24	91	818175	306	39	255	12	290
CRW_01275	-	0.32	0.32	0.32	139	1082223	310	46	248	16	293
CRW_01283	-	0.37	0.36	0.38	149	963574	261	40	203	18	260
CRW_01300	SSU_rRNA_eukarya links to Rfam database...	0.37	0.37	0.36	193	1693178	383	91	258	34	322
CRW_01314	-	0.23	0.22	0.24	91	937383	301	38	253	10	316
CRW_01343	SSU_rRNA_archaea links to Rfam database...	0.35	0.35	0.35	151	977475	287	44	231	12	283
CRW_01344	-	0.34	0.33	0.34	122	791557	238	42	190	6	244
CRW_01456	-	0.29	0.30	0.29	253	4240458	631	87	530	14	598
PDB_00401	-	0.47	0.43	0.50	413	3996557	440	40	368	32	540
PDB_00675	-	0.42	0.39	0.45	381	4167987	491	39	421	31	593
PDB_00703	SSU_rRNA_bacteria links to Rfam database...	0.54	0.52	0.57	258	1073389	221	20	178	23	237
PDB_00704	-	0.52	0.48	0.56	465	4249241	401	49	315	37	508
PDB_00805	-	0.64	0.61	0.68	184	467756	111	11	77	23	118
PDB_00854	SSU_rRNA_bacteria links to Rfam database...	0.54	0.53	0.54	285	1500255	284	22	216	46	250
PDB_01088	SSU_rRNA_bacteria links to Rfam database...	0.39	0.37	0.41	202	1470973	322	44	251	27	345
PDB_01103	SSU_rRNA_bacteria links to Rfam database...	0.59	0.58	0.60	324	1605991	243	32	181	30	238
PDB_01105	SSU_rRNA_bacteria links to Rfam database...	0.60	0.58	0.61	315	1433457	227	14	185	28	225
PDB_01120	SSU_rRNA_bacteria links to Rfam database...	0.47	0.44	0.50	232	1204667	242	27	202	13	295
PDB_01140	-	0.51	0.49	0.53	457	4176627	454	58	353	43	473
PDB_01261	-	0.50	0.45	0.55	152	467750	130	4	122	4	184
PDB_01273	SSU_rRNA_bacteria links to Rfam database...	0.50	0.48	0.53	235	1117815	238	14	196	28	256

^top

Performance of Afold - scored lower in this pairwise comparison

1. Total counts & total scores for Afold

Total Base Pair Counts
Total TP	33727
Total TN	321826899
Total FP	73392
Total FP CONTRA	9579
Total FP INCONS	47840
Total FP COMP	15973
Total FN	57089

Total Scores
MCC	0.371
Average MCC ± 95% Confidence Intervals	0.364 ± 0.019
Sensitivity	0.371
Positive Predictive Value	0.370
Nr of predictions	220

