CompaRNA - on-line benchmarks of RNA structure prediction methods

Laboratory of Structural Bioinformatics @ Adam Mickiewicz University in Poznan

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Overview

Metric	ContextFold		RNAfold
MCC	0.676	>	0.407
Average MCC ± 95% Confidence Intervals	0.686 ± 0.013	>	0.445 ± 0.012
Sensitivity	0.634	>	0.408
Positive Predictive Value	0.722	>	0.406
Total TP	110136	>	70922
Total TN	433157387	>	433135283
Total FP	57865	<	123968
Total FP CONTRA	7730	<	17492
Total FP INCONS	34755	<	86311
Total FP COMP	15380	<	20165
Total FN	63512	<	102726
P-value	3.56938820447e-08

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Performance plots

Comparison of performance of ContextFold and RNAfold. Positive Predictive Value (PPV) is plotted against sensitivity. Each dot represents a single test of each method. See tables below for raw data (individual counts for ContextFold and RNAfold).
Average Matthews Correlation Coefficients (MCC) with 95% confidence intervals (CIs) were plotted for different RNA families, for which at least 3 members were present in the benchmarking dataset. 'n' denotes the number of MCCs used to calculate the average and CI. See tables below for raw data (individual counts for ContextFold and RNAfold).
Comparison of average Matthews Correlation Coefficients (MCCs) for ContextFold and RNAfold. The whiskers correspond to 95% confidence intervals (CIs). 'n' denotes the number of MCCs used to calculate average MCCs and CIs. See tables below for raw data (individual counts for ContextFold and RNAfold).

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Performance of ContextFold - scored higher in this pairwise comparison

1. Total counts & total scores for ContextFold

Total Base Pair Counts
Total TP	110136
Total TN	433157387
Total FP	57865
Total FP CONTRA	7730
Total FP INCONS	34755
Total FP COMP	15380
Total FN	63512

Total Scores
MCC	0.676
Average MCC ± 95% Confidence Intervals	0.686 ± 0.013
Sensitivity	0.634
Positive Predictive Value	0.722
Nr of predictions	910

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2. Individual counts for ContextFold [ download as .csv ]

RNA Chain	Rfam family	MCC	SENS	PPV	TP	TN	FP	FP CONTRA	FP INCONS	FP COMP	FN
ASE_00001	RNaseP_arch links to Rfam database...	0.88	0.83	0.94	62	34125	7	0	4	3	13
ASE_00002	RNaseP_arch links to Rfam database...	0.64	0.60	0.69	44	35447	25	4	16	5	29
ASE_00004	RNaseP_bact_a links to Rfam database...	0.88	0.86	0.90	83	47803	9	1	8	0	14
ASE_00005	RNaseP_bact_a links to Rfam database...	0.91	0.85	0.98	99	57869	2	0	2	0	18
ASE_00006	RNaseP_bact_a links to Rfam database...	0.89	0.87	0.90	81	47496	9	1	8	0	12
ASE_00007	RNaseP_bact_a links to Rfam database...	0.91	0.86	0.97	95	59587	3	0	3	0	15
ASE_00009	RNaseP_arch links to Rfam database...	0.84	0.79	0.90	53	26047	6	0	6	0	14
ASE_00012	RNaseP_bact_a links to Rfam database...	0.69	0.63	0.75	78	73816	29	3	23	3	45
ASE_00014	RNaseP_arch links to Rfam database...	0.70	0.65	0.75	69	54193	26	1	22	3	37
ASE_00017	RNaseP_nuc links to Rfam database...	0.13	0.13	0.13	8	50979	71	12	41	18	56
ASE_00018	RNaseP_bact_a links to Rfam database...	0.88	0.84	0.93	112	80480	9	0	9	0	22
ASE_00020	RNaseP_bact_a links to Rfam database...	0.76	0.71	0.81	89	73810	21	1	20	0	37
ASE_00021	RNaseP_bact_a links to Rfam database...	0.87	0.79	0.95	126	104064	10	0	6	4	34
ASE_00022	RNaseP_bact_b links to Rfam database...	0.89	0.80	1.00	99	82929	5	0	0	5	25
ASE_00023	RNaseP_bact_a links to Rfam database...	0.88	0.84	0.91	107	84138	13	0	10	3	20
ASE_00025	RNaseP_nuc links to Rfam database...	0.10	0.10	0.10	7	78537	101	11	51	39	64
ASE_00026	RNaseP_bact_a links to Rfam database...	0.80	0.72	0.90	79	59597	13	1	8	4	31
ASE_00028	RNaseP_bact_b links to Rfam database...	0.86	0.76	0.96	96	84566	8	1	3	4	30
ASE_00029	RNaseP_bact_a links to Rfam database...	0.88	0.84	0.93	102	82918	9	2	6	1	20
ASE_00030	RNaseP_bact_a links to Rfam database...	0.88	0.81	0.95	117	85368	6	2	4	0	28
ASE_00031	RNaseP_bact_a links to Rfam database...	0.95	0.90	1.00	114	86622	5	0	0	5	12
ASE_00032	RNaseP_bact_a links to Rfam database...	0.93	0.87	1.00	103	80097	3	0	0	3	15
ASE_00033	RNaseP_bact_a links to Rfam database...	0.77	0.67	0.88	81	64888	11	0	11	0	40
ASE_00035	RNaseP_bact_a links to Rfam database...	0.75	0.65	0.86	77	70410	15	1	12	2	41
ASE_00036	RNaseP_bact_a links to Rfam database...	0.83	0.74	0.92	98	75749	9	1	7	1	34
ASE_00037	RNaseP_bact_a links to Rfam database...	0.88	0.80	0.98	88	59250	2	0	2	0	22
ASE_00038	RNaseP_bact_a links to Rfam database...	0.94	0.89	1.00	90	53538	0	0	0	0	11
ASE_00040	RNaseP_bact_a links to Rfam database...	0.88	0.81	0.96	108	78891	7	0	4	3	25
ASE_00041	RNaseP_bact_a links to Rfam database...	0.88	0.81	0.97	87	57540	5	0	3	2	21
ASE_00042	RNaseP_bact_a links to Rfam database...	0.82	0.74	0.91	108	89981	14	1	10	3	37
ASE_00044	RNaseP_bact_a links to Rfam database...	0.92	0.87	0.97	91	54521	6	0	3	3	14
ASE_00046	RNaseP_bact_a links to Rfam database...	0.81	0.69	0.96	71	50329	3	0	3	0	32
ASE_00047	RNaseP_bact_a links to Rfam database...	0.77	0.72	0.84	93	74194	18	0	18	0	37
ASE_00052	RNaseP_bact_a links to Rfam database...	0.71	0.61	0.83	68	61343	15	0	14	1	44
ASE_00053	RNaseP_bact_a links to Rfam database...	0.88	0.82	0.94	109	79285	7	4	3	0	24
ASE_00056	-	0.92	0.85	1.00	61	30815	9	0	0	9	11
ASE_00057	RNaseP_bact_a links to Rfam database...	0.79	0.75	0.85	100	82097	20	5	13	2	34
ASE_00064	RNaseP_bact_a links to Rfam database...	0.95	0.91	1.00	81	45370	1	0	0	1	8
ASE_00066	RNaseP_bact_a links to Rfam database...	0.87	0.79	0.95	103	72282	5	0	5	0	27
ASE_00068	RNaseP_bact_a links to Rfam database...	0.82	0.75	0.90	64	37604	7	0	7	0	21
ASE_00069	RNaseP_bact_a links to Rfam database...	0.91	0.84	0.99	117	82910	2	0	1	1	23
ASE_00074	RNaseP_bact_a links to Rfam database...	0.95	0.90	1.00	107	67789	0	0	0	0	12
ASE_00075	RNaseP_bact_a links to Rfam database...	0.83	0.74	0.94	120	108683	12	1	7	4	42
ASE_00076	RNaseP_bact_a links to Rfam database...	0.83	0.78	0.89	92	68162	11	0	11	0	26
ASE_00077	RNaseP_bact_a links to Rfam database...	0.88	0.84	0.94	72	45073	5	1	4	0	14
ASE_00078	RNaseP_bact_a links to Rfam database...	0.88	0.88	0.89	73	42989	10	3	6	1	10
ASE_00079	RNaseP_bact_a links to Rfam database...	0.72	0.68	0.76	68	55522	21	2	19	0	32
ASE_00080	RNaseP_bact_a links to Rfam database...	0.79	0.74	0.84	91	71523	21	0	17	4	32
ASE_00081	RNaseP_bact_a links to Rfam database...	0.92	0.86	1.00	83	49687	0	0	0	0	14
ASE_00082	RNaseP_bact_a links to Rfam database...	0.93	0.86	1.00	100	70400	8	0	0	8	16
ASE_00083	RNaseP_bact_a links to Rfam database...	0.80	0.77	0.83	85	62379	20	0	17	3	25
ASE_00084	RNaseP_bact_a links to Rfam database...	0.93	0.89	0.97	88	53537	3	1	2	0	11
ASE_00087	RNaseP_bact_a links to Rfam database...	0.89	0.81	0.98	116	88292	2	0	2	0	28
ASE_00089	-	0.80	0.73	0.87	58	31308	9	1	8	0	21
ASE_00090	RNaseP_bact_a links to Rfam database...	0.84	0.83	0.86	84	55513	14	1	13	0	17
ASE_00092	RNaseP_bact_a links to Rfam database...	0.94	0.91	0.97	103	63440	3	1	2	0	10
ASE_00096	RNaseP_bact_a links to Rfam database...	0.79	0.74	0.85	85	63446	15	0	15	0	30
ASE_00099	RNaseP_bact_a links to Rfam database...	0.92	0.85	1.00	102	64518	0	0	0	0	18
ASE_00100	RNaseP_nuc links to Rfam database...	0.25	0.25	0.25	19	82140	97	12	44	41	57
ASE_00102	RNaseP_bact_a links to Rfam database...	0.87	0.79	0.95	131	117717	9	1	6	2	35
ASE_00104	RNaseP_bact_a links to Rfam database...	0.92	0.85	1.00	101	64160	0	0	0	0	18
ASE_00105	RNaseP_bact_a links to Rfam database...	0.74	0.65	0.84	72	64175	14	0	14	0	39
ASE_00107	RNaseP_bact_a links to Rfam database...	0.93	0.87	1.00	111	73042	0	0	0	0	16
ASE_00108	RNaseP_nuc links to Rfam database...	0.23	0.27	0.20	17	46887	76	24	43	9	46
ASE_00111	RNaseP_nuc links to Rfam database...	0.00	0.00	0.00	0	50004	92	24	58	10	57
ASE_00112	RNaseP_bact_a links to Rfam database...	0.95	0.90	1.00	104	75362	3	0	0	3	12
ASE_00115	RNaseP_bact_a links to Rfam database...	0.96	0.93	0.99	94	54520	5	0	1	4	7
ASE_00116	RNaseP_arch links to Rfam database...	0.90	0.85	0.97	56	31568	2	0	2	0	10
ASE_00118	RNaseP_bact_a links to Rfam database...	0.80	0.76	0.85	78	60634	15	1	13	1	24
ASE_00119	RNaseP_bact_a links to Rfam database...	0.89	0.87	0.90	94	62731	10	1	9	0	14
ASE_00120	RNaseP_arch links to Rfam database...	0.82	0.73	0.92	69	46896	7	2	4	1	25
ASE_00121	RNaseP_arch links to Rfam database...	0.85	0.77	0.95	71	45075	5	2	2	1	21
ASE_00122	RNaseP_bact_a links to Rfam database...	0.92	0.86	0.97	76	43287	2	0	2	0	12
ASE_00123	RNaseP_bact_a links to Rfam database...	0.88	0.81	0.96	69	38431	3	0	3	0	16
