CompaRNA - on-line benchmarks of RNA structure prediction methods

Laboratory of Structural Bioinformatics @ Adam Mickiewicz University in Poznan

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Overview

Metric	CentroidFold		PknotsRG
MCC	0.526	>	0.428
Average MCC ± 95% Confidence Intervals	0.547 ± 0.012	>	0.465 ± 0.013
Sensitivity	0.459	>	0.427
Positive Predictive Value	0.603	>	0.429
Total TP	53755	>	49982
Total TN	172712299	>	172684904
Total FP	45125	<	78015
Total FP CONTRA	5875	<	11020
Total FP INCONS	29449	<	55472
Total FP COMP	9801	<	11523
Total FN	63233	<	67006
P-value	3.56938820447e-08

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Performance plots

Comparison of performance of CentroidFold and PknotsRG. Positive Predictive Value (PPV) is plotted against sensitivity. Each dot represents a single test of each method. See tables below for raw data (individual counts for CentroidFold and PknotsRG).
Average Matthews Correlation Coefficients (MCC) with 95% confidence intervals (CIs) were plotted for different RNA families, for which at least 3 members were present in the benchmarking dataset. 'n' denotes the number of MCCs used to calculate the average and CI. See tables below for raw data (individual counts for CentroidFold and PknotsRG).
Comparison of average Matthews Correlation Coefficients (MCCs) for CentroidFold and PknotsRG. The whiskers correspond to 95% confidence intervals (CIs). 'n' denotes the number of MCCs used to calculate average MCCs and CIs. See tables below for raw data (individual counts for CentroidFold and PknotsRG).

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Performance of CentroidFold - scored higher in this pairwise comparison

1. Total counts & total scores for CentroidFold

Total Base Pair Counts
Total TP	53755
Total TN	172712299
Total FP	45125
Total FP CONTRA	5875
Total FP INCONS	29449
Total FP COMP	9801
Total FN	63233

Total Scores
MCC	0.526
Average MCC ± 95% Confidence Intervals	0.547 ± 0.012
Sensitivity	0.459
Positive Predictive Value	0.603
Nr of predictions	818

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2. Individual counts for CentroidFold [ download as .csv ]