^top

2. Individual counts for Afold [ download as .csv ]

RNA Chain	Rfam family	MCC	SENS	PPV	TP	TN	FP	FP CONTRA	FP INCONS	FP COMP	FN
CRW_00001	-	0.48	0.47	0.49	99	3173737	672	15	89	568	110
CRW_00002	-	0.55	0.55	0.55	145	408798	132	32	85	15	119
CRW_00024	SSU_rRNA_archaea links to Rfam database...	0.78	0.77	0.79	351	1085158	132	17	75	40	107
CRW_00048	SSU_rRNA_bacteria links to Rfam database...	0.49	0.49	0.50	228	1170758	252	20	209	23	242
CRW_00054	SSU_rRNA_bacteria links to Rfam database...	0.46	0.46	0.46	208	1107368	260	31	209	20	248
CRW_00059	SSU_rRNA_bacteria links to Rfam database...	0.52	0.51	0.53	240	1172289	233	26	191	16	233
CRW_00061	SSU_rRNA_bacteria links to Rfam database...	0.55	0.54	0.55	259	1181483	231	27	184	20	217
CRW_00068	SSU_rRNA_bacteria links to Rfam database...	0.49	0.49	0.50	226	1108849	247	24	206	17	231
CRW_00096	SSU_rRNA_bacteria links to Rfam database...	0.46	0.46	0.47	214	1178420	264	32	214	18	251
CRW_00140	SSU_rRNA_bacteria links to Rfam database...	0.64	0.63	0.64	291	1135826	182	20	141	21	172
CRW_00141	SSU_rRNA_bacteria links to Rfam database...	0.59	0.58	0.60	274	1201566	212	26	159	27	202
CRW_00150	SSU_rRNA_bacteria links to Rfam database...	0.42	0.41	0.42	193	1152465	282	35	228	19	273
CRW_00152	SSU_rRNA_bacteria links to Rfam database...	0.64	0.62	0.65	293	1179965	180	30	128	22	178
CRW_00166	SSU_rRNA_bacteria links to Rfam database...	0.54	0.53	0.55	248	1190745	226	28	175	23	220
CRW_00173	SSU_rRNA_bacteria links to Rfam database...	0.29	0.29	0.29	127	1082216	323	37	276	10	318
CRW_00177	SSU_rRNA_bacteria links to Rfam database...	0.44	0.43	0.45	203	1178433	259	22	222	15	270
CRW_00196	SSU_rRNA_bacteria links to Rfam database...	0.47	0.46	0.48	220	1207772	267	24	219	24	255
CRW_00230	SSU_rRNA_bacteria links to Rfam database...	0.57	0.56	0.58	266	1198467	216	21	172	23	212
CRW_00245	SSU_rRNA_bacteria links to Rfam database...	0.38	0.38	0.38	172	1105880	289	44	232	13	281
CRW_00248	SSU_rRNA_bacteria links to Rfam database...	0.57	0.57	0.58	274	1218666	234	21	180	33	210
CRW_00250	SSU_rRNA_bacteria links to Rfam database...	0.44	0.44	0.45	210	1198459	274	34	223	17	268
CRW_00256	SSU_rRNA_bacteria links to Rfam database...	0.41	0.40	0.42	188	1192291	278	39	222	17	280
CRW_00270	SSU_rRNA_bacteria links to Rfam database...	0.44	0.43	0.45	196	1111850	260	40	200	20	259
CRW_00271	SSU_rRNA_bacteria links to Rfam database...	0.51	0.50	0.51	231	1122302	237	43	175	19	231
CRW_00273	SSU_rRNA_bacteria links to Rfam database...	0.59	0.58	0.60	258	1085174	195	26	143	26	188
CRW_00275	SSU_rRNA_bacteria links to Rfam database...	0.47	0.47	0.48	213	1114826	258	28	204	26	244
CRW_00277	SSU_rRNA_bacteria links to Rfam database...	0.38	0.38	0.38	172	1110338	300	45	240	15	281