ASE_00125	RNaseP_bact_a links to Rfam database...	0.92	0.86	0.99	76	39263	1	0	1	0	12
ASE_00126	RNaseP_bact_a links to Rfam database...	0.94	0.89	0.99	73	40396	1	0	1	0	9
ASE_00128	RNaseP_bact_a links to Rfam database...	0.93	0.86	1.00	86	53215	0	0	0	0	14
ASE_00129	RNaseP_bact_a links to Rfam database...	0.72	0.68	0.77	76	62736	23	1	22	0	35
ASE_00131	RNaseP_bact_a links to Rfam database...	0.90	0.82	0.99	70	39269	1	0	1	0	15
ASE_00132	RNaseP_bact_a links to Rfam database...	0.90	0.82	0.99	78	50324	2	0	1	1	17
ASE_00134	RNaseP_bact_a links to Rfam database...	0.92	0.89	0.96	85	50314	4	0	4	0	10
ASE_00135	RNaseP_bact_a links to Rfam database...	0.95	0.91	0.99	99	63090	6	0	1	5	10
ASE_00136	RNaseP_bact_a links to Rfam database...	0.95	0.91	0.99	84	48120	1	0	1	0	8
ASE_00137	RNaseP_bact_a links to Rfam database...	0.91	0.88	0.95	86	48425	5	1	4	0	12
ASE_00138	RNaseP_bact_a links to Rfam database...	0.93	0.89	0.97	72	40396	2	0	2	0	9
ASE_00139	RNaseP_bact_a links to Rfam database...	0.94	0.88	1.00	91	54194	1	0	0	1	13
ASE_00140	RNaseP_bact_a links to Rfam database...	0.91	0.84	0.98	105	70769	2	2	0	0	20
ASE_00142	RNaseP_bact_a links to Rfam database...	0.90	0.83	0.97	101	67057	5	0	3	2	21
ASE_00145	RNaseP_arch links to Rfam database...	0.80	0.78	0.81	87	70018	25	4	16	5	24
ASE_00146	RNaseP_bact_a links to Rfam database...	0.84	0.75	0.94	93	70777	7	1	5	1	31
ASE_00148	RNaseP_arch links to Rfam database...	0.85	0.80	0.90	123	112438	17	2	12	3	31
ASE_00151	RNaseP_bact_a links to Rfam database...	0.86	0.82	0.90	80	51914	9	6	3	0	18
ASE_00153	RNaseP_nuc links to Rfam database...	0.51	0.51	0.51	37	57558	68	6	29	33	36
ASE_00154	RNaseP_arch links to Rfam database...	0.69	0.66	0.72	71	65243	31	3	24	4	36
ASE_00155	RNaseP_arch links to Rfam database...	0.87	0.80	0.94	114	93407	12	0	7	5	28
ASE_00163	RNaseP_bact_a links to Rfam database...	0.85	0.84	0.87	78	53211	16	3	9	4	15
ASE_00165	RNaseP_bact_a links to Rfam database...	0.84	0.80	0.89	81	52884	11	3	7	1	20
ASE_00168	RNaseP_nuc links to Rfam database...	0.26	0.30	0.23	19	60645	73	16	46	11	45
ASE_00169	RNaseP_bact_a links to Rfam database...	0.85	0.79	0.91	85	57198	11	0	8	3	22
ASE_00170	RNaseP_bact_a links to Rfam database...	0.91	0.87	0.95	81	48743	6	0	4	2	12
ASE_00171	RNaseP_bact_a links to Rfam database...	0.86	0.79	0.95	74	48438	4	0	4	0	20
ASE_00172	RNaseP_bact_a links to Rfam database...	0.86	0.83	0.90	88	58898	11	2	8	1	18
ASE_00174	RNaseP_bact_a links to Rfam database...	0.91	0.85	0.97	93	60979	4	0	3	1	16
ASE_00175	RNaseP_bact_a links to Rfam database...	0.94	0.90	0.98	96	59933	3	0	2	1	11
ASE_00176	RNaseP_bact_a links to Rfam database...	0.64	0.56	0.73	62	59946	23	5	18	0	48
ASE_00179	RNaseP_bact_a links to Rfam database...	0.82	0.76	0.89	64	44181	8	4	4	0	20
ASE_00180	RNaseP_bact_a links to Rfam database...	0.93	0.87	1.00	87	51273	0	0	0	0	13
ASE_00181	RNaseP_bact_a links to Rfam database...	0.93	0.90	0.96	95	57531	4	0	4	0	11
ASE_00182	RNaseP_bact_a links to Rfam database...	0.91	0.85	0.97	116	84135	4	0	4	0	20
ASE_00183	RNaseP_bact_a links to Rfam database...	0.83	0.81	0.85	91	61318	17	0	16	1	22
ASE_00184	RNaseP_bact_a links to Rfam database...	0.96	0.93	0.99	95	54519	2	0	1	1	7
ASE_00185	RNaseP_bact_a links to Rfam database...	0.92	0.87	0.98	111	73423	2	0	2	0	17
ASE_00186	RNaseP_bact_a links to Rfam database...	0.89	0.86	0.93	113	78882	12	1	7	4	19
ASE_00187	RNaseP_arch links to Rfam database...	0.78	0.71	0.85	82	68539	16	2	12	2	33
ASE_00189	RNaseP_bact_b links to Rfam database...	0.91	0.87	0.96	89	63097	6	0	4	2	13
ASE_00190	RNaseP_bact_b links to Rfam database...	0.86	0.81	0.91	73	45371	8	0	7	1	17
ASE_00192	RNaseP_bact_b links to Rfam database...	0.73	0.62	0.86	82	84571	19	1	12	6	51
ASE_00194	RNaseP_bact_b links to Rfam database...	0.79	0.71	0.88	84	73440	17	2	10	5	35
ASE_00195	-	0.68	0.60	0.76	80	86215	28	5	20	3	53
ASE_00196	RNaseP_arch links to Rfam database...	0.78	0.75	0.82	56	31558	14	2	10	2	19
ASE_00197	RNaseP_bact_a links to Rfam database...	0.77	0.73	0.82	106	89123	27	0	24	3	39
ASE_00198	RNaseP_bact_a links to Rfam database...	0.95	0.90	1.00	92	52558	0	0	0	0	10
ASE_00203	RNaseP_bact_a links to Rfam database...	0.94	0.90	0.99	86	46578	1	1	0	0	10
ASE_00204	RNaseP_bact_b links to Rfam database...	0.84	0.72	0.98	81	67813	8	0	2	6	31
ASE_00205	RNaseP_arch links to Rfam database...	0.64	0.61	0.68	55	45975	32	1	25	6	35
ASE_00209	RNaseP_arch links to Rfam database...	0.59	0.55	0.63	48	42995	28	1	27	0	40
ASE_00210	RNaseP_arch links to Rfam database...	0.70	0.69	0.71	45	27198	20	3	15	2	20
ASE_00212	RNaseP_bact_a links to Rfam database...	0.86	0.82	0.90	122	93826	16	1	12	3	26
ASE_00213	RNaseP_arch links to Rfam database...	0.87	0.82	0.93	54	27203	6	0	4	2	12
ASE_00214	RNaseP_bact_a links to Rfam database...	0.95	0.91	0.99	94	56185	6	0	1	5	9
ASE_00215	RNaseP_bact_a links to Rfam database...	0.92	0.85	1.00	84	48432	1	0	0	1	15
ASE_00216	RNaseP_bact_a links to Rfam database...	0.91	0.88	0.94	72	39263	5	3	2	0	10
ASE_00217	RNaseP_bact_a links to Rfam database...	0.83	0.74	0.93	67	40398	10	0	5	5	23
ASE_00221	RNaseP_bact_a links to Rfam database...	0.76	0.68	0.84	80	64525	15	1	14	0	37
ASE_00222	RNaseP_arch links to Rfam database...	0.75	0.69	0.82	108	111969	27	2	22	3	49
ASE_00227	RNaseP_bact_a links to Rfam database...	0.62	0.54	0.71	72	78902	29	2	27	0	61
ASE_00228	RNaseP_bact_a links to Rfam database...	0.85	0.83	0.87	71	46889	12	3	8	1	15
ASE_00229	RNaseP_bact_a links to Rfam database...	0.91	0.87	0.94	76	42405	5	1	4	0	11
ASE_00231	RNaseP_bact_a links to Rfam database...	0.94	0.92	0.97	88	47804	3	1	2	0	8
ASE_00232	RNaseP_bact_a links to Rfam database...	0.96	0.93	1.00	78	38425	0	0	0	0	6
ASE_00234	RNaseP_bact_a links to Rfam database...	0.78	0.73	0.83	94	75353	19	1	18	0	35
ASE_00237	RNaseP_nuc links to Rfam database...	0.08	0.09	0.07	5	45683	76	18	47	11	51
ASE_00238	RNaseP_bact_a links to Rfam database...	0.94	0.90	0.98	103	64156	2	1	1	0	11
ASE_00240	RNaseP_bact_a links to Rfam database...	0.77	0.73	0.81	68	46581	18	0	16	2	25
ASE_00241	RNaseP_bact_a links to Rfam database...	0.96	0.93	0.99	81	43874	1	0	1	0	6
ASE_00242	RNaseP_bact_a links to Rfam database...	0.92	0.89	0.95	100	60970	5	3	2	0	12
ASE_00246	RNaseP_nuc links to Rfam database...	0.14	0.15	0.13	10	48129	75	18	48	9	57
ASE_00247	RNaseP_nuc links to Rfam database...	0.06	0.06	0.07	4	54226	84	7	48	29	60
ASE_00248	RNaseP_bact_a links to Rfam database...	0.93	0.87	0.99	99	62381	1	0	1	0	15
ASE_00250	RNaseP_bact_a links to Rfam database...	0.88	0.80	0.96	105	78894	7	0	4	3	26
ASE_00252	RNaseP_bact_a links to Rfam database...	0.77	0.68	0.88	115	115309	20	0	16	4	53
ASE_00254	RNaseP_bact_a links to Rfam database...	0.90	0.85	0.95	70	36782	4	0	4	0	12
ASE_00255	RNaseP_bact_a links to Rfam database...	0.81	0.75	0.89	97	74582	12	1	11	0	33
ASE_00257	RNaseP_bact_a links to Rfam database...	0.96	0.93	1.00	90	50950	0	0	0	0	7
ASE_00259	RNaseP_bact_a links to Rfam database...	0.63	0.54	0.75	65	73066	22	2	20	0	56
ASE_00263	RNaseP_bact_a links to Rfam database...	0.88	0.85	0.92	102	70389	9	0	9	0	18
ASE_00264	RNaseP_nuc links to Rfam database...	0.87	0.82	0.93	82	49053	12	0	6	6	18
ASE_00267	RNaseP_bact_a links to Rfam database...	0.96	0.92	1.00	81	45069	2	0	0	2	7
ASE_00270	RNaseP_bact_a links to Rfam database...	0.91	0.86	0.96	110	72275	5	1	4	0	18
ASE_00274	RNaseP_bact_a links to Rfam database...	0.89	0.83	0.96	86	55521	4	1	3	0	17
ASE_00277	RNaseP_bact_a links to Rfam database...	0.81	0.78	0.85	71	48121	13	1	12	0	20
ASE_00279	RNaseP_bact_a links to Rfam database...	0.92	0.86	0.98	87	53212	2	0	2	0	14
ASE_00280	RNaseP_bact_a links to Rfam database...	0.86	0.82	0.90	80	51914	9	0	9	0	18
ASE_00281	RNaseP_bact_a links to Rfam database...	0.95	0.91	1.00	80	44471	0	0	0	0	8
ASE_00282	RNaseP_bact_a links to Rfam database...	0.88	0.83	0.95	105	77704	10	0	6	4	22
ASE_00283	RNaseP_bact_a links to Rfam database...	0.90	0.86	0.95	92	61679	5	0	5	0	15
ASE_00284	RNaseP_bact_a links to Rfam database...	0.95	0.91	1.00	98	58213	0	0	0	0	10
ASE_00285	RNaseP_bact_a links to Rfam database...	0.86	0.80	0.92	97	68901	8	0	8	0	25
ASE_00286	RNaseP_bact_a links to Rfam database...	0.88	0.85	0.92	78	46580	10	0	7	3	14
ASE_00287	RNaseP_bact_a links to Rfam database...	0.93	0.86	1.00	89	54857	0	0	0	0	14
ASE_00288	RNaseP_bact_a links to Rfam database...	0.78	0.68	0.90	63	45986	7	2	5	0	30
ASE_00289	RNaseP_bact_a links to Rfam database...	0.89	0.81	0.98	127	100895	5	1	2	2	30
ASE_00291	-	0.81	0.71	0.92	67	48443	8	0	6	2	27
ASE_00292	RNaseP_bact_a links to Rfam database...	0.71	0.66	0.76	91	81690	29	0	29	0	47