RNA Chain	Rfam family	MCC	SENS	PPV	TP	TN	FP	FP CONTRA	FP INCONS	FP COMP	FN
ASE_00001	RNaseP_arch links to Rfam database...	0.80	0.76	0.84	57	34123	16	2	9	5	18
ASE_00002	RNaseP_arch links to Rfam database...	0.59	0.55	0.63	40	35448	26	2	21	3	33
ASE_00004	RNaseP_bact_a links to Rfam database...	0.68	0.63	0.73	61	47812	22	9	13	0	36
ASE_00005	RNaseP_bact_a links to Rfam database...	0.66	0.54	0.81	63	57892	15	0	15	0	54
ASE_00006	RNaseP_bact_a links to Rfam database...	0.52	0.48	0.56	45	47505	39	6	30	3	48
ASE_00007	RNaseP_bact_a links to Rfam database...	0.57	0.46	0.70	51	59612	25	0	22	3	59
ASE_00009	RNaseP_arch links to Rfam database...	0.69	0.64	0.74	43	26048	16	0	15	1	24
ASE_00012	RNaseP_bact_a links to Rfam database...	0.54	0.44	0.68	54	73840	32	1	25	6	69
ASE_00014	RNaseP_arch links to Rfam database...	0.56	0.53	0.60	56	54192	40	6	31	3	50
ASE_00017	RNaseP_nuc links to Rfam database...	0.13	0.14	0.13	9	50969	77	15	47	15	55
ASE_00018	RNaseP_bact_a links to Rfam database...	0.65	0.58	0.74	78	80495	29	0	28	1	56
ASE_00020	RNaseP_bact_a links to Rfam database...	0.68	0.60	0.78	75	73824	22	1	20	1	51
ASE_00021	RNaseP_bact_a links to Rfam database...	0.70	0.60	0.81	96	104077	29	2	21	6	64
ASE_00022	RNaseP_bact_b links to Rfam database...	0.32	0.27	0.38	34	82939	60	0	55	5	90
ASE_00023	RNaseP_bact_a links to Rfam database...	0.71	0.65	0.78	82	84150	27	2	21	4	45
ASE_00025	RNaseP_nuc links to Rfam database...	0.38	0.38	0.38	27	78534	96	8	37	51	44
ASE_00026	RNaseP_bact_a links to Rfam database...	0.57	0.47	0.69	52	59610	28	2	21	5	58
ASE_00028	RNaseP_bact_b links to Rfam database...	0.70	0.65	0.76	82	84558	34	4	22	8	44
ASE_00029	RNaseP_bact_a links to Rfam database...	0.68	0.60	0.78	73	82935	21	3	17	1	49
ASE_00030	RNaseP_bact_a links to Rfam database...	0.74	0.66	0.82	96	85374	21	3	18	0	49
ASE_00031	RNaseP_bact_a links to Rfam database...	0.58	0.52	0.65	65	86636	40	2	33	5	61
ASE_00032	RNaseP_bact_a links to Rfam database...	0.51	0.43	0.61	51	80116	35	3	30	2	67
ASE_00033	RNaseP_bact_a links to Rfam database...	0.60	0.45	0.79	55	64910	17	0	15	2	66
ASE_00035	RNaseP_bact_a links to Rfam database...	0.40	0.32	0.50	38	70424	41	2	36	3	80
ASE_00036	RNaseP_bact_a links to Rfam database...	0.62	0.55	0.71	72	75754	31	6	23	2	60
ASE_00037	RNaseP_bact_a links to Rfam database...	0.48	0.35	0.67	38	59283	19	0	19	0	72
ASE_00038	RNaseP_bact_a links to Rfam database...	0.55	0.47	0.65	47	53556	27	4	21	2	54
ASE_00040	RNaseP_bact_a links to Rfam database...	0.15	0.14	0.17	18	78895	94	5	85	4	115
ASE_00041	RNaseP_bact_a links to Rfam database...	0.67	0.53	0.86	57	57564	12	0	9	3	51
ASE_00042	RNaseP_bact_a links to Rfam database...	0.59	0.53	0.66	77	89983	43	1	39	3	68
ASE_00044	RNaseP_bact_a links to Rfam database...	0.69	0.67	0.72	70	54518	32	3	24	5	35
ASE_00046	RNaseP_bact_a links to Rfam database...	0.64	0.46	0.89	47	50350	8	1	5	2	56
ASE_00047	RNaseP_bact_a links to Rfam database...	0.58	0.49	0.70	64	74213	29	1	27	1	66
ASE_00052	RNaseP_bact_a links to Rfam database...	0.68	0.55	0.83	62	61350	16	0	13	3	50
ASE_00053	RNaseP_bact_a links to Rfam database...	0.69	0.62	0.77	82	79294	28	7	18	3	51
ASE_00056	-	0.44	0.40	0.48	29	30815	35	4	28	3	43
ASE_00057	RNaseP_bact_a links to Rfam database...	0.70	0.64	0.75	86	82101	32	8	20	4	48
ASE_00064	RNaseP_bact_a links to Rfam database...	0.66	0.57	0.77	51	45385	25	1	14	10	38
ASE_00066	RNaseP_bact_a links to Rfam database...	0.65	0.56	0.74	73	72292	25	1	24	0	57
ASE_00068	RNaseP_bact_a links to Rfam database...	0.68	0.53	0.87	45	37623	7	0	7	0	40
ASE_00069	RNaseP_bact_a links to Rfam database...	0.64	0.57	0.71	80	82915	35	4	29	2	60
ASE_00074	RNaseP_bact_a links to Rfam database...	0.51	0.49	0.54	58	67789	51	4	45	2	61
ASE_00075	RNaseP_bact_a links to Rfam database...	0.76	0.67	0.86	109	108684	24	2	16	6	53
ASE_00076	RNaseP_bact_a links to Rfam database...	0.50	0.42	0.58	50	68179	38	3	33	2	68
ASE_00077	RNaseP_bact_a links to Rfam database...	0.48	0.34	0.69	29	45108	14	3	10	1	57
ASE_00078	RNaseP_bact_a links to Rfam database...	0.72	0.59	0.88	49	43015	11	0	7	4	34
ASE_00079	RNaseP_bact_a links to Rfam database...	0.55	0.49	0.63	49	55533	30	2	27	1	51
ASE_00080	RNaseP_bact_a links to Rfam database...	0.61	0.50	0.74	61	71549	25	1	20	4	62
ASE_00081	RNaseP_bact_a links to Rfam database...	0.63	0.58	0.68	56	49688	27	5	21	1	41
ASE_00082	RNaseP_bact_a links to Rfam database...	0.79	0.69	0.91	80	70412	18	1	7	10	36
ASE_00083	RNaseP_bact_a links to Rfam database...	0.74	0.64	0.85	70	62399	17	0	12	5	40
ASE_00084	RNaseP_bact_a links to Rfam database...	0.76	0.66	0.88	65	53554	11	2	7	2	34
ASE_00087	RNaseP_bact_a links to Rfam database...	0.76	0.70	0.82	101	88287	23	2	20	1	43
ASE_00089	-	0.55	0.43	0.69	34	31326	15	2	13	0	45
ASE_00090	RNaseP_bact_a links to Rfam database...	0.62	0.59	0.64	60	55517	39	4	30	5	41
ASE_00092	RNaseP_bact_a links to Rfam database...	0.83	0.74	0.92	84	63455	10	1	6	3	29
ASE_00096	RNaseP_bact_a links to Rfam database...	0.72	0.59	0.88	68	63469	11	0	9	2	47
ASE_00099	RNaseP_bact_a links to Rfam database...	0.51	0.47	0.55	56	64519	45	5	40	0	64
ASE_00100	RNaseP_nuc links to Rfam database...	0.25	0.25	0.24	19	82137	103	12	47	44	57
ASE_00102	RNaseP_bact_a links to Rfam database...	0.50	0.40	0.63	67	117748	43	5	35	3	99
ASE_00104	RNaseP_bact_a links to Rfam database...	0.75	0.68	0.84	81	64164	17	2	14	1	38
ASE_00105	RNaseP_bact_a links to Rfam database...	0.56	0.48	0.65	53	64180	31	4	24	3	58
ASE_00107	RNaseP_bact_a links to Rfam database...	0.77	0.69	0.86	87	73052	15	1	13	1	40
ASE_00108	RNaseP_nuc links to Rfam database...	0.53	0.51	0.56	32	46914	52	6	19	27	31
ASE_00111	RNaseP_nuc links to Rfam database...	0.21	0.21	0.21	12	50028	60	14	32	14	45
ASE_00112	RNaseP_bact_a links to Rfam database...	0.82	0.71	0.94	82	75379	12	0	5	7	34
ASE_00115	RNaseP_bact_a links to Rfam database...	0.72	0.68	0.75	69	54523	31	4	19	8	32
ASE_00116	RNaseP_arch links to Rfam database...	0.42	0.32	0.55	21	31588	20	0	17	3	45
ASE_00118	RNaseP_bact_a links to Rfam database...	0.66	0.59	0.75	60	60646	21	2	18	1	42
ASE_00119	RNaseP_bact_a links to Rfam database...	0.75	0.72	0.77	78	62734	26	2	21	3	30
ASE_00120	RNaseP_arch links to Rfam database...	0.66	0.55	0.79	52	46905	14	3	11	0	42
ASE_00121	RNaseP_arch links to Rfam database...	0.29	0.26	0.32	24	45074	53	5	47	1	68
ASE_00122	RNaseP_bact_a links to Rfam database...	0.75	0.65	0.88	57	43300	8	0	8	0	31
ASE_00123	RNaseP_bact_a links to Rfam database...	0.58	0.52	0.65	44	38435	28	1	23	4	41
ASE_00125	RNaseP_bact_a links to Rfam database...	0.78	0.66	0.94	58	39278	7	1	3	3	30
ASE_00126	RNaseP_bact_a links to Rfam database...	0.61	0.56	0.66	46	40400	31	3	21	7	36
ASE_00128	RNaseP_bact_a links to Rfam database...	0.72	0.60	0.87	60	53232	12	1	8	3	40
ASE_00129	RNaseP_bact_a links to Rfam database...	0.72	0.64	0.82	71	62748	19	0	16	3	40
ASE_00131	RNaseP_bact_a links to Rfam database...	0.76	0.64	0.90	54	39280	12	1	5	6	31
ASE_00132	RNaseP_bact_a links to Rfam database...	0.56	0.45	0.69	43	50341	20	2	17	1	52
ASE_00134	RNaseP_bact_a links to Rfam database...	0.46	0.38	0.56	36	50339	28	2	26	0	59
ASE_00135	RNaseP_bact_a links to Rfam database...	0.60	0.51	0.70	56	63110	31	1	23	7	53
ASE_00136	RNaseP_bact_a links to Rfam database...	0.61	0.53	0.70	49	48135	30	1	20	9	43
ASE_00137	RNaseP_bact_a links to Rfam database...	0.80	0.74	0.86	73	48431	13	3	9	1	25
ASE_00138	RNaseP_bact_a links to Rfam database...	0.62	0.49	0.77	40	40418	13	4	8	1	41
ASE_00139	RNaseP_bact_a links to Rfam database...	0.62	0.49	0.80	51	54221	16	0	13	3	53
ASE_00140	RNaseP_bact_a links to Rfam database...	0.73	0.62	0.86	77	70786	14	3	10	1	48
ASE_00142	RNaseP_bact_a links to Rfam database...	0.62	0.57	0.68	70	67058	37	4	29	4	52
ASE_00145	RNaseP_arch links to Rfam database...	0.58	0.56	0.61	62	70023	44	5	35	4	49
ASE_00146	RNaseP_bact_a links to Rfam database...	0.56	0.48	0.66	59	70786	32	6	25	1	65
ASE_00148	RNaseP_arch links to Rfam database...	0.81	0.74	0.88	114	112445	19	4	12	3	40
ASE_00151	RNaseP_bact_a links to Rfam database...	0.46	0.44	0.49	43	51916	44	10	34	0	55
ASE_00153	RNaseP_nuc links to Rfam database...	0.46	0.42	0.51	31	57569	56	5	25	26	42
ASE_00154	RNaseP_arch links to Rfam database...	0.73	0.67	0.78	72	65249	25	2	18	5	35
ASE_00155	RNaseP_arch links to Rfam database...	0.58	0.54	0.62	77	93403	51	6	42	3	65
ASE_00163	RNaseP_bact_a links to Rfam database...	0.34	0.31	0.36	29	53221	60	4	47	9	64
ASE_00165	RNaseP_bact_a links to Rfam database...	0.78	0.69	0.88	70	52895	11	1	9	1	31
ASE_00168	RNaseP_nuc links to Rfam database...	0.32	0.36	0.28	23	60645	74	16	42	16	41
ASE_00169	RNaseP_bact_a links to Rfam database...	0.57	0.50	0.66	53	57211	29	0	27	2	54
ASE_00170	RNaseP_bact_a links to Rfam database...	0.69	0.61	0.78	57	48755	16	3	13	0	36
ASE_00171	RNaseP_bact_a links to Rfam database...	0.74	0.68	0.80	64	48436	16	3	13	0	30
ASE_00172	RNaseP_bact_a links to Rfam database...	0.80	0.72	0.89	76	58911	10	2	7	1	30
ASE_00174	RNaseP_bact_a links to Rfam database...	0.62	0.55	0.71	60	60990	26	6	19	1	49
ASE_00175	RNaseP_bact_a links to Rfam database...	0.37	0.34	0.40	36	59942	55	1	52	2	71
ASE_00176	RNaseP_bact_a links to Rfam database...	0.58	0.51	0.66	56	59946	32	4	25	3	54
ASE_00179	RNaseP_bact_a links to Rfam database...	0.68	0.60	0.78	50	44189	15	3	11	1	34
ASE_00180	RNaseP_bact_a links to Rfam database...	0.75	0.62	0.91	62	51292	11	0	6	5	38
ASE_00181	RNaseP_bact_a links to Rfam database...	0.50	0.46	0.55	49	57541	41	2	38	1	57
ASE_00182	RNaseP_bact_a links to Rfam database...	0.70	0.63	0.77	86	84144	25	1	24	0	50
ASE_00183	RNaseP_bact_a links to Rfam database...	0.72	0.68	0.77	77	61325	32	0	23	9	36
ASE_00184	RNaseP_bact_a links to Rfam database...	0.79	0.76	0.81	78	54519	20	3	15	2	24
ASE_00185	RNaseP_bact_a links to Rfam database...	0.72	0.64	0.82	82	73436	21	1	17	3	46
ASE_00186	RNaseP_bact_a links to Rfam database...	0.73	0.65	0.81	86	78897	28	2	18	8	46
ASE_00187	RNaseP_arch links to Rfam database...	0.44	0.37	0.53	42	68556	39	1	36	2	73
ASE_00189	RNaseP_bact_b links to Rfam database...	0.65	0.51	0.83	52	63127	14	0	11	3	50
ASE_00190	RNaseP_bact_b links to Rfam database...	0.69	0.52	0.92	47	45400	8	0	4	4	43
ASE_00192	RNaseP_bact_b links to Rfam database...	0.65	0.58	0.73	77	84560	35	3	26	6	56
ASE_00194	RNaseP_bact_b links to Rfam database...	0.51	0.43	0.61	51	73453	36	1	31	4	68
ASE_00195	-	0.63	0.56	0.71	75	86215	33	2	28	3	58
ASE_00196	RNaseP_arch links to Rfam database...	0.76	0.76	0.76	57	31551	21	2	16	3	18
ASE_00197	RNaseP_bact_a links to Rfam database...	0.65	0.58	0.73	84	89138	37	2	29	6	61
ASE_00198	RNaseP_bact_a links to Rfam database...	0.70	0.63	0.77	64	52567	20	4	15	1	38
ASE_00203	RNaseP_bact_a links to Rfam database...	0.77	0.71	0.83	68	46583	18	4	10	4	28
ASE_00204	RNaseP_bact_b links to Rfam database...	0.59	0.52	0.67	58	67809	33	3	26	4	54
ASE_00205	RNaseP_arch links to Rfam database...	0.48	0.46	0.50	41	45974	44	7	34	3	49
ASE_00209	RNaseP_arch links to Rfam database...	0.58	0.50	0.67	44	43005	22	2	20	0	44
ASE_00210	RNaseP_arch links to Rfam database...	0.65	0.65	0.65	42	27196	23	7	16	0	23
ASE_00212	RNaseP_bact_a links to Rfam database...	0.71	0.63	0.79	93	93844	29	2	22	5	55
ASE_00213	RNaseP_arch links to Rfam database...	0.69	0.62	0.76	41	27207	13	4	9	0	25
ASE_00214	RNaseP_bact_a links to Rfam database...	0.80	0.76	0.84	78	56187	20	3	12	5	25
ASE_00215	RNaseP_bact_a links to Rfam database...	0.56	0.49	0.63	49	48438	30	2	27	1	50
ASE_00216	RNaseP_bact_a links to Rfam database...	0.59	0.57	0.62	47	39264	29	7	22	0	35
ASE_00217	RNaseP_bact_a links to Rfam database...	0.45	0.38	0.55	34	40408	29	2	26	1	56
ASE_00221	RNaseP_bact_a links to Rfam database...	0.70	0.57	0.86	67	64542	14	0	11	3	50
ASE_00222	RNaseP_arch links to Rfam database...	0.74	0.70	0.79	110	111961	31	5	25	1	47
ASE_00227	RNaseP_bact_a links to Rfam database...	0.32	0.28	0.36	37	78900	66	6	60	0	96
ASE_00228	RNaseP_bact_a links to Rfam database...	0.72	0.65	0.80	56	46901	16	7	7	2	30
ASE_00229	RNaseP_bact_a links to Rfam database...	0.77	0.67	0.89	58	42421	7	1	6	0	29
ASE_00231	RNaseP_bact_a links to Rfam database...	0.80	0.72	0.90	69	47818	9	1	7	1	27
ASE_00232	RNaseP_bact_a links to Rfam database...	0.67	0.64	0.70	54	38426	23	10	13	0	30
ASE_00234	RNaseP_bact_a links to Rfam database...	0.57	0.47	0.69	61	75378	30	1	26	3	68
ASE_00237	RNaseP_nuc links to Rfam database...	0.09	0.09	0.09	5	45698	62	11	39	12	51
ASE_00238	RNaseP_bact_a links to Rfam database...	0.64	0.53	0.77	60	64183	19	0	18	1	54
ASE_00240	RNaseP_bact_a links to Rfam database...	0.42	0.39	0.46	36	46587	43	1	41	1	57
ASE_00241	RNaseP_bact_a links to Rfam database...	0.76	0.63	0.92	55	43896	6	0	5	1	32
ASE_00242	RNaseP_bact_a links to Rfam database...	0.74	0.66	0.82	74	60985	19	4	12	3	38
ASE_00246	RNaseP_nuc links to Rfam database...	0.39	0.37	0.42	25	48145	45	8	27	10	42
ASE_00247	RNaseP_nuc links to Rfam database...	0.19	0.19	0.20	12	54225	67	14	34	19	52
ASE_00248	RNaseP_bact_a links to Rfam database...	0.67	0.56	0.80	64	62401	17	1	15	1	50
ASE_00250	RNaseP_bact_a links to Rfam database...	0.69	0.55	0.87	72	78920	14	0	11	3	59
ASE_00252	RNaseP_bact_a links to Rfam database...	0.79	0.69	0.90	116	115311	19	2	11	6	52
ASE_00254	RNaseP_bact_a links to Rfam database...	0.80	0.73	0.87	60	36787	15	4	5	6	22
ASE_00255	RNaseP_bact_a links to Rfam database...	0.66	0.59	0.73	77	74586	29	3	25	1	53
ASE_00257	RNaseP_bact_a links to Rfam database...	0.80	0.73	0.88	71	50959	12	0	10	2	26
ASE_00259	RNaseP_bact_a links to Rfam database...	0.47	0.39	0.58	47	73072	36	5	29	2	74
ASE_00263	RNaseP_bact_a links to Rfam database...	0.56	0.54	0.59	65	70389	46	3	43	0	55
ASE_00264	RNaseP_nuc links to Rfam database...	0.52	0.49	0.56	49	49054	44	3	35	6	51
ASE_00267	RNaseP_bact_a links to Rfam database...	0.59	0.50	0.70	44	45087	23	1	18	4	44
ASE_00270	RNaseP_bact_a links to Rfam database...	0.72	0.67	0.77	86	72278	27	3	23	1	42
ASE_00274	RNaseP_bact_a links to Rfam database...	0.49	0.42	0.57	43	55535	33	3	30	0	60
ASE_00277	RNaseP_bact_a links to Rfam database...	0.60	0.56	0.65	51	48126	28	5	23	0	40
ASE_00279	RNaseP_bact_a links to Rfam database...	0.55	0.50	0.61	50	53219	32	3	29	0	51
ASE_00280	RNaseP_bact_a links to Rfam database...	0.65	0.55	0.77	54	51933	18	2	14	2	44
ASE_00281	RNaseP_bact_a links to Rfam database...	0.72	0.63	0.82	55	44484	18	1	11	6	33
ASE_00282	RNaseP_bact_a links to Rfam database...	0.50	0.46	0.55	58	77710	47	8	39	0	69
ASE_00283	RNaseP_bact_a links to Rfam database...	0.69	0.63	0.76	67	61688	22	4	17	1	40
ASE_00284	RNaseP_bact_a links to Rfam database...	0.65	0.59	0.72	64	58222	27	5	20	2	44
ASE_00285	RNaseP_bact_a links to Rfam database...	0.82	0.75	0.88	92	68902	17	3	9	5	30
ASE_00286	RNaseP_bact_a links to Rfam database...	0.73	0.64	0.83	59	46594	16	1	11	4	33
ASE_00287	RNaseP_bact_a links to Rfam database...	0.68	0.60	0.77	62	54865	20	1	18	1	41
ASE_00288	RNaseP_bact_a links to Rfam database...	0.72	0.55	0.94	51	46002	4	0	3	1	42
ASE_00289	RNaseP_bact_a links to Rfam database...	0.83	0.73	0.94	115	100903	11	1	6	4	42
ASE_00291	-	0.53	0.46	0.61	43	48446	28	3	24	1	51
ASE_00292	RNaseP_bact_a links to Rfam database...	0.60	0.52	0.69	72	81706	34	1	31	2	66
ASE_00294	RNaseP_bact_a links to Rfam database...	0.72	0.65	0.81	111	114344	28	1	25	2	60
ASE_00295	RNaseP_bact_a links to Rfam database...	0.68	0.58	0.81	76	73826	18	1	17	0	55
ASE_00296	RNaseP_bact_a links to Rfam database...	0.58	0.52	0.63	76	91686	45	4	40	1	69
ASE_00297	RNaseP_bact_a links to Rfam database...	0.72	0.67	0.78	66	52890	20	3	16	1	32
ASE_00298	RNaseP_bact_a links to Rfam database...	0.30	0.27	0.33	31	67435	65	7	55	3	82
ASE_00299	RNaseP_bact_a links to Rfam database...	0.54	0.51	0.57	51	49366	40	3	35	2	49
ASE_00313	RNaseP_nuc links to Rfam database...	0.55	0.56	0.54	50	62389	59	9	33	17	39
ASE_00316	RNaseP_nuc links to Rfam database...	0.68	0.63	0.74	62	107796	65	3	19	43	36
ASE_00318	RNaseP_bact_b links to Rfam database...	0.58	0.51	0.67	60	80111	33	9	20	4	58
ASE_00327	RNaseP_nuc links to Rfam database...	0.82	0.80	0.85	71	57207	24	3	10	11	18
ASE_00328	RNaseP_bact_b links to Rfam database...	0.74	0.61	0.89	68	72695	13	1	7	5	44
ASE_00330	RNaseP_nuc links to Rfam database...	0.79	0.78	0.80	70	56192	38	1	17	20	20
ASE_00332	RNaseP_bact_a links to Rfam database...	0.55	0.52	0.59	72	81687	53	2	49	2	66
ASE_00335	RNaseP_bact_b links to Rfam database...	0.63	0.54	0.72	63	75379	29	2	22	5	53
ASE_00337	RNaseP_nuc links to Rfam database...	0.54	0.52	0.55	37	39273	44	5	25	14	34
ASE_00338	RNaseP_nuc links to Rfam database...	0.70	0.63	0.77	62	66349	36	3	16	17	36
ASE_00339	RNaseP_bact_a links to Rfam database...	0.75	0.66	0.84	79	80106	24	0	15	9	40
ASE_00340	RNaseP_bact_a links to Rfam database...	0.47	0.44	0.51	37	45984	39	4	31	4	48
ASE_00342	RNaseP_bact_a links to Rfam database...	0.72	0.64	0.80	74	62388	20	1	18	1	41
ASE_00343	RNaseP_bact_a links to Rfam database...	0.71	0.65	0.78	73	83342	32	1	20	11	40
ASE_00346	RNaseP_arch links to Rfam database...	0.36	0.34	0.38	33	48119	56	3	50	3	64
ASE_00353	RNaseP_bact_a links to Rfam database...	0.79	0.72	0.87	77	57881	14	1	11	2	30
ASE_00359	RNaseP_arch links to Rfam database...	0.50	0.45	0.55	36	42713	32	3	26	3	44
ASE_00360	RNaseP_arch links to Rfam database...	0.33	0.31	0.36	20	29347	37	8	28	1	45
ASE_00361	RNaseP_bact_a links to Rfam database...	0.56	0.50	0.63	63	75366	40	4	33	3	64
ASE_00362	RNaseP_bact_a links to Rfam database...	0.63	0.58	0.68	53	48127	27	1	24	2	38
ASE_00363	RNaseP_bact_a links to Rfam database...	0.75	0.63	0.89	59	51294	13	1	6	6	35
ASE_00364	RNaseP_bact_a links to Rfam database...	0.74	0.65	0.84	68	54204	17	0	13	4	37
ASE_00366	RNaseP_bact_a links to Rfam database...	0.45	0.40	0.51	39	58577	37	5	32	0	59
ASE_00367	RNaseP_bact_a links to Rfam database...	0.49	0.47	0.51	40	42993	43	6	32	5	46
ASE_00369	RNaseP_bact_a links to Rfam database...	0.72	0.63	0.84	67	55865	13	1	12	0	40
ASE_00370	RNaseP_bact_a links to Rfam database...	0.70	0.67	0.74	56	41829	22	2	18	2	28
ASE_00372	RNaseP_bact_a links to Rfam database...	0.69	0.64	0.74	64	51917	28	4	18	6	36
ASE_00374	RNaseP_bact_a links to Rfam database...	0.75	0.72	0.79	63	44770	17	2	15	0	25
ASE_00375	RNaseP_bact_a links to Rfam database...	0.86	0.74	1.00	81	60297	3	0	0	3	29
ASE_00376	RNaseP_bact_a links to Rfam database...	0.67	0.61	0.74	64	56866	25	4	19	2	41
ASE_00377	RNaseP_bact_a links to Rfam database...	0.77	0.70	0.85	75	57542	19	3	10	6	32
ASE_00379	RNaseP_bact_a links to Rfam database...	0.62	0.56	0.68	50	45982	30	3	21	6	39
ASE_00380	RNaseP_bact_a links to Rfam database...	0.66	0.57	0.77	56	54873	21	3	14	4	43
ASE_00382	RNaseP_bact_a links to Rfam database...	0.59	0.54	0.65	45	41836	27	5	19	3	39
ASE_00383	RNaseP_bact_a links to Rfam database...	0.76	0.70	0.84	73	54528	17	1	13	3	32
ASE_00384	RNaseP_bact_a links to Rfam database...	0.78	0.73	0.83	67	48435	18	1	13	4	25
ASE_00385	RNaseP_bact_a links to Rfam database...	0.64	0.57	0.73	46	41842	18	8	9	1	35
ASE_00386	RNaseP_bact_a links to Rfam database...	0.69	0.66	0.73	63	50317	29	1	22	6	33
ASE_00387	RNaseP_bact_a links to Rfam database...	0.70	0.63	0.78	66	55860	20	1	18	1	38
ASE_00388	RNaseP_bact_a links to Rfam database...	0.70	0.61	0.82	54	45687	13	0	12	1	35
ASE_00390	RNaseP_bact_a links to Rfam database...	0.58	0.55	0.60	47	42117	32	7	24	1	38
ASE_00393	RNaseP_bact_a links to Rfam database...	0.73	0.66	0.82	61	47821	19	1	12	6	32
ASE_00394	RNaseP_bact_a links to Rfam database...	0.83	0.80	0.86	74	46885	14	3	9	2	19
ASE_00395	RNaseP_bact_a links to Rfam database...	0.72	0.67	0.78	56	41544	18	1	15	2	28
ASE_00396	RNaseP_bact_a links to Rfam database...	0.58	0.54	0.62	45	41543	29	2	26	1	38
ASE_00397	RNaseP_bact_a links to Rfam database...	0.75	0.70	0.80	73	54524	19	3	15	1	32
ASE_00398	RNaseP_bact_a links to Rfam database...	0.66	0.59	0.73	61	55862	25	1	21	3	43
ASE_00400	RNaseP_bact_a links to Rfam database...	0.68	0.58	0.78	62	57891	18	1	16	1	44
ASE_00401	RNaseP_bact_a links to Rfam database...	0.65	0.60	0.70	76	76920	33	4	28	1	50
ASE_00402	RNaseP_bact_a links to Rfam database...	0.72	0.62	0.84	53	42423	11	1	9	1	32
ASE_00403	RNaseP_bact_a links to Rfam database...	0.47	0.37	0.59	40	55877	31	0	28	3	67
ASE_00404	RNaseP_bact_a links to Rfam database...	0.62	0.52	0.75	44	43012	16	1	14	1	41
ASE_00406	RNaseP_bact_a links to Rfam database...	0.76	0.72	0.79	68	48742	21	5	13	3	26
ASE_00408	-	0.78	0.76	0.81	54	32318	14	2	11	1	17
ASE_00409	-	0.74	0.55	1.00	46	40995	0	0	0	0	37
ASE_00411	RNaseP_bact_a links to Rfam database...	0.55	0.46	0.65	41	49392	24	5	17	2	48
ASE_00412	RNaseP_bact_a links to Rfam database...	0.66	0.56	0.79	59	58236	19	1	15	3	46