CRW_00278	SSU_rRNA_bacteria links to Rfam database...	0.41	0.40	0.42	180	1129825	274	33	218	23	270
CRW_00279	SSU_rRNA_bacteria links to Rfam database...	0.51	0.49	0.53	229	1179985	227	29	173	25	235
CRW_00280	SSU_rRNA_bacteria links to Rfam database...	0.51	0.50	0.51	227	1117817	231	28	188	15	226
CRW_00281	SSU_rRNA_bacteria links to Rfam database...	0.30	0.30	0.29	138	1144872	347	41	290	16	326
CRW_00283	SSU_rRNA_bacteria links to Rfam database...	0.28	0.27	0.29	118	1015612	321	39	256	26	314
CRW_00284	SSU_rRNA_bacteria links to Rfam database...	0.28	0.27	0.28	124	1131316	337	30	290	17	332
CRW_00285	SSU_rRNA_bacteria links to Rfam database...	0.72	0.71	0.74	325	1117819	142	23	93	26	133
CRW_00289	SSU_rRNA_bacteria links to Rfam database...	0.46	0.45	0.48	214	1189204	258	34	201	23	262
CRW_00292	SSU_rRNA_bacteria links to Rfam database...	0.31	0.30	0.32	138	1123814	315	46	252	17	323
CRW_00294	-	0.26	0.28	0.25	163	2620247	578	92	403	83	423
CRW_00298	SSU_rRNA_eukarya links to Rfam database...	0.19	0.20	0.18	99	1620353	490	81	367	42	395
CRW_00301	SSU_rRNA_eukarya links to Rfam database...	0.30	0.31	0.30	162	1761957	428	86	298	44	357
CRW_00310	SSU_rRNA_eukarya links to Rfam database...	0.29	0.30	0.28	157	1805386	453	81	326	46	364
CRW_00326	SSU_rRNA_eukarya links to Rfam database...	0.41	0.41	0.42	204	1627621	339	47	238	54	298
CRW_00330	SSU_rRNA_eukarya links to Rfam database...	0.32	0.32	0.31	167	1988474	452	69	305	78	350
CRW_00332	SSU_rRNA_eukarya links to Rfam database...	0.18	0.20	0.17	94	1769479	492	105	343	44	383
CRW_00333	SSU_rRNA_eukarya links to Rfam database...	0.29	0.30	0.28	153	1891946	449	74	312	63	361
CRW_00338	-	0.13	0.14	0.12	57	1052947	427	76	346	5	338
CRW_00345	SSU_rRNA_eukarya links to Rfam database...	0.34	0.35	0.33	175	1586340	403	71	285	47	323
CRW_00348	SSU_rRNA_eukarya links to Rfam database...	0.25	0.25	0.24	127	1614982	437	68	326	43	376
CRW_00358	SSU_rRNA_eukarya links to Rfam database...	0.36	0.36	0.35	183	1674845	391	61	276	54	324
CRW_00366	SSU_rRNA_eukarya links to Rfam database...	0.35	0.36	0.33	174	1579230	395	88	261	46	308
CRW_00370	SSU_rRNA_eukarya links to Rfam database...	0.28	0.28	0.28	143	1640248	420	77	298	45	363
CRW_00371	SSU_rRNA_eukarya links to Rfam database...	0.29	0.29	0.28	145	1611389	409	77	299	33	351
CRW_00372	SSU_rRNA_eukarya links to Rfam database...	0.36	0.36	0.35	181	1625787	378	59	279	40	317
CRW_00374	-	0.44	0.45	0.43	246	2182438	413	58	263	92	304
CRW_00375	-	0.27	0.29	0.26	155	2298851	514	78	356	80	386
CRW_00379	SSU_rRNA_eukarya links to Rfam database...	0.42	0.43	0.41	227	2126401	423	55	270	98	307
CRW_00381	-	0.32	0.33	0.31	184	2303138	513	67	342	104	373
CRW_00386	SSU_rRNA_eukarya links to Rfam database...	0.24	0.25	0.23	129	1750683	478	83	361	34	386