ASE_00294	RNaseP_bact_a links to Rfam database...	0.90	0.83	0.97	142	114334	8	0	5	3	29
ASE_00295	RNaseP_bact_a links to Rfam database...	0.85	0.76	0.96	99	73817	4	0	4	0	32
ASE_00296	RNaseP_bact_a links to Rfam database...	0.84	0.79	0.90	115	91678	13	1	12	0	30
ASE_00297	RNaseP_bact_a links to Rfam database...	0.87	0.84	0.90	82	52884	10	1	8	1	16
ASE_00298	RNaseP_bact_a links to Rfam database...	0.72	0.68	0.76	77	67427	24	2	22	0	36
ASE_00299	RNaseP_bact_a links to Rfam database...	0.76	0.71	0.82	71	49368	20	0	16	4	29
ASE_00313	RNaseP_nuc links to Rfam database...	0.62	0.60	0.65	53	62399	41	10	19	12	36
ASE_00316	RNaseP_nuc links to Rfam database...	0.89	0.80	0.99	78	107801	35	1	0	34	20
ASE_00318	RNaseP_bact_b links to Rfam database...	0.76	0.68	0.86	80	80107	19	0	13	6	38
ASE_00327	RNaseP_nuc links to Rfam database...	0.87	0.80	0.96	71	57217	21	2	1	18	18
ASE_00328	RNaseP_bact_b links to Rfam database...	0.91	0.86	0.97	96	72672	9	0	3	6	16
ASE_00330	RNaseP_nuc links to Rfam database...	0.83	0.79	0.88	71	56199	23	0	10	13	19
ASE_00332	RNaseP_bact_a links to Rfam database...	0.65	0.62	0.69	85	81687	39	2	36	1	53
ASE_00335	RNaseP_bact_b links to Rfam database...	0.82	0.74	0.91	86	75372	13	0	8	5	30
ASE_00337	RNaseP_nuc links to Rfam database...	0.59	0.56	0.63	40	39276	35	5	19	11	31
ASE_00338	RNaseP_nuc links to Rfam database...	0.76	0.71	0.81	70	66344	31	2	14	15	28
ASE_00339	RNaseP_bact_a links to Rfam database...	0.95	0.91	1.00	108	80092	7	0	0	7	11
ASE_00340	RNaseP_bact_a links to Rfam database...	0.79	0.75	0.82	64	45978	17	2	12	3	21
ASE_00342	RNaseP_bact_a links to Rfam database...	0.91	0.86	0.96	99	62378	4	0	4	0	16
ASE_00343	RNaseP_bact_a links to Rfam database...	0.89	0.83	0.95	94	83337	12	0	5	7	19
ASE_00346	RNaseP_arch links to Rfam database...	0.61	0.58	0.64	56	48118	32	2	29	1	41
ASE_00353	RNaseP_bact_a links to Rfam database...	0.95	0.92	0.99	98	57871	1	1	0	0	9
ASE_00359	RNaseP_arch links to Rfam database...	0.73	0.69	0.79	55	42708	17	2	13	2	25
ASE_00360	RNaseP_arch links to Rfam database...	0.73	0.65	0.82	42	29352	9	0	9	0	23
ASE_00361	RNaseP_bact_a links to Rfam database...	0.94	0.88	1.00	112	75354	2	0	0	2	15
ASE_00362	RNaseP_bact_a links to Rfam database...	0.88	0.86	0.90	78	48118	9	2	7	0	13
ASE_00363	RNaseP_bact_a links to Rfam database...	0.95	0.91	0.98	86	51272	3	0	2	1	8
ASE_00364	RNaseP_bact_a links to Rfam database...	0.90	0.86	0.95	90	54190	5	0	5	0	15
ASE_00366	RNaseP_bact_a links to Rfam database...	0.79	0.77	0.81	75	58560	18	3	15	0	23
ASE_00367	RNaseP_bact_a links to Rfam database...	0.90	0.84	0.96	72	42996	7	0	3	4	14
ASE_00369	RNaseP_bact_a links to Rfam database...	0.96	0.93	1.00	99	55846	1	0	0	1	8
ASE_00370	RNaseP_bact_a links to Rfam database...	0.94	0.90	0.99	76	41828	1	0	1	0	8
ASE_00372	RNaseP_bact_a links to Rfam database...	0.84	0.81	0.88	81	51911	12	1	10	1	19
ASE_00374	RNaseP_bact_a links to Rfam database...	0.88	0.88	0.90	77	44764	9	2	7	0	11
ASE_00375	RNaseP_bact_a links to Rfam database...	0.94	0.88	1.00	97	60281	0	0	0	0	13
ASE_00376	RNaseP_bact_a links to Rfam database...	0.88	0.85	0.92	89	56856	8	0	8	0	16
ASE_00377	RNaseP_bact_a links to Rfam database...	0.95	0.93	0.98	99	57529	2	0	2	0	8
ASE_00379	RNaseP_bact_a links to Rfam database...	0.90	0.87	0.94	77	45974	7	0	5	2	12
ASE_00380	RNaseP_bact_a links to Rfam database...	0.92	0.84	1.00	83	54863	0	0	0	0	16
ASE_00382	RNaseP_bact_a links to Rfam database...	0.96	0.93	0.99	78	41826	1	0	1	0	6
ASE_00383	RNaseP_bact_a links to Rfam database...	0.93	0.87	1.00	91	54524	0	0	0	0	14
ASE_00384	RNaseP_bact_a links to Rfam database...	0.95	0.90	1.00	83	48433	0	0	0	0	9
ASE_00385	RNaseP_bact_a links to Rfam database...	0.79	0.75	0.82	61	41831	13	7	6	0	20
ASE_00386	RNaseP_bact_a links to Rfam database...	0.85	0.81	0.90	78	50316	10	5	4	1	18
ASE_00387	RNaseP_bact_a links to Rfam database...	0.89	0.86	0.93	89	55849	7	0	7	0	15
ASE_00388	RNaseP_bact_a links to Rfam database...	0.94	0.89	1.00	79	45674	0	0	0	0	10
ASE_00390	RNaseP_bact_a links to Rfam database...	0.93	0.89	0.97	76	42117	8	0	2	6	9
ASE_00393	RNaseP_bact_a links to Rfam database...	0.89	0.84	0.94	78	47812	5	0	5	0	15
ASE_00394	RNaseP_bact_a links to Rfam database...	0.96	0.91	1.00	85	46886	0	0	0	0	8
ASE_00395	RNaseP_bact_a links to Rfam database...	0.98	0.95	1.00	80	41536	2	0	0	2	4
ASE_00396	RNaseP_bact_a links to Rfam database...	0.91	0.88	0.95	73	41539	4	0	4	0	10
ASE_00397	RNaseP_bact_a links to Rfam database...	0.94	0.89	0.99	93	54521	1	1	0	0	12
ASE_00398	RNaseP_bact_a links to Rfam database...	0.72	0.65	0.80	68	55860	17	0	17	0	36
ASE_00400	RNaseP_bact_a links to Rfam database...	0.85	0.79	0.91	84	57878	8	0	8	0	22
ASE_00401	RNaseP_bact_a links to Rfam database...	0.85	0.81	0.90	102	76915	11	0	11	0	24
ASE_00402	RNaseP_bact_a links to Rfam database...	0.90	0.87	0.94	74	42407	5	0	5	0	11
ASE_00403	RNaseP_bact_a links to Rfam database...	0.85	0.79	0.90	85	55851	9	0	9	0	22
ASE_00404	RNaseP_bact_a links to Rfam database...	0.90	0.86	0.95	73	42994	7	0	4	3	12
ASE_00406	RNaseP_bact_a links to Rfam database...	0.97	0.94	1.00	88	48740	2	0	0	2	6
ASE_00408	-	0.95	0.93	0.97	66	32317	6	2	0	4	5
ASE_00409	-	0.79	0.76	0.83	63	40965	13	2	11	0	20
ASE_00411	RNaseP_bact_a links to Rfam database...	0.82	0.81	0.83	72	49368	15	5	10	0	17
ASE_00412	RNaseP_bact_a links to Rfam database...	0.87	0.81	0.94	85	58221	5	0	5	0	20
ASE_00413	RNaseP_bact_a links to Rfam database...	0.90	0.90	0.90	73	44470	11	5	3	3	8
ASE_00414	RNaseP_bact_a links to Rfam database...	0.79	0.72	0.88	68	46283	15	0	9	6	27
ASE_00415	RNaseP_bact_a links to Rfam database...	0.89	0.85	0.93	88	54851	7	0	7	0	15
ASE_00416	RNaseP_bact_a links to Rfam database...	0.92	0.88	0.96	112	77304	8	1	4	3	15
ASE_00417	RNaseP_arch links to Rfam database...	0.83	0.76	0.90	76	54531	11	0	8	3	24
ASE_00418	RNaseP_arch links to Rfam database...	0.84	0.77	0.91	58	38717	9	0	6	3	17
ASE_00419	RNaseP_bact_a links to Rfam database...	0.96	0.93	0.98	96	54848	3	1	1	1	7
ASE_00422	RNaseP_bact_a links to Rfam database...	0.92	0.88	0.97	83	46885	9	0	3	6	11
ASE_00423	RNaseP_bact_a links to Rfam database...	0.92	0.87	0.97	95	56855	4	2	1	1	14
ASE_00426	RNaseP_bact_a links to Rfam database...	0.77	0.71	0.84	77	60983	15	1	14	0	31
ASE_00428	RNaseP_bact_a links to Rfam database...	0.87	0.82	0.92	102	76525	10	1	8	1	23
ASE_00429	-	0.94	0.88	1.00	58	28145	3	0	0	3	8
ASE_00430	RNaseP_bact_a links to Rfam database...	0.95	0.91	1.00	88	46883	3	0	0	3	9
ASE_00431	RNaseP_bact_a links to Rfam database...	0.85	0.75	0.97	71	46287	9	0	2	7	24
ASE_00434	RNaseP_bact_b links to Rfam database...	0.79	0.75	0.84	82	68167	26	3	13	10	28
ASE_00437	RNaseP_bact_a links to Rfam database...	0.75	0.67	0.83	91	79292	18	0	18	0	44
ASE_00438	RNaseP_bact_a links to Rfam database...	0.87	0.84	0.91	97	65959	10	0	10	0	19
ASE_00441	RNaseP_bact_a links to Rfam database...	0.93	0.87	0.99	97	64163	4	0	1	3	15
ASE_00447	RNaseP_bact_a links to Rfam database...	0.77	0.68	0.88	79	60288	11	0	11	0	37
ASE_00448	RNaseP_bact_a links to Rfam database...	0.91	0.85	0.97	95	64163	8	0	3	5	17
ASE_00451	RNaseP_bact_a links to Rfam database...	0.91	0.85	0.97	106	70767	3	1	2	0	19
CRW_00001	-	0.34	0.30	0.39	63	3173779	531	14	84	433	146
CRW_00002	-	0.59	0.52	0.69	136	408862	102	9	53	40	128
CRW_00004	-	0.77	0.79	0.76	103	154155	50	15	17	18	28
CRW_00005	-	0.85	0.83	0.86	110	137947	38	4	14	20	22
CRW_00007	-	0.39	0.41	0.38	54	144849	88	25	63	0	79
CRW_00009	-	0.64	0.64	0.63	89	137933	67	8	45	14	49
CRW_00010	-	0.79	0.78	0.80	98	102708	30	8	17	5	28
CRW_00011	-	0.93	0.91	0.96	125	118211	18	0	5	13	13
CRW_00012	-	0.30	0.30	0.29	43	147005	107	19	86	2	98
CRW_00013	Intron_gpI links to Rfam database...	0.67	0.60	0.76	69	103649	34	4	18	12	46
CRW_00014	-	0.73	0.72	0.74	88	103621	38	7	24	7	35
CRW_00016	Intron_gpI links to Rfam database...	0.81	0.73	0.92	87	77326	14	3	5	6	33
CRW_00017	-	0.63	0.65	0.61	59	92138	55	4	34	17	32
CRW_00018	-	0.45	0.49	0.42	59	182571	94	40	40	14	62
CRW_00019	-	0.87	0.84	0.91	115	127638	26	4	8	14	22
CRW_00024	SSU_rRNA_archaea links to Rfam database...	0.95	0.92	0.98	423	1085170	15	3	5	7	35
CRW_00034	SSU_rRNA_bacteria links to Rfam database...	0.91	0.89	0.93	421	1141864	43	16	15	12	53
CRW_00048	SSU_rRNA_bacteria links to Rfam database...	0.94	0.90	0.98	421	1170787	8	3	4	1	49
CRW_00054	SSU_rRNA_bacteria links to Rfam database...	0.94	0.90	0.97	412	1107393	12	2	9	1	44
CRW_00059	SSU_rRNA_bacteria links to Rfam database...	0.91	0.88	0.95	416	1172309	22	2	19	1	57
CRW_00061	SSU_rRNA_bacteria links to Rfam database...	0.94	0.90	0.97	429	1181511	14	7	6	1	47
CRW_00068	SSU_rRNA_bacteria links to Rfam database...	0.95	0.92	0.99	421	1108878	11	2	4	5	36