ASE_00413	RNaseP_bact_a links to Rfam database...	0.56	0.48	0.66	39	44492	21	4	16	1	42
ASE_00414	RNaseP_bact_a links to Rfam database...	0.49	0.45	0.53	43	46279	45	1	37	7	52
ASE_00415	RNaseP_bact_a links to Rfam database...	0.56	0.49	0.66	50	54870	31	2	24	5	53
ASE_00416	RNaseP_bact_a links to Rfam database...	0.62	0.56	0.68	71	77317	38	4	29	5	56
ASE_00417	RNaseP_arch links to Rfam database...	0.52	0.47	0.57	47	54532	39	1	35	3	53
ASE_00418	RNaseP_arch links to Rfam database...	0.07	0.07	0.08	5	38722	56	1	53	2	70
ASE_00419	RNaseP_bact_a links to Rfam database...	0.80	0.75	0.87	77	54857	13	8	4	1	26
ASE_00422	RNaseP_bact_a links to Rfam database...	0.69	0.66	0.73	62	46886	28	5	18	5	32
ASE_00423	RNaseP_bact_a links to Rfam database...	0.65	0.61	0.71	66	56860	29	5	22	2	43
ASE_00426	RNaseP_bact_a links to Rfam database...	0.60	0.53	0.68	57	60991	28	2	25	1	51
ASE_00428	RNaseP_bact_a links to Rfam database...	0.70	0.62	0.79	77	76539	23	2	18	3	48
ASE_00429	-	0.44	0.39	0.50	26	28151	30	3	23	4	40
ASE_00430	RNaseP_bact_a links to Rfam database...	0.72	0.67	0.76	65	46886	27	4	16	7	32
ASE_00431	RNaseP_bact_a links to Rfam database...	0.57	0.46	0.70	44	46297	30	0	19	11	51
ASE_00434	RNaseP_bact_b links to Rfam database...	0.68	0.59	0.79	65	68183	25	2	15	8	45
ASE_00437	RNaseP_bact_a links to Rfam database...	0.50	0.40	0.64	54	79316	32	1	30	1	81
ASE_00438	RNaseP_bact_a links to Rfam database...	0.62	0.53	0.71	62	65979	25	1	24	0	54
ASE_00441	RNaseP_bact_a links to Rfam database...	0.84	0.74	0.94	83	64173	9	0	5	4	29
ASE_00447	RNaseP_bact_a links to Rfam database...	0.74	0.68	0.81	79	60280	24	0	19	5	37
ASE_00448	RNaseP_bact_a links to Rfam database...	0.46	0.37	0.57	41	64189	36	6	25	5	71
ASE_00451	RNaseP_bact_a links to Rfam database...	0.75	0.69	0.82	86	70771	20	1	18	1	39
CRW_00002	-	0.61	0.42	0.87	112	408931	51	0	17	34	152
CRW_00004	-	0.61	0.60	0.62	78	154165	77	6	41	30	53
CRW_00005	-	0.64	0.64	0.65	84	137945	71	8	38	25	48
CRW_00007	-	0.45	0.46	0.45	61	144856	80	22	52	6	72
CRW_00009	-	0.50	0.49	0.51	67	137943	80	5	60	15	71
CRW_00010	-	0.86	0.83	0.89	105	102713	19	3	10	6	21
CRW_00011	-	0.84	0.85	0.84	117	118201	40	2	21	17	21
CRW_00012	-	0.54	0.46	0.64	65	147052	44	8	28	8	76
CRW_00013	Intron_gpI links to Rfam database...	0.45	0.32	0.63	37	103681	42	7	15	20	78
CRW_00014	-	0.34	0.32	0.38	39	103636	75	9	56	10	84
CRW_00016	Intron_gpI links to Rfam database...	0.74	0.66	0.84	79	77327	27	0	15	12	41
CRW_00017	-	0.64	0.58	0.70	53	92159	37	4	19	14	38
CRW_00018	-	0.59	0.52	0.68	63	182617	71	5	25	41	58
CRW_00019	-	0.80	0.75	0.84	103	127643	37	1	18	18	34
CRW_00024	SSU_rRNA_archaea links to Rfam database...	0.79	0.76	0.83	347	1085183	108	8	63	37	111
CRW_00034	SSU_rRNA_bacteria links to Rfam database...	0.68	0.66	0.71	312	1141875	159	19	110	30	162
CRW_00048	SSU_rRNA_bacteria links to Rfam database...	0.60	0.49	0.75	230	1170907	91	8	70	13	240
CRW_00054	SSU_rRNA_bacteria links to Rfam database...	0.56	0.49	0.64	223	1107466	140	16	111	13	233
CRW_00059	SSU_rRNA_bacteria links to Rfam database...	0.60	0.51	0.71	241	1172408	111	9	88	14	232
CRW_00061	SSU_rRNA_bacteria links to Rfam database...	0.64	0.57	0.72	269	1181581	110	23	80	7	207
CRW_00068	SSU_rRNA_bacteria links to Rfam database...	0.55	0.49	0.63	225	1108945	147	19	116	12	232
CRW_00096	SSU_rRNA_bacteria links to Rfam database...	0.56	0.49	0.63	228	1178519	155	15	118	22	237
CRW_00140	SSU_rRNA_bacteria links to Rfam database...	0.59	0.49	0.70	226	1135957	106	11	84	11	237
CRW_00141	SSU_rRNA_bacteria links to Rfam database...	0.63	0.56	0.70	268	1201642	136	16	99	21	208
CRW_00150	SSU_rRNA_bacteria links to Rfam database...	0.55	0.47	0.66	217	1152591	126	17	96	13	249
CRW_00152	SSU_rRNA_bacteria links to Rfam database...	0.51	0.42	0.62	200	1180095	129	14	107	8	271
CRW_00166	SSU_rRNA_bacteria links to Rfam database...	0.61	0.53	0.70	247	1190845	120	6	98	16	221
CRW_00173	SSU_rRNA_bacteria links to Rfam database...	0.35	0.31	0.39	139	1082299	226	23	195	8	306
CRW_00177	SSU_rRNA_bacteria links to Rfam database...	0.52	0.45	0.59	213	1178522	162	17	128	17	260
CRW_00196	SSU_rRNA_bacteria links to Rfam database...	0.59	0.52	0.67	247	1207869	131	18	101	12	228
CRW_00230	SSU_rRNA_bacteria links to Rfam database...	0.59	0.52	0.67	250	1198552	140	19	105	16	228
CRW_00245	SSU_rRNA_bacteria links to Rfam database...	0.56	0.49	0.65	221	1105989	128	13	105	10	232
CRW_00248	SSU_rRNA_bacteria links to Rfam database...	0.66	0.61	0.71	296	1218724	154	20	101	33	188
CRW_00250	SSU_rRNA_bacteria links to Rfam database...	0.57	0.50	0.66	237	1198568	130	20	101	9	241
CRW_00256	SSU_rRNA_bacteria links to Rfam database...	0.45	0.35	0.57	165	1192449	145	20	106	19	303
CRW_00270	SSU_rRNA_bacteria links to Rfam database...	0.67	0.57	0.79	260	1111955	83	11	60	12	195
CRW_00271	SSU_rRNA_bacteria links to Rfam database...	0.48	0.41	0.55	190	1122405	171	26	130	15	272
CRW_00273	SSU_rRNA_bacteria links to Rfam database...	0.51	0.43	0.60	194	1085280	142	14	113	15	252
CRW_00275	SSU_rRNA_bacteria links to Rfam database...	0.62	0.54	0.70	249	1114913	130	13	96	21	208
CRW_00277	SSU_rRNA_bacteria links to Rfam database...	0.48	0.36	0.64	165	1110536	105	15	79	11	288
CRW_00278	SSU_rRNA_bacteria links to Rfam database...	0.49	0.41	0.57	186	1129931	157	13	126	18	264
CRW_00279	SSU_rRNA_bacteria links to Rfam database...	0.54	0.45	0.64	209	1180088	132	19	100	13	255
CRW_00280	SSU_rRNA_bacteria links to Rfam database...	0.53	0.42	0.67	192	1117973	105	9	86	10	261
CRW_00281	SSU_rRNA_bacteria links to Rfam database...	0.62	0.57	0.68	265	1144950	146	18	108	20	199
CRW_00283	SSU_rRNA_bacteria links to Rfam database...	0.40	0.32	0.51	138	1015753	153	22	112	19	294
CRW_00284	SSU_rRNA_bacteria links to Rfam database...	0.48	0.36	0.65	162	1131511	101	11	76	14	294
CRW_00285	SSU_rRNA_bacteria links to Rfam database...	0.67	0.59	0.76	268	1117909	98	16	67	15	190
CRW_00289	SSU_rRNA_bacteria links to Rfam database...	0.61	0.55	0.68	260	1189270	143	18	105	20	216
CRW_00292	SSU_rRNA_bacteria links to Rfam database...	0.35	0.31	0.41	141	1123903	217	34	172	11	320
CRW_00338	-	0.19	0.19	0.19	74	1053028	329	76	248	5	321
CRW_00381	-	0.44	0.37	0.53	204	2303343	267	31	153	83	353
CRW_00417	-	0.43	0.33	0.55	86	458248	77	14	55	8	176
CRW_00418	-	0.26	0.19	0.36	49	441193	89	7	81	1	211
CRW_00419	-	0.36	0.27	0.47	71	464016	84	5	74	5	194
CRW_00421	-	0.51	0.42	0.63	111	463028	80	7	57	16	155
CRW_00422	-	0.41	0.33	0.52	87	455367	99	11	70	18	176
CRW_00423	-	0.24	0.18	0.31	34	242448	78	7	67	4	155
CRW_00424	-	0.48	0.40	0.58	145	789146	122	5	100	17	218
CRW_00426	-	0.43	0.35	0.53	94	457268	91	7	77	7	171
CRW_00427	-	0.28	0.23	0.33	61	454396	136	25	99	12	200
CRW_00428	-	0.43	0.33	0.55	87	465937	79	14	57	8	173
CRW_00429	-	0.27	0.19	0.38	44	306819	75	14	59	2	189
CRW_00430	-	0.36	0.26	0.50	70	456351	73	13	56	4	196
CRW_00433	-	0.31	0.21	0.44	56	467902	74	4	66	4	207
CRW_00434	-	0.50	0.37	0.67	97	457301	54	8	40	6	166
CRW_00435	-	0.32	0.22	0.46	59	451596	77	8	62	7	206
CRW_00437	-	0.26	0.20	0.33	53	456331	112	13	93	6	207
CRW_00438	-	0.32	0.25	0.41	68	454416	105	12	85	8	200
CRW_00441	-	0.37	0.27	0.53	70	454448	67	6	57	4	192
CRW_00442	-	0.34	0.25	0.45	66	453480	92	8	74	10	195
CRW_00443	-	0.31	0.21	0.45	55	456367	78	4	64	10	205
CRW_00444	-	0.44	0.32	0.61	85	459222	61	10	44	7	178
CRW_00445	-	0.45	0.37	0.55	99	458224	87	12	68	7	166
CRW_00446	-	0.34	0.29	0.41	77	468807	124	14	98	12	188
CRW_00447	-	0.30	0.25	0.35	66	452488	131	16	106	9	194
CRW_00448	-	0.28	0.21	0.38	55	457300	97	18	73	6	206
CRW_00449	-	0.43	0.31	0.59	80	444961	60	11	44	5	180
CRW_00450	-	0.41	0.27	0.62	72	458286	58	4	41	13	190
CRW_00451	-	0.39	0.28	0.53	75	457305	72	6	60	6	189
CRW_00452	-	0.46	0.33	0.65	86	453495	63	5	42	16	176
CRW_00453	-	0.35	0.25	0.47	66	452537	84	5	68	11	195
CRW_00456	-	0.43	0.29	0.64	78	470813	48	5	39	4	187
CRW_00457	-	0.48	0.38	0.59	101	467857	82	10	60	12	163
CRW_00458	-	0.45	0.34	0.61	89	464984	66	3	54	9	175
CRW_00459	-	0.50	0.41	0.61	109	462061	91	8	63	20	154
CRW_00462	-	0.44	0.31	0.60	82	458267	67	4	50	13	179
CRW_00463	-	0.45	0.37	0.54	94	445867	85	17	62	6	160
CRW_00464	-	0.47	0.33	0.68	87	462113	50	4	37	9	177
CRW_00466	SSU_rRNA_bacteria links to Rfam database...	0.71	0.64	0.79	292	1116394	100	14	65	21	166
CRW_00522	-	0.29	0.24	0.36	187	3643127	351	60	276	15	595
CRW_00530	-	0.37	0.31	0.44	84	534904	119	34	73	12	184
CRW_00535	-	0.46	0.39	0.55	128	898236	125	27	79	19	200
CRW_00538	-	0.40	0.30	0.54	90	812009	98	11	65	22	210
CRW_00542	-	0.30	0.28	0.33	88	994488	198	47	132	19	229
CRW_00589	SSU_rRNA_bacteria links to Rfam database...	0.34	0.28	0.42	125	1094162	188	16	157	15	320
CRW_00590	SSU_rRNA_bacteria links to Rfam database...	0.37	0.32	0.43	143	1119420	207	36	157	14	309
CRW_00591	SSU_rRNA_bacteria links to Rfam database...	0.65	0.59	0.72	261	1098541	124	19	82	23	185
CRW_00594	-	0.25	0.24	0.27	93	1028548	271	39	215	17	302
CRW_00596	-	0.28	0.26	0.30	100	1024261	257	35	200	22	286
CRW_00597	-	0.29	0.25	0.33	103	1200164	243	22	186	35	308
CRW_00604	-	0.86	0.84	0.88	68	411701	143	3	6	134	13
CRW_00605	-	0.71	0.63	0.80	44	183866	107	2	9	96	26
CRW_00606	-	0.94	0.90	0.99	83	559069	184	0	1	183	9
CRW_00607	-	0.85	0.75	0.95	58	536069	241	0	3	238	19
CRW_00608	-	0.84	0.72	0.98	57	35720	6	0	1	5	22
CRW_00610	Intron_gpI links to Rfam database...	0.57	0.52	0.63	42	36248	26	7	18	1	39
CRW_00611	-	0.86	0.77	0.97	58	31315	9	0	2	7	17
CRW_00612	-	0.58	0.51	0.67	47	270410	149	0	23	126	46
CRW_00613	Intron_gpI links to Rfam database...	0.78	0.72	0.85	56	34914	17	1	9	7	22
CRW_00614	Intron_gpI links to Rfam database...	0.23	0.23	0.24	13	121716	103	6	36	61	44
CRW_00615	-	0.90	0.83	0.97	68	553808	240	0	2	238	14
CRW_00617	-	0.53	0.48	0.58	31	426373	170	6	16	148	33
CRW_00618	Intron_gpI links to Rfam database...	0.23	0.21	0.24	13	56226	58	6	35	17	48
CRW_00619	Intron_gpI links to Rfam database...	0.51	0.40	0.64	29	164980	90	3	13	74	44
CRW_00620	Intron_gpI links to Rfam database...	0.21	0.22	0.21	14	150907	85	15	39	31	49
CRW_00621	Intron_gpI links to Rfam database...	0.38	0.34	0.43	24	153125	120	5	27	88	47
CRW_00623	Intron_gpI links to Rfam database...	0.27	0.18	0.41	15	129758	64	3	19	42	68
CRW_00626	-	0.77	0.74	0.81	77	100930	45	1	17	27	27
CRW_00629	-	0.59	0.56	0.64	68	91271	42	8	31	3	54
CRW_00632	-	0.73	0.71	0.75	91	82907	35	2	28	5	37
CRW_00633	Intron_gpI links to Rfam database...	0.65	0.56	0.77	59	63469	20	2	16	2	47
CRW_00634	Intron_gpI links to Rfam database...	0.53	0.47	0.59	44	64546	31	11	19	1	50
CRW_00635	-	0.49	0.45	0.54	61	109166	61	10	41	10	76
CRW_00636	-	0.58	0.55	0.61	78	114832	54	7	43	4	65
CRW_00637	-	0.41	0.36	0.46	57	133779	71	6	61	4	101
CRW_00639	-	0.42	0.38	0.45	53	126639	68	14	50	4	85
CRW_00641	-	0.88	0.86	0.92	65	39832	7	1	5	1	11
CRW_00642	-	0.56	0.58	0.54	38	47207	40	8	25	7	27
CRW_00643	-	0.42	0.42	0.42	51	123135	74	18	52	4	71
CRW_00645	-	0.60	0.60	0.60	40	35444	33	5	22	6	27
CRW_00646	-	0.54	0.53	0.56	34	34919	31	5	22	4	30
CRW_00648	-	0.66	0.60	0.74	89	137954	41	7	25	9	59
CRW_00649	-	0.76	0.74	0.77	92	204361	97	6	21	70	32
CRW_00650	-	0.53	0.49	0.57	70	112927	57	4	49	4	72
CRW_00651	-	0.51	0.51	0.52	62	100008	61	13	45	3	59
CRW_00652	-	0.61	0.63	0.60	82	132218	68	10	45	13	48
CRW_00653	-	0.92	0.90	0.94	120	94702	12	1	7	4	14
CRW_00654	-	0.85	0.80	0.91	99	78101	13	2	8	3	25
CRW_00655	-	0.89	0.82	0.95	102	89146	10	1	4	5	22
CRW_00656	-	0.68	0.59	0.78	76	90427	27	7	15	5	53
CRW_00657	-	0.80	0.77	0.83	105	105903	31	4	18	9	31
CRW_00658	-	0.46	0.45	0.47	46	74594	58	18	33	7	56
CRW_00659	-	0.42	0.44	0.40	27	32318	47	11	29	7	34
CRW_00660	-	0.50	0.47	0.53	28	22102	26	3	22	1	32
CRW_00661	-	0.11	0.10	0.12	5	24268	39	17	20	2	46
CRW_00662	-	0.38	0.35	0.40	23	28623	41	4	30	7	42
CRW_00663	-	0.11	0.10	0.13	6	26060	41	1	39	1	55
CRW_00664	-	0.22	0.22	0.23	17	53554	64	9	48	7	61
CRW_00665	-	0.21	0.19	0.23	9	23614	30	7	23	0	39
CRW_00666	-	0.62	0.58	0.67	73	96032	39	7	29	3	53
CRW_00668	-	0.69	0.66	0.71	99	163739	57	7	33	17	51
CRW_00669	-	0.73	0.58	0.91	69	97385	20	0	7	13	50
CRW_00670	Intron_gpI links to Rfam database...	0.77	0.63	0.93	76	70043	6	0	6	0	44
CRW_00671	Intron_gpI links to Rfam database...	0.71	0.64	0.78	75	62739	23	1	20	2	42
CRW_00672	Intron_gpI links to Rfam database...	0.58	0.49	0.70	54	72313	26	7	16	3	57
CRW_00673	-	0.79	0.75	0.83	79	100033	27	13	3	11	26
CRW_00674	Intron_gpI links to Rfam database...	0.71	0.63	0.80	78	83339	24	5	14	5	46
CRW_00676	Intron_gpI links to Rfam database...	0.47	0.46	0.48	53	93418	61	14	43	4	62
CRW_00677	-	0.57	0.49	0.66	51	71933	32	6	20	6	54
CRW_00678	-	0.46	0.44	0.48	53	666324	233	11	47	175	68
CRW_00679	-	0.41	0.39	0.43	42	76538	62	14	42	6	65
CRW_00680	-	0.55	0.54	0.56	66	516518	178	13	39	126	56
CRW_00681	-	0.54	0.53	0.55	59	112942	67	17	32	18	53
CRW_00683	-	0.63	0.59	0.67	79	460202	174	2	37	135	56
CRW_00684	-	0.53	0.50	0.56	68	612050	219	16	37	166	67
CRW_00685	-	0.31	0.34	0.28	36	156953	107	32	59	16	70
CRW_00686	-	0.67	0.59	0.76	74	95168	30	4	20	6	51
CRW_00687	-	0.64	0.62	0.65	41	28617	23	7	15	1	25
CRW_00688	-	0.85	0.82	0.89	47	21892	7	2	4	1	10
CRW_00689	-	0.69	0.69	0.70	53	33594	27	6	17	4	24
CRW_00690	-	0.77	0.71	0.84	49	33353	16	2	7	7	20
CRW_00691	-	0.67	0.61	0.73	41	27205	20	1	14	5	26
CRW_00692	Intron_gpI links to Rfam database...	0.49	0.44	0.53	40	68560	36	15	20	1	50
CRW_00693	-	0.70	0.68	0.72	83	89137	46	2	31	13	39
CRW_00694	-	0.66	0.65	0.68	79	85788	43	4	34	5	43
CRW_00699	-	0.76	0.71	0.82	90	91696	23	0	20	3	36
CRW_00700	-	0.77	0.73	0.81	107	180769	49	1	24	24	40
CRW_00702	-	0.76	0.73	0.80	55	357366	141	5	9	127	20
CRW_00703	-	0.51	0.48	0.53	32	40410	34	5	23	6	34
CRW_00704	-	0.89	0.87	0.91	82	386670	176	3	5	168	12
CRW_00706	-	0.69	0.71	0.68	42	695548	245	8	12	225	17
CRW_00710	-	0.62	0.50	0.78	57	1040330	209	2	14	193	57
CRW_00712	-	0.47	0.48	0.46	52	952776	318	19	43	256	56
CRW_00713	-	0.82	0.72	0.94	73	731367	238	1	4	233	28
CRW_00714	-	0.76	0.65	0.89	70	186276	43	3	6	34	37
CRW_00715	-	0.83	0.71	0.97	74	69302	5	0	2	3	30
CRW_00716	-	0.81	0.73	0.89	65	193680	73	2	6	65	24
CRW_00717	-	0.42	0.30	0.59	44	153661	39	9	21	9	104
CRW_00718	-	0.70	0.55	0.89	105	189918	29	0	13	16	86
CRW_00719	-	0.69	0.62	0.78	56	230109	91	4	12	75	35
CRW_00720	-	0.53	0.47	0.61	43	208264	77	4	24	49	48
CRW_00721	-	0.65	0.57	0.74	39	58600	24	5	9	10	29
CRW_00763	SSU_rRNA_bacteria links to Rfam database...	0.39	0.29	0.53	130	1215775	153	18	97	38	316
CRW_00764	-	0.11	0.08	0.16	15	253022	84	21	58	5	181
CRW_00765	-	0.41	0.33	0.51	85	452509	86	16	66	4	172
CRW_00766	-	0.27	0.20	0.39	47	440269	88	14	61	13	193
CRW_00768	-	0.63	0.49	0.81	128	471747	57	6	25	26	131
CRW_00769	-	0.50	0.39	0.64	99	451570	74	13	43	18	153
CRW_00772	SSU_rRNA_bacteria links to Rfam database...	0.38	0.30	0.50	120	945758	137	16	106	15	284
CRW_00773	-	0.50	0.42	0.60	108	451545	87	15	57	15	151
CRW_00774	-	0.50	0.39	0.63	103	488403	77	3	57	17	160
CRW_00775	-	0.18	0.11	0.30	24	314741	59	14	42	3	188
CRW_00777	-	0.35	0.27	0.44	83	719210	137	18	89	30	221
CRW_00778	SSU_rRNA_bacteria links to Rfam database...	0.54	0.38	0.77	146	1201835	66	6	38	22	238
CRW_00779	-	0.39	0.33	0.46	139	1031464	177	19	144	14	283
CRW_00780	-	0.34	0.28	0.42	71	475629	114	18	82	14	184
CRW_00783	-	0.40	0.29	0.55	75	453491	73	7	55	11	184
CRW_00784	-	0.42	0.33	0.54	87	456330	83	15	58	10	175
CRW_00785	-	0.52	0.39	0.70	99	452535	48	8	34	6	154
CRW_00787	-	0.50	0.40	0.63	123	646759	83	6	65	12	183
CRW_00789	SSU_rRNA_bacteria links to Rfam database...	0.51	0.40	0.65	179	1137510	120	5	92	23	268
CRW_00793	-	0.53	0.44	0.66	164	1048826	147	21	65	61	213
CRW_00794	-	0.36	0.29	0.44	72	434613	106	13	80	13	174
CRW_00795	SSU_rRNA_bacteria links to Rfam database...	0.35	0.28	0.44	110	1152672	173	15	124	34	284
CRW_00796	-	0.36	0.23	0.57	55	384906	60	0	42	18	180
CRW_00797	-	0.35	0.27	0.44	94	693037	141	20	102	19	248
CRW_00800	SSU_rRNA_eukarya links to Rfam database...	0.58	0.49	0.69	230	1401641	149	10	94	45	240
CRW_00801	-	0.45	0.38	0.53	94	438339	92	22	61	9	155
CRW_00802	-	0.37	0.30	0.46	76	460153	109	16	75	18	177
CRW_00807	-	0.50	0.39	0.64	157	1391701	161	15	73	73	241
CRW_00808	-	0.35	0.28	0.45	98	1301474	199	30	89	80	258
CRW_00813	-	0.45	0.42	0.48	56	530849	163	27	33	103	77
CRW_00815	-	0.65	0.65	0.66	102	159741	57	12	40	5	56
CRW_00816	-	0.46	0.44	0.48	57	143796	69	9	54	6	72
CRW_00820	-	0.68	0.61	0.77	88	136388	34	3	24	7	57
CRW_00849	SSU_rRNA_bacteria links to Rfam database...	0.59	0.56	0.62	265	1117830	190	14	151	25	205
CRW_00997	SSU_rRNA_bacteria links to Rfam database...	0.63	0.55	0.72	256	1135921	119	15	86	18	208
CRW_01134	-	0.38	0.30	0.48	127	965091	143	26	111	6	300
CRW_01168	-	0.53	0.44	0.63	182	900865	124	17	89	18	229
CRW_01186	-	0.40	0.34	0.47	131	836292	164	14	134	16	255
CRW_01188	-	0.21	0.19	0.23	76	837538	253	40	211	2	317
CRW_01189	-	0.25	0.22	0.28	86	862335	227	38	182	7	306
CRW_01214	-	0.33	0.27	0.41	110	932028	163	16	141	6	295
CRW_01222	-	0.31	0.26	0.38	103	913006	171	35	132	4	294
CRW_01224	-	0.43	0.34	0.55	133	913033	118	11	99	8	264
CRW_01239	-	0.25	0.19	0.32	74	840222	162	22	138	2	308
CRW_01250	-	0.48	0.39	0.59	147	781625	116	11	92	13	231
CRW_01260	-	0.21	0.16	0.27	63	913043	183	23	147	13	330
CRW_01266	-	0.36	0.34	0.38	129	818217	229	37	177	15	252
CRW_01271	-	0.37	0.32	0.42	122	827252	174	25	142	7	259
CRW_01275	-	0.40	0.36	0.45	154	1082311	205	36	155	14	278
CRW_01283	-	0.36	0.28	0.46	114	963716	147	18	118	11	295
CRW_01314	-	0.28	0.22	0.34	91	937500	180	20	154	6	316
CRW_01343	SSU_rRNA_archaea links to Rfam database...	0.46	0.41	0.52	176	977564	173	23	138	12	258
CRW_01344	-	0.27	0.22	0.33	81	791667	168	23	140	5	285
PDB_00005	Tymo_tRNA-like links to Rfam database...	0.88	0.79	1.00	11	935	0	0	0	0	3
PDB_00018	-	0.20	0.20	0.22	4	1017	14	2	12	0	16
PDB_00020	-	0.38	0.35	0.44	7	764	9	0	9	0	13
PDB_00041	-	0.70	0.50	1.00	6	624	0	0	0	0	6
PDB_00053	-	0.73	0.55	1.00	6	429	0	0	0	0	5
PDB_00056	-	0.93	0.88	1.00	14	616	0	0	0	0	2
PDB_00072	-	0.49	0.50	0.49	105	148025	110	9	101	0	105
PDB_00078	-	0.54	0.50	0.57	58	49669	43	5	38	0	57
PDB_00079	-	0.69	0.63	0.76	89	121654	57	9	19	29	53
PDB_00123	-	-0.01	0.00	0.00	0	4151	35	0	35	0	36
PDB_00124	-	-0.02	0.00	0.00	0	488	8	2	6	0	10
PDB_00128	-	0.80	0.71	0.91	10	485	1	0	1	0	4
PDB_00134	-	0.79	0.63	1.00	5	373	0	0	0	0	3
PDB_00138	-	0.79	0.63	1.00	5	373	0	0	0	0	3
PDB_00209	-	0.67	0.45	1.00	5	556	0	0	0	0	6
PDB_00243	-	0.63	0.58	0.70	7	620	3	0	3	0	5
PDB_00278	-	0.23	0.19	0.29	14	24927	35	2	33	0	58
PDB_00352	-	0.92	0.84	1.00	16	1209	0	0	0	0	3
PDB_00370	-	0.00	0.00	0.00	0	15219	6	0	6	0	25
PDB_00403	-	0.63	0.59	0.66	91	124612	59	14	33	12	62
PDB_00409	-	0.36	0.40	0.32	98	688245	284	64	144	76	147
PDB_00423	-	0.15	0.14	0.17	10	26738	48	4	44	0	64
PDB_00447	-	0.59	0.41	0.86	18	7119	3	3	0	0	26
PDB_00571	tRNA links to Rfam database...	0.77	0.64	0.94	16	3304	1	1	0	0	9
PDB_00701	-	0.17	0.16	0.18	17	45357	77	6	71	0	92
PDB_00703	SSU_rRNA_bacteria links to Rfam database...	0.55	0.49	0.61	244	1073448	180	13	140	27	251
PDB_00713	-	0.54	0.48	0.63	10	2000	6	1	5	0	11
PDB_00716	HDV_ribozyme links to Rfam database...	0.33	0.30	0.37	7	2682	13	0	12	1	16
PDB_00747	-	0.79	0.68	0.92	54	24472	6	0	5	1	26
PDB_00804	-	0.22	0.24	0.21	12	15342	46	10	36	0	38
PDB_00805	-	0.68	0.60	0.76	182	467790	85	2	54	29	120
PDB_00827	Intron_gpI links to Rfam database...	0.71	0.54	0.94	44	26981	5	0	3	2	37
PDB_00828	Purine links to Rfam database...	0.88	0.78	1.00	21	2464	0	0	0	0	6
PDB_00829	Purine links to Rfam database...	0.86	0.75	1.00	18	2260	0	0	0	0	6
PDB_00842	-	0.79	0.63	1.00	5	373	0	0	0	0	3
PDB_00851	-	0.44	0.39	0.50	16	4721	16	0	16	0	25
PDB_00857	-	0.77	0.60	1.00	9	1072	0	0	0	0	6
PDB_00874	-	-0.02	0.00	0.00	0	929	17	0	17	0	20
PDB_00886	-	-0.01	0.00	0.00	0	4148	38	0	38	0	40
PDB_00917	-	0.51	0.47	0.54	45	35162	44	2	36	6	50
PDB_00918	-	0.75	0.57	1.00	4	321	0	0	0	0	3
PDB_00919	RNaseP_bact_a links to Rfam database...	0.56	0.50	0.62	52	44169	36	4	28	4	51
PDB_01009	tRNA links to Rfam database...	0.46	0.52	0.41	11	2458	16	5	11	0	10
PDB_01020	Purine links to Rfam database...	0.86	0.74	1.00	17	2261	1	0	0	1	6
PDB_01040	-	0.30	0.30	0.32	6	1109	13	0	13	0	14
PDB_01059	-	0.75	0.57	1.00	4	227	0	0	0	0	3
PDB_01070	-	0.38	0.28	0.52	15	12691	14	0	14	0	39
PDB_01073	SAM links to Rfam database...	0.86	0.74	1.00	25	4346	1	0	0	1	9
PDB_01092	glmS links to Rfam database...	0.71	0.63	0.80	33	10112	10	1	7	2	19
PDB_01105	SSU_rRNA_bacteria links to Rfam database...	0.62	0.57	0.68	307	1433517	177	8	139	30	233
PDB_01120	SSU_rRNA_bacteria links to Rfam database...	0.49	0.42	0.59	220	1204752	177	19	137	21	307
PDB_01129	-	0.52	0.44	0.63	31	35462	22	12	6	4	40
PDB_01157	-	0.45	0.40	0.52	39	50011	36	6	30	0	59
PDB_01166	-	0.57	0.51	0.63	109	181932	71	16	49	6	103
PDB_01194	-	-0.02	0.00	0.00	0	487	9	0	9	0	15