CRW_00400	-	0.24	0.25	0.23	125	2677905	618	72	353	193	369
CRW_00403	SSU_rRNA_eukarya links to Rfam database...	0.31	0.31	0.30	146	1606035	431	65	282	84	318
CRW_00411	SSU_rRNA_eukarya links to Rfam database...	0.34	0.34	0.34	169	1615006	381	62	266	53	327
CRW_00414	SSU_rRNA_eukarya links to Rfam database...	0.27	0.28	0.26	140	1665694	436	77	314	45	355
CRW_00417	-	0.38	0.37	0.39	97	458157	161	21	128	12	165
CRW_00418	-	0.24	0.22	0.26	56	441113	170	17	144	9	204
CRW_00419	-	0.19	0.17	0.20	45	463945	187	22	154	11	220
CRW_00421	-	0.38	0.36	0.41	96	462968	155	22	117	16	170
CRW_00422	-	0.36	0.35	0.38	92	455291	171	23	129	19	171
CRW_00426	-	0.30	0.29	0.31	78	457195	183	24	149	10	187
CRW_00427	-	0.18	0.18	0.19	46	454337	212	30	168	14	215
CRW_00428	-	0.39	0.38	0.40	98	465847	162	29	121	12	162
CRW_00430	-	0.18	0.18	0.19	47	456245	207	30	168	9	219
CRW_00433	-	0.35	0.32	0.38	85	467807	142	19	117	6	178
CRW_00434	-	0.38	0.35	0.40	92	457218	146	18	118	10	171
CRW_00435	-	0.36	0.33	0.39	88	451501	148	14	122	12	177
CRW_00437	-	0.21	0.21	0.22	54	456242	197	25	169	3	206
CRW_00438	-	0.35	0.34	0.36	90	454332	170	19	140	11	178
CRW_00441	-	0.17	0.16	0.19	42	454357	187	31	151	5	220
CRW_00442	-	0.37	0.36	0.39	93	453388	156	25	122	9	168
CRW_00443	-	0.39	0.36	0.42	93	456266	153	18	113	22	167
CRW_00444	-	0.27	0.26	0.28	68	459119	181	24	150	7	195
CRW_00445	-	0.28	0.27	0.30	71	458168	175	24	140	11	194
CRW_00446	-	0.46	0.43	0.48	115	468758	135	14	109	12	150
CRW_00447	-	0.27	0.27	0.28	69	452428	194	23	156	15	191
CRW_00448	-	0.34	0.32	0.36	83	457215	169	23	125	21	178
CRW_00449	-	0.22	0.21	0.23	54	444861	185	20	161	4	206
CRW_00451	-	0.21	0.20	0.21	52	457204	204	25	165	14	212
CRW_00452	-	0.31	0.29	0.34	77	453399	174	20	132	22	185
CRW_00453	-	0.34	0.31	0.36	81	452454	150	22	119	9	180
CRW_00458	-	0.32	0.31	0.32	83	464873	185	34	140	11	181
CRW_00459	-	0.29	0.27	0.31	72	462011	176	27	131	18	191
CRW_00460	-	0.27	0.27	0.27	149	1972543	463	72	327	64	395
CRW_00462	-	0.28	0.27	0.30	70	458171	178	16	146	16	191
CRW_00463	-	0.34	0.33	0.35	85	445799	164	22	134	8	169
CRW_00464	-	0.39	0.36	0.42	95	462015	142	15	116	11	169
CRW_00466	SSU_rRNA_bacteria links to Rfam database...	0.60	0.59	0.62	268	1116330	196	21	146	29	190
CRW_00474	-	0.51	0.51	0.50	429	3976751	463	78	352	33	407
CRW_00476	-	0.39	0.40	0.39	349	4278379	577	75	472	30	530
CRW_00487	-	0.55	0.54	0.56	468	4223035	405	51	317	37	404
CRW_00488	-	0.41	0.41	0.41	359	4325336	540	80	436	24	527
CRW_00490	-	0.36	0.36	0.36	312	4144884	592	83	481	28	550
CRW_00496	-	0.42	0.41	0.43	355	4194028	507	59	414	34	511
CRW_00497	-	0.44	0.45	0.44	366	4402200	520	80	382	58	456
CRW_00499	-	0.43	0.42	0.43	370	4372547	511	63	423	25	513