CRW_00096	SSU_rRNA_bacteria links to Rfam database...	0.96	0.92	0.99	430	1178445	8	0	5	3	35
CRW_00140	SSU_rRNA_bacteria links to Rfam database...	0.93	0.90	0.97	415	1135850	16	2	11	3	48
CRW_00141	SSU_rRNA_bacteria links to Rfam database...	0.93	0.89	0.97	426	1201584	22	4	11	7	50
CRW_00150	SSU_rRNA_bacteria links to Rfam database...	0.85	0.81	0.90	376	1152502	48	6	37	5	90
CRW_00152	SSU_rRNA_bacteria links to Rfam database...	0.91	0.87	0.95	412	1179984	23	8	12	3	59
CRW_00166	SSU_rRNA_bacteria links to Rfam database...	0.95	0.91	0.99	427	1190763	11	0	6	5	41
CRW_00173	SSU_rRNA_bacteria links to Rfam database...	0.78	0.71	0.85	318	1082280	60	6	52	2	127
CRW_00177	SSU_rRNA_bacteria links to Rfam database...	0.92	0.88	0.97	417	1178448	25	2	13	10	56
CRW_00196	SSU_rRNA_bacteria links to Rfam database...	0.94	0.89	1.00	424	1207810	4	1	0	3	51
CRW_00230	SSU_rRNA_bacteria links to Rfam database...	0.94	0.90	0.97	431	1198483	18	4	8	6	47
CRW_00245	SSU_rRNA_bacteria links to Rfam database...	0.93	0.89	0.97	404	1105911	13	2	11	0	49
CRW_00248	SSU_rRNA_bacteria links to Rfam database...	0.92	0.89	0.96	433	1218688	25	3	17	5	51
CRW_00250	SSU_rRNA_bacteria links to Rfam database...	0.94	0.91	0.98	435	1198481	12	4	6	2	43
CRW_00256	SSU_rRNA_bacteria links to Rfam database...	0.86	0.80	0.91	376	1192327	51	4	33	14	92
CRW_00270	SSU_rRNA_bacteria links to Rfam database...	0.91	0.86	0.95	391	1111876	31	0	19	12	64
CRW_00271	SSU_rRNA_bacteria links to Rfam database...	0.92	0.88	0.98	405	1122336	12	2	8	2	57
CRW_00273	SSU_rRNA_bacteria links to Rfam database...	0.91	0.86	0.97	383	1085207	14	1	10	3	63
CRW_00275	SSU_rRNA_bacteria links to Rfam database...	0.94	0.90	0.98	412	1114849	15	3	7	5	45
CRW_00277	SSU_rRNA_bacteria links to Rfam database...	0.83	0.79	0.87	359	1110384	57	9	43	5	94
CRW_00278	SSU_rRNA_bacteria links to Rfam database...	0.77	0.70	0.84	316	1129880	68	9	51	8	134
CRW_00279	SSU_rRNA_bacteria links to Rfam database...	0.89	0.84	0.94	389	1180004	36	4	19	13	75
CRW_00280	SSU_rRNA_bacteria links to Rfam database...	0.92	0.88	0.95	398	1117843	21	4	15	2	55
CRW_00281	SSU_rRNA_bacteria links to Rfam database...	0.92	0.87	0.96	405	1144919	21	2	15	4	59
CRW_00283	SSU_rRNA_bacteria links to Rfam database...	0.75	0.69	0.81	298	1015659	88	12	56	20	134
CRW_00284	SSU_rRNA_bacteria links to Rfam database...	0.85	0.80	0.89	365	1131352	48	0	43	5	91
CRW_00285	SSU_rRNA_bacteria links to Rfam database...	0.95	0.91	0.99	416	1117839	7	2	3	2	42
CRW_00289	SSU_rRNA_bacteria links to Rfam database...	0.85	0.80	0.90	382	1189229	44	4	38	2	94
CRW_00292	SSU_rRNA_bacteria links to Rfam database...	0.76	0.70	0.81	325	1123851	81	12	62	7	136
CRW_00294	-	0.45	0.44	0.47	255	2620362	377	49	239	89	331
CRW_00298	SSU_rRNA_eukarya links to Rfam database...	0.38	0.35	0.41	173	1620475	275	37	215	23	321
CRW_00301	SSU_rRNA_eukarya links to Rfam database...	0.51	0.47	0.55	245	1762058	245	26	174	45	274
CRW_00306	SSU_rRNA_eukarya links to Rfam database...	0.37	0.36	0.37	168	1445399	304	63	220	21	294
CRW_00310	SSU_rRNA_eukarya links to Rfam database...	0.49	0.47	0.52	243	1805487	271	31	189	51	278
CRW_00326	SSU_rRNA_eukarya links to Rfam database...	0.58	0.54	0.63	271	1627677	194	30	132	32	231
CRW_00330	SSU_rRNA_eukarya links to Rfam database...	0.47	0.45	0.49	232	1988538	308	45	200	63	285
CRW_00332	SSU_rRNA_eukarya links to Rfam database...	0.50	0.46	0.54	218	1769618	245	34	151	60	259
CRW_00333	SSU_rRNA_eukarya links to Rfam database...	0.36	0.33	0.40	171	1892055	315	40	219	56	343
CRW_00338	-	0.25	0.26	0.25	102	1053015	324	55	254	15	293
CRW_00345	SSU_rRNA_eukarya links to Rfam database...	0.39	0.38	0.41	187	1586412	289	48	224	17	311
CRW_00346	SSU_rRNA_eukarya links to Rfam database...	0.36	0.34	0.38	172	1584635	308	55	228	25	329
CRW_00348	SSU_rRNA_eukarya links to Rfam database...	0.46	0.44	0.49	219	1615055	262	39	190	33	284
CRW_00358	SSU_rRNA_eukarya links to Rfam database...	0.46	0.45	0.47	227	1674887	268	53	198	17	280
CRW_00366	SSU_rRNA_eukarya links to Rfam database...	0.45	0.42	0.48	202	1579334	251	36	181	34	280
CRW_00370	SSU_rRNA_eukarya links to Rfam database...	0.37	0.35	0.39	176	1640316	302	35	239	28	330
CRW_00371	SSU_rRNA_eukarya links to Rfam database...	0.56	0.53	0.58	263	1611460	230	33	154	43	233
CRW_00372	SSU_rRNA_eukarya links to Rfam database...	0.47	0.45	0.49	225	1625846	264	44	191	29	273
CRW_00374	-	0.44	0.41	0.48	227	2182530	324	37	211	76	323
CRW_00375	-	0.57	0.53	0.60	288	2298961	281	32	159	90	253
CRW_00379	SSU_rRNA_eukarya links to Rfam database...	0.62	0.59	0.65	314	2126472	237	36	131	70	220
CRW_00381	-	0.56	0.54	0.59	299	2303227	281	32	173	76	258
CRW_00386	SSU_rRNA_eukarya links to Rfam database...	0.39	0.38	0.39	197	1750754	338	55	250	33	318
CRW_00400	-	0.37	0.35	0.38	173	2678002	446	54	226	166	321
CRW_00403	SSU_rRNA_eukarya links to Rfam database...	0.51	0.48	0.55	222	1606122	262	30	154	78	242
CRW_00411	SSU_rRNA_eukarya links to Rfam database...	0.55	0.52	0.59	257	1615067	222	34	145	43	239
CRW_00414	SSU_rRNA_eukarya links to Rfam database...	0.43	0.41	0.44	205	1665761	293	45	214	34	290
CRW_00417	-	0.87	0.80	0.95	209	458183	19	2	9	8	53
CRW_00418	-	0.66	0.58	0.75	152	441127	54	6	45	3	108
CRW_00419	-	0.78	0.70	0.88	186	463954	32	6	20	6	79
CRW_00421	-	0.77	0.71	0.84	188	462978	47	6	31	10	78
CRW_00422	-	0.90	0.81	0.99	214	455318	14	0	3	11	49
CRW_00423	-	0.15	0.14	0.17	27	242395	135	21	113	1	162
CRW_00424	-	0.69	0.63	0.77	228	789098	94	11	59	24	135
CRW_00426	-	0.88	0.81	0.97	214	457225	18	0	7	11	51
CRW_00427	-	0.80	0.74	0.88	192	454363	31	5	21	5	69
CRW_00428	-	0.80	0.71	0.89	185	465888	28	2	20	6	75
CRW_00429	-	0.47	0.42	0.52	97	306751	94	12	76	6	136
CRW_00430	-	0.76	0.71	0.83	188	456263	46	7	32	7	78
CRW_00433	-	0.83	0.73	0.94	192	467823	17	2	11	4	71
CRW_00434	-	0.87	0.77	0.97	203	457237	12	3	3	6	60
CRW_00435	-	0.60	0.51	0.69	136	451528	71	6	55	10	129
CRW_00437	-	0.85	0.77	0.94	199	456279	19	1	11	7	61
CRW_00438	-	0.75	0.66	0.84	178	454369	43	5	29	9	90
CRW_00441	-	0.84	0.76	0.93	198	454368	21	1	14	6	64
CRW_00442	-	0.76	0.68	0.84	178	453416	46	4	30	12	83
CRW_00443	-	0.61	0.53	0.70	138	456292	71	7	53	11	122
CRW_00444	-	0.89	0.81	0.98	214	459143	13	2	2	9	49
CRW_00445	-	0.86	0.76	0.97	202	458195	11	1	5	5	63
CRW_00446	-	0.86	0.79	0.93	209	468771	29	3	13	13	56
CRW_00447	-	0.61	0.58	0.66	150	452447	84	15	64	5	110
CRW_00448	-	0.86	0.76	0.97	198	457241	20	1	6	13	63
CRW_00449	-	0.83	0.76	0.91	197	444879	26	7	13	6	63
CRW_00450	-	0.76	0.68	0.84	178	458191	47	6	28	13	84
CRW_00451	-	0.84	0.76	0.92	201	457228	26	4	13	9	63
CRW_00452	-	0.88	0.79	0.98	208	453415	14	3	2	9	54
CRW_00453	-	0.75	0.66	0.86	172	452477	34	3	24	7	89
CRW_00454	-	0.37	0.35	0.40	151	1730350	328	43	186	99	284
CRW_00456	-	0.82	0.74	0.91	195	470720	26	2	18	6	70
CRW_00457	-	0.86	0.78	0.95	207	467811	23	3	7	13	57
CRW_00458	-	0.91	0.84	0.98	223	464902	16	2	3	11	41
CRW_00459	-	0.87	0.79	0.96	207	462025	19	0	9	10	56
CRW_00460	-	0.38	0.35	0.42	190	1972638	326	30	233	63	354
CRW_00462	-	0.79	0.70	0.88	183	458196	30	6	18	6	78
CRW_00463	-	0.75	0.69	0.82	176	445825	42	11	28	3	78
CRW_00464	-	0.88	0.80	0.97	212	462022	14	2	5	7	52
CRW_00466	SSU_rRNA_bacteria links to Rfam database...	0.95	0.92	0.98	421	1116336	10	3	5	2	37
CRW_00468	-	0.54	0.51	0.57	439	4290211	342	60	275	7	416
CRW_00471	-	0.58	0.53	0.63	459	4211526	280	45	223	12	412
CRW_00474	-	0.71	0.66	0.76	548	3976888	190	28	146	16	288
CRW_00476	-	0.72	0.66	0.78	582	4278529	180	24	140	16	297
CRW_00478	-	0.79	0.73	0.85	634	4150773	131	13	101	17	229
CRW_00487	-	0.66	0.60	0.72	527	4223143	212	29	172	11	345
CRW_00488	-	0.58	0.52	0.65	464	4325500	260	26	221	13	422
CRW_00490	-	0.50	0.46	0.53	400	4145005	364	34	321	9	462
CRW_00495	-	0.70	0.64	0.75	553	4205714	195	19	164	12	305
CRW_00496	-	0.65	0.60	0.70	516	4194121	227	30	189	8	350
CRW_00499	-	0.71	0.66	0.77	583	4372644	193	21	155	17	300
CRW_00500	-	0.67	0.62	0.72	541	4205696	225	32	181	12	327
CRW_00501	-	0.65	0.60	0.70	523	4284385	232	27	193	12	345
CRW_00502	-	0.72	0.69	0.76	603	4296049	206	25	169	12	269
CRW_00503	-	0.53	0.48	0.57	419	4252257	323	37	273	13	448
CRW_00507	-	0.66	0.61	0.72	528	4173876	210	36	165	9	337
CRW_00509	-	0.70	0.65	0.75	564	4182530	195	29	155	11	303
CRW_00511	-	0.55	0.50	0.60	432	4107693	298	26	260	12	424
CRW_00512	-	0.63	0.58	0.68	478	3815002	231	31	192	8	341
CRW_00516	-	0.67	0.62	0.72	543	4272676	219	15	192	12	333
CRW_00518	-	0.55	0.51	0.60	450	4357873	314	38	267	9	434
CRW_00520	-	0.56	0.52	0.59	444	4208600	322	35	272	15	406
CRW_00521	-	0.55	0.49	0.61	417	4136447	278	28	234	16	427
CRW_00522	-	0.31	0.28	0.33	221	3642980	461	77	372	12	561