PDB_01201	-	0.85	0.73	1.00	16	1112	0	0	0	0	6
PDB_01203	-	0.72	0.68	0.76	13	1159	4	3	1	0	6
PDB_01250	-	0.18	0.15	0.22	6	12063	21	5	16	0	35
PDB_01260	-	0.64	0.48	0.86	12	1816	2	0	2	0	13
PDB_01261	-	0.77	0.64	0.92	216	467794	23	1	17	5	120
PDB_01273	SSU_rRNA_bacteria links to Rfam database...	0.51	0.47	0.56	229	1117849	211	14	168	29	262
PDB_01281	-	-0.03	0.00	0.00	0	366	12	0	12	0	14
PDB_01299	-	0.74	0.67	0.83	10	891	2	1	1	0	5
PDB_01309	-	-0.01	0.00	0.00	0	9118	62	9	53	0	39
RFA_00597	Telomerase-vert links to Rfam database...	0.60	0.59	0.61	64	97798	56	15	26	15	45
RFA_00598	Telomerase-vert links to Rfam database...	0.48	0.47	0.51	47	84573	71	5	41	25	54
RFA_00599	Telomerase-vert links to Rfam database...	0.73	0.70	0.76	78	101372	49	7	18	24	33
RFA_00600	Telomerase-vert links to Rfam database...	0.68	0.72	0.64	72	120183	71	18	22	31	28
RFA_00601	Telomerase-vert links to Rfam database...	0.34	0.36	0.32	41	99105	97	33	56	8	73
RFA_00602	Telomerase-vert links to Rfam database...	0.67	0.71	0.64	82	101347	54	22	24	8	34
RFA_00632	HDV_ribozyme links to Rfam database...	0.67	0.61	0.74	17	4072	6	1	5	0	11
RFA_00636	HDV_ribozyme links to Rfam database...	0.64	0.64	0.64	18	3977	10	4	6	0	10
RFA_00767	Corona_pk3 links to Rfam database...	0.74	0.56	1.00	10	1881	0	0	0	0	8
RFA_00768	Corona_pk3 links to Rfam database...	0.45	0.44	0.47	8	1874	9	1	8	0	10
RFA_00769	Corona_pk3 links to Rfam database...	0.63	0.56	0.71	10	1939	4	3	1	0	8
RFA_00770	Corona_pk3 links to Rfam database...	0.64	0.50	0.82	9	2005	4	0	2	2	9
RFA_00773	Corona_pk3 links to Rfam database...	0.71	0.56	0.91	10	1942	3	1	0	2	8
RFA_00779	Corona_pk3 links to Rfam database...	0.68	0.56	0.83	10	1941	2	0	2	0	8
RFA_00808	RydC links to Rfam database...	0.75	0.56	1.00	9	2007	0	0	0	0	7
RFA_00809	RydC links to Rfam database...	0.43	0.38	0.50	6	2133	6	0	6	0	10
TMR_00007	tmRNA links to Rfam database...	0.80	0.68	0.94	73	61698	11	1	4	6	35
TMR_00008	tmRNA links to Rfam database...	0.68	0.59	0.79	63	65986	26	7	10	9	43
TMR_00010	tmRNA links to Rfam database...	0.37	0.33	0.42	32	57893	50	5	40	5	64
TMR_00012	tmRNA links to Rfam database...	0.43	0.42	0.44	34	64542	63	15	29	19	47
TMR_00014	tmRNA links to Rfam database...	0.77	0.70	0.84	77	68543	22	4	11	7	33
TMR_00017	tmRNA links to Rfam database...	0.55	0.41	0.74	42	67104	19	0	15	4	60
TMR_00018	tmRNA links to Rfam database...	0.45	0.38	0.52	35	64553	36	10	22	4	57
TMR_00028	tmRNA links to Rfam database...	0.71	0.68	0.73	66	62745	28	4	20	4	31
TMR_00030	tmRNA links to Rfam database...	0.38	0.32	0.45	35	75777	47	7	36	4	76
TMR_00034	tmRNA links to Rfam database...	0.63	0.62	0.65	68	59926	44	7	30	7	42
TMR_00035	tmRNA links to Rfam database...	0.53	0.55	0.52	54	67792	57	10	40	7	44
TMR_00036	tmRNA links to Rfam database...	0.71	0.59	0.85	60	90454	35	2	9	24	41
TMR_00038	tmRNA links to Rfam database...	0.27	0.25	0.28	28	71153	78	14	58	6	82
TMR_00042	tmRNA links to Rfam database...	0.38	0.34	0.42	33	62757	48	6	39	3	65
TMR_00046	tmRNA links to Rfam database...	0.60	0.56	0.64	54	62750	37	4	27	6	42
TMR_00047	tmRNA links to Rfam database...	0.21	0.21	0.22	12	48461	59	11	32	16	45
TMR_00048	tmRNA links to Rfam database...	0.48	0.46	0.49	44	64890	55	8	38	9	51
TMR_00049	tmRNA links to Rfam database...	0.59	0.54	0.64	47	63116	37	4	23	10	40
TMR_00051	tmRNA links to Rfam database...	0.68	0.63	0.75	59	65624	35	2	18	15	35
TMR_00055	tmRNA links to Rfam database...	0.47	0.39	0.56	44	78925	34	10	24	0	70
TMR_00057	tmRNA links to Rfam database...	0.25	0.27	0.23	21	73830	78	15	54	9	58
TMR_00061	tmRNA links to Rfam database...	0.34	0.29	0.40	29	59612	52	8	36	8	70
TMR_00062	tmRNA links to Rfam database...	0.62	0.62	0.63	64	78504	48	7	31	10	40
TMR_00064	tmRNA links to Rfam database...	0.42	0.37	0.48	38	76949	41	10	31	0	65
TMR_00065	tmRNA links to Rfam database...	0.50	0.40	0.64	42	76570	25	10	14	1	64
TMR_00067	tmRNA links to Rfam database...	0.47	0.45	0.50	51	82114	54	7	43	4	63
TMR_00073	tmRNA links to Rfam database...	0.62	0.54	0.71	63	65614	27	5	21	1	54
TMR_00076	tmRNA links to Rfam database...	0.50	0.48	0.53	48	70785	50	12	31	7	52
TMR_00080	tmRNA links to Rfam database...	0.42	0.36	0.49	35	70428	37	7	30	0	61
TMR_00081	tmRNA links to Rfam database...	0.55	0.43	0.71	46	67096	19	4	15	0	60
TMR_00082	tmRNA links to Rfam database...	0.29	0.26	0.32	25	67818	53	9	44	0	71
TMR_00083	tmRNA links to Rfam database...	0.77	0.71	0.83	75	68175	17	4	11	2	30
TMR_00092	tmRNA links to Rfam database...	0.65	0.66	0.64	67	67424	43	11	26	6	34
TMR_00093	tmRNA links to Rfam database...	0.42	0.35	0.49	36	64188	43	12	25	6	66
TMR_00096	tmRNA links to Rfam database...	0.31	0.27	0.36	27	64906	56	10	37	9	73
TMR_00101	tmRNA links to Rfam database...	0.63	0.58	0.68	62	64170	39	8	21	10	45
TMR_00102	tmRNA links to Rfam database...	0.34	0.30	0.39	30	64185	49	11	35	3	71
TMR_00103	tmRNA links to Rfam database...	0.57	0.58	0.57	63	64150	50	15	33	2	45
TMR_00104	-	0.08	0.07	0.09	5	66741	49	11	38	0	65
TMR_00106	tmRNA links to Rfam database...	0.58	0.50	0.67	60	90010	33	10	20	3	60
TMR_00109	tmRNA links to Rfam database...	0.50	0.40	0.61	49	88330	31	8	23	0	73
TMR_00111	tmRNA links to Rfam database...	0.56	0.52	0.61	63	90421	45	12	29	4	59
TMR_00116	tmRNA links to Rfam database...	0.74	0.63	0.86	66	64903	25	1	10	14	38
TMR_00117	tmRNA links to Rfam database...	0.73	0.63	0.84	74	80112	23	6	8	9	44
TMR_00118	tmRNA links to Rfam database...	0.62	0.54	0.71	65	81314	35	4	23	8	55
TMR_00119	tmRNA links to Rfam database...	0.68	0.63	0.73	66	71919	31	4	21	6	38
TMR_00123	tmRNA links to Rfam database...	0.56	0.50	0.63	50	66350	35	3	27	5	51
TMR_00124	tmRNA links to Rfam database...	0.64	0.58	0.71	57	70420	32	10	13	9	41
TMR_00125	tmRNA links to Rfam database...	0.34	0.25	0.47	25	64208	32	7	21	4	74
TMR_00127	tmRNA links to Rfam database...	0.64	0.61	0.68	59	62748	36	1	27	8	38
TMR_00128	tmRNA links to Rfam database...	0.35	0.32	0.37	31	60992	52	14	38	0	65
TMR_00131	tmRNA links to Rfam database...	0.59	0.49	0.71	49	64911	27	5	15	7	50
TMR_00135	tmRNA links to Rfam database...	0.67	0.64	0.71	63	62746	36	6	20	10	36
TMR_00136	tmRNA links to Rfam database...	0.21	0.22	0.21	22	74585	87	20	64	3	79
TMR_00137	tmRNA links to Rfam database...	0.34	0.27	0.43	24	61019	40	3	29	8	65
TMR_00139	tmRNA links to Rfam database...	0.62	0.63	0.61	57	62035	45	18	18	9	34
TMR_00140	tmRNA links to Rfam database...	0.58	0.55	0.62	55	73831	55	3	31	21	45
TMR_00142	tmRNA links to Rfam database...	0.61	0.58	0.64	59	70784	46	8	25	13	43
TMR_00143	tmRNA links to Rfam database...	0.46	0.46	0.47	47	64520	63	10	43	10	56
TMR_00144	tmRNA links to Rfam database...	0.44	0.37	0.52	38	74232	40	4	31	5	65
TMR_00146	tmRNA links to Rfam database...	0.87	0.90	0.84	38	32086	19	5	2	12	4
TMR_00150	tmRNA links to Rfam database...	0.85	0.79	0.92	33	43035	27	0	3	24	9
TMR_00152	tmRNA links to Rfam database...	0.38	0.30	0.47	35	81332	46	7	32	7	80
TMR_00155	tmRNA links to Rfam database...	0.74	0.63	0.86	66	61699	20	3	8	9	38
TMR_00156	tmRNA links to Rfam database...	0.57	0.49	0.66	48	60305	29	5	20	4	49
TMR_00158	tmRNA links to Rfam database...	0.56	0.51	0.63	50	60646	34	3	27	4	49
TMR_00159	tmRNA links to Rfam database...	0.67	0.61	0.74	56	62052	26	6	14	6	36
TMR_00160	tmRNA links to Rfam database...	0.56	0.51	0.62	48	64542	37	8	22	7	47
TMR_00164	tmRNA links to Rfam database...	0.41	0.35	0.49	37	66720	46	7	31	8	69
TMR_00165	tmRNA links to Rfam database...	0.50	0.46	0.55	45	61694	44	9	28	7	52
TMR_00166	tmRNA links to Rfam database...	0.43	0.35	0.54	35	61711	40	3	27	10	66
TMR_00168	tmRNA links to Rfam database...	0.76	0.68	0.84	78	60982	19	0	15	4	36
TMR_00173	tmRNA links to Rfam database...	0.42	0.36	0.50	15	42165	40	5	10	25	27
TMR_00179	tmRNA links to Rfam database...	0.45	0.45	0.45	44	67063	61	6	48	7	54
TMR_00180	tmRNA links to Rfam database...	0.76	0.72	0.80	71	67072	30	4	14	12	28
TMR_00182	tmRNA links to Rfam database...	0.26	0.22	0.31	22	66358	54	8	42	4	80
TMR_00183	tmRNA links to Rfam database...	0.28	0.24	0.32	25	63111	60	7	47	6	78
TMR_00184	tmRNA links to Rfam database...	0.43	0.41	0.44	42	63095	61	4	49	8	60
TMR_00193	tmRNA links to Rfam database...	0.56	0.54	0.58	43	59266	43	6	25	12	37
TMR_00194	tmRNA links to Rfam database...	0.52	0.44	0.62	41	62769	33	1	24	8	52
TMR_00196	tmRNA links to Rfam database...	0.52	0.42	0.63	41	61010	30	7	17	6	56
TMR_00199	tmRNA links to Rfam database...	0.57	0.57	0.57	52	62744	46	16	23	7	40
TMR_00200	-	0.44	0.40	0.49	30	41555	41	7	24	10	45
TMR_00204	tmRNA links to Rfam database...	0.60	0.53	0.68	51	60303	33	9	15	9	46
TMR_00207	tmRNA links to Rfam database...	0.46	0.38	0.55	39	72319	37	4	28	5	64
TMR_00223	tmRNA links to Rfam database...	0.42	0.38	0.47	36	64185	44	10	30	4	59
TMR_00224	tmRNA links to Rfam database...	0.55	0.44	0.70	44	64917	24	2	17	5	57
TMR_00226	tmRNA links to Rfam database...	0.38	0.36	0.41	38	69658	61	13	42	6	67
TMR_00227	tmRNA links to Rfam database...	0.37	0.36	0.38	36	70031	61	8	50	3	65
TMR_00228	tmRNA links to Rfam database...	0.35	0.35	0.36	38	88304	73	20	48	5	70
TMR_00234	tmRNA links to Rfam database...	0.39	0.32	0.47	33	58926	41	4	33	4	69
TMR_00238	tmRNA links to Rfam database...	0.33	0.33	0.33	33	84567	72	19	47	6	68
TMR_00239	tmRNA links to Rfam database...	0.52	0.50	0.55	48	61688	42	9	31	2	48
TMR_00240	tmRNA links to Rfam database...	0.58	0.54	0.62	46	63116	34	13	15	6	39
TMR_00246	-	0.28	0.29	0.27	10	78173	96	2	25	69	24
TMR_00248	tmRNA links to Rfam database...	0.38	0.32	0.46	12	54259	40	3	11	26	26
TMR_00257	tmRNA links to Rfam database...	0.26	0.20	0.33	20	67101	45	1	39	5	78
TMR_00259	tmRNA links to Rfam database...	0.37	0.32	0.44	33	67821	42	8	34	0	70
TMR_00261	tmRNA links to Rfam database...	0.59	0.59	0.59	60	66694	45	13	28	4	41
TMR_00262	tmRNA links to Rfam database...	0.53	0.46	0.62	48	74227	32	10	20	2	56
TMR_00271	tmRNA links to Rfam database...	0.62	0.57	0.68	52	64184	36	6	19	11	39
TMR_00274	tmRNA links to Rfam database...	0.60	0.59	0.62	62	66695	43	13	25	5	43
TMR_00278	tmRNA links to Rfam database...	0.47	0.43	0.51	44	67809	53	3	40	10	58
TMR_00279	tmRNA links to Rfam database...	0.57	0.54	0.60	51	68921	44	6	28	10	43
TMR_00280	tmRNA links to Rfam database...	0.62	0.62	0.61	63	65963	59	3	37	19	38
TMR_00283	tmRNA links to Rfam database...	0.65	0.52	0.81	50	65279	22	1	11	10	46
TMR_00289	tmRNA links to Rfam database...	0.57	0.53	0.62	52	67077	42	5	27	10	46
TMR_00290	tmRNA links to Rfam database...	0.61	0.53	0.70	49	64191	34	0	21	13	43
TMR_00296	tmRNA links to Rfam database...	0.50	0.48	0.52	47	68915	45	9	35	1	51
TMR_00298	tmRNA links to Rfam database...	0.57	0.50	0.65	51	68186	35	10	18	7	50
TMR_00300	tmRNA links to Rfam database...	0.65	0.63	0.67	71	70394	46	9	26	11	41
TMR_00301	tmRNA links to Rfam database...	0.63	0.51	0.79	49	82153	18	3	10	5	47
TMR_00302	tmRNA links to Rfam database...	0.29	0.28	0.30	26	77335	69	14	46	9	68
TMR_00305	tmRNA links to Rfam database...	0.65	0.57	0.73	58	60996	32	5	16	11	44
TMR_00306	tmRNA links to Rfam database...	0.71	0.66	0.76	70	64169	27	2	20	5	36
TMR_00310	tmRNA links to Rfam database...	0.58	0.52	0.64	51	63823	40	9	20	11	47
TMR_00317	tmRNA links to Rfam database...	0.67	0.64	0.71	65	68173	31	4	23	4	37
TMR_00331	tmRNA links to Rfam database...	0.40	0.40	0.40	33	66712	63	6	44	13	49
TMR_00332	tmRNA links to Rfam database...	0.43	0.35	0.53	35	67095	36	1	30	5	64
TMR_00334	tmRNA links to Rfam database...	0.39	0.35	0.44	35	66716	51	9	35	7	66
TMR_00337	tmRNA links to Rfam database...	0.41	0.36	0.48	43	82938	50	10	37	3	76
TMR_00340	tmRNA links to Rfam database...	0.55	0.52	0.58	42	64188	53	5	26	22	39
TMR_00341	tmRNA links to Rfam database...	0.34	0.33	0.36	30	63106	60	14	40	6	62
TMR_00343	tmRNA links to Rfam database...	0.37	0.35	0.39	37	64886	65	6	51	8	68
TMR_00345	tmRNA links to Rfam database...	0.73	0.68	0.77	71	63811	28	5	16	7	33
TMR_00346	tmRNA links to Rfam database...	0.51	0.46	0.57	43	64186	36	12	20	4	51
TMR_00348	tmRNA links to Rfam database...	0.30	0.20	0.44	20	77376	42	7	18	17	79
TMR_00352	tmRNA links to Rfam database...	0.10	0.11	0.10	8	95182	86	28	48	10	67
TMR_00353	tmRNA links to Rfam database...	0.56	0.55	0.56	58	84152	55	18	27	10	47
TMR_00357	tmRNA links to Rfam database...	0.36	0.29	0.45	27	82968	51	10	23	18	65
TMR_00358	tmRNA links to Rfam database...	0.67	0.65	0.69	64	74985	47	14	15	18	35
TMR_00361	-	0.35	0.35	0.35	25	93456	55	17	30	8	47
TMR_00366	tmRNA links to Rfam database...	0.52	0.45	0.59	45	67820	42	11	20	11	55
TMR_00372	tmRNA links to Rfam database...	0.59	0.57	0.62	55	70411	45	6	28	11	41
TMR_00374	tmRNA links to Rfam database...	0.37	0.35	0.39	32	81728	64	7	43	14	60
TMR_00375	tmRNA links to Rfam database...	0.52	0.53	0.52	52	73436	52	12	36	4	46
TMR_00376	tmRNA links to Rfam database...	0.56	0.48	0.64	46	74619	40	4	22	14	49
TMR_00378	tmRNA links to Rfam database...	0.36	0.30	0.44	29	67830	47	8	29	10	68
TMR_00383	tmRNA links to Rfam database...	0.50	0.39	0.65	39	66735	30	3	18	9	61
TMR_00384	tmRNA links to Rfam database...	0.23	0.18	0.31	19	65641	47	1	42	4	89
TMR_00393	tmRNA links to Rfam database...	0.61	0.62	0.60	33	53246	53	6	16	31	20
TMR_00395	tmRNA links to Rfam database...	0.75	0.70	0.81	76	64526	25	4	14	7	33
TMR_00398	tmRNA links to Rfam database...	0.77	0.70	0.84	74	65253	20	5	9	6	32
TMR_00399	tmRNA links to Rfam database...	0.41	0.35	0.47	33	64910	43	11	26	6	61
TMR_00404	tmRNA links to Rfam database...	0.60	0.58	0.62	53	67443	49	6	26	17	39
TMR_00408	tmRNA links to Rfam database...	0.60	0.61	0.59	54	65975	47	12	25	10	34
TMR_00409	tmRNA links to Rfam database...	0.65	0.76	0.56	35	68572	65	10	18	37	11
TMR_00411	tmRNA links to Rfam database...	0.57	0.53	0.62	46	61001	37	7	21	9	41
TMR_00415	tmRNA links to Rfam database...	0.70	0.61	0.79	62	67083	17	3	13	1	39
TMR_00419	tmRNA links to Rfam database...	0.65	0.61	0.70	68	81713	47	9	20	18	43
TMR_00422	tmRNA links to Rfam database...	0.54	0.58	0.51	53	67792	66	16	35	15	39
TMR_00423	tmRNA links to Rfam database...	0.52	0.52	0.51	38	63829	48	12	24	12	35
TMR_00427	tmRNA links to Rfam database...	0.44	0.34	0.56	33	67469	31	8	18	5	64
TMR_00429	tmRNA links to Rfam database...	0.47	0.42	0.52	46	74603	47	14	28	5	63
TMR_00430	tmRNA links to Rfam database...	0.17	0.17	0.17	18	82517	86	23	63	0	91
TMR_00431	tmRNA links to Rfam database...	0.73	0.67	0.79	37	51956	37	4	6	27	18
TMR_00432	tmRNA links to Rfam database...	0.27	0.22	0.32	23	79729	54	8	40	6	81
TMR_00433	tmRNA links to Rfam database...	0.57	0.53	0.61	56	80108	41	7	29	5	50
TMR_00439	tmRNA links to Rfam database...	0.49	0.46	0.53	46	68549	50	10	30	10	55
TMR_00441	tmRNA links to Rfam database...	0.16	0.14	0.17	12	62059	68	14	43	11	71
TMR_00443	tmRNA links to Rfam database...	0.62	0.50	0.76	52	67093	23	6	10	7	52
TMR_00448	tmRNA links to Rfam database...	0.54	0.45	0.66	41	62066	27	5	16	6	51
TMR_00451	tmRNA links to Rfam database...	0.23	0.19	0.27	17	63483	50	12	34	4	72
TMR_00457	tmRNA links to Rfam database...	0.24	0.22	0.26	22	78522	66	4	58	4	80
TMR_00458	tmRNA links to Rfam database...	0.35	0.29	0.42	27	63481	45	8	30	7	66
TMR_00460	tmRNA links to Rfam database...	0.67	0.60	0.74	64	79314	29	4	19	6	42
TMR_00465	tmRNA links to Rfam database...	0.32	0.28	0.37	26	64190	49	14	31	4	68
TMR_00469	tmRNA links to Rfam database...	0.57	0.52	0.63	52	64537	35	10	21	4	48
TMR_00472	tmRNA links to Rfam database...	0.52	0.42	0.63	41	64555	29	6	18	5	56
TMR_00478	tmRNA links to Rfam database...	0.26	0.26	0.25	26	71907	81	19	58	4	73
TMR_00498	tmRNA links to Rfam database...	0.47	0.40	0.55	40	68933	40	12	21	7	59
TMR_00499	tmRNA links to Rfam database...	0.25	0.23	0.26	23	64532	71	6	59	6	76
TMR_00501	tmRNA links to Rfam database...	0.47	0.45	0.49	41	62397	52	7	36	9	51
TMR_00502	tmRNA links to Rfam database...	0.37	0.37	0.38	34	75377	63	16	39	8	59
TMR_00503	tmRNA links to Rfam database...	0.73	0.68	0.80	75	67802	27	3	16	8	36
TMR_00519	tmRNA links to Rfam database...	0.40	0.31	0.54	29	63136	38	5	20	13	66
TMR_00520	tmRNA links to Rfam database...	0.50	0.42	0.60	42	63120	38	4	24	10	57
TMR_00522	tmRNA links to Rfam database...	0.41	0.35	0.47	34	63118	47	8	30	9	63
TMR_00528	tmRNA links to Rfam database...	0.41	0.36	0.46	35	63114	51	12	29	10	62
TMR_00540	tmRNA links to Rfam database...	0.37	0.34	0.40	35	73449	60	7	45	8	69
TMR_00541	tmRNA links to Rfam database...	0.62	0.55	0.69	58	61692	34	4	22	8	47
TMR_00544	tmRNA links to Rfam database...	0.35	0.31	0.39	33	89592	62	10	41	11	75
TMR_00547	tmRNA links to Rfam database...	0.66	0.63	0.70	63	65251	30	0	27	3	37
TMR_00553	tmRNA links to Rfam database...	0.47	0.44	0.50	36	48133	42	6	30	6	45
TMR_00559	tmRNA links to Rfam database...	0.44	0.38	0.52	38	62408	41	8	27	6	63
TMR_00560	tmRNA links to Rfam database...	0.57	0.42	0.77	41	61022	17	1	11	5	57
TMR_00562	tmRNA links to Rfam database...	0.19	0.19	0.19	19	72673	79	16	63	0	83
TMR_00563	tmRNA links to Rfam database...	0.65	0.65	0.65	67	75363	44	15	21	8	36
TMR_00566	tmRNA links to Rfam database...	0.59	0.48	0.73	48	60660	23	1	17	5	52
TMR_00568	tmRNA links to Rfam database...	0.53	0.49	0.56	49	60639	44	4	34	6	50
TMR_00570	tmRNA links to Rfam database...	0.69	0.60	0.79	58	60305	21	1	14	6	39
TMR_00571	tmRNA links to Rfam database...	0.61	0.53	0.70	52	60652	30	6	16	8	47
TMR_00576	tmRNA links to Rfam database...	0.66	0.62	0.71	63	60289	33	5	21	7	39
TMR_00579	tmRNA links to Rfam database...	0.23	0.23	0.23	21	80509	80	15	56	9	69
TMR_00580	tmRNA links to Rfam database...	0.44	0.41	0.47	41	60638	50	10	37	3	59
TMR_00581	tmRNA links to Rfam database...	0.48	0.41	0.56	40	62409	37	3	29	5	58
TMR_00584	tmRNA links to Rfam database...	0.67	0.61	0.75	59	60996	30	1	19	10	38
TMR_00586	tmRNA links to Rfam database...	0.42	0.41	0.43	40	60981	59	10	44	5	57
TMR_00587	tmRNA links to Rfam database...	0.61	0.58	0.65	58	61336	39	6	25	8	42
TMR_00588	tmRNA links to Rfam database...	0.39	0.37	0.41	37	77330	59	19	35	5	64
TMR_00594	tmRNA links to Rfam database...	0.43	0.35	0.54	36	79334	36	4	27	5	68
TMR_00596	tmRNA links to Rfam database...	0.36	0.34	0.39	32	78127	62	13	38	11	63
TMR_00599	tmRNA links to Rfam database...	0.28	0.28	0.27	20	63117	60	22	31	7	52
TMR_00600	tmRNA links to Rfam database...	0.44	0.32	0.62	37	79740	25	1	22	2	78
TMR_00601	tmRNA links to Rfam database...	0.37	0.24	0.59	10	58979	47	0	7	40	32
TMR_00603	tmRNA links to Rfam database...	0.80	0.70	0.91	30	60345	40	1	2	37	13
TMR_00604	tmRNA links to Rfam database...	0.68	0.63	0.74	71	62739	27	2	23	2	41
TMR_00605	tmRNA links to Rfam database...	0.53	0.49	0.58	53	74213	42	9	30	3	55
TMR_00606	tmRNA links to Rfam database...	0.41	0.40	0.43	43	68905	62	6	52	4	64
TMR_00609	tmRNA links to Rfam database...	0.69	0.68	0.71	77	63437	39	8	24	7	36
TMR_00610	tmRNA links to Rfam database...	0.75	0.71	0.80	74	62035	30	9	10	11	30
TMR_00611	tmRNA links to Rfam database...	0.63	0.65	0.62	66	61319	40	13	27	0	36
TMR_00612	tmRNA links to Rfam database...	0.47	0.46	0.47	48	60624	58	6	48	4	56
TMR_00614	tmRNA links to Rfam database...	0.72	0.67	0.78	70	60985	29	3	17	9	34
TMR_00615	tmRNA links to Rfam database...	0.70	0.69	0.72	66	63811	37	9	17	11	30
TMR_00616	tmRNA links to Rfam database...	0.45	0.41	0.49	41	67078	50	9	33	8	58
TMR_00617	tmRNA links to Rfam database...	0.31	0.34	0.29	20	34647	58	13	36	9	38
TMR_00623	tmRNA links to Rfam database...	0.55	0.51	0.59	55	61332	41	2	36	3	53
TMR_00624	tmRNA links to Rfam database...	0.85	0.75	0.96	81	62397	13	1	2	10	27
TMR_00625	tmRNA links to Rfam database...	0.30	0.30	0.31	32	78899	74	15	57	2	74
TMR_00626	tmRNA links to Rfam database...	0.54	0.50	0.60	54	67806	41	7	29	5	55
TMR_00680	tmRNA links to Rfam database...	0.27	0.26	0.28	26	67802	76	12	56	8	73
TMR_00681	tmRNA links to Rfam database...	0.60	0.56	0.66	54	65984	37	3	25	9	43
TMR_00683	tmRNA links to Rfam database...	0.33	0.30	0.36	30	82945	62	12	41	9	70
TMR_00686	tmRNA links to Rfam database...	0.53	0.46	0.61	50	71171	41	9	23	9	58
TMR_00687	tmRNA links to Rfam database...	0.35	0.36	0.35	40	71516	75	11	64	0	71
TMR_00696	tmRNA links to Rfam database...	0.29	0.25	0.34	28	84995	67	9	46	12	86
TMR_00698	tmRNA links to Rfam database...	0.39	0.35	0.45	36	63110	44	10	34	0	68
TMR_00699	tmRNA links to Rfam database...	0.54	0.46	0.63	47	67086	33	3	25	5	55
TMR_00702	tmRNA links to Rfam database...	0.35	0.27	0.46	27	67102	39	5	27	7	73
TMR_00703	tmRNA links to Rfam database...	0.56	0.48	0.64	48	67453	34	5	22	7	51
TMR_00706	tmRNA links to Rfam database...	0.65	0.57	0.75	59	66351	22	3	17	2	44
TMR_00711	tmRNA links to Rfam database...	0.60	0.58	0.62	57	67804	39	14	21	4	41
TMR_00712	tmRNA links to Rfam database...	0.34	0.31	0.36	34	78512	72	16	44	12	75
TMR_00716	tmRNA links to Rfam database...	0.24	0.20	0.29	20	62766	53	8	41	4	80