CRW_00503	-	0.35	0.35	0.35	300	4252128	583	76	482	25	567
CRW_00507	-	0.30	0.30	0.30	257	4173750	615	69	529	17	608
CRW_00509	-	0.47	0.46	0.48	403	4182433	475	78	364	33	464
CRW_00511	-	0.34	0.34	0.35	290	4107580	558	57	484	17	566
CRW_00512	-	0.50	0.49	0.50	403	3814904	427	60	336	31	416
CRW_00518	-	0.26	0.25	0.26	224	4357757	657	75	572	10	660
CRW_00519	-	0.53	0.54	0.52	451	4246281	466	64	359	43	381
CRW_00521	-	0.36	0.36	0.36	305	4136289	554	83	449	22	539
CRW_00525	-	0.27	0.29	0.26	238	4058899	721	99	589	33	575
CRW_00530	-	0.35	0.37	0.33	99	534792	223	55	149	19	169
CRW_00532	-	0.12	0.14	0.11	36	579108	293	84	198	11	229
CRW_00534	-	0.29	0.30	0.28	145	1832136	410	68	306	36	338
CRW_00535	-	0.25	0.27	0.24	89	898092	316	73	216	27	239
CRW_00538	-	0.20	0.22	0.19	65	811827	304	77	206	21	235
CRW_00545	-	0.27	0.29	0.25	56	1343756	374	51	117	206	137
CRW_00547	-	0.47	0.47	0.47	406	4278413	487	64	392	31	457
CRW_00589	SSU_rRNA_bacteria links to Rfam database...	0.18	0.18	0.18	78	1094024	374	34	324	16	367
CRW_00590	SSU_rRNA_bacteria links to Rfam database...	0.36	0.36	0.37	161	1119326	290	30	239	21	291
CRW_00591	SSU_rRNA_bacteria links to Rfam database...	0.57	0.56	0.59	251	1098476	205	23	153	29	195
CRW_00594	-	0.22	0.24	0.20	93	1028441	382	52	309	21	302
CRW_00596	-	0.21	0.22	0.21	86	1024181	349	55	274	20	300
CRW_00598	SSU_rRNA_eukarya links to Rfam database...	0.31	0.33	0.29	162	1665675	440	88	300	52	329
CRW_00599	-	0.33	0.34	0.32	187	3754579	730	79	325	326	359
CRW_00604	-	0.52	0.57	0.48	46	411682	214	15	35	164	35
CRW_00606	-	0.66	0.64	0.68	59	559066	266	2	26	238	33
CRW_00607	-	0.55	0.53	0.56	41	536057	274	4	28	242	36
CRW_00617	-	0.66	0.64	0.68	41	426366	236	1	18	217	23
CRW_00678	-	0.66	0.64	0.67	78	666318	274	10	29	235	43
CRW_00684	-	0.34	0.39	0.29	53	611990	298	44	84	170	82
CRW_00704	-	0.81	0.80	0.82	75	386669	198	4	12	182	19
CRW_00706	-	0.45	0.51	0.39	30	695534	340	11	35	294	29
CRW_00708	-	0.24	0.39	0.15	26	3456960	728	99	50	579	40
CRW_00709	-	0.07	0.07	0.07	6	1728778	562	20	66	476	79
CRW_00710	-	0.66	0.65	0.67	74	1040293	375	8	28	339	40
CRW_00711	-	0.13	0.14	0.12	17	2318640	641	36	88	517	107
CRW_00712	-	0.47	0.54	0.41	58	952747	370	30	55	285	50
CRW_00713	-	0.56	0.57	0.55	58	731339	313	11	37	265	43
CRW_00723	-	0.27	0.35	0.21	26	1583185	519	41	58	420	48
CRW_00725	-	0.38	0.45	0.33	78	1956995	536	46	112	378	96
CRW_00730	-	0.46	0.52	0.41	84	338869	186	39	84	63	77
CRW_00732	-	0.16	0.23	0.11	27	3401890	751	114	105	532	90
CRW_00734	-	0.18	0.25	0.13	27	536961	263	99	79	85	83
CRW_00735	-	0.26	0.33	0.20	40	677832	298	85	73	140	81
CRW_00740	-	0.00	0.00	0.00	0	489332	297	100	123	74	113
CRW_00742	-	0.43	0.51	0.36	85	1723060	507	56	95	356	83
CRW_00744	-	0.84	0.82	0.86	152	3433333	706	2	23	681	34