CRW_00525	-	0.32	0.32	0.32	259	4059009	587	57	500	30	554
CRW_00530	-	0.29	0.28	0.30	74	534851	176	43	127	6	194
CRW_00535	-	0.45	0.44	0.47	144	898162	183	38	126	19	184
CRW_00538	-	0.31	0.29	0.34	88	811913	189	31	143	15	212
CRW_00542	-	0.20	0.21	0.20	67	994418	300	70	200	30	250
CRW_00547	-	0.62	0.59	0.66	507	4278506	275	33	229	13	356
CRW_00579	-	0.69	0.63	0.75	589	4290201	201	34	161	6	348
CRW_00583	-	0.69	0.63	0.75	589	4290201	201	34	161	6	348
CRW_00589	SSU_rRNA_bacteria links to Rfam database...	0.84	0.79	0.90	350	1094071	49	3	36	10	95
CRW_00590	SSU_rRNA_bacteria links to Rfam database...	0.85	0.79	0.91	358	1119364	45	3	31	11	94
CRW_00591	SSU_rRNA_bacteria links to Rfam database...	0.92	0.88	0.96	393	1098492	32	6	12	14	53
CRW_00594	-	0.21	0.21	0.21	83	1028491	337	39	282	16	312
CRW_00596	-	0.53	0.51	0.55	198	1024237	183	25	136	22	188
CRW_00597	-	0.36	0.35	0.38	143	1200100	258	38	194	26	268
CRW_00598	SSU_rRNA_eukarya links to Rfam database...	0.31	0.29	0.34	144	1665799	323	40	242	41	347
CRW_00599	-	0.49	0.46	0.52	253	3754681	568	34	202	332	293
CRW_00604	-	0.76	0.77	0.76	62	411696	170	7	13	150	19
CRW_00605	-	0.69	0.64	0.74	45	183860	94	0	16	78	25
CRW_00606	-	0.55	0.57	0.54	52	559057	214	15	29	170	40
CRW_00607	-	0.82	0.77	0.88	59	536063	209	0	8	201	18
CRW_00608	-	0.72	0.67	0.78	53	35710	20	0	15	5	26
CRW_00610	Intron_gpI links to Rfam database...	0.87	0.80	0.94	65	36246	7	1	3	3	16
CRW_00611	-	0.80	0.73	0.87	55	31312	10	1	7	2	20
CRW_00612	-	0.71	0.63	0.79	59	270405	125	0	16	109	34
CRW_00613	Intron_gpI links to Rfam database...	0.47	0.42	0.53	33	34918	36	3	26	7	45
CRW_00614	Intron_gpI links to Rfam database...	0.14	0.14	0.14	8	121715	98	13	35	50	49
CRW_00615	-	0.73	0.71	0.75	58	553801	230	14	5	211	24
CRW_00616	-	0.57	0.54	0.60	59	1699148	383	11	28	344	51
CRW_00617	-	0.35	0.38	0.32	24	426351	179	22	29	128	40
CRW_00618	Intron_gpI links to Rfam database...	0.21	0.21	0.21	13	56218	64	9	40	15	48
CRW_00619	Intron_gpI links to Rfam database...	0.00	0.00	0.00	0	164974	131	8	43	80	73
CRW_00620	Intron_gpI links to Rfam database...	0.31	0.32	0.31	20	150910	112	14	31	67	43
CRW_00621	Intron_gpI links to Rfam database...	0.44	0.41	0.48	29	153121	120	6	25	89	42
CRW_00623	Intron_gpI links to Rfam database...	0.35	0.30	0.41	25	129734	101	6	30	65	58
CRW_00626	-	0.70	0.68	0.71	71	100925	48	9	20	19	33
CRW_00629	-	0.72	0.70	0.74	86	91261	32	9	22	1	36
CRW_00632	-	0.92	0.88	0.97	113	82911	6	0	4	2	15
CRW_00633	Intron_gpI links to Rfam database...	0.81	0.75	0.86	80	63453	15	4	9	2	26
CRW_00634	Intron_gpI links to Rfam database...	0.62	0.62	0.62	58	64526	36	9	27	0	36
CRW_00635	-	0.58	0.54	0.62	74	109159	46	8	37	1	63
CRW_00636	-	0.61	0.57	0.64	82	114832	49	9	37	3	61
CRW_00637	-	0.42	0.39	0.44	62	133763	81	11	67	3	96
CRW_00639	-	0.89	0.86	0.94	118	126630	24	2	6	16	20
CRW_00641	-	0.83	0.82	0.85	62	39830	21	2	9	10	14
CRW_00642	-	0.57	0.60	0.53	39	47205	42	9	25	8	26
CRW_00643	-	0.66	0.65	0.67	79	123138	62	11	28	23	43
CRW_00645	-	0.81	0.81	0.81	54	35444	19	6	7	6	13
CRW_00646	-	0.58	0.55	0.61	35	34923	24	4	18	2	29
CRW_00648	-	0.76	0.74	0.78	109	137936	41	10	20	11	39
CRW_00649	-	0.69	0.65	0.73	80	204371	103	9	20	74	44
CRW_00650	-	0.80	0.75	0.85	106	112925	24	3	16	5	36
CRW_00651	-	0.88	0.83	0.92	101	100018	17	0	9	8	20
CRW_00652	-	0.85	0.81	0.90	105	132238	38	1	11	26	25
CRW_00653	-	0.95	0.92	0.98	123	94704	6	0	3	3	11
CRW_00654	-	0.91	0.85	0.97	105	78102	4	0	3	1	19
CRW_00655	-	0.89	0.82	0.97	102	89148	7	0	3	4	22
CRW_00656	-	0.76	0.71	0.81	92	90412	25	6	15	4	37
CRW_00657	-	0.87	0.84	0.90	114	105904	22	2	10	10	22
CRW_00658	-	0.70	0.68	0.72	69	74595	33	5	22	6	33
CRW_00659	-	0.50	0.49	0.52	30	32327	37	5	23	9	31
CRW_00660	-	0.48	0.47	0.50	28	22099	31	5	23	3	32
CRW_00661	-	0.17	0.18	0.17	9	24256	46	11	34	1	42
CRW_00662	-	0.42	0.42	0.42	27	28616	44	7	30	7	38
CRW_00663	-	0.22	0.21	0.23	13	26050	48	8	35	5	48
CRW_00664	-	0.05	0.05	0.05	4	53549	78	21	54	3	74
CRW_00665	-	0.10	0.10	0.10	5	23605	44	16	27	1	43
CRW_00666	-	0.74	0.71	0.77	89	96026	30	4	22	4	37
CRW_00668	-	0.76	0.75	0.78	112	163734	44	6	26	12	38
CRW_00669	-	0.70	0.66	0.76	78	97358	34	2	23	9	41
CRW_00670	Intron_gpI links to Rfam database...	0.86	0.83	0.90	99	70015	11	4	7	0	21
CRW_00671	Intron_gpI links to Rfam database...	0.83	0.79	0.88	92	62731	12	3	9	0	25
CRW_00672	Intron_gpI links to Rfam database...	0.86	0.84	0.89	93	72285	13	4	8	1	18
CRW_00673	-	0.83	0.84	0.81	88	100020	30	14	6	10	17
CRW_00674	Intron_gpI links to Rfam database...	0.81	0.77	0.85	95	83324	19	1	16	2	29
CRW_00676	Intron_gpI links to Rfam database...	0.60	0.57	0.63	66	93424	41	9	29	3	49
CRW_00677	-	0.81	0.75	0.87	79	71919	17	5	7	5	26
CRW_00678	-	0.48	0.51	0.45	62	666296	245	14	63	168	59
CRW_00679	-	0.79	0.74	0.84	79	76542	19	5	10	4	28
CRW_00680	-	0.88	0.84	0.92	102	516525	157	3	6	148	20
CRW_00681	-	0.66	0.66	0.66	74	112938	53	13	25	15	38
CRW_00683	-	0.61	0.64	0.58	86	460172	167	26	36	105	49
CRW_00684	-	0.60	0.64	0.56	86	612017	209	26	42	141	49
CRW_00685	-	0.69	0.70	0.69	74	156972	62	16	18	28	32
CRW_00686	-	0.61	0.57	0.66	71	95159	48	2	34	12	54
CRW_00687	-	0.71	0.67	0.76	44	28622	18	6	8	4	22
CRW_00688	-	0.84	0.81	0.88	46	21893	6	2	4	0	11
CRW_00689	-	0.53	0.52	0.55	40	33597	35	6	27	2	37
CRW_00690	-	0.56	0.52	0.60	36	33351	28	5	19	4	33
CRW_00691	-	0.65	0.63	0.67	42	27198	24	3	18	3	25
CRW_00692	Intron_gpI links to Rfam database...	0.77	0.73	0.81	66	68554	24	6	9	9	24
CRW_00693	-	0.86	0.83	0.90	101	89141	22	0	11	11	21
CRW_00694	-	0.89	0.84	0.95	102	85798	7	0	5	2	20
CRW_00699	-	0.82	0.76	0.88	96	91697	14	0	13	1	30
CRW_00700	-	0.83	0.79	0.87	116	180767	38	2	16	20	31
CRW_00702	-	0.74	0.79	0.69	59	357350	156	19	7	130	16
CRW_00703	-	0.55	0.55	0.55	36	40405	36	9	20	7	30
CRW_00704	-	0.58	0.54	0.61	51	386677	165	11	21	133	43
CRW_00705	-	0.29	0.33	0.27	28	1461090	408	29	48	331	58
CRW_00706	-	0.54	0.63	0.47	37	695531	262	23	19	220	22
CRW_00708	-	0.32	0.36	0.29	24	3457052	605	37	22	546	42
CRW_00709	-	0.17	0.18	0.17	15	1728783	445	12	60	373	70
CRW_00710	-	0.65	0.63	0.68	72	1040297	294	10	24	260	42
CRW_00711	-	0.12	0.15	0.09	19	2318580	512	98	84	330	105
CRW_00712	-	0.59	0.58	0.61	63	952786	270	6	35	229	45
CRW_00713	-	0.64	0.59	0.70	60	731359	250	4	22	224	41
CRW_00714	-	0.50	0.47	0.54	50	186263	93	12	30	51	57
CRW_00715	-	0.66	0.57	0.78	59	69302	19	1	16	2	45
CRW_00716	-	0.62	0.56	0.68	50	193679	82	2	22	58	39
CRW_00717	-	0.49	0.43	0.56	64	153620	68	11	40	17	84
CRW_00718	-	0.63	0.54	0.73	103	189894	55	1	38	16	88
CRW_00719	-	0.71	0.73	0.69	66	230086	86	15	14	57	25
CRW_00720	-	0.57	0.60	0.53	55	208231	98	25	24	49	36
CRW_00721	-	0.62	0.62	0.63	42	58586	53	8	17	28	26
CRW_00723	-	0.35	0.38	0.32	28	1583223	420	22	37	361	46
CRW_00758	SSU_rRNA_eukarya links to Rfam database...	0.46	0.45	0.48	217	1640313	290	20	216	54	266
CRW_00759	SSU_rRNA_eukarya links to Rfam database...	0.40	0.38	0.42	181	1636714	284	45	205	34	300
CRW_00760	SSU_rRNA_eukarya links to Rfam database...	0.41	0.39	0.43	189	1638513	310	51	202	57	297
CRW_00761	-	0.34	0.33	0.35	156	2863981	522	58	226	238	318
CRW_00763	SSU_rRNA_bacteria links to Rfam database...	0.75	0.69	0.82	306	1215649	111	12	53	46	140
CRW_00764	-	0.28	0.27	0.29	53	252935	134	29	99	6	143
CRW_00765	-	0.86	0.79	0.93	203	452457	30	4	12	14	54
CRW_00766	-	0.41	0.38	0.45	92	440185	127	14	100	13	148
CRW_00768	-	0.83	0.76	0.92	196	471692	35	1	17	17	63
CRW_00769	-	0.69	0.62	0.78	155	451525	53	9	36	8	97
CRW_00772	SSU_rRNA_bacteria links to Rfam database...	0.71	0.65	0.79	262	945667	95	9	62	24	142
CRW_00773	-	0.80	0.74	0.87	192	451505	40	1	27	12	67
CRW_00774	-	0.85	0.78	0.94	205	488347	28	1	13	14	58
CRW_00775	-	0.30	0.27	0.34	57	314654	128	18	92	18	155
CRW_00777	-	0.46	0.44	0.48	135	719120	172	28	117	27	169
CRW_00778	SSU_rRNA_bacteria links to Rfam database...	0.71	0.64	0.79	246	1201714	124	13	52	59	138
CRW_00779	-	0.48	0.44	0.53	184	1031419	181	18	145	18	238
CRW_00780	-	0.81	0.73	0.90	185	475594	40	5	16	19	70
CRW_00781	-	0.66	0.62	0.70	278	1978660	242	16	101	125	172
CRW_00783	-	0.82	0.73	0.93	188	453425	24	2	13	9	71
CRW_00784	-	0.88	0.80	0.96	210	456272	24	2	6	16	52
CRW_00785	-	0.80	0.72	0.88	183	452468	37	3	22	12	70
CRW_00786	-	0.74	0.70	0.78	317	1946946	215	12	76	127	133
CRW_00787	-	0.47	0.44	0.50	134	646683	154	23	113	18	172
CRW_00788	-	0.31	0.29	0.32	106	1758421	364	42	181	141	255
CRW_00789	SSU_rRNA_bacteria links to Rfam database...	0.85	0.80	0.91	357	1137392	54	3	34	17	90
CRW_00790	-	0.67	0.62	0.71	279	1803659	212	12	100	100	168
CRW_00792	-	0.41	0.39	0.43	149	1581184	327	36	162	129	234
CRW_00793	-	0.54	0.50	0.58	189	1048748	192	25	114	53	188