^top

Performance of PknotsRG - scored lower in this pairwise comparison

1. Total counts & total scores for PknotsRG

Total Base Pair Counts
Total TP	49982
Total TN	172684904
Total FP	78015
Total FP CONTRA	11020
Total FP INCONS	55472
Total FP COMP	11523
Total FN	67006

Total Scores
MCC	0.428
Average MCC ± 95% Confidence Intervals	0.465 ± 0.013
Sensitivity	0.427
Positive Predictive Value	0.429
Nr of predictions	818

^top

2. Individual counts for PknotsRG [ download as .csv ]

RNA Chain	Rfam family	MCC	SENS	PPV	TP	TN	FP	FP CONTRA	FP INCONS	FP COMP	FN
ASE_00001	RNaseP_arch links to Rfam database...	0.63	0.61	0.64	46	34119	33	3	23	7	29
ASE_00002	RNaseP_arch links to Rfam database...	0.50	0.49	0.51	36	35440	40	5	30	5	37
ASE_00004	RNaseP_bact_a links to Rfam database...	0.70	0.71	0.70	69	47796	32	9	21	2	28
ASE_00005	RNaseP_bact_a links to Rfam database...	0.63	0.58	0.68	68	57870	38	0	32	6	49
ASE_00006	RNaseP_bact_a links to Rfam database...	0.57	0.58	0.57	54	47491	44	7	34	3	39
ASE_00007	RNaseP_bact_a links to Rfam database...	0.57	0.55	0.61	60	59586	43	1	38	4	50
ASE_00009	RNaseP_arch links to Rfam database...	0.78	0.75	0.82	50	26045	13	0	11	2	17
ASE_00012	RNaseP_bact_a links to Rfam database...	0.58	0.54	0.61	67	73811	49	2	40	7	56
ASE_00014	RNaseP_arch links to Rfam database...	0.24	0.25	0.24	26	54178	82	8	73	1	80
ASE_00017	RNaseP_nuc links to Rfam database...	0.14	0.16	0.13	10	50964	85	8	58	19	54
ASE_00018	RNaseP_bact_a links to Rfam database...	0.80	0.76	0.84	102	80479	22	3	17	2	32
ASE_00020	RNaseP_bact_a links to Rfam database...	0.53	0.52	0.53	66	73796	58	8	50	0	60
ASE_00021	RNaseP_bact_a links to Rfam database...	0.57	0.54	0.61	86	104056	61	7	47	7	74
ASE_00022	RNaseP_bact_b links to Rfam database...	0.46	0.44	0.48	54	82915	65	6	53	6	70
ASE_00023	RNaseP_bact_a links to Rfam database...	0.64	0.63	0.65	80	84131	47	5	39	3	47
ASE_00025	RNaseP_nuc links to Rfam database...	0.23	0.24	0.22	17	78528	115	12	49	54	54
ASE_00026	RNaseP_bact_a links to Rfam database...	0.53	0.51	0.54	56	59582	55	1	46	8	54
ASE_00028	RNaseP_bact_b links to Rfam database...	0.59	0.56	0.61	71	84550	53	4	41	8	55
ASE_00029	RNaseP_bact_a links to Rfam database...	0.56	0.54	0.59	66	82916	48	4	42	2	56
ASE_00030	RNaseP_bact_a links to Rfam database...	0.65	0.62	0.68	90	85358	45	3	40	2	55
ASE_00031	RNaseP_bact_a links to Rfam database...	0.63	0.60	0.65	76	86619	50	2	39	9	50
ASE_00032	RNaseP_bact_a links to Rfam database...	0.57	0.54	0.60	64	80094	47	6	36	5	54
ASE_00033	RNaseP_bact_a links to Rfam database...	0.52	0.48	0.57	58	64879	45	5	38	2	63
ASE_00035	RNaseP_bact_a links to Rfam database...	0.30	0.28	0.32	33	70398	76	11	58	7	85
ASE_00036	RNaseP_bact_a links to Rfam database...	0.46	0.45	0.48	59	75731	68	8	57	3	73
ASE_00037	RNaseP_bact_a links to Rfam database...	0.24	0.23	0.25	25	59239	79	3	73	3	85
ASE_00038	RNaseP_bact_a links to Rfam database...	0.55	0.54	0.56	55	53529	45	4	40	1	46
ASE_00040	RNaseP_bact_a links to Rfam database...	0.50	0.47	0.52	63	78882	64	5	53	6	70
ASE_00041	RNaseP_bact_a links to Rfam database...	0.52	0.50	0.55	54	57532	48	2	42	4	54
ASE_00042	RNaseP_bact_a links to Rfam database...	0.53	0.50	0.58	72	89975	54	3	50	1	73
ASE_00044	RNaseP_bact_a links to Rfam database...	0.69	0.68	0.70	71	54513	35	3	28	4	34
ASE_00046	RNaseP_bact_a links to Rfam database...	0.63	0.57	0.69	59	50317	27	2	25	0	44
ASE_00047	RNaseP_bact_a links to Rfam database...	0.33	0.31	0.35	40	74190	76	5	70	1	90
ASE_00052	RNaseP_bact_a links to Rfam database...	0.50	0.46	0.55	52	61330	48	2	41	5	60
ASE_00053	RNaseP_bact_a links to Rfam database...	0.59	0.58	0.60	77	79273	54	5	46	3	56
ASE_00056	-	0.33	0.33	0.32	24	30802	53	6	44	3	48
ASE_00057	RNaseP_bact_a links to Rfam database...	0.63	0.60	0.65	81	82090	49	8	36	5	53
ASE_00064	RNaseP_bact_a links to Rfam database...	0.43	0.43	0.44	38	45364	53	5	44	4	51
ASE_00066	RNaseP_bact_a links to Rfam database...	0.67	0.64	0.71	83	72273	35	4	30	1	47
ASE_00068	RNaseP_bact_a links to Rfam database...	0.24	0.24	0.25	20	37596	59	5	54	0	65
ASE_00069	RNaseP_bact_a links to Rfam database...	0.68	0.65	0.71	91	82899	44	5	33	6	49
ASE_00074	RNaseP_bact_a links to Rfam database...	0.58	0.57	0.59	68	67781	47	6	41	0	51
ASE_00075	RNaseP_bact_a links to Rfam database...	0.65	0.59	0.71	96	108676	46	2	37	7	66
ASE_00076	RNaseP_bact_a links to Rfam database...	0.60	0.57	0.63	67	68158	42	2	38	2	51
ASE_00077	RNaseP_bact_a links to Rfam database...	0.25	0.24	0.25	21	45067	67	7	55	5	65
ASE_00078	RNaseP_bact_a links to Rfam database...	0.68	0.67	0.68	56	42989	31	5	21	5	27
ASE_00079	RNaseP_bact_a links to Rfam database...	0.51	0.50	0.53	50	55517	44	5	39	0	50
ASE_00080	RNaseP_bact_a links to Rfam database...	0.46	0.44	0.48	54	71519	61	5	53	3	69
ASE_00081	RNaseP_bact_a links to Rfam database...	0.53	0.53	0.54	51	49676	44	5	38	1	46
ASE_00082	RNaseP_bact_a links to Rfam database...	0.50	0.47	0.54	54	70400	60	1	45	14	62
ASE_00083	RNaseP_bact_a links to Rfam database...	0.79	0.75	0.83	82	62382	26	2	15	9	28
ASE_00084	RNaseP_bact_a links to Rfam database...	0.70	0.69	0.72	68	53534	29	6	20	3	31
ASE_00087	RNaseP_bact_a links to Rfam database...	0.61	0.58	0.65	83	88283	49	5	39	5	61
ASE_00089	-	0.29	0.28	0.30	22	31302	52	1	50	1	57
ASE_00090	RNaseP_bact_a links to Rfam database...	0.59	0.59	0.59	60	55509	47	2	40	5	41
ASE_00092	RNaseP_bact_a links to Rfam database...	0.73	0.70	0.76	79	63442	30	0	25	5	34
ASE_00096	RNaseP_bact_a links to Rfam database...	0.48	0.47	0.50	54	63437	58	4	51	3	61
ASE_00099	RNaseP_bact_a links to Rfam database...	0.51	0.50	0.53	60	64506	56	6	48	2	60
ASE_00100	RNaseP_nuc links to Rfam database...	0.20	0.22	0.19	17	82125	115	16	57	42	59
ASE_00102	RNaseP_bact_a links to Rfam database...	0.42	0.41	0.44	68	117699	89	8	80	1	98
ASE_00104	RNaseP_bact_a links to Rfam database...	0.65	0.63	0.68	75	64151	36	3	32	1	44
ASE_00105	RNaseP_bact_a links to Rfam database...	0.38	0.36	0.40	40	64160	66	9	52	5	71
ASE_00107	RNaseP_bact_a links to Rfam database...	0.47	0.45	0.50	57	73039	57	2	55	0	70
ASE_00108	RNaseP_nuc links to Rfam database...	0.24	0.29	0.20	18	46881	83	21	51	11	45
ASE_00111	RNaseP_nuc links to Rfam database...	0.14	0.18	0.11	10	49998	88	24	54	10	47
ASE_00112	RNaseP_bact_a links to Rfam database...	0.79	0.75	0.84	87	75362	23	5	12	6	29
ASE_00115	RNaseP_bact_a links to Rfam database...	0.48	0.47	0.49	47	54520	56	1	47	8	54
ASE_00116	RNaseP_arch links to Rfam database...	0.19	0.20	0.19	13	31558	58	2	53	3	53
ASE_00118	RNaseP_bact_a links to Rfam database...	0.45	0.44	0.45	45	60627	57	4	50	3	57
ASE_00119	RNaseP_bact_a links to Rfam database...	0.67	0.65	0.69	70	62734	33	1	30	2	38
ASE_00120	RNaseP_arch links to Rfam database...	0.35	0.34	0.36	32	46883	56	9	47	0	62
ASE_00121	RNaseP_arch links to Rfam database...	0.25	0.25	0.26	23	45061	68	9	57	2	69
ASE_00122	RNaseP_bact_a links to Rfam database...	0.28	0.27	0.28	24	43280	61	4	57	0	64
ASE_00123	RNaseP_bact_a links to Rfam database...	0.40	0.39	0.42	33	38424	50	2	44	4	52
ASE_00125	RNaseP_bact_a links to Rfam database...	0.64	0.63	0.65	55	39255	30	4	26	0	33
ASE_00126	RNaseP_bact_a links to Rfam database...	0.79	0.79	0.78	65	40387	21	3	15	3	17
ASE_00128	RNaseP_bact_a links to Rfam database...	0.76	0.73	0.80	73	53210	25	2	16	7	27
ASE_00129	RNaseP_bact_a links to Rfam database...	0.52	0.50	0.53	56	62730	53	5	44	4	55
ASE_00131	RNaseP_bact_a links to Rfam database...	0.64	0.58	0.72	49	39272	29	0	19	10	36
ASE_00132	RNaseP_bact_a links to Rfam database...	0.66	0.63	0.68	60	50315	30	4	24	2	35
ASE_00134	RNaseP_bact_a links to Rfam database...	0.56	0.57	0.55	54	50305	49	4	40	5	41
ASE_00135	RNaseP_bact_a links to Rfam database...	0.47	0.46	0.48	50	63085	59	8	47	4	59
ASE_00136	RNaseP_bact_a links to Rfam database...	0.49	0.47	0.51	43	48121	50	1	40	9	49
ASE_00137	RNaseP_bact_a links to Rfam database...	0.44	0.43	0.45	42	48423	53	5	46	2	56
ASE_00138	RNaseP_bact_a links to Rfam database...	0.53	0.52	0.55	42	40393	35	4	31	0	39
ASE_00139	RNaseP_bact_a links to Rfam database...	0.80	0.73	0.88	76	54199	15	2	8	5	28
ASE_00140	RNaseP_bact_a links to Rfam database...	0.69	0.65	0.74	81	70767	33	3	25	5	44
ASE_00142	RNaseP_bact_a links to Rfam database...	0.74	0.70	0.79	85	67054	26	4	18	4	37
ASE_00145	RNaseP_arch links to Rfam database...	0.43	0.42	0.44	47	70019	64	6	53	5	64
ASE_00146	RNaseP_bact_a links to Rfam database...	0.51	0.46	0.56	57	70775	47	0	44	3	67
ASE_00148	RNaseP_arch links to Rfam database...	0.70	0.67	0.73	103	112433	42	4	35	3	51
ASE_00151	RNaseP_bact_a links to Rfam database...	0.42	0.41	0.43	40	51911	52	12	40	0	58
ASE_00153	RNaseP_nuc links to Rfam database...	0.61	0.62	0.61	45	57556	71	2	27	42	28
ASE_00154	RNaseP_arch links to Rfam database...	0.64	0.63	0.65	67	65238	39	4	32	3	40
ASE_00155	RNaseP_arch links to Rfam database...	0.51	0.50	0.52	71	93391	71	10	56	5	71
ASE_00163	RNaseP_bact_a links to Rfam database...	0.29	0.29	0.30	27	53211	72	7	56	9	66
ASE_00165	RNaseP_bact_a links to Rfam database...	0.57	0.55	0.60	56	52881	39	7	31	1	45
ASE_00168	RNaseP_nuc links to Rfam database...	0.23	0.28	0.19	18	60629	92	25	54	13	46
ASE_00169	RNaseP_bact_a links to Rfam database...	0.50	0.49	0.51	52	57190	53	7	42	4	55
ASE_00170	RNaseP_bact_a links to Rfam database...	0.70	0.68	0.72	63	48741	25	2	22	1	30
ASE_00171	RNaseP_bact_a links to Rfam database...	0.71	0.70	0.73	66	48425	25	5	20	0	28
ASE_00172	RNaseP_bact_a links to Rfam database...	0.68	0.66	0.70	70	58896	35	4	26	5	36
ASE_00174	RNaseP_bact_a links to Rfam database...	0.55	0.51	0.59	56	60980	39	3	36	0	53
ASE_00175	RNaseP_bact_a links to Rfam database...	0.44	0.44	0.45	47	59926	62	6	52	4	60
ASE_00176	RNaseP_bact_a links to Rfam database...	0.59	0.55	0.63	61	59934	39	5	31	3	49
ASE_00179	RNaseP_bact_a links to Rfam database...	0.64	0.65	0.62	55	44164	34	7	27	0	29
ASE_00180	RNaseP_bact_a links to Rfam database...	0.72	0.69	0.75	69	51268	29	2	21	6	31
ASE_00181	RNaseP_bact_a links to Rfam database...	0.54	0.53	0.55	56	57528	50	3	43	4	50
ASE_00182	RNaseP_bact_a links to Rfam database...	0.49	0.47	0.51	64	84129	65	6	56	3	72
ASE_00183	RNaseP_bact_a links to Rfam database...	0.72	0.71	0.73	80	61316	33	2	27	4	33
ASE_00184	RNaseP_bact_a links to Rfam database...	0.63	0.64	0.63	65	54511	39	10	29	0	37
ASE_00185	RNaseP_bact_a links to Rfam database...	0.61	0.59	0.65	75	73420	43	5	36	2	53
ASE_00186	RNaseP_bact_a links to Rfam database...	0.74	0.70	0.78	92	78885	31	3	23	5	40
ASE_00187	RNaseP_arch links to Rfam database...	0.51	0.50	0.52	57	68526	57	7	45	5	58
ASE_00189	RNaseP_bact_b links to Rfam database...	0.57	0.55	0.60	56	63097	42	9	28	5	46
ASE_00190	RNaseP_bact_b links to Rfam database...	0.46	0.44	0.47	40	45366	45	8	37	0	50
ASE_00192	RNaseP_bact_b links to Rfam database...	0.46	0.44	0.48	59	84544	69	10	53	6	74
ASE_00194	RNaseP_bact_b links to Rfam database...	0.46	0.45	0.47	53	73423	64	8	52	4	66
ASE_00195	-	0.59	0.58	0.61	77	86193	55	3	47	5	56
ASE_00196	RNaseP_arch links to Rfam database...	0.70	0.69	0.71	52	31553	24	2	19	3	23
ASE_00197	RNaseP_bact_a links to Rfam database...	0.48	0.46	0.51	66	89124	66	4	59	3	79
ASE_00198	RNaseP_bact_a links to Rfam database...	0.54	0.53	0.55	54	52551	45	6	39	0	48
ASE_00203	RNaseP_bact_a links to Rfam database...	0.70	0.68	0.72	65	46575	29	6	19	4	31
ASE_00204	RNaseP_bact_b links to Rfam database...	0.63	0.60	0.67	67	67796	38	7	26	5	45
ASE_00205	RNaseP_arch links to Rfam database...	0.56	0.56	0.56	50	45967	44	7	32	5	40
ASE_00209	RNaseP_arch links to Rfam database...	0.28	0.27	0.29	24	42989	58	4	54	0	64
ASE_00210	RNaseP_arch links to Rfam database...	0.59	0.60	0.59	39	27195	28	6	21	1	26
ASE_00212	RNaseP_bact_a links to Rfam database...	0.54	0.52	0.55	77	93822	66	5	57	4	71
ASE_00213	RNaseP_arch links to Rfam database...	0.73	0.73	0.73	48	27195	19	6	12	1	18
ASE_00214	RNaseP_bact_a links to Rfam database...	0.78	0.76	0.80	78	56182	28	3	17	8	25
ASE_00215	RNaseP_bact_a links to Rfam database...	0.55	0.53	0.57	52	48425	42	4	35	3	47
ASE_00216	RNaseP_bact_a links to Rfam database...	0.60	0.61	0.60	50	39256	36	8	26	2	32
ASE_00217	RNaseP_bact_a links to Rfam database...	0.30	0.29	0.32	26	40388	60	6	50	4	64
ASE_00221	RNaseP_bact_a links to Rfam database...	0.40	0.38	0.42	45	64514	65	3	58	4	72
ASE_00222	RNaseP_arch links to Rfam database...	0.62	0.60	0.64	94	111954	55	9	44	2	63
ASE_00227	RNaseP_bact_a links to Rfam database...	0.31	0.29	0.33	39	78884	80	5	75	0	94
ASE_00228	RNaseP_bact_a links to Rfam database...	0.59	0.59	0.58	51	46883	37	14	23	0	35
ASE_00229	RNaseP_bact_a links to Rfam database...	0.58	0.57	0.59	50	42401	39	5	30	4	37
ASE_00231	RNaseP_bact_a links to Rfam database...	0.69	0.69	0.70	66	47801	28	5	23	0	30
ASE_00232	RNaseP_bact_a links to Rfam database...	0.56	0.55	0.57	46	38422	38	3	32	3	38
ASE_00234	RNaseP_bact_a links to Rfam database...	0.52	0.49	0.55	63	75351	56	2	50	4	66
ASE_00237	RNaseP_nuc links to Rfam database...	0.00	0.00	0.00	0	45672	99	25	56	18	56
ASE_00238	RNaseP_bact_a links to Rfam database...	0.48	0.47	0.50	54	64152	58	4	51	3	60
ASE_00240	RNaseP_bact_a links to Rfam database...	0.64	0.62	0.66	58	46577	37	2	28	7	35
ASE_00241	RNaseP_bact_a links to Rfam database...	0.56	0.54	0.58	47	43875	43	0	34	9	40
ASE_00242	RNaseP_bact_a links to Rfam database...	0.72	0.68	0.76	76	60975	27	3	21	3	36
ASE_00246	RNaseP_nuc links to Rfam database...	0.16	0.18	0.15	12	48124	82	19	50	13	55
ASE_00247	RNaseP_nuc links to Rfam database...	0.17	0.19	0.16	12	54210	91	16	47	28	52
ASE_00248	RNaseP_bact_a links to Rfam database...	0.46	0.42	0.49	48	62384	49	3	46	0	66
ASE_00250	RNaseP_bact_a links to Rfam database...	0.61	0.59	0.64	77	78883	46	4	39	3	54
ASE_00252	RNaseP_bact_a links to Rfam database...	0.59	0.56	0.62	94	115289	62	5	52	5	74
ASE_00254	RNaseP_bact_a links to Rfam database...	0.61	0.60	0.63	49	36778	33	5	24	4	33
ASE_00255	RNaseP_bact_a links to Rfam database...	0.47	0.45	0.50	59	74572	60	7	53	0	71
ASE_00257	RNaseP_bact_a links to Rfam database...	0.64	0.64	0.65	62	50944	34	0	34	0	35
ASE_00259	RNaseP_bact_a links to Rfam database...	0.35	0.33	0.36	40	73043	71	8	62	1	81
ASE_00263	RNaseP_bact_a links to Rfam database...	0.62	0.62	0.62	74	70380	47	5	41	1	46
ASE_00264	RNaseP_nuc links to Rfam database...	0.84	0.78	0.90	78	49054	24	0	9	15	22
ASE_00267	RNaseP_bact_a links to Rfam database...	0.46	0.44	0.48	39	45069	51	5	37	9	49
ASE_00270	RNaseP_bact_a links to Rfam database...	0.63	0.62	0.64	79	72267	45	8	36	1	49
ASE_00274	RNaseP_bact_a links to Rfam database...	0.48	0.47	0.50	48	55515	48	8	40	0	55
ASE_00277	RNaseP_bact_a links to Rfam database...	0.39	0.40	0.39	36	48113	58	9	47	2	55
ASE_00279	RNaseP_bact_a links to Rfam database...	0.38	0.36	0.41	36	53213	58	1	51	6	65
ASE_00280	RNaseP_bact_a links to Rfam database...	0.37	0.37	0.38	36	51908	62	6	53	3	62
ASE_00281	RNaseP_bact_a links to Rfam database...	0.54	0.51	0.58	45	44473	39	0	33	6	43
ASE_00282	RNaseP_bact_a links to Rfam database...	0.42	0.41	0.42	52	77692	72	6	65	1	75
ASE_00283	RNaseP_bact_a links to Rfam database...	0.74	0.73	0.76	78	61673	27	5	20	2	29
ASE_00284	RNaseP_bact_a links to Rfam database...	0.62	0.60	0.64	65	58210	43	4	32	7	43
ASE_00285	RNaseP_bact_a links to Rfam database...	0.62	0.58	0.66	71	68899	43	2	34	7	51
ASE_00286	RNaseP_bact_a links to Rfam database...	0.43	0.42	0.43	39	46574	61	3	49	9	53
ASE_00287	RNaseP_bact_a links to Rfam database...	0.59	0.55	0.63	57	54855	40	0	34	6	46
ASE_00288	RNaseP_bact_a links to Rfam database...	0.46	0.45	0.48	42	45968	47	3	43	1	51
ASE_00289	RNaseP_bact_a links to Rfam database...	0.66	0.62	0.71	98	100886	44	4	37	3	59
ASE_00291	-	0.37	0.36	0.39	34	48429	54	9	44	1	60
ASE_00292	RNaseP_bact_a links to Rfam database...	0.71	0.66	0.76	91	81690	34	4	25	5	47
ASE_00294	RNaseP_bact_a links to Rfam database...	0.78	0.74	0.83	127	114328	29	3	23	3	44
ASE_00295	RNaseP_bact_a links to Rfam database...	0.53	0.50	0.57	65	73805	53	5	45	3	66