CRW_00745	-	0.39	0.45	0.33	69	1343773	422	48	90	284	85
CRW_00746	-	0.45	0.47	0.44	102	550492	206	29	102	75	117
CRW_00747	-	0.13	0.14	0.12	26	3722137	789	49	144	596	162
CRW_00750	-	0.39	0.44	0.35	71	709632	301	38	95	168	89
CRW_00752	-	0.30	0.36	0.26	66	2975322	682	63	129	490	118
CRW_00753	-	0.15	0.16	0.14	29	489341	277	47	138	92	149
CRW_00758	SSU_rRNA_eukarya links to Rfam database...	0.29	0.30	0.29	144	1640268	416	66	288	62	339
CRW_00759	SSU_rRNA_eukarya links to Rfam database...	0.22	0.22	0.21	107	1636633	462	78	327	57	374
CRW_00760	SSU_rRNA_eukarya links to Rfam database...	0.28	0.29	0.28	140	1638458	411	74	283	54	346
CRW_00761	-	0.16	0.18	0.15	83	2863880	708	103	355	250	391
CRW_00763	SSU_rRNA_bacteria links to Rfam database...	0.38	0.37	0.40	165	1215603	304	24	228	52	281
CRW_00766	-	0.27	0.26	0.28	63	440168	177	20	140	17	177
CRW_00768	-	0.40	0.39	0.41	101	471658	164	22	125	17	158
CRW_00769	-	0.39	0.37	0.42	93	451502	148	20	110	18	159
CRW_00772	SSU_rRNA_bacteria links to Rfam database...	0.26	0.25	0.26	103	945610	313	37	250	26	301
CRW_00774	-	0.37	0.36	0.39	94	488322	170	17	133	20	169
CRW_00778	SSU_rRNA_bacteria links to Rfam database...	0.30	0.29	0.32	113	1201668	314	34	210	70	271
CRW_00779	-	0.30	0.30	0.30	126	1031350	307	35	255	17	296
CRW_00780	-	0.18	0.18	0.19	45	475569	201	21	165	15	210
CRW_00781	-	0.22	0.23	0.21	104	1978559	534	49	343	142	346
CRW_00783	-	0.37	0.36	0.38	93	453382	165	15	138	12	166
CRW_00784	-	0.37	0.35	0.39	93	456254	166	21	122	23	169
CRW_00785	-	0.35	0.33	0.36	84	452443	162	27	122	13	169
CRW_00787	-	0.23	0.24	0.23	74	646626	267	36	217	14	232
CRW_00788	-	0.23	0.24	0.22	85	1758363	476	50	252	174	276
CRW_00789	SSU_rRNA_bacteria links to Rfam database...	0.36	0.36	0.36	160	1137342	302	44	240	18	287
CRW_00790	-	0.18	0.19	0.18	85	1803571	519	41	353	125	362
CRW_00792	-	0.23	0.24	0.23	92	1581124	465	54	261	150	291
CRW_00793	-	0.33	0.34	0.33	127	1048686	318	55	208	55	250
CRW_00794	-	0.24	0.24	0.25	59	434543	196	15	161	20	187
CRW_00795	SSU_rRNA_bacteria links to Rfam database...	0.21	0.22	0.21	85	1152511	379	51	274	54	309
CRW_00796	-	0.20	0.20	0.21	47	384777	193	27	152	14	188
CRW_00797	-	0.26	0.26	0.26	90	692907	280	33	223	24	252
CRW_00800	SSU_rRNA_eukarya links to Rfam database...	0.55	0.53	0.57	251	1401532	269	24	168	77	219
CRW_00801	-	0.45	0.45	0.46	112	438270	149	29	105	15	137
CRW_00802	-	0.19	0.19	0.19	49	460062	218	33	176	9	204
CRW_00804	-	0.32	0.32	0.31	130	1420037	396	39	249	108	273
CRW_00807	-	0.41	0.40	0.41	161	1391552	340	38	195	107	237
CRW_00808	-	0.37	0.39	0.35	139	1301292	367	81	179	107	217
CRW_00849	SSU_rRNA_bacteria links to Rfam database...	0.49	0.48	0.49	227	1117798	259	23	212	24	243
CRW_01134	-	0.25	0.26	0.25	109	964912	341	41	293	7	318