CRW_00794	-	0.57	0.50	0.64	123	434586	76	10	59	7	123
CRW_00795	SSU_rRNA_bacteria links to Rfam database...	0.65	0.59	0.71	232	1152596	140	14	79	47	162
CRW_00796	-	0.47	0.41	0.55	96	384827	87	6	74	7	139
CRW_00797	-	0.41	0.39	0.44	132	692956	181	21	144	16	210
CRW_00800	SSU_rRNA_eukarya links to Rfam database...	0.83	0.77	0.89	361	1401569	111	5	40	66	109
CRW_00801	-	0.72	0.68	0.76	169	438295	67	11	41	15	80
CRW_00802	-	0.69	0.64	0.75	162	460104	68	15	39	14	91
CRW_00803	-	0.69	0.64	0.75	287	1952895	243	11	83	149	162
CRW_00804	-	0.26	0.23	0.30	94	1420143	299	34	184	81	309
CRW_00806	-	0.69	0.64	0.75	287	1913565	227	11	83	133	162
CRW_00807	-	0.59	0.56	0.62	224	1391587	214	15	120	79	174
CRW_00808	-	0.35	0.33	0.38	117	1301385	278	50	139	89	239
CRW_00813	-	0.36	0.39	0.33	52	530805	210	44	64	102	81
CRW_00815	-	0.69	0.69	0.68	109	159735	53	14	37	2	49
CRW_00816	-	0.54	0.53	0.55	69	143791	66	13	43	10	60
CRW_00820	-	0.62	0.59	0.64	86	136369	59	8	40	11	59
CRW_00849	SSU_rRNA_bacteria links to Rfam database...	0.93	0.90	0.96	425	1117816	31	1	18	12	45
CRW_00997	SSU_rRNA_bacteria links to Rfam database...	0.92	0.90	0.95	419	1135835	28	6	18	4	45
CRW_01134	-	0.68	0.63	0.75	267	964999	103	10	79	14	160
CRW_01153	SSU_rRNA_eukarya links to Rfam database...	0.41	0.40	0.43	199	1606068	288	37	224	27	304
CRW_01168	-	0.79	0.73	0.86	298	900806	67	5	44	18	113
CRW_01171	SSU_rRNA_eukarya links to Rfam database...	0.50	0.47	0.53	237	1593555	238	35	178	25	269
CRW_01186	-	0.81	0.76	0.87	293	836234	52	8	36	8	93
CRW_01188	-	0.50	0.46	0.54	180	837529	163	17	139	7	213
CRW_01189	-	0.58	0.54	0.63	211	862304	132	17	109	6	181
CRW_01214	-	0.79	0.73	0.87	295	931954	52	12	34	6	110
CRW_01222	-	0.59	0.54	0.66	213	912953	120	18	92	10	184
CRW_01224	-	0.76	0.70	0.83	276	912945	62	8	47	7	121
CRW_01239	-	0.56	0.51	0.61	193	840140	134	22	101	11	189
CRW_01250	-	0.79	0.71	0.88	269	781568	41	5	33	3	109
CRW_01260	-	0.73	0.64	0.82	252	912969	76	0	55	21	141
CRW_01266	-	0.78	0.73	0.84	278	818229	67	5	48	14	103
CRW_01271	-	0.58	0.54	0.63	205	827215	135	18	103	14	176
CRW_01275	-	0.79	0.74	0.84	321	1082273	75	15	47	13	111
CRW_01283	-	0.80	0.73	0.87	299	963624	64	6	37	21	110
CRW_01300	SSU_rRNA_eukarya links to Rfam database...	0.38	0.36	0.40	185	1693252	309	52	231	26	330
CRW_01314	-	0.69	0.61	0.78	249	937446	74	11	59	4	158
CRW_01343	SSU_rRNA_archaea links to Rfam database...	0.82	0.76	0.89	328	977531	59	6	36	17	106
CRW_01344	-	0.67	0.62	0.73	226	791602	94	9	74	11	140
CRW_01456	-	0.54	0.51	0.58	431	4240579	337	32	286	19	420
PDB_00005	Tymo_tRNA-like links to Rfam database...	0.42	0.36	0.50	5	936	5	0	5	0	9
PDB_00018	-	0.22	0.20	0.27	4	1020	11	2	9	0	16
PDB_00020	-	0.41	0.35	0.50	7	766	7	0	7	0	13
PDB_00041	-	0.70	0.50	1.00	6	624	0	0	0	0	6
PDB_00053	-	0.73	0.55	1.00	6	429	0	0	0	0	5
PDB_00056	-	0.93	0.88	1.00	14	616	0	0	0	0	2
PDB_00072	-	0.49	0.50	0.49	104	148029	107	13	94	0	106
PDB_00078	-	0.80	0.75	0.86	86	49670	14	3	11	0	29
PDB_00079	-	0.73	0.68	0.79	96	121649	52	10	16	26	46
PDB_00123	-	-0.01	0.00	0.00	0	4151	35	0	35	0	36
PDB_00124	-	0.70	0.50	1.00	5	491	0	0	0	0	5
PDB_00128	-	0.75	0.57	1.00	8	488	0	0	0	0	6
PDB_00134	-	0.57	0.50	0.67	4	372	2	0	2	0	4
PDB_00138	-	-0.02	0.00	0.00	0	372	6	1	5	0	8
PDB_00187	-	0.43	0.41	0.45	293	3746300	427	60	300	67	423
PDB_00209	-	0.67	0.45	1.00	5	556	0	0	0	0	6
PDB_00243	-	0.50	0.42	0.63	5	622	3	0	3	0	7
PDB_00278	-	0.64	0.56	0.74	40	24922	14	0	14	0	32
PDB_00352	-	0.92	0.84	1.00	16	1209	0	0	0	0	3
PDB_00370	-	0.12	0.16	0.10	4	15185	36	7	29	0	21
PDB_00401	-	0.62	0.54	0.71	511	3996657	237	37	173	27	442
PDB_00403	-	0.76	0.70	0.82	107	124619	34	7	17	10	46
PDB_00409	-	0.60	0.61	0.60	149	688301	225	27	74	124	96
PDB_00423	-	0.86	0.76	0.98	56	26739	1	1	0	0	18
PDB_00447	-	-0.01	0.00	0.00	0	7108	32	8	24	0	44
PDB_00571	tRNA links to Rfam database...	0.85	0.76	0.95	19	3301	1	1	0	0	6
PDB_00609	-	0.48	0.46	0.50	363	4156560	403	66	297	40	427
PDB_00644	-	0.50	0.47	0.52	386	4328414	398	78	275	45	434
PDB_00675	-	0.61	0.53	0.70	519	4168083	252	34	192	26	455
PDB_00701	-	0.71	0.65	0.78	71	45360	24	0	20	4	38
PDB_00703	SSU_rRNA_bacteria links to Rfam database...	0.87	0.79	0.96	392	1073435	37	4	14	19	103
PDB_00704	-	0.64	0.56	0.74	541	4249337	226	30	162	34	432
PDB_00713	-	0.42	0.38	0.47	8	1999	9	0	9	0	13
PDB_00716	HDV_ribozyme links to Rfam database...	-0.01	0.00	0.00	0	2687	14	0	14	0	23
PDB_00747	-	0.81	0.69	0.95	55	24473	3	0	3	0	25
PDB_00804	-	0.86	0.84	0.88	42	15352	8	0	6	2	8
PDB_00805	-	0.65	0.61	0.69	183	467763	101	10	72	19	119
PDB_00827	Intron_gpI links to Rfam database...	0.79	0.65	0.96	53	26973	3	0	2	1	28
PDB_00828	Purine links to Rfam database...	0.86	0.74	1.00	20	2465	0	0	0	0	7
PDB_00829	Purine links to Rfam database...	0.86	0.75	1.00	18	2260	0	0	0	0	6
PDB_00842	-	0.72	0.63	0.83	5	372	1	0	1	0	3
PDB_00851	-	0.45	0.39	0.53	16	4723	14	0	14	0	25
PDB_00854	SSU_rRNA_bacteria links to Rfam database...	0.90	0.85	0.95	455	1500298	52	7	18	27	80
PDB_00857	-	0.67	0.60	0.75	9	1069	3	0	3	0	6
PDB_00874	-	-0.02	0.00	0.00	0	929	17	0	17	0	20
PDB_00886	-	-0.01	0.00	0.00	0	4151	35	0	35	0	40
PDB_00917	-	0.84	0.79	0.89	75	35161	19	4	5	10	20
PDB_00918	-	0.67	0.57	0.80	4	320	1	0	1	0	3
PDB_00919	RNaseP_bact_a links to Rfam database...	0.65	0.56	0.75	58	44176	24	1	18	5	45
PDB_00947	-	0.66	0.65	0.68	484	4310804	365	48	180	137	265
PDB_00993	-	0.46	0.44	0.49	350	3923488	392	62	301	29	452
PDB_01009	tRNA links to Rfam database...	0.90	0.90	0.90	19	2464	3	0	2	1	2
PDB_01020	Purine links to Rfam database...	0.86	0.74	1.00	17	2261	1	0	0	1	6
PDB_01040	-	0.30	0.30	0.33	6	1110	12	0	12	0	14
PDB_01059	-	0.75	0.57	1.00	4	227	0	0	0	0	3
PDB_01070	-	0.17	0.15	0.21	8	12682	30	0	30	0	46
PDB_01073	SAM links to Rfam database...	0.48	0.44	0.54	15	4343	13	2	11	0	19
PDB_01088	SSU_rRNA_bacteria links to Rfam database...	0.85	0.78	0.93	426	1471011	64	4	29	31	121
PDB_01089	-	0.61	0.57	0.64	434	4053453	340	70	171	99	325
PDB_01092	glmS links to Rfam database...	0.70	0.63	0.77	33	10110	12	1	9	2	19
PDB_01103	SSU_rRNA_bacteria links to Rfam database...	0.86	0.81	0.91	455	1606027	68	3	43	22	107
PDB_01105	SSU_rRNA_bacteria links to Rfam database...	0.90	0.85	0.96	459	1433493	36	3	16	17	81
PDB_01120	SSU_rRNA_bacteria links to Rfam database...	0.88	0.80	0.97	422	1204693	33	2	11	20	105
PDB_01129	-	0.37	0.34	0.41	24	35453	38	18	16	4	47
PDB_01140	-	0.69	0.63	0.76	588	4176720	246	29	158	59	342
PDB_01157	-	0.33	0.31	0.36	30	50003	54	10	43	1	68
PDB_01166	-	0.59	0.54	0.64	115	181926	70	7	58	5	97
PDB_01194	-	0.77	0.60	1.00	9	487	0	0	0	0	6
PDB_01201	-	0.53	0.41	0.69	9	1115	4	0	4	0	13
PDB_01203	-	0.77	0.68	0.87	13	1161	2	2	0	0	6
PDB_01250	-	0.22	0.20	0.24	8	12057	26	3	22	1	33
PDB_01260	-	0.52	0.36	0.75	9	1818	3	0	3	0	16
PDB_01261	-	0.68	0.58	0.79	196	467781	51	4	47	0	140
PDB_01273	SSU_rRNA_bacteria links to Rfam database...	0.86	0.78	0.94	385	1117852	50	4	19	27	106
PDB_01281	-	-0.03	0.00	0.00	0	366	12	0	12	0	14
PDB_01299	-	0.73	0.60	0.90	9	893	3	1	0	2	6
PDB_01309	-	-0.01	0.00	0.00	0	9120	60	9	51	0	39
RFA_00597	Telomerase-vert links to Rfam database...	0.40	0.40	0.39	44	97791	79	14	54	11	65
RFA_00598	Telomerase-vert links to Rfam database...	0.45	0.45	0.46	45	84568	67	11	42	14	56
RFA_00599	Telomerase-vert links to Rfam database...	0.27	0.27	0.27	30	101365	98	14	66	18	81
RFA_00600	Telomerase-vert links to Rfam database...	0.23	0.24	0.21	24	120183	108	34	54	20	76
RFA_00601	Telomerase-vert links to Rfam database...	0.33	0.35	0.32	40	99109	96	28	58	10	74
RFA_00602	Telomerase-vert links to Rfam database...	0.52	0.53	0.51	61	101356	72	21	37	14	55
RFA_00632	HDV_ribozyme links to Rfam database...	0.25	0.25	0.26	7	4068	20	1	19	0	21
RFA_00636	HDV_ribozyme links to Rfam database...	0.52	0.43	0.63	12	3986	7	0	7	0	16
RFA_00767	Corona_pk3 links to Rfam database...	0.59	0.56	0.63	10	1875	6	3	3	0	8
RFA_00768	Corona_pk3 links to Rfam database...	0.61	0.56	0.67	10	1876	5	2	3	0	8
RFA_00769	Corona_pk3 links to Rfam database...	0.55	0.56	0.56	10	1935	8	4	4	0	8
RFA_00770	Corona_pk3 links to Rfam database...	0.61	0.56	0.67	10	2001	5	2	3	0	8
RFA_00773	Corona_pk3 links to Rfam database...	0.59	0.56	0.63	10	1937	6	1	5	0	8
RFA_00779	Corona_pk3 links to Rfam database...	0.61	0.56	0.67	10	1938	5	2	3	0	8
RFA_00808	RydC links to Rfam database...	0.58	0.44	0.78	7	2007	2	0	2	0	9
RFA_00809	RydC links to Rfam database...	0.39	0.31	0.50	5	2135	6	0	5	1	11
TMR_00007	tmRNA links to Rfam database...	0.79	0.74	0.83	80	61680	20	4	12	4	28
TMR_00008	tmRNA links to Rfam database...	0.68	0.62	0.74	66	65977	29	9	14	6	40
TMR_00010	tmRNA links to Rfam database...	0.60	0.54	0.67	52	57892	26	2	24	0	44
TMR_00012	tmRNA links to Rfam database...	0.62	0.59	0.64	48	64545	39	7	20	12	33