ASE_00296	RNaseP_bact_a links to Rfam database...	0.31	0.30	0.33	43	91677	88	8	78	2	102
ASE_00297	RNaseP_bact_a links to Rfam database...	0.53	0.53	0.54	52	52878	50	3	42	5	46
ASE_00298	RNaseP_bact_a links to Rfam database...	0.19	0.19	0.19	21	67420	90	9	78	3	92
ASE_00299	RNaseP_bact_a links to Rfam database...	0.55	0.55	0.56	55	49357	48	8	35	5	45
ASE_00313	RNaseP_nuc links to Rfam database...	0.72	0.72	0.73	64	62393	46	6	18	22	25
ASE_00316	RNaseP_nuc links to Rfam database...	0.56	0.57	0.54	56	107777	87	13	34	40	42
ASE_00318	RNaseP_bact_b links to Rfam database...	0.64	0.61	0.67	72	80092	40	13	23	4	46
ASE_00327	RNaseP_nuc links to Rfam database...	0.80	0.78	0.82	69	57207	34	4	11	19	20
ASE_00328	RNaseP_bact_b links to Rfam database...	0.41	0.41	0.41	46	72659	73	3	63	7	66
ASE_00330	RNaseP_nuc links to Rfam database...	0.75	0.74	0.75	67	56191	42	3	19	20	23
ASE_00332	RNaseP_bact_a links to Rfam database...	0.54	0.51	0.57	71	81686	59	2	51	6	67
ASE_00335	RNaseP_bact_b links to Rfam database...	0.52	0.52	0.52	60	75350	64	13	43	8	56
ASE_00337	RNaseP_nuc links to Rfam database...	0.36	0.37	0.36	26	39268	58	4	42	12	45
ASE_00338	RNaseP_nuc links to Rfam database...	0.72	0.69	0.74	68	66338	41	7	17	17	30
ASE_00339	RNaseP_bact_a links to Rfam database...	0.53	0.52	0.53	62	80084	65	5	49	11	57
ASE_00340	RNaseP_bact_a links to Rfam database...	0.71	0.72	0.71	61	45970	34	7	18	9	24
ASE_00342	RNaseP_bact_a links to Rfam database...	0.48	0.45	0.50	52	62378	51	1	50	0	63
ASE_00343	RNaseP_bact_a links to Rfam database...	0.60	0.62	0.58	70	83316	60	9	41	10	43
ASE_00346	RNaseP_arch links to Rfam database...	0.30	0.29	0.31	28	48115	64	7	55	2	69
ASE_00353	RNaseP_bact_a links to Rfam database...	0.46	0.47	0.45	50	57860	60	11	49	0	57
ASE_00359	RNaseP_arch links to Rfam database...	0.49	0.49	0.49	39	42698	46	3	38	5	41
ASE_00360	RNaseP_arch links to Rfam database...	0.30	0.31	0.30	20	29337	50	11	35	4	45
ASE_00361	RNaseP_bact_a links to Rfam database...	0.37	0.36	0.38	46	75345	78	9	66	3	81
ASE_00362	RNaseP_bact_a links to Rfam database...	0.62	0.62	0.63	56	48116	36	6	27	3	35
ASE_00363	RNaseP_bact_a links to Rfam database...	0.54	0.55	0.53	52	51262	46	5	41	0	42
ASE_00364	RNaseP_bact_a links to Rfam database...	0.32	0.31	0.33	33	54184	72	7	61	4	72
ASE_00366	RNaseP_bact_a links to Rfam database...	0.52	0.54	0.50	53	58547	55	12	41	2	45
ASE_00367	RNaseP_bact_a links to Rfam database...	0.33	0.35	0.32	30	42976	65	8	57	0	56
ASE_00369	RNaseP_bact_a links to Rfam database...	0.68	0.67	0.69	72	55841	37	2	30	5	35
ASE_00370	RNaseP_bact_a links to Rfam database...	0.65	0.63	0.66	53	41825	27	5	22	0	31
ASE_00372	RNaseP_bact_a links to Rfam database...	0.72	0.71	0.72	71	51905	30	5	22	3	29
ASE_00374	RNaseP_bact_a links to Rfam database...	0.56	0.56	0.57	49	44764	37	8	29	0	39
ASE_00375	RNaseP_bact_a links to Rfam database...	0.57	0.54	0.60	59	60280	42	6	33	3	51
ASE_00376	RNaseP_bact_a links to Rfam database...	0.52	0.50	0.54	53	56855	48	4	41	3	52
ASE_00377	RNaseP_bact_a links to Rfam database...	0.69	0.66	0.72	71	57531	34	3	25	6	36
ASE_00379	RNaseP_bact_a links to Rfam database...	0.44	0.44	0.45	39	45969	55	7	41	7	50
ASE_00380	RNaseP_bact_a links to Rfam database...	0.46	0.44	0.47	44	54853	54	1	48	5	55
ASE_00382	RNaseP_bact_a links to Rfam database...	0.51	0.51	0.52	43	41822	43	6	34	3	41
ASE_00383	RNaseP_bact_a links to Rfam database...	0.44	0.43	0.45	45	54516	59	4	50	5	60
ASE_00384	RNaseP_bact_a links to Rfam database...	0.73	0.71	0.75	65	48429	27	4	18	5	27
ASE_00385	RNaseP_bact_a links to Rfam database...	0.42	0.43	0.41	35	41819	52	6	45	1	46
ASE_00386	RNaseP_bact_a links to Rfam database...	0.53	0.53	0.53	51	50306	51	4	42	5	45
ASE_00387	RNaseP_bact_a links to Rfam database...	0.36	0.37	0.35	38	55837	70	6	64	0	66
ASE_00388	RNaseP_bact_a links to Rfam database...	0.68	0.67	0.69	60	45666	32	1	26	5	29
ASE_00390	RNaseP_bact_a links to Rfam database...	0.50	0.48	0.53	41	42117	44	6	31	7	44
ASE_00393	RNaseP_bact_a links to Rfam database...	0.36	0.34	0.38	32	47810	59	3	50	6	61
ASE_00394	RNaseP_bact_a links to Rfam database...	0.72	0.72	0.73	67	46879	28	3	22	3	26
ASE_00395	RNaseP_bact_a links to Rfam database...	0.51	0.49	0.53	41	41539	45	1	35	9	43
ASE_00396	RNaseP_bact_a links to Rfam database...	0.37	0.36	0.38	30	41536	55	5	45	5	53
ASE_00397	RNaseP_bact_a links to Rfam database...	0.52	0.51	0.52	54	54511	50	7	43	0	51
ASE_00398	RNaseP_bact_a links to Rfam database...	0.64	0.62	0.66	64	55848	36	1	32	3	40
ASE_00400	RNaseP_bact_a links to Rfam database...	0.53	0.52	0.54	55	57868	48	5	42	1	51
ASE_00401	RNaseP_bact_a links to Rfam database...	0.55	0.56	0.54	70	76898	60	13	47	0	56
ASE_00402	RNaseP_bact_a links to Rfam database...	0.60	0.59	0.61	50	42404	35	4	28	3	35
ASE_00403	RNaseP_bact_a links to Rfam database...	0.47	0.44	0.50	47	55851	51	3	44	4	60
ASE_00404	RNaseP_bact_a links to Rfam database...	0.56	0.55	0.56	47	42987	42	0	37	5	38
ASE_00406	RNaseP_bact_a links to Rfam database...	0.69	0.66	0.72	62	48742	33	2	22	9	32
ASE_00408	-	0.51	0.49	0.53	35	32319	35	2	29	4	36
ASE_00409	-	0.45	0.46	0.45	38	40956	47	7	40	0	45
ASE_00411	RNaseP_bact_a links to Rfam database...	0.26	0.27	0.26	24	49362	69	12	57	0	65
ASE_00412	RNaseP_bact_a links to Rfam database...	0.38	0.37	0.39	39	58212	60	13	47	0	66
ASE_00413	RNaseP_bact_a links to Rfam database...	0.46	0.49	0.43	40	44457	54	14	40	0	41
ASE_00414	RNaseP_bact_a links to Rfam database...	0.37	0.36	0.40	34	46274	59	9	43	7	61
ASE_00415	RNaseP_bact_a links to Rfam database...	0.51	0.51	0.51	53	54843	52	7	43	2	50
ASE_00416	RNaseP_bact_a links to Rfam database...	0.71	0.68	0.75	86	77306	36	1	28	7	41
ASE_00417	RNaseP_arch links to Rfam database...	0.36	0.37	0.35	37	54508	73	10	60	3	63
ASE_00418	RNaseP_arch links to Rfam database...	0.21	0.21	0.21	16	38703	67	8	54	5	59
ASE_00419	RNaseP_bact_a links to Rfam database...	0.76	0.73	0.80	75	54852	23	4	15	4	28
ASE_00422	RNaseP_bact_a links to Rfam database...	0.48	0.47	0.49	44	46881	51	5	41	5	50
ASE_00423	RNaseP_bact_a links to Rfam database...	0.49	0.49	0.50	53	56847	56	9	44	3	56
ASE_00426	RNaseP_bact_a links to Rfam database...	0.40	0.39	0.40	42	60971	62	5	57	0	66
ASE_00428	RNaseP_bact_a links to Rfam database...	0.54	0.52	0.57	65	76521	54	5	45	4	60
ASE_00429	-	0.36	0.38	0.35	25	28132	47	10	36	1	41
ASE_00430	RNaseP_bact_a links to Rfam database...	0.63	0.61	0.66	59	46881	36	5	26	5	38
ASE_00431	RNaseP_bact_a links to Rfam database...	0.64	0.59	0.70	56	46280	36	3	21	12	39
ASE_00434	RNaseP_bact_b links to Rfam database...	0.63	0.60	0.66	66	68165	46	9	25	12	44
ASE_00437	RNaseP_bact_a links to Rfam database...	0.42	0.41	0.44	55	79275	71	4	67	0	80
ASE_00438	RNaseP_bact_a links to Rfam database...	0.43	0.42	0.45	49	65957	60	6	54	0	67
ASE_00441	RNaseP_bact_a links to Rfam database...	0.78	0.74	0.83	83	64161	28	1	16	11	29
ASE_00447	RNaseP_bact_a links to Rfam database...	0.49	0.47	0.52	54	60274	55	1	49	5	62
ASE_00448	RNaseP_bact_a links to Rfam database...	0.22	0.22	0.23	25	64151	91	6	79	6	87
ASE_00451	RNaseP_bact_a links to Rfam database...	0.50	0.47	0.52	59	70763	57	3	51	3	66
CRW_00002	-	0.59	0.56	0.62	147	408824	142	7	82	53	117
CRW_00004	-	0.49	0.50	0.48	66	154153	104	12	59	33	65
CRW_00005	-	0.55	0.55	0.54	73	137941	84	11	50	23	59
CRW_00007	-	0.35	0.38	0.33	51	144836	110	30	74	6	82
CRW_00009	-	0.59	0.60	0.58	83	137933	83	9	50	24	55
CRW_00010	-	0.58	0.60	0.57	75	102699	67	13	44	10	51
CRW_00011	-	0.65	0.66	0.63	91	118197	65	7	46	12	47
CRW_00012	-	0.34	0.37	0.32	52	146990	117	28	83	6	89
CRW_00013	Intron_gpI links to Rfam database...	0.16	0.17	0.15	19	103617	114	25	79	10	96
CRW_00014	-	0.38	0.37	0.39	46	103622	84	11	61	12	77
CRW_00016	Intron_gpI links to Rfam database...	0.64	0.62	0.66	74	77309	50	5	33	12	46
CRW_00017	-	0.40	0.44	0.36	40	92123	93	18	54	21	51
CRW_00018	-	0.43	0.48	0.39	58	182561	127	33	58	36	63
CRW_00019	-	0.69	0.69	0.70	94	127631	63	6	34	23	43
CRW_00024	SSU_rRNA_archaea links to Rfam database...	0.77	0.76	0.79	348	1085160	130	18	75	37	110
CRW_00034	SSU_rRNA_bacteria links to Rfam database...	0.63	0.63	0.63	300	1141843	196	31	142	23	174
CRW_00048	SSU_rRNA_bacteria links to Rfam database...	0.45	0.45	0.45	210	1170748	276	27	230	19	260
CRW_00054	SSU_rRNA_bacteria links to Rfam database...	0.53	0.52	0.54	236	1107378	216	34	168	14	220
CRW_00059	SSU_rRNA_bacteria links to Rfam database...	0.50	0.49	0.51	233	1172293	234	28	192	14	240
CRW_00061	SSU_rRNA_bacteria links to Rfam database...	0.43	0.44	0.43	208	1181469	284	32	244	8	268
CRW_00068	SSU_rRNA_bacteria links to Rfam database...	0.33	0.33	0.34	152	1108852	312	37	264	11	305
CRW_00096	SSU_rRNA_bacteria links to Rfam database...	0.55	0.55	0.55	255	1178420	227	21	184	22	210
CRW_00140	SSU_rRNA_bacteria links to Rfam database...	0.64	0.64	0.65	296	1135820	182	22	140	20	167
CRW_00141	SSU_rRNA_bacteria links to Rfam database...	0.51	0.50	0.52	238	1201566	240	29	192	19	238
CRW_00150	SSU_rRNA_bacteria links to Rfam database...	0.41	0.41	0.42	190	1152467	282	34	230	18	276
CRW_00152	SSU_rRNA_bacteria links to Rfam database...	0.51	0.50	0.52	236	1179961	240	37	182	21	235
CRW_00166	SSU_rRNA_bacteria links to Rfam database...	0.53	0.52	0.54	242	1190746	234	25	183	26	226
CRW_00173	SSU_rRNA_bacteria links to Rfam database...	0.29	0.29	0.29	128	1082212	325	37	279	9	317
CRW_00177	SSU_rRNA_bacteria links to Rfam database...	0.42	0.41	0.42	196	1178413	284	31	240	13	277
CRW_00196	SSU_rRNA_bacteria links to Rfam database...	0.47	0.46	0.47	220	1207767	270	26	222	22	255
CRW_00230	SSU_rRNA_bacteria links to Rfam database...	0.55	0.54	0.57	260	1198467	221	30	169	22	218
CRW_00245	SSU_rRNA_bacteria links to Rfam database...	0.35	0.35	0.34	157	1105872	312	45	254	13	296
CRW_00248	SSU_rRNA_bacteria links to Rfam database...	0.57	0.57	0.58	275	1218668	230	24	174	32	209
CRW_00250	SSU_rRNA_bacteria links to Rfam database...	0.43	0.43	0.43	205	1198449	287	30	242	15	273
CRW_00256	SSU_rRNA_bacteria links to Rfam database...	0.45	0.44	0.46	206	1192291	257	41	202	14	262
CRW_00270	SSU_rRNA_bacteria links to Rfam database...	0.38	0.37	0.39	168	1111857	279	39	222	18	287
CRW_00271	SSU_rRNA_bacteria links to Rfam database...	0.49	0.48	0.50	220	1122307	239	36	188	15	242
CRW_00273	SSU_rRNA_bacteria links to Rfam database...	0.51	0.50	0.51	222	1085169	227	31	179	17	224
CRW_00275	SSU_rRNA_bacteria links to Rfam database...	0.42	0.42	0.43	193	1114817	278	26	235	17	264
CRW_00277	SSU_rRNA_bacteria links to Rfam database...	0.25	0.25	0.24	113	1110332	354	55	295	4	340
CRW_00278	SSU_rRNA_bacteria links to Rfam database...	0.41	0.40	0.42	180	1129825	270	35	216	19	270
CRW_00279	SSU_rRNA_bacteria links to Rfam database...	0.29	0.29	0.30	134	1179968	334	40	274	20	330
CRW_00280	SSU_rRNA_bacteria links to Rfam database...	0.50	0.50	0.51	226	1117813	234	28	193	13	227
CRW_00281	SSU_rRNA_bacteria links to Rfam database...	0.30	0.30	0.30	138	1144878	340	40	285	15	326
CRW_00283	SSU_rRNA_bacteria links to Rfam database...	0.28	0.28	0.29	120	1015605	317	42	258	17	312
CRW_00284	SSU_rRNA_bacteria links to Rfam database...	0.26	0.25	0.26	115	1131320	336	35	290	11	341
CRW_00285	SSU_rRNA_bacteria links to Rfam database...	0.47	0.47	0.47	214	1117807	257	31	208	18	244
CRW_00289	SSU_rRNA_bacteria links to Rfam database...	0.45	0.44	0.46	209	1189197	272	34	213	25	267
CRW_00292	SSU_rRNA_bacteria links to Rfam database...	0.31	0.30	0.32	138	1123818	305	44	250	11	323
CRW_00338	-	0.15	0.16	0.14	64	1052952	418	71	339	8	331
CRW_00381	-	0.33	0.34	0.32	189	2303139	503	71	332	100	368
CRW_00417	-	0.38	0.37	0.39	97	458154	163	22	130	11	165
CRW_00418	-	0.17	0.16	0.19	42	441104	195	25	159	11	218
CRW_00419	-	0.26	0.25	0.28	66	463932	175	16	152	7	199
CRW_00421	-	0.34	0.32	0.36	86	462964	166	22	131	13	180
CRW_00422	-	0.38	0.37	0.39	97	455287	169	22	129	18	166
CRW_00423	-	0.20	0.21	0.19	40	242348	179	26	142	11	149
CRW_00424	-	0.38	0.39	0.38	140	789031	253	23	202	28	223
CRW_00426	-	0.26	0.25	0.27	66	457200	190	24	156	10	199
CRW_00427	-	0.24	0.23	0.25	61	454339	196	32	149	15	200
CRW_00428	-	0.29	0.28	0.30	73	465855	179	27	140	12	187
CRW_00429	-	0.15	0.15	0.15	36	306701	203	48	151	4	197
CRW_00430	-	0.33	0.31	0.36	82	456260	154	27	121	6	184
CRW_00433	-	0.37	0.34	0.40	89	467805	139	16	118	5	174
CRW_00434	-	0.24	0.22	0.26	59	457218	179	11	158	10	204
CRW_00435	-	0.33	0.31	0.36	81	451499	155	16	129	10	184
CRW_00437	-	0.21	0.21	0.22	54	456243	200	25	168	7	206
CRW_00438	-	0.35	0.34	0.36	91	454325	175	25	140	10	177
CRW_00441	-	0.17	0.16	0.19	42	454358	185	31	150	4	220
CRW_00442	-	0.38	0.36	0.39	94	453389	153	25	120	8	167
CRW_00443	-	0.40	0.37	0.43	96	456268	147	23	103	21	164
CRW_00444	-	0.28	0.26	0.30	68	459131	169	33	129	7	195
CRW_00445	-	0.28	0.26	0.29	70	458165	178	24	144	10	195
CRW_00446	-	0.42	0.39	0.44	104	468762	140	16	114	10	161
CRW_00447	-	0.19	0.19	0.20	49	452433	207	33	161	13	211
CRW_00448	-	0.35	0.33	0.37	87	457211	166	26	122	18	174
CRW_00449	-	0.22	0.21	0.23	55	444853	191	24	164	3	205
CRW_00450	-	0.34	0.31	0.37	82	458184	155	13	124	18	180
CRW_00451	-	0.23	0.22	0.24	57	457204	199	24	161	14	207
CRW_00452	-	0.37	0.35	0.39	93	453390	155	24	121	10	169
CRW_00453	-	0.30	0.28	0.32	74	452448	164	23	131	10	187
CRW_00456	-	0.45	0.42	0.48	111	470705	135	19	100	16	154
CRW_00457	-	0.32	0.31	0.34	81	467792	167	22	133	12	183
CRW_00458	-	0.35	0.34	0.37	90	464887	164	30	123	11	174
CRW_00459	-	0.29	0.27	0.31	71	462012	175	27	131	17	192
CRW_00462	-	0.38	0.36	0.41	93	458178	151	18	114	19	168
CRW_00463	-	0.36	0.35	0.37	90	445799	160	21	130	9	164
CRW_00464	-	0.39	0.36	0.42	95	462015	141	15	116	10	169
CRW_00466	SSU_rRNA_bacteria links to Rfam database...	0.61	0.60	0.62	273	1116325	194	25	142	27	185
CRW_00522	-	0.18	0.19	0.17	145	3642803	725	127	575	23	637
CRW_00530	-	0.35	0.37	0.33	99	534795	217	51	150	16	169
CRW_00535	-	0.23	0.24	0.21	80	898096	325	72	222	31	248
CRW_00538	-	0.20	0.21	0.19	62	811841	294	70	202	22	238
CRW_00542	-	0.15	0.18	0.14	56	994342	387	102	255	30	261
CRW_00589	SSU_rRNA_bacteria links to Rfam database...	0.22	0.21	0.22	95	1094029	351	37	299	15	350
CRW_00590	SSU_rRNA_bacteria links to Rfam database...	0.32	0.31	0.33	141	1119330	303	41	244	18	311
CRW_00591	SSU_rRNA_bacteria links to Rfam database...	0.61	0.60	0.62	267	1098475	190	19	142	29	179
CRW_00594	-	0.15	0.16	0.14	63	1028433	428	50	349	29	332
CRW_00596	-	0.23	0.24	0.22	92	1024178	344	55	271	18	294
CRW_00597	-	0.24	0.25	0.23	101	1200032	387	51	291	45	310
CRW_00604	-	0.52	0.57	0.48	46	411682	216	14	36	166	35
CRW_00605	-	0.41	0.41	0.40	29	183848	142	13	31	98	41
CRW_00606	-	0.67	0.65	0.69	60	559066	262	4	23	235	32
CRW_00607	-	0.54	0.55	0.53	42	536051	276	8	29	239	35
CRW_00608	-	0.71	0.70	0.72	55	35702	25	6	15	4	24
CRW_00610	Intron_gpI links to Rfam database...	0.49	0.49	0.49	40	36233	43	7	35	1	41
CRW_00611	-	0.79	0.77	0.82	58	31304	17	0	13	4	17
CRW_00612	-	0.39	0.42	0.36	39	270372	196	5	64	127	54
CRW_00613	Intron_gpI links to Rfam database...	0.64	0.59	0.69	46	34913	29	1	20	8	32
CRW_00614	Intron_gpI links to Rfam database...	0.09	0.11	0.07	6	121690	145	21	54	70	51
CRW_00615	-	0.50	0.57	0.44	47	553770	285	24	37	224	35
CRW_00617	-	0.69	0.69	0.69	44	426362	237	1	19	217	20
CRW_00618	Intron_gpI links to Rfam database...	0.11	0.11	0.10	7	56211	83	13	49	21	54
CRW_00619	Intron_gpI links to Rfam database...	0.38	0.44	0.34	32	164930	138	28	35	75	41
CRW_00620	Intron_gpI links to Rfam database...	0.16	0.21	0.13	13	150871	158	31	60	67	50
CRW_00621	Intron_gpI links to Rfam database...	0.10	0.10	0.10	7	153109	156	13	52	91	64
CRW_00623	Intron_gpI links to Rfam database...	0.30	0.29	0.32	24	129720	119	11	40	68	59
CRW_00626	-	0.50	0.55	0.45	57	100899	86	26	43	17	47
CRW_00629	-	0.49	0.48	0.50	59	91260	61	12	47	2	63
CRW_00632	-	0.61	0.62	0.60	79	82896	59	9	44	6	49
CRW_00633	Intron_gpI links to Rfam database...	0.50	0.48	0.52	51	63447	50	10	38	2	55