CRW_01153	SSU_rRNA_eukarya links to Rfam database...	0.32	0.32	0.32	160	1606024	390	54	290	46	343
CRW_01168	-	0.39	0.39	0.39	160	900739	274	33	221	20	251
CRW_01171	SSU_rRNA_eukarya links to Rfam database...	0.32	0.33	0.31	167	1593473	402	81	284	37	339
CRW_01186	-	0.27	0.27	0.27	103	836190	293	44	234	15	283
CRW_01188	-	0.17	0.17	0.17	68	837466	339	48	283	8	325
CRW_01189	-	0.21	0.21	0.21	82	862242	334	47	270	17	310
CRW_01214	-	0.29	0.29	0.29	116	931900	288	36	243	9	289
CRW_01222	-	0.23	0.23	0.23	92	912871	321	54	259	8	305
CRW_01250	-	0.31	0.30	0.32	115	781518	257	33	209	15	263
CRW_01260	-	0.15	0.15	0.15	60	912885	340	48	283	9	333
CRW_01266	-	0.28	0.28	0.28	108	818174	292	43	235	14	273
CRW_01275	-	0.30	0.30	0.30	128	1082230	316	45	253	18	304
CRW_01283	-	0.40	0.40	0.40	163	963560	265	37	206	22	246
CRW_01300	SSU_rRNA_eukarya links to Rfam database...	0.36	0.37	0.35	189	1693186	392	71	274	47	326
CRW_01314	-	0.28	0.27	0.29	110	937386	284	37	232	15	297
CRW_01343	SSU_rRNA_archaea links to Rfam database...	0.37	0.37	0.37	160	977470	284	42	229	13	274
CRW_01344	-	0.30	0.30	0.30	110	791545	267	40	216	11	256
CRW_01456	-	0.33	0.33	0.32	282	4240460	604	73	513	18	569
PDB_00401	-	0.45	0.42	0.48	400	3996547	462	46	385	31	553
PDB_00675	-	0.44	0.41	0.47	399	4167977	482	45	407	30	575
PDB_00703	SSU_rRNA_bacteria links to Rfam database...	0.53	0.50	0.56	246	1073408	220	17	174	29	249
PDB_00704	-	0.47	0.44	0.51	431	4249217	451	57	365	29	542
PDB_00805	-	0.64	0.61	0.67	184	467752	116	18	74	24	118
PDB_00854	SSU_rRNA_bacteria links to Rfam database...	0.55	0.53	0.56	284	1500271	276	22	201	53	251
PDB_01088	SSU_rRNA_bacteria links to Rfam database...	0.36	0.35	0.37	191	1470959	352	45	275	32	356
PDB_01103	SSU_rRNA_bacteria links to Rfam database...	0.56	0.54	0.58	306	1605999	254	32	191	31	256
PDB_01105	SSU_rRNA_bacteria links to Rfam database...	0.60	0.58	0.63	313	1433471	221	15	172	34	227
PDB_01120	SSU_rRNA_bacteria links to Rfam database...	0.46	0.43	0.49	228	1204659	250	31	210	9	299
PDB_01140	-	0.48	0.46	0.49	432	4176620	490	61	382	47	498
PDB_01261	-	0.50	0.45	0.55	152	467752	128	4	120	4	184
PDB_01273	SSU_rRNA_bacteria links to Rfam database...	0.51	0.48	0.53	237	1117812	242	21	190	31	254

^top

Matthews Correlation Coeffient, Sensitivity and Positive Predictive Value have been calculated based on the paper by Gardener & Giegerich, 2004.

Table of contents:

Overview

Performance plots

Performance of UNAFold - scored higher in this pairwise comparison

1. Total counts & total scores for UNAFold

2. Individual counts for UNAFold [ download as .csv ]

Performance of Afold - scored lower in this pairwise comparison

1. Total counts & total scores for Afold

2. Individual counts for Afold [ download as .csv ]