TMR_00014	tmRNA links to Rfam database...	0.85	0.75	0.95	83	68548	9	1	3	5	27
TMR_00017	tmRNA links to Rfam database...	0.84	0.76	0.93	78	67077	6	2	4	0	24
TMR_00018	tmRNA links to Rfam database...	0.77	0.73	0.82	67	64538	15	7	8	0	25
TMR_00028	tmRNA links to Rfam database...	0.69	0.64	0.74	62	62751	23	5	17	1	35
TMR_00030	tmRNA links to Rfam database...	0.47	0.44	0.50	49	75757	50	10	39	1	62
TMR_00034	tmRNA links to Rfam database...	0.65	0.61	0.71	67	59936	33	1	27	5	43
TMR_00035	tmRNA links to Rfam database...	0.50	0.46	0.55	45	67814	43	4	33	6	53
TMR_00036	tmRNA links to Rfam database...	0.53	0.48	0.59	48	90443	62	6	28	28	53
TMR_00038	tmRNA links to Rfam database...	0.73	0.66	0.81	73	71163	17	5	12	0	37
TMR_00042	tmRNA links to Rfam database...	0.54	0.47	0.62	46	62761	31	4	24	3	52
TMR_00046	tmRNA links to Rfam database...	0.54	0.51	0.58	49	62750	39	6	30	3	47
TMR_00047	tmRNA links to Rfam database...	0.30	0.33	0.28	19	48448	51	17	32	2	38
TMR_00048	tmRNA links to Rfam database...	0.52	0.48	0.55	46	64897	44	5	32	7	49
TMR_00049	tmRNA links to Rfam database...	0.34	0.32	0.36	28	63112	58	9	41	8	59
TMR_00051	tmRNA links to Rfam database...	0.74	0.66	0.83	62	65628	24	0	13	11	32
TMR_00055	tmRNA links to Rfam database...	0.39	0.36	0.43	41	78907	55	15	40	0	73
TMR_00057	tmRNA links to Rfam database...	0.49	0.53	0.46	42	73829	57	19	30	8	37
TMR_00061	tmRNA links to Rfam database...	0.54	0.52	0.56	51	59594	50	9	31	10	48
TMR_00062	tmRNA links to Rfam database...	0.73	0.68	0.78	71	78515	29	7	13	9	33
TMR_00064	tmRNA links to Rfam database...	0.51	0.46	0.57	47	76945	38	8	28	2	56
TMR_00065	tmRNA links to Rfam database...	0.69	0.60	0.79	64	76555	18	5	12	1	42
TMR_00067	tmRNA links to Rfam database...	0.76	0.70	0.82	80	82117	21	4	14	3	34
TMR_00073	tmRNA links to Rfam database...	0.60	0.53	0.69	62	65613	28	4	24	0	55
TMR_00076	tmRNA links to Rfam database...	0.63	0.60	0.67	60	70786	39	10	20	9	40
TMR_00080	tmRNA links to Rfam database...	0.60	0.59	0.61	57	70407	37	8	28	1	39
TMR_00081	tmRNA links to Rfam database...	0.73	0.64	0.84	68	67080	14	1	12	1	38
TMR_00082	tmRNA links to Rfam database...	0.70	0.64	0.77	61	67817	20	7	11	2	35
TMR_00083	tmRNA links to Rfam database...	0.83	0.75	0.91	79	68178	9	2	6	1	26
TMR_00092	tmRNA links to Rfam database...	0.63	0.63	0.62	64	67425	43	9	30	4	37
TMR_00093	tmRNA links to Rfam database...	0.61	0.58	0.64	59	64169	35	8	25	2	43
TMR_00096	tmRNA links to Rfam database...	0.50	0.47	0.54	47	64893	40	13	27	0	53
TMR_00101	tmRNA links to Rfam database...	0.77	0.73	0.82	78	64166	19	3	14	2	29
TMR_00102	tmRNA links to Rfam database...	0.43	0.43	0.44	43	64164	56	9	45	2	58
TMR_00103	tmRNA links to Rfam database...	0.73	0.69	0.77	75	64163	25	9	14	2	33
TMR_00104	-	0.19	0.20	0.18	14	66716	73	24	41	8	56
TMR_00106	tmRNA links to Rfam database...	0.65	0.63	0.67	76	89987	41	7	30	4	44
TMR_00109	tmRNA links to Rfam database...	0.58	0.52	0.65	64	88311	41	4	31	6	58
TMR_00111	tmRNA links to Rfam database...	0.56	0.51	0.61	62	90424	42	9	30	3	60
TMR_00116	tmRNA links to Rfam database...	0.54	0.50	0.58	52	64890	45	5	33	7	52
TMR_00117	tmRNA links to Rfam database...	0.69	0.64	0.73	76	80096	38	7	21	10	42
TMR_00118	tmRNA links to Rfam database...	0.71	0.64	0.78	77	81307	29	3	19	7	43
TMR_00119	tmRNA links to Rfam database...	0.71	0.68	0.75	71	71915	28	6	18	4	33
TMR_00123	tmRNA links to Rfam database...	0.88	0.79	0.99	80	66349	1	1	0	0	21
TMR_00124	tmRNA links to Rfam database...	0.59	0.56	0.63	55	70412	41	8	25	8	43
TMR_00125	tmRNA links to Rfam database...	0.71	0.65	0.79	64	64180	21	5	12	4	35
TMR_00127	tmRNA links to Rfam database...	0.71	0.65	0.77	63	62753	26	2	17	7	34
TMR_00128	tmRNA links to Rfam database...	0.53	0.52	0.54	50	60982	43	10	33	0	46
TMR_00131	tmRNA links to Rfam database...	0.65	0.60	0.70	59	64896	27	3	22	2	40
TMR_00135	tmRNA links to Rfam database...	0.73	0.66	0.80	65	62754	25	2	14	9	34
TMR_00136	tmRNA links to Rfam database...	0.57	0.53	0.61	54	74602	42	5	30	7	47
TMR_00137	tmRNA links to Rfam database...	0.75	0.66	0.86	59	61006	13	1	9	3	30
TMR_00139	tmRNA links to Rfam database...	0.49	0.51	0.48	46	62033	53	17	32	4	45
TMR_00140	tmRNA links to Rfam database...	0.81	0.73	0.90	73	73839	21	5	3	13	27
TMR_00142	tmRNA links to Rfam database...	0.57	0.52	0.63	53	70792	41	6	25	10	49
TMR_00143	tmRNA links to Rfam database...	0.74	0.67	0.81	69	64535	26	4	12	10	34
TMR_00144	tmRNA links to Rfam database...	0.59	0.55	0.63	57	74214	34	7	27	0	46
TMR_00146	tmRNA links to Rfam database...	0.76	0.71	0.81	30	32094	32	3	4	25	12
TMR_00150	tmRNA links to Rfam database...	0.63	0.60	0.68	25	43034	45	3	9	33	17
TMR_00152	tmRNA links to Rfam database...	0.43	0.40	0.47	46	81309	59	2	49	8	69
TMR_00155	tmRNA links to Rfam database...	0.56	0.48	0.65	50	61699	34	1	26	7	54
TMR_00156	tmRNA links to Rfam database...	0.77	0.71	0.84	69	60296	17	3	10	4	28
TMR_00158	tmRNA links to Rfam database...	0.55	0.48	0.62	48	60649	30	1	28	1	51
TMR_00159	tmRNA links to Rfam database...	0.59	0.55	0.63	51	62047	32	6	24	2	41
TMR_00160	tmRNA links to Rfam database...	0.80	0.75	0.86	71	64537	20	5	7	8	24
TMR_00164	tmRNA links to Rfam database...	0.69	0.61	0.77	65	66711	21	1	18	2	41
TMR_00165	tmRNA links to Rfam database...	0.54	0.49	0.59	48	61695	39	7	26	6	49
TMR_00166	tmRNA links to Rfam database...	0.74	0.68	0.81	69	61691	16	5	11	0	32
TMR_00168	tmRNA links to Rfam database...	0.77	0.71	0.84	81	60979	19	1	14	4	33
TMR_00173	tmRNA links to Rfam database...	0.32	0.36	0.29	15	42144	55	13	23	19	27
TMR_00179	tmRNA links to Rfam database...	0.65	0.62	0.68	61	67071	37	3	26	8	37
TMR_00180	tmRNA links to Rfam database...	0.68	0.63	0.74	62	67077	27	6	16	5	37
TMR_00182	tmRNA links to Rfam database...	0.47	0.44	0.50	45	66340	50	4	41	5	57
TMR_00183	tmRNA links to Rfam database...	0.48	0.47	0.51	48	63095	49	3	44	2	55
TMR_00184	tmRNA links to Rfam database...	0.52	0.50	0.55	51	63097	43	4	38	1	51
TMR_00193	tmRNA links to Rfam database...	0.35	0.34	0.37	27	59267	55	11	35	9	53
TMR_00194	tmRNA links to Rfam database...	0.57	0.52	0.64	48	62760	30	1	26	3	45
TMR_00196	tmRNA links to Rfam database...	0.51	0.46	0.56	45	60994	40	8	28	4	52
TMR_00199	tmRNA links to Rfam database...	0.47	0.47	0.47	43	62744	53	17	31	5	49
TMR_00200	-	0.47	0.45	0.49	34	41546	45	7	29	9	41
TMR_00204	tmRNA links to Rfam database...	0.59	0.52	0.67	50	60303	28	7	18	3	47
TMR_00207	tmRNA links to Rfam database...	0.75	0.68	0.83	70	72306	15	2	12	1	33
TMR_00223	tmRNA links to Rfam database...	0.57	0.53	0.62	50	64180	32	9	22	1	45
TMR_00224	tmRNA links to Rfam database...	0.75	0.65	0.87	66	64904	15	3	7	5	35
TMR_00226	tmRNA links to Rfam database...	0.69	0.65	0.73	68	69658	31	5	20	6	37
TMR_00227	tmRNA links to Rfam database...	0.70	0.66	0.74	67	70034	27	4	20	3	34
TMR_00228	tmRNA links to Rfam database...	0.48	0.45	0.51	49	88313	48	14	34	0	59
TMR_00234	tmRNA links to Rfam database...	0.77	0.69	0.85	70	58914	17	2	10	5	32
TMR_00238	tmRNA links to Rfam database...	0.46	0.47	0.45	47	84562	64	12	45	7	54
TMR_00239	tmRNA links to Rfam database...	0.70	0.69	0.72	66	61684	26	7	19	0	30
TMR_00240	tmRNA links to Rfam database...	0.59	0.60	0.59	51	63103	40	12	24	4	34
TMR_00246	-	0.42	0.44	0.41	15	78173	83	5	17	61	19
TMR_00248	tmRNA links to Rfam database...	0.38	0.42	0.35	16	54239	62	17	13	32	22
TMR_00257	tmRNA links to Rfam database...	0.78	0.70	0.86	69	67081	11	1	10	0	29
TMR_00259	tmRNA links to Rfam database...	0.64	0.55	0.74	57	67819	20	7	13	0	46
TMR_00261	tmRNA links to Rfam database...	0.59	0.55	0.63	56	66706	33	7	26	0	45
TMR_00262	tmRNA links to Rfam database...	0.65	0.62	0.68	64	74211	31	6	24	1	40
TMR_00271	tmRNA links to Rfam database...	0.66	0.62	0.71	56	64182	27	6	17	4	35
TMR_00274	tmRNA links to Rfam database...	0.71	0.66	0.78	69	66706	25	4	16	5	36
TMR_00278	tmRNA links to Rfam database...	0.70	0.64	0.77	65	67812	25	2	17	6	37
TMR_00279	tmRNA links to Rfam database...	0.45	0.40	0.50	38	68930	46	5	33	8	56
TMR_00280	tmRNA links to Rfam database...	0.72	0.67	0.77	68	65978	26	1	19	6	33
TMR_00283	tmRNA links to Rfam database...	0.64	0.58	0.70	56	65261	31	8	16	7	40
TMR_00289	tmRNA links to Rfam database...	0.63	0.63	0.63	62	67063	39	16	20	3	36
TMR_00290	tmRNA links to Rfam database...	0.64	0.63	0.66	58	64173	35	4	26	5	34
TMR_00296	tmRNA links to Rfam database...	0.29	0.29	0.29	28	68910	68	16	52	0	70
TMR_00298	tmRNA links to Rfam database...	0.50	0.47	0.54	47	68178	43	9	31	3	54
TMR_00300	tmRNA links to Rfam database...	0.53	0.49	0.57	55	70404	48	3	38	7	57
TMR_00301	tmRNA links to Rfam database...	0.68	0.63	0.73	60	82133	33	5	17	11	36