CRW_00634	Intron_gpI links to Rfam database...	0.56	0.60	0.52	56	64513	53	17	34	2	38
CRW_00635	-	0.48	0.48	0.48	66	109140	82	10	62	10	71
CRW_00636	-	0.46	0.46	0.46	66	114817	82	10	67	5	77
CRW_00637	-	0.34	0.36	0.33	57	133730	120	21	95	4	101
CRW_00639	-	0.75	0.75	0.74	104	126615	53	15	22	16	34
CRW_00641	-	0.44	0.46	0.43	35	39821	55	10	37	8	41
CRW_00642	-	0.40	0.45	0.37	29	47199	58	14	36	8	36
CRW_00643	-	0.40	0.43	0.38	53	123116	98	27	60	11	69
CRW_00645	-	0.61	0.61	0.60	41	35443	39	5	22	12	26
CRW_00646	-	0.53	0.56	0.51	36	34909	41	5	30	6	28
CRW_00648	-	0.59	0.62	0.56	92	137912	74	18	53	3	56
CRW_00649	-	0.66	0.70	0.63	87	204341	121	14	38	69	37
CRW_00650	-	0.48	0.49	0.48	69	112906	80	9	66	5	73
CRW_00651	-	0.47	0.50	0.44	61	99989	80	20	58	2	60
CRW_00652	-	0.66	0.68	0.64	88	132217	71	8	42	21	42
CRW_00653	-	0.89	0.90	0.87	121	94691	20	8	10	2	13
CRW_00654	-	0.72	0.71	0.73	88	78090	37	4	28	5	36
CRW_00655	-	0.62	0.61	0.62	76	89131	50	9	37	4	48
CRW_00656	-	0.66	0.67	0.65	86	90392	53	13	34	6	43
CRW_00657	-	0.76	0.76	0.76	103	105895	36	3	29	4	33
CRW_00658	-	0.44	0.45	0.42	46	74582	64	20	43	1	56
CRW_00659	-	0.46	0.49	0.43	30	32315	49	10	30	9	31
CRW_00660	-	0.60	0.62	0.59	37	22092	26	7	19	0	23
CRW_00661	-	0.19	0.22	0.17	11	24245	56	15	39	2	40
CRW_00662	-	0.40	0.42	0.39	27	28611	49	7	35	7	38
CRW_00663	-	0.00	0.00	0.00	0	26031	76	12	63	1	61
CRW_00664	-	0.14	0.15	0.14	12	53540	87	15	61	11	66
CRW_00665	-	0.17	0.19	0.16	9	23597	50	10	37	3	39
CRW_00666	-	0.43	0.44	0.43	55	96014	84	11	61	12	71
CRW_00668	-	0.52	0.54	0.50	81	163717	97	17	63	17	69
CRW_00669	-	0.57	0.55	0.58	66	97347	65	9	39	17	53
CRW_00670	Intron_gpI links to Rfam database...	0.75	0.74	0.77	89	70009	30	5	22	3	31
CRW_00671	Intron_gpI links to Rfam database...	0.77	0.76	0.78	89	62721	30	6	19	5	28
CRW_00672	Intron_gpI links to Rfam database...	0.53	0.55	0.52	61	72273	60	21	35	4	50
CRW_00673	-	0.72	0.79	0.66	83	100002	56	25	18	13	22
CRW_00674	Intron_gpI links to Rfam database...	0.52	0.52	0.52	65	83310	63	12	49	2	59
CRW_00676	Intron_gpI links to Rfam database...	0.56	0.60	0.52	69	93396	67	13	50	4	46
CRW_00677	-	0.61	0.63	0.58	66	71897	54	13	34	7	39
CRW_00678	-	0.42	0.48	0.37	58	666280	305	27	70	208	63
CRW_00679	-	0.30	0.31	0.29	33	76521	88	14	68	6	74
CRW_00680	-	0.30	0.34	0.27	41	516483	253	27	85	141	81
CRW_00681	-	0.51	0.55	0.47	62	112919	84	22	47	15	50
CRW_00683	-	0.44	0.47	0.41	63	460166	242	29	62	151	72
CRW_00684	-	0.36	0.39	0.33	53	612010	296	36	72	188	82
CRW_00685	-	0.57	0.62	0.53	66	156955	102	19	40	43	40
CRW_00686	-	0.55	0.57	0.54	71	95134	69	7	54	8	54
CRW_00687	-	0.29	0.30	0.29	20	28610	51	12	38	1	46
CRW_00688	-	0.85	0.86	0.84	49	21887	12	0	9	3	8
CRW_00689	-	0.69	0.70	0.68	54	33590	28	11	15	2	23
CRW_00690	-	0.64	0.64	0.65	44	33343	28	11	13	4	25
CRW_00691	-	0.57	0.60	0.55	40	27188	35	6	27	2	27
CRW_00692	Intron_gpI links to Rfam database...	0.43	0.46	0.41	41	68536	66	18	40	8	49
CRW_00693	-	0.61	0.60	0.63	73	89137	59	2	41	16	49
CRW_00694	-	0.63	0.63	0.63	77	85782	52	6	40	6	45
CRW_00699	-	0.63	0.63	0.63	79	91680	48	6	41	1	47
CRW_00700	-	0.63	0.63	0.64	93	180755	88	9	44	35	54
CRW_00702	-	0.66	0.72	0.61	54	357346	213	10	25	178	21
CRW_00703	-	0.74	0.74	0.74	49	40404	31	3	14	14	17
CRW_00704	-	0.81	0.80	0.82	75	386669	195	4	12	179	19
CRW_00706	-	0.46	0.51	0.42	30	695538	341	7	35	299	29
CRW_00710	-	0.70	0.70	0.69	80	1040287	377	8	28	341	34
CRW_00712	-	0.47	0.54	0.41	58	952749	371	28	55	288	50
CRW_00713	-	0.65	0.65	0.65	66	731343	308	11	25	272	35
CRW_00714	-	0.20	0.22	0.18	24	186222	162	28	81	53	83
CRW_00715	-	0.76	0.73	0.78	76	69281	24	3	18	3	28
CRW_00716	-	0.84	0.85	0.83	76	193661	103	3	13	87	13
CRW_00717	-	0.66	0.66	0.66	97	153589	66	10	39	17	51
CRW_00718	-	0.81	0.80	0.83	153	189851	52	6	26	20	38
CRW_00719	-	0.55	0.56	0.55	51	230088	147	9	33	105	40
CRW_00720	-	0.17	0.19	0.16	17	208230	166	21	67	78	74
CRW_00721	-	0.51	0.59	0.45	40	58564	64	19	30	15	28
CRW_00763	SSU_rRNA_bacteria links to Rfam database...	0.20	0.20	0.21	90	1215581	387	50	299	38	356
CRW_00764	-	0.06	0.07	0.06	13	252912	196	31	160	5	183
CRW_00765	-	0.24	0.24	0.24	62	452416	208	35	163	10	195
CRW_00766	-	0.22	0.22	0.23	52	440169	187	23	147	17	188
CRW_00768	-	0.60	0.58	0.62	150	471663	116	14	79	23	109
CRW_00769	-	0.40	0.37	0.42	94	451502	146	20	109	17	158
CRW_00772	SSU_rRNA_bacteria links to Rfam database...	0.24	0.24	0.25	97	945607	320	41	255	24	307
CRW_00773	-	0.34	0.34	0.33	88	451460	186	30	147	9	171
CRW_00774	-	0.35	0.33	0.38	87	488335	169	17	127	25	176
CRW_00775	-	0.25	0.26	0.23	55	314586	190	42	138	10	157
CRW_00777	-	0.30	0.31	0.29	93	719076	260	47	184	29	211
CRW_00778	SSU_rRNA_bacteria links to Rfam database...	0.22	0.22	0.22	84	1201649	346	41	251	54	300
CRW_00779	-	0.25	0.25	0.25	104	1031342	333	41	279	13	318
CRW_00780	-	0.32	0.31	0.34	79	475565	169	23	133	13	176
CRW_00783	-	0.31	0.31	0.31	80	453374	183	18	156	9	179
CRW_00784	-	0.34	0.33	0.36	86	456250	171	32	122	17	176
CRW_00785	-	0.35	0.33	0.36	84	452443	161	27	122	12	169
CRW_00787	-	0.26	0.26	0.26	81	646638	256	41	193	22	225
CRW_00789	SSU_rRNA_bacteria links to Rfam database...	0.35	0.35	0.35	156	1137342	304	48	240	16	291
CRW_00793	-	0.25	0.26	0.24	97	1048678	351	44	257	50	280
CRW_00794	-	0.24	0.24	0.24	58	434539	200	18	163	19	188
CRW_00795	SSU_rRNA_bacteria links to Rfam database...	0.24	0.25	0.23	98	1152503	357	51	269	37	296
CRW_00796	-	0.25	0.24	0.26	57	384786	182	29	131	22	178
CRW_00797	-	0.22	0.23	0.22	79	692890	299	41	243	15	263
CRW_00800	SSU_rRNA_eukarya links to Rfam database...	0.52	0.52	0.52	243	1401506	288	31	195	62	227
CRW_00801	-	0.45	0.45	0.45	111	438269	150	33	103	14	138
CRW_00802	-	0.31	0.30	0.31	76	460076	184	36	132	16	177
CRW_00807	-	0.39	0.39	0.39	157	1391544	337	46	199	92	241
CRW_00808	-	0.31	0.33	0.29	117	1301289	391	68	217	106	239
CRW_00813	-	0.20	0.23	0.17	31	530781	292	52	101	139	102
CRW_00815	-	0.71	0.71	0.71	112	159737	52	12	34	6	46
CRW_00816	-	0.36	0.38	0.35	49	143775	111	19	73	19	80
CRW_00820	-	0.57	0.59	0.55	86	136347	79	13	57	9	59
CRW_00849	SSU_rRNA_bacteria links to Rfam database...	0.48	0.48	0.49	225	1117798	260	25	212	23	245
CRW_00997	SSU_rRNA_bacteria links to Rfam database...	0.52	0.52	0.52	239	1135819	238	24	196	18	225
CRW_01134	-	0.28	0.28	0.28	119	964927	318	32	277	9	308
CRW_01168	-	0.38	0.38	0.38	156	900738	277	34	225	18	255
CRW_01186	-	0.27	0.27	0.27	104	836186	293	35	246	12	282
CRW_01188	-	0.19	0.19	0.19	76	837466	330	48	275	7	317
CRW_01189	-	0.22	0.22	0.21	87	862232	338	49	273	16	305
CRW_01214	-	0.34	0.34	0.35	136	931909	261	42	208	11	269
CRW_01222	-	0.25	0.25	0.25	98	912881	302	58	239	5	299
CRW_01224	-	0.37	0.37	0.38	145	912893	247	26	212	9	252
CRW_01239	-	0.23	0.23	0.23	87	840080	307	46	243	18	295
CRW_01250	-	0.24	0.24	0.24	89	781505	291	39	242	10	289
CRW_01260	-	0.17	0.17	0.17	66	912885	337	46	279	12	327
CRW_01266	-	0.27	0.28	0.27	105	818167	301	42	246	13	276
CRW_01271	-	0.30	0.30	0.30	116	827149	289	35	241	13	265
CRW_01275	-	0.39	0.39	0.39	169	1082226	281	38	223	20	263
CRW_01283	-	0.39	0.39	0.40	161	963559	264	37	209	18	248
CRW_01314	-	0.25	0.25	0.26	101	937377	297	39	248	10	306
CRW_01343	SSU_rRNA_archaea links to Rfam database...	0.34	0.33	0.34	145	977474	293	46	236	11	289
CRW_01344	-	0.33	0.33	0.34	120	791554	252	45	192	15	246
PDB_00005	Tymo_tRNA-like links to Rfam database...	1.00	1.00	1.00	14	932	0	0	0	0	0
PDB_00018	-	0.20	0.20	0.22	4	1017	14	2	12	0	16
PDB_00020	-	0.38	0.35	0.44	7	764	9	0	9	0	13
PDB_00041	-	1.00	1.00	1.00	12	618	0	0	0	0	0
PDB_00053	-	1.00	1.00	1.00	11	424	0	0	0	0	0
PDB_00056	-	0.93	0.88	1.00	14	616	0	0	0	0	2
PDB_00072	-	0.37	0.39	0.36	81	148017	142	17	125	0	129
PDB_00078	-	0.49	0.47	0.51	54	49665	51	6	45	0	61
PDB_00079	-	0.70	0.65	0.74	93	121646	65	8	24	33	49
PDB_00123	-	-0.01	0.00	0.00	0	4151	35	0	35	0	36
PDB_00124	-	0.86	0.90	0.82	9	485	2	2	0	0	1
PDB_00128	-	0.50	0.43	0.60	6	486	4	1	3	0	8
PDB_00134	-	0.94	1.00	0.89	8	369	1	1	0	0	0
PDB_00138	-	0.94	1.00	0.89	8	369	1	1	0	0	0
PDB_00209	-	0.96	1.00	0.92	11	549	1	1	0	0	0
PDB_00243	-	1.00	1.00	1.00	12	618	0	0	0	0	0
PDB_00278	-	0.19	0.19	0.19	14	24904	58	7	51	0	58
PDB_00352	-	0.89	0.79	1.00	15	1210	0	0	0	0	4
PDB_00370	-	0.09	0.12	0.07	3	15179	45	12	31	2	22
PDB_00403	-	0.52	0.53	0.51	81	124591	86	16	62	8	72
PDB_00409	-	0.28	0.32	0.24	79	688221	321	66	185	70	166
PDB_00423	-	0.24	0.23	0.26	17	26731	48	2	46	0	57
PDB_00447	-	0.97	1.00	0.94	44	7093	3	3	0	0	0
PDB_00571	tRNA links to Rfam database...	0.17	0.16	0.19	4	3300	17	6	11	0	21
PDB_00701	-	0.47	0.46	0.49	50	45349	53	5	47	1	59
PDB_00703	SSU_rRNA_bacteria links to Rfam database...	0.50	0.48	0.53	239	1073392	239	21	193	25	256
PDB_00713	-	0.43	0.43	0.45	9	1996	11	0	11	0	12
PDB_00716	HDV_ribozyme links to Rfam database...	-0.01	0.00	0.00	0	2675	27	1	25	1	23
PDB_00747	-	0.72	0.65	0.80	52	24466	13	0	13	0	28
PDB_00804	-	0.00	0.00	0.00	0	15346	56	10	44	2	50
PDB_00805	-	0.69	0.67	0.71	201	467744	108	13	70	25	101
PDB_00827	Intron_gpI links to Rfam database...	0.50	0.46	0.55	37	26961	31	1	29	1	44
PDB_00828	Purine links to Rfam database...	0.88	0.78	1.00	21	2464	0	0	0	0	6
PDB_00829	Purine links to Rfam database...	0.86	0.75	1.00	18	2260	0	0	0	0	6
PDB_00842	-	1.00	1.00	1.00	8	370	0	0	0	0	0
PDB_00851	-	0.45	0.39	0.53	16	4723	14	0	14	0	25
PDB_00857	-	1.00	1.00	1.00	15	1066	0	0	0	0	0
PDB_00874	-	0.10	0.10	0.14	2	932	12	2	10	0	18
PDB_00886	-	-0.01	0.00	0.00	0	4148	38	0	38	0	40
PDB_00917	-	0.50	0.48	0.52	46	35157	48	4	38	6	49
PDB_00918	-	0.93	1.00	0.88	7	317	1	1	0	0	0
PDB_00919	RNaseP_bact_a links to Rfam database...	0.50	0.47	0.54	48	44164	44	3	38	3	55
PDB_01009	tRNA links to Rfam database...	0.52	0.57	0.48	12	2460	13	5	8	0	9
PDB_01020	Purine links to Rfam database...	0.23	0.22	0.26	5	2259	14	2	12	0	18
PDB_01040	-	0.30	0.30	0.33	6	1110	12	0	12	0	14
PDB_01059	-	0.93	1.00	0.88	7	223	1	1	0	0	0
PDB_01070	-	0.14	0.13	0.15	7	12673	41	2	38	1	47
PDB_01073	SAM links to Rfam database...	0.75	0.65	0.88	22	4346	4	0	3	1	12
PDB_01092	glmS links to Rfam database...	0.71	0.67	0.74	35	10106	13	2	10	1	17
PDB_01105	SSU_rRNA_bacteria links to Rfam database...	0.51	0.50	0.52	269	1433453	278	27	222	29	271
PDB_01120	SSU_rRNA_bacteria links to Rfam database...	0.48	0.45	0.51	239	1204657	247	27	205	15	288
PDB_01129	-	0.26	0.28	0.25	20	35430	66	16	45	5	51
PDB_01157	-	0.28	0.28	0.28	27	49991	68	14	54	0	71
PDB_01166	-	0.45	0.43	0.47	92	181909	109	22	83	4	120
PDB_01194	-	0.73	0.60	0.90	9	486	1	1	0	0	6
PDB_01201	-	0.82	0.68	1.00	15	1113	0	0	0	0	7
PDB_01203	-	0.71	0.63	0.80	12	1161	3	2	1	0	7
PDB_01250	-	0.10	0.10	0.10	4	12051	35	8	27	0	37
PDB_01260	-	0.41	0.36	0.47	9	1811	10	0	10	0	16
PDB_01261	-	0.50	0.45	0.55	152	467752	128	4	120	4	184
PDB_01273	SSU_rRNA_bacteria links to Rfam database...	0.47	0.46	0.49	225	1117799	263	23	213	27	266
PDB_01281	-	-0.03	0.00	0.00	0	366	12	0	12	0	14
PDB_01299	-	0.90	0.87	0.93	13	889	1	1	0	0	2
PDB_01309	-	-0.01	0.00	0.00	0	9118	62	9	53	0	39
RFA_00597	Telomerase-vert links to Rfam database...	0.52	0.53	0.51	58	97789	83	8	48	27	51
RFA_00598	Telomerase-vert links to Rfam database...	0.68	0.66	0.69	67	84569	57	6	24	27	34
RFA_00599	Telomerase-vert links to Rfam database...	0.63	0.68	0.60	75	101349	70	18	33	19	36
RFA_00600	Telomerase-vert links to Rfam database...	0.63	0.70	0.56	70	120170	88	32	23	33	30
RFA_00601	Telomerase-vert links to Rfam database...	0.48	0.50	0.46	57	99111	86	21	46	19	57
RFA_00602	Telomerase-vert links to Rfam database...	0.69	0.72	0.67	83	101351	61	10	31	20	33
RFA_00632	HDV_ribozyme links to Rfam database...	0.88	0.89	0.86	25	4066	6	2	2	2	3
RFA_00636	HDV_ribozyme links to Rfam database...	0.95	0.96	0.93	27	3976	4	2	0	2	1
RFA_00767	Corona_pk3 links to Rfam database...	1.00	1.00	1.00	18	1873	3	0	0	3	0
RFA_00768	Corona_pk3 links to Rfam database...	1.00	1.00	1.00	18	1873	2	0	0	2	0
RFA_00769	Corona_pk3 links to Rfam database...	0.97	1.00	0.95	18	1934	3	1	0	2	0
RFA_00770	Corona_pk3 links to Rfam database...	0.88	0.78	1.00	14	2002	3	0	0	3	4
RFA_00773	Corona_pk3 links to Rfam database...	0.97	1.00	0.95	18	1934	4	1	0	3	0
RFA_00779	Corona_pk3 links to Rfam database...	0.97	0.94	1.00	17	1936	2	0	0	2	1
RFA_00808	RydC links to Rfam database...	1.00	1.00	1.00	16	2000	0	0	0	0	0
RFA_00809	RydC links to Rfam database...	0.79	0.81	0.76	13	2128	4	0	4	0	3
TMR_00007	tmRNA links to Rfam database...	0.29	0.28	0.30	30	61677	74	11	58	5	78
TMR_00008	tmRNA links to Rfam database...	0.54	0.54	0.54	57	65960	58	9	40	9	49
TMR_00010	tmRNA links to Rfam database...	0.23	0.24	0.23	23	57869	78	13	65	0	73
TMR_00012	tmRNA links to Rfam database...	0.28	0.28	0.27	23	64535	77	20	42	15	58
TMR_00014	tmRNA links to Rfam database...	0.57	0.55	0.59	61	68531	50	12	31	7	49
TMR_00017	tmRNA links to Rfam database...	0.36	0.37	0.36	38	67055	74	15	53	6	64
TMR_00018	tmRNA links to Rfam database...	0.30	0.32	0.30	29	64522	75	10	59	6	63
TMR_00028	tmRNA links to Rfam database...	0.31	0.33	0.29	32	62725	82	14	64	4	65
TMR_00030	tmRNA links to Rfam database...	0.25	0.25	0.24	28	75740	92	12	75	5	83
TMR_00034	tmRNA links to Rfam database...	0.65	0.65	0.66	71	59923	43	12	25	6	39
TMR_00035	tmRNA links to Rfam database...	0.38	0.40	0.36	39	67789	73	9	59	5	59
TMR_00036	tmRNA links to Rfam database...	0.59	0.59	0.58	60	90422	72	11	32	29	41
TMR_00038	tmRNA links to Rfam database...	0.24	0.25	0.24	27	71141	89	12	73	4	83
TMR_00042	tmRNA links to Rfam database...	0.24	0.24	0.24	24	62735	79	9	67	3	74
TMR_00046	tmRNA links to Rfam database...	0.54	0.55	0.54	53	62736	49	11	35	3	43
TMR_00047	tmRNA links to Rfam database...	0.26	0.30	0.23	17	48441	74	16	42	16	40
TMR_00048	tmRNA links to Rfam database...	0.32	0.34	0.30	32	64875	78	9	64	5	63
TMR_00049	tmRNA links to Rfam database...	0.52	0.53	0.51	46	63099	57	9	36	12	41
TMR_00051	tmRNA links to Rfam database...	0.65	0.61	0.70	57	65621	44	2	23	19	37
TMR_00055	tmRNA links to Rfam database...	0.14	0.15	0.14	17	78881	105	22	83	0	97
TMR_00057	tmRNA links to Rfam database...	0.14	0.16	0.12	13	73810	107	30	67	10	66
TMR_00061	tmRNA links to Rfam database...	0.22	0.23	0.22	23	59579	90	10	73	7	76
TMR_00062	tmRNA links to Rfam database...	0.52	0.54	0.50	56	78495	66	16	39	11	48
TMR_00064	tmRNA links to Rfam database...	0.40	0.40	0.40	41	76926	69	19	42	8	62
TMR_00065	tmRNA links to Rfam database...	0.54	0.57	0.51	60	76519	59	16	41	2	46
TMR_00067	tmRNA links to Rfam database...	0.44	0.45	0.43	51	82095	73	14	55	4	63
TMR_00073	tmRNA links to Rfam database...	0.46	0.45	0.47	53	65591	60	6	53	1	64
TMR_00076	tmRNA links to Rfam database...	0.33	0.34	0.32	34	70770	78	15	57	6	66
TMR_00080	tmRNA links to Rfam database...	0.59	0.61	0.56	59	70395	49	16	30	3	37
TMR_00081	tmRNA links to Rfam database...	0.47	0.45	0.48	48	67062	52	12	39	1	58
TMR_00082	tmRNA links to Rfam database...	0.63	0.64	0.63	61	67799	41	12	24	5	35
TMR_00083	tmRNA links to Rfam database...	0.56	0.57	0.56	60	68157	51	13	35	3	45
TMR_00092	tmRNA links to Rfam database...	0.64	0.67	0.62	68	67418	47	11	31	5	33
TMR_00093	tmRNA links to Rfam database...	0.50	0.53	0.48	54	64148	61	14	45	2	48
TMR_00096	tmRNA links to Rfam database...	0.45	0.46	0.43	46	64874	64	11	49	4	54
TMR_00101	tmRNA links to Rfam database...	0.44	0.44	0.44	47	64154	64	8	52	4	60
TMR_00102	tmRNA links to Rfam database...	0.33	0.35	0.31	35	64147	83	16	63	4	66
TMR_00103	tmRNA links to Rfam database...	0.56	0.56	0.55	61	64151	51	10	39	2	47
TMR_00104	-	0.08	0.10	0.07	7	66700	94	34	54	6	63
TMR_00106	tmRNA links to Rfam database...	0.47	0.49	0.45	59	89968	76	24	49	3	61
TMR_00109	tmRNA links to Rfam database...	0.36	0.35	0.36	43	88291	79	13	63	3	79
TMR_00111	tmRNA links to Rfam database...	0.31	0.32	0.29	39	90392	97	18	76	3	83
TMR_00116	tmRNA links to Rfam database...	0.67	0.66	0.67	69	64877	47	5	29	13	35
TMR_00117	tmRNA links to Rfam database...	0.60	0.60	0.60	71	80081	57	7	41	9	47
TMR_00118	tmRNA links to Rfam database...	0.37	0.38	0.37	45	81285	83	6	70	7	75
TMR_00119	tmRNA links to Rfam database...	0.53	0.54	0.53	56	71904	57	8	42	7	48
TMR_00123	tmRNA links to Rfam database...	0.46	0.47	0.46	47	66327	57	11	45	1	54
TMR_00124	tmRNA links to Rfam database...	0.46	0.48	0.45	47	70396	71	15	42	14	51
TMR_00125	tmRNA links to Rfam database...	0.50	0.49	0.52	49	64166	51	9	37	5	50
TMR_00127	tmRNA links to Rfam database...	0.24	0.25	0.23	24	62729	85	24	58	3	73
TMR_00128	tmRNA links to Rfam database...	0.40	0.40	0.40	38	60980	59	6	51	2	58
TMR_00131	tmRNA links to Rfam database...	0.28	0.27	0.28	27	64885	75	12	56	7	72
TMR_00135	tmRNA links to Rfam database...	0.59	0.57	0.61	56	62743	46	4	32	10	43
TMR_00136	tmRNA links to Rfam database...	0.27	0.30	0.24	30	74567	97	20	74	3	71
TMR_00137	tmRNA links to Rfam database...	0.27	0.28	0.26	25	60980	78	14	56	8	64
TMR_00139	tmRNA links to Rfam database...	0.56	0.60	0.52	55	62023	56	19	31	6	36
TMR_00140	tmRNA links to Rfam database...	0.52	0.52	0.51	52	73819	65	6	43	16	48
TMR_00142	tmRNA links to Rfam database...	0.45	0.47	0.44	48	70767	70	15	46	9	54
TMR_00143	tmRNA links to Rfam database...	0.45	0.46	0.45	47	64516	67	9	48	10	56
TMR_00144	tmRNA links to Rfam database...	0.25	0.26	0.23	27	74189	91	15	74	2	76
TMR_00146	tmRNA links to Rfam database...	0.87	0.88	0.86	37	32088	34	2	4	28	5
TMR_00150	tmRNA links to Rfam database...	0.71	0.71	0.71	30	43029	49	2	10	37	12
TMR_00152	tmRNA links to Rfam database...	0.25	0.26	0.25	30	81286	101	13	77	11	85
TMR_00155	tmRNA links to Rfam database...	0.49	0.47	0.52	49	61682	53	3	42	8	55
TMR_00156	tmRNA links to Rfam database...	0.20	0.20	0.21	19	60286	77	9	64	4	78
TMR_00158	tmRNA links to Rfam database...	0.43	0.42	0.44	42	60630	60	3	51	6	57
TMR_00159	tmRNA links to Rfam database...	0.23	0.25	0.22	23	62023	87	18	64	5	69
TMR_00160	tmRNA links to Rfam database...	0.67	0.65	0.68	62	64529	40	6	23	11	33
TMR_00164	tmRNA links to Rfam database...	0.40	0.40	0.40	42	66690	71	7	56	8	64
TMR_00165	tmRNA links to Rfam database...	0.30	0.32	0.29	31	61670	84	12	63	9	66
TMR_00166	tmRNA links to Rfam database...	0.34	0.33	0.35	33	61683	65	8	52	5	68
TMR_00168	tmRNA links to Rfam database...	0.80	0.79	0.80	90	60963	26	6	16	4	24
TMR_00173	tmRNA links to Rfam database...	0.31	0.36	0.28	15	42141	67	16	23	28	27
TMR_00179	tmRNA links to Rfam database...	0.53	0.55	0.51	54	67055	63	11	41	11	44
TMR_00180	tmRNA links to Rfam database...	0.57	0.58	0.56	57	67060	55	7	37	11	42
TMR_00182	tmRNA links to Rfam database...	0.19	0.20	0.18	20	66321	93	11	78	4	82
TMR_00183	tmRNA links to Rfam database...	0.20	0.20	0.20	21	63084	93	5	80	8	82
TMR_00184	tmRNA links to Rfam database...	0.39	0.40	0.39	41	63084	67	6	59	2	61
TMR_00193	tmRNA links to Rfam database...	0.43	0.44	0.42	35	59257	58	11	37	10	45
TMR_00194	tmRNA links to Rfam database...	0.48	0.48	0.47	45	62740	61	10	40	11	48
TMR_00196	tmRNA links to Rfam database...	0.31	0.31	0.30	30	60976	74	8	61	5	67
TMR_00199	tmRNA links to Rfam database...	0.55	0.58	0.52	53	62733	56	19	30	7	39
TMR_00200	-	0.56	0.56	0.56	42	41541	43	3	30	10	33
TMR_00204	tmRNA links to Rfam database...	0.40	0.40	0.40	39	60280	65	16	43	6	58
TMR_00207	tmRNA links to Rfam database...	0.36	0.35	0.36	36	72291	70	4	59	7	67
TMR_00223	tmRNA links to Rfam database...	0.09	0.09	0.09	9	64163	93	16	73	4	86
TMR_00224	tmRNA links to Rfam database...	0.33	0.34	0.33	34	64877	70	12	57	1	67
TMR_00226	tmRNA links to Rfam database...	0.30	0.32	0.28	34	69631	87	16	70	1	71
TMR_00227	tmRNA links to Rfam database...	0.27	0.29	0.26	29	70013	86	12	71	3	72
TMR_00228	tmRNA links to Rfam database...	0.29	0.31	0.27	34	88284	99	25	67	7	74
TMR_00234	tmRNA links to Rfam database...	0.26	0.27	0.25	28	58885	87	12	71	4	74
TMR_00238	tmRNA links to Rfam database...	0.15	0.17	0.14	17	84548	109	17	84	8	84
TMR_00239	tmRNA links to Rfam database...	0.46	0.48	0.45	46	61673	59	11	46	2	50
TMR_00240	tmRNA links to Rfam database...	0.21	0.24	0.20	20	63089	84	22	59	3	65
TMR_00246	-	0.69	0.68	0.70	23	78177	107	2	8	97	11
TMR_00248	tmRNA links to Rfam database...	0.12	0.16	0.10	6	54225	93	25	29	39	32
TMR_00257	tmRNA links to Rfam database...	0.25	0.24	0.26	24	67068	73	8	61	4	74
TMR_00259	tmRNA links to Rfam database...	0.60	0.60	0.60	62	67792	45	13	29	3	41
TMR_00261	tmRNA links to Rfam database...	0.53	0.54	0.51	55	66688	55	14	38	3	46
TMR_00262	tmRNA links to Rfam database...	0.50	0.53	0.48	55	74190	60	19	41	0	49
TMR_00271	tmRNA links to Rfam database...	0.49	0.48	0.49	44	64171	54	8	38	8	47
TMR_00274	tmRNA links to Rfam database...	0.30	0.30	0.29	32	66684	85	13	66	6	73
TMR_00278	tmRNA links to Rfam database...	0.44	0.45	0.42	46	67787	72	7	56	9	56
TMR_00279	tmRNA links to Rfam database...	0.52	0.52	0.51	49	68910	57	10	37	10	45
TMR_00280	tmRNA links to Rfam database...	0.48	0.50	0.47	50	65959	69	9	48	12	51
TMR_00283	tmRNA links to Rfam database...	0.54	0.54	0.54	52	65244	53	5	40	8	44
TMR_00289	tmRNA links to Rfam database...	0.60	0.61	0.58	60	67058	55	11	32	12	38
TMR_00290	tmRNA links to Rfam database...	0.19	0.21	0.19	19	64159	91	15	68	8	73
TMR_00296	tmRNA links to Rfam database...	0.25	0.27	0.24	26	68899	83	14	67	2	72
TMR_00298	tmRNA links to Rfam database...	0.43	0.46	0.40	46	68151	69	18	50	1	55
TMR_00300	tmRNA links to Rfam database...	0.53	0.54	0.53	60	70387	64	9	44	11	52
TMR_00301	tmRNA links to Rfam database...	0.31	0.33	0.30	32	82108	83	21	54	8	64
TMR_00302	tmRNA links to Rfam database...	0.25	0.28	0.22	26	77304	95	24	67	4	68
TMR_00305	tmRNA links to Rfam database...	0.69	0.66	0.73	67	60983	34	5	20	9	35
TMR_00306	tmRNA links to Rfam database...	0.33	0.32	0.33	34	64159	68	11	57	0	72
TMR_00310	tmRNA links to Rfam database...	0.65	0.65	0.65	64	63805	39	9	25	5	34
TMR_00317	tmRNA links to Rfam database...	0.54	0.56	0.53	57	68157	54	14	37	3	45
TMR_00331	tmRNA links to Rfam database...	0.51	0.56	0.46	46	66696	71	12	41	18	36
TMR_00332	tmRNA links to Rfam database...	0.39	0.38	0.40	38	67065	62	9	49	4	61
TMR_00334	tmRNA links to Rfam database...	0.25	0.25	0.25	25	66693	81	10	67	4	76
TMR_00337	tmRNA links to Rfam database...	0.57	0.56	0.59	67	82914	51	15	32	4	52
TMR_00340	tmRNA links to Rfam database...	0.47	0.48	0.46	39	64176	65	7	39	19	42
TMR_00341	tmRNA links to Rfam database...	0.18	0.20	0.17	18	63085	90	22	65	3	74
TMR_00343	tmRNA links to Rfam database...	0.31	0.30	0.32	32	64880	76	12	56	8	73
TMR_00345	tmRNA links to Rfam database...	0.52	0.52	0.53	54	63801	56	9	39	8	50
TMR_00346	tmRNA links to Rfam database...	0.49	0.52	0.46	49	64155	59	15	42	2	45
TMR_00348	tmRNA links to Rfam database...	0.07	0.07	0.07	7	77324	108	11	79	18	92
TMR_00352	tmRNA links to Rfam database...	0.51	0.55	0.47	41	95179	84	17	29	38	34
TMR_00353	tmRNA links to Rfam database...	0.43	0.43	0.44	45	84153	73	15	42	16	60
TMR_00357	tmRNA links to Rfam database...	0.40	0.41	0.39	38	82931	75	22	37	16	54
TMR_00358	tmRNA links to Rfam database...	0.25	0.25	0.24	25	74975	93	15	63	15	74
TMR_00361	-	0.35	0.42	0.30	30	93428	88	29	41	18	42
TMR_00366	tmRNA links to Rfam database...	0.28	0.28	0.29	28	67798	83	12	58	13	72
TMR_00372	tmRNA links to Rfam database...	0.60	0.61	0.58	59	70399	55	7	35	13	37
TMR_00374	tmRNA links to Rfam database...	0.26	0.28	0.24	26	81700	87	23	61	3	66
TMR_00375	tmRNA links to Rfam database...	0.39	0.42	0.37	41	73424	72	27	44	1	57
TMR_00376	tmRNA links to Rfam database...	0.53	0.56	0.51	53	74587	66	16	35	15	42
TMR_00378	tmRNA links to Rfam database...	0.29	0.30	0.28	29	67791	87	7	69	11	68
TMR_00383	tmRNA links to Rfam database...	0.18	0.19	0.17	19	66681	103	15	80	8	81
TMR_00384	tmRNA links to Rfam database...	0.32	0.31	0.32	34	65597	78	6	66	6	74
TMR_00393	tmRNA links to Rfam database...	0.57	0.62	0.52	33	53237	58	14	17	27	20
TMR_00395	tmRNA links to Rfam database...	0.61	0.57	0.66	62	64526	38	4	28	6	47
TMR_00398	tmRNA links to Rfam database...	0.67	0.65	0.69	69	65241	37	2	29	6	37
TMR_00399	tmRNA links to Rfam database...	0.16	0.17	0.15	16	64871	97	27	66	4	78
TMR_00404	tmRNA links to Rfam database...	0.28	0.30	0.26	28	67421	90	22	57	11	64
TMR_00408	tmRNA links to Rfam database...	0.61	0.64	0.58	56	65970	49	13	27	9	32
TMR_00409	tmRNA links to Rfam database...	0.67	0.76	0.59	35	68576	69	10	14	45	11
TMR_00411	tmRNA links to Rfam database...	0.55	0.56	0.54	49	60984	47	10	32	5	38
TMR_00415	tmRNA links to Rfam database...	0.36	0.36	0.36	36	67062	66	13	50	3	65
TMR_00419	tmRNA links to Rfam database...	0.41	0.41	0.42	45	81702	82	11	52	19	66
TMR_00422	tmRNA links to Rfam database...	0.52	0.54	0.50	50	67796	59	12	38	9	42
TMR_00423	tmRNA links to Rfam database...	0.11	0.14	0.10	10	63800	104	25	68	11	63
TMR_00427	tmRNA links to Rfam database...	0.31	0.31	0.31	30	67432	71	11	55	5	67
TMR_00429	tmRNA links to Rfam database...	0.41	0.40	0.42	44	74587	71	6	54	11	65
TMR_00430	tmRNA links to Rfam database...	0.37	0.38	0.36	41	82507	79	15	58	6	68
TMR_00431	tmRNA links to Rfam database...	0.67	0.67	0.66	37	51947	64	8	11	45	18
TMR_00432	tmRNA links to Rfam database...	0.48	0.51	0.46	53	79685	70	16	46	8	51
TMR_00433	tmRNA links to Rfam database...	0.45	0.48	0.42	51	80078	72	14	57	1	55
TMR_00439	tmRNA links to Rfam database...	0.38	0.40	0.36	40	68524	81	20	51	10	61
TMR_00441	tmRNA links to Rfam database...	0.14	0.16	0.13	13	62031	92	25	59	8	70
TMR_00443	tmRNA links to Rfam database...	0.45	0.45	0.46	47	67058	58	14	42	2	57
TMR_00448	tmRNA links to Rfam database...	0.45	0.46	0.45	42	62034	58	6	46	6	50
TMR_00451	tmRNA links to Rfam database...	0.17	0.19	0.16	17	63441	88	16	72	0	72
TMR_00457	tmRNA links to Rfam database...	0.59	0.59	0.59	60	78504	49	12	30	7	42
TMR_00458	tmRNA links to Rfam database...	0.20	0.20	0.20	19	63449	85	19	59	7	74
TMR_00460	tmRNA links to Rfam database...	0.54	0.54	0.54	57	79295	57	9	40	8	49
TMR_00465	tmRNA links to Rfam database...	0.24	0.26	0.22	24	64152	85	23	62	0	70
TMR_00469	tmRNA links to Rfam database...	0.40	0.41	0.38	41	64513	66	11	55	0	59
TMR_00472	tmRNA links to Rfam database...	0.36	0.38	0.35	37	64514	72	24	45	3	60
TMR_00478	tmRNA links to Rfam database...	0.43	0.45	0.42	45	71902	66	17	46	3	54
TMR_00498	tmRNA links to Rfam database...	0.52	0.54	0.51	53	68903	61	11	39	11	46
TMR_00499	tmRNA links to Rfam database...	0.20	0.21	0.19	21	64509	97	7	83	7	78
TMR_00501	tmRNA links to Rfam database...	0.30	0.30	0.30	28	62387	71	8	58	5	64
TMR_00502	tmRNA links to Rfam database...	0.35	0.38	0.32	35	75358	83	17	56	10	58
TMR_00503	tmRNA links to Rfam database...	0.39	0.37	0.41	41	67796	67	5	54	8	70
TMR_00519	tmRNA links to Rfam database...	0.14	0.15	0.13	14	63086	100	16	74	10	81
TMR_00520	tmRNA links to Rfam database...	0.36	0.37	0.35	37	63085	78	13	55	10	62
TMR_00522	tmRNA links to Rfam database...	0.36	0.36	0.36	35	63092	72	11	52	9	62
TMR_00528	tmRNA links to Rfam database...	0.13	0.13	0.12	13	63082	105	12	83	10	84
TMR_00540	tmRNA links to Rfam database...	0.45	0.45	0.46	47	73433	65	4	52	9	57
TMR_00541	tmRNA links to Rfam database...	0.49	0.49	0.50	51	61673	60	3	49	8	54
TMR_00544	tmRNA links to Rfam database...	0.57	0.57	0.57	62	89567	54	17	30	7	46
TMR_00547	tmRNA links to Rfam database...	0.51	0.50	0.52	50	65245	48	3	43	2	50
TMR_00553	tmRNA links to Rfam database...	0.31	0.31	0.32	25	48127	59	8	45	6	56
TMR_00559	tmRNA links to Rfam database...	0.41	0.40	0.42	40	62385	60	11	45	4	61
TMR_00560	tmRNA links to Rfam database...	0.41	0.42	0.41	41	60975	68	6	53	9	57
TMR_00562	tmRNA links to Rfam database...	0.12	0.13	0.11	13	72649	110	22	87	1	89
TMR_00563	tmRNA links to Rfam database...	0.37	0.39	0.35	40	75352	81	19	55	7	63
TMR_00566	tmRNA links to Rfam database...	0.53	0.52	0.54	52	60630	53	5	39	9	48
TMR_00568	tmRNA links to Rfam database...	0.59	0.59	0.60	58	60630	47	3	35	9	41
TMR_00570	tmRNA links to Rfam database...	0.42	0.43	0.42	42	60277	69	6	53	10	55
TMR_00571	tmRNA links to Rfam database...	0.59	0.60	0.58	59	60625	47	7	35	5	40
TMR_00576	tmRNA links to Rfam database...	0.57	0.57	0.57	58	60277	52	9	34	9	44
TMR_00579	tmRNA links to Rfam database...	0.27	0.31	0.24	28	80486	96	21	66	9	62
TMR_00580	tmRNA links to Rfam database...	0.32	0.31	0.32	31	60630	70	13	52	5	69
TMR_00581	tmRNA links to Rfam database...	0.34	0.36	0.32	35	62373	77	12	61	4	63
TMR_00584	tmRNA links to Rfam database...	0.40	0.42	0.38	41	60967	72	8	59	5	56
TMR_00586	tmRNA links to Rfam database...	0.23	0.25	0.22	24	60964	88	18	69	1	73
TMR_00587	tmRNA links to Rfam database...	0.78	0.76	0.80	76	61330	24	4	15	5	24
TMR_00588	tmRNA links to Rfam database...	0.21	0.22	0.21	22	77314	94	20	65	9	79
TMR_00594	tmRNA links to Rfam database...	0.22	0.22	0.22	23	79295	88	14	69	5	81
TMR_00596	tmRNA links to Rfam database...	0.27	0.29	0.25	28	78099	91	19	64	8	67
TMR_00599	tmRNA links to Rfam database...	0.15	0.18	0.13	13	63088	99	35	54	10	59
TMR_00600	tmRNA links to Rfam database...	0.18	0.18	0.18	21	79686	95	18	75	2	94
TMR_00601	tmRNA links to Rfam database...	0.56	0.57	0.55	24	58952	77	2	18	57	18
TMR_00603	tmRNA links to Rfam database...	0.64	0.65	0.64	28	60334	76	7	9	60	15
TMR_00604	tmRNA links to Rfam database...	0.72	0.72	0.72	81	62722	32	10	22	0	31
TMR_00605	tmRNA links to Rfam database...	0.50	0.50	0.50	54	74196	56	20	35	1	54
TMR_00606	tmRNA links to Rfam database...	0.44	0.46	0.42	49	68890	72	8	59	5	58
TMR_00609	tmRNA links to Rfam database...	0.69	0.70	0.68	79	63430	40	6	31	3	34
TMR_00610	tmRNA links to Rfam database...	0.61	0.62	0.62	64	62024	52	7	33	12	40
TMR_00611	tmRNA links to Rfam database...	0.43	0.45	0.41	46	61314	65	16	49	0	56
TMR_00612	tmRNA links to Rfam database...	0.40	0.41	0.40	43	60618	68	9	56	3	61
TMR_00614	tmRNA links to Rfam database...	0.30	0.30	0.31	31	60975	75	8	61	6	73
TMR_00615	tmRNA links to Rfam database...	0.37	0.38	0.37	36	63805	72	14	48	10	60
TMR_00616	tmRNA links to Rfam database...	0.37	0.37	0.36	37	67058	71	18	48	5	62
TMR_00617	tmRNA links to Rfam database...	0.38	0.41	0.35	24	34647	55	13	32	10	34
TMR_00623	tmRNA links to Rfam database...	0.50	0.50	0.51	54	61319	56	2	50	4	54
TMR_00624	tmRNA links to Rfam database...	0.54	0.54	0.54	58	62374	61	5	44	12	50
TMR_00625	tmRNA links to Rfam database...	0.21	0.22	0.20	23	78889	95	28	63	4	83
TMR_00626	tmRNA links to Rfam database...	0.37	0.39	0.35	42	67777	81	15	62	4	67
TMR_00680	tmRNA links to Rfam database...	0.20	0.21	0.19	21	67788	91	20	67	4	78
TMR_00681	tmRNA links to Rfam database...	0.43	0.42	0.43	41	65971	64	7	47	10	56
TMR_00683	tmRNA links to Rfam database...	0.33	0.35	0.32	35	82917	79	17	59	3	65
TMR_00686	tmRNA links to Rfam database...	0.45	0.45	0.44	49	71142	74	14	48	12	59
TMR_00687	tmRNA links to Rfam database...	0.35	0.35	0.35	39	71521	81	6	65	10	72
TMR_00696	tmRNA links to Rfam database...	0.12	0.12	0.11	14	84955	125	19	90	16	100
TMR_00698	tmRNA links to Rfam database...	0.37	0.39	0.35	41	63074	75	21	54	0	63
TMR_00699	tmRNA links to Rfam database...	0.41	0.41	0.41	42	67059	63	10	50	3	60
TMR_00702	tmRNA links to Rfam database...	0.28	0.29	0.28	29	67057	80	18	57	5	71
TMR_00703	tmRNA links to Rfam database...	0.31	0.31	0.31	31	67427	74	16	54	4	68
TMR_00706	tmRNA links to Rfam database...	0.53	0.52	0.53	54	66328	52	6	42	4	49
TMR_00711	tmRNA links to Rfam database...	0.55	0.55	0.56	54	67799	50	13	30	7	44
TMR_00712	tmRNA links to Rfam database...	0.40	0.41	0.39	45	78490	73	19	52	2	64
TMR_00716	tmRNA links to Rfam database...	0.18	0.19	0.17	19	62725	91	17	74	0	81

^top

Matthews Correlation Coeffient, Sensitivity and Positive Predictive Value have been calculated based on the paper by Gardener & Giegerich, 2004.

Table of contents:

Overview

Performance plots

Performance of CentroidFold - scored higher in this pairwise comparison

1. Total counts & total scores for CentroidFold

2. Individual counts for CentroidFold [ download as .csv ]

Performance of PknotsRG - scored lower in this pairwise comparison

1. Total counts & total scores for PknotsRG

2. Individual counts for PknotsRG [ download as .csv ]