TMR_00302	tmRNA links to Rfam database...	0.55	0.54	0.56	51	77330	49	11	29	9	43
TMR_00305	tmRNA links to Rfam database...	0.78	0.70	0.88	71	60994	17	2	8	7	31
TMR_00306	tmRNA links to Rfam database...	0.79	0.75	0.83	79	64166	19	2	14	3	27
TMR_00310	tmRNA links to Rfam database...	0.61	0.56	0.66	55	63820	32	3	25	4	43
TMR_00317	tmRNA links to Rfam database...	0.61	0.59	0.64	60	68171	37	3	31	3	42
TMR_00331	tmRNA links to Rfam database...	0.48	0.49	0.48	40	66712	56	9	34	13	42
TMR_00332	tmRNA links to Rfam database...	0.78	0.70	0.88	69	67083	10	2	7	1	30
TMR_00334	tmRNA links to Rfam database...	0.77	0.68	0.87	69	66716	10	3	7	0	32
TMR_00337	tmRNA links to Rfam database...	0.57	0.51	0.64	61	82933	34	3	31	0	58
TMR_00340	tmRNA links to Rfam database...	0.63	0.58	0.68	47	64192	38	6	16	16	34
TMR_00341	tmRNA links to Rfam database...	0.63	0.60	0.65	55	63106	31	8	21	2	37
TMR_00343	tmRNA links to Rfam database...	0.74	0.69	0.80	72	64890	18	2	16	0	33
TMR_00345	tmRNA links to Rfam database...	0.62	0.60	0.65	62	63808	39	3	30	6	42
TMR_00346	tmRNA links to Rfam database...	0.65	0.60	0.70	56	64181	26	5	19	2	38
TMR_00348	tmRNA links to Rfam database...	0.41	0.36	0.47	36	77344	54	8	33	13	63
TMR_00352	tmRNA links to Rfam database...	0.25	0.28	0.23	21	95173	89	16	56	17	54
TMR_00353	tmRNA links to Rfam database...	0.51	0.48	0.56	50	84165	52	10	30	12	55
TMR_00357	tmRNA links to Rfam database...	0.53	0.52	0.54	48	82939	55	17	24	14	44
TMR_00358	tmRNA links to Rfam database...	0.66	0.60	0.74	59	74998	36	4	17	15	40
TMR_00361	-	0.36	0.44	0.29	32	93419	78	34	43	1	40
TMR_00366	tmRNA links to Rfam database...	0.51	0.48	0.54	48	67807	51	15	26	10	52
TMR_00372	tmRNA links to Rfam database...	0.64	0.65	0.64	62	70403	44	9	26	9	34
TMR_00374	tmRNA links to Rfam database...	0.61	0.60	0.63	55	81723	34	12	20	2	37
TMR_00375	tmRNA links to Rfam database...	0.65	0.58	0.72	57	73457	34	3	19	12	41
TMR_00376	tmRNA links to Rfam database...	0.65	0.61	0.68	58	74606	35	11	16	8	37
TMR_00378	tmRNA links to Rfam database...	0.52	0.49	0.55	48	67809	45	13	26	6	49
TMR_00383	tmRNA links to Rfam database...	0.56	0.53	0.59	53	66705	44	7	30	7	47
TMR_00384	tmRNA links to Rfam database...	0.82	0.72	0.93	78	65619	6	0	6	0	30
TMR_00393	tmRNA links to Rfam database...	0.62	0.62	0.61	33	53247	59	9	12	38	20
TMR_00395	tmRNA links to Rfam database...	0.77	0.68	0.87	74	64535	11	4	7	0	35
TMR_00398	tmRNA links to Rfam database...	0.76	0.69	0.85	73	65255	13	5	8	0	33
TMR_00399	tmRNA links to Rfam database...	0.55	0.53	0.56	50	64891	41	11	28	2	44
TMR_00404	tmRNA links to Rfam database...	0.70	0.70	0.70	64	67437	40	9	18	13	28
TMR_00408	tmRNA links to Rfam database...	0.54	0.52	0.57	46	65985	39	12	23	4	42
TMR_00409	tmRNA links to Rfam database...	0.85	0.85	0.85	39	68589	57	1	6	50	7
TMR_00411	tmRNA links to Rfam database...	0.40	0.40	0.41	35	60989	58	10	41	7	52
TMR_00415	tmRNA links to Rfam database...	0.57	0.55	0.60	56	67067	42	4	34	4	45
TMR_00419	tmRNA links to Rfam database...	0.50	0.43	0.59	48	81728	50	7	27	16	63
TMR_00422	tmRNA links to Rfam database...	0.55	0.53	0.58	49	67811	44	7	29	8	43
TMR_00423	tmRNA links to Rfam database...	0.52	0.56	0.49	41	63819	50	17	26	7	32
TMR_00427	tmRNA links to Rfam database...	0.70	0.66	0.74	64	67442	25	8	14	3	33
TMR_00429	tmRNA links to Rfam database...	0.70	0.64	0.76	70	74599	24	7	15	2	39
TMR_00430	tmRNA links to Rfam database...	0.39	0.38	0.40	41	82518	64	15	47	2	68
TMR_00431	tmRNA links to Rfam database...	0.68	0.65	0.71	36	51952	44	3	12	29	19
TMR_00432	tmRNA links to Rfam database...	0.68	0.65	0.70	68	79703	34	11	18	5	36
TMR_00433	tmRNA links to Rfam database...	0.60	0.57	0.65	60	80107	34	6	27	1	46
TMR_00439	tmRNA links to Rfam database...	0.61	0.55	0.67	56	68552	32	4	23	5	45
TMR_00441	tmRNA links to Rfam database...	0.18	0.18	0.19	15	62048	70	14	51	5	68
TMR_00443	tmRNA links to Rfam database...	0.87	0.77	0.99	80	67080	1	1	0	0	24
TMR_00448	tmRNA links to Rfam database...	0.76	0.68	0.85	63	62054	11	0	11	0	29
TMR_00451	tmRNA links to Rfam database...	0.69	0.62	0.77	55	63475	16	5	11	0	34
TMR_00457	tmRNA links to Rfam database...	0.61	0.59	0.63	60	78511	38	4	31	3	42
TMR_00458	tmRNA links to Rfam database...	0.73	0.68	0.79	63	63466	18	2	15	1	30
TMR_00460	tmRNA links to Rfam database...	0.68	0.65	0.71	69	79304	31	6	22	3	37
TMR_00465	tmRNA links to Rfam database...	0.59	0.56	0.62	53	64176	33	13	19	1	41
TMR_00469	tmRNA links to Rfam database...	0.79	0.74	0.84	74	64532	14	9	5	0	26
TMR_00472	tmRNA links to Rfam database...	0.72	0.67	0.77	65	64536	23	7	12	4	32
TMR_00478	tmRNA links to Rfam database...	0.44	0.44	0.44	44	71910	58	18	38	2	55
TMR_00498	tmRNA links to Rfam database...	0.70	0.68	0.72	67	68913	26	9	17	0	32
TMR_00499	tmRNA links to Rfam database...	0.45	0.44	0.46	44	64525	57	4	47	6	55
TMR_00501	tmRNA links to Rfam database...	0.49	0.47	0.52	43	62398	42	9	31	2	49
TMR_00502	tmRNA links to Rfam database...	0.61	0.57	0.65	53	75384	32	10	19	3	40
TMR_00503	tmRNA links to Rfam database...	0.73	0.68	0.78	76	67799	28	3	18	7	35
TMR_00519	tmRNA links to Rfam database...	0.72	0.65	0.79	62	63112	19	2	14	3	33
TMR_00520	tmRNA links to Rfam database...	0.72	0.67	0.78	66	63105	28	0	19	9	33
TMR_00522	tmRNA links to Rfam database...	0.64	0.61	0.67	59	63102	37	3	26	8	38
TMR_00528	tmRNA links to Rfam database...	0.77	0.70	0.85	68	63110	12	6	6	0	29
TMR_00540	tmRNA links to Rfam database...	0.74	0.67	0.80	70	73449	19	6	11	2	34
TMR_00541	tmRNA links to Rfam database...	0.61	0.57	0.65	60	61683	38	0	33	5	45
TMR_00544	tmRNA links to Rfam database...	0.52	0.49	0.55	53	89580	48	12	31	5	55
TMR_00547	tmRNA links to Rfam database...	0.73	0.65	0.81	65	65261	17	1	14	2	35
TMR_00553	tmRNA links to Rfam database...	0.51	0.46	0.58	37	48141	31	6	21	4	44
TMR_00559	tmRNA links to Rfam database...	0.67	0.62	0.72	63	62393	25	9	16	0	38
TMR_00560	tmRNA links to Rfam database...	0.69	0.64	0.73	63	60989	23	10	13	0	35
TMR_00562	tmRNA links to Rfam database...	0.53	0.48	0.59	49	72688	42	2	32	8	53
TMR_00563	tmRNA links to Rfam database...	0.74	0.72	0.76	74	75368	33	9	15	9	29
TMR_00566	tmRNA links to Rfam database...	0.59	0.55	0.63	55	60638	36	3	30	3	45
TMR_00568	tmRNA links to Rfam database...	0.69	0.63	0.76	62	60644	22	2	18	2	37
TMR_00570	tmRNA links to Rfam database...	0.58	0.54	0.63	52	60295	35	5	26	4	45
TMR_00571	tmRNA links to Rfam database...	0.61	0.57	0.66	56	60641	35	2	27	6	43
TMR_00576	tmRNA links to Rfam database...	0.84	0.78	0.90	80	60289	12	6	3	3	22
TMR_00579	tmRNA links to Rfam database...	0.38	0.40	0.37	36	80503	74	17	45	12	54
TMR_00580	tmRNA links to Rfam database...	0.68	0.65	0.71	65	60635	29	7	19	3	35
TMR_00581	tmRNA links to Rfam database...	0.73	0.67	0.79	66	62397	23	4	14	5	32
TMR_00584	tmRNA links to Rfam database...	0.80	0.73	0.88	71	60994	14	4	6	4	26
TMR_00586	tmRNA links to Rfam database...	0.68	0.64	0.73	62	60990	26	8	15	3	35
TMR_00587	tmRNA links to Rfam database...	0.82	0.77	0.88	77	61337	11	4	7	0	23
TMR_00588	tmRNA links to Rfam database...	0.53	0.48	0.60	48	77341	41	5	27	9	53
TMR_00594	tmRNA links to Rfam database...	0.61	0.55	0.69	57	79318	30	7	19	4	47
TMR_00596	tmRNA links to Rfam database...	0.53	0.49	0.57	47	78127	45	11	25	9	48
TMR_00599	tmRNA links to Rfam database...	0.45	0.49	0.42	35	63106	62	18	31	13	37
TMR_00600	tmRNA links to Rfam database...	0.72	0.63	0.82	72	79712	18	6	10	2	43
TMR_00601	tmRNA links to Rfam database...	0.69	0.67	0.72	28	58957	55	1	10	44	14
TMR_00603	tmRNA links to Rfam database...	0.80	0.74	0.86	32	60341	49	1	4	44	11
TMR_00604	tmRNA links to Rfam database...	0.78	0.72	0.84	81	62738	16	2	14	0	31
TMR_00605	tmRNA links to Rfam database...	0.59	0.55	0.63	59	74211	39	11	24	4	49
TMR_00606	tmRNA links to Rfam database...	0.67	0.64	0.70	69	68907	35	9	21	5	38
TMR_00609	tmRNA links to Rfam database...	0.68	0.66	0.71	75	63440	31	8	23	0	38
TMR_00610	tmRNA links to Rfam database...	0.79	0.74	0.85	77	62037	21	6	8	7	27
TMR_00611	tmRNA links to Rfam database...	0.71	0.70	0.73	71	61328	26	6	20	0	31
TMR_00612	tmRNA links to Rfam database...	0.46	0.45	0.47	47	60625	54	7	47	0	57
TMR_00614	tmRNA links to Rfam database...	0.69	0.64	0.74	67	60984	30	2	22	6	37
TMR_00615	tmRNA links to Rfam database...	0.78	0.72	0.84	69	63821	18	7	6	5	27
TMR_00616	tmRNA links to Rfam database...	0.63	0.62	0.65	61	67067	34	8	25	1	38
TMR_00617	tmRNA links to Rfam database...	0.61	0.62	0.61	36	34657	27	9	14	4	22
TMR_00623	tmRNA links to Rfam database...	0.63	0.56	0.72	60	61342	25	2	21	2	48
TMR_00624	tmRNA links to Rfam database...	0.55	0.53	0.58	57	62383	46	7	34	5	51
TMR_00625	tmRNA links to Rfam database...	0.52	0.50	0.55	53	78907	44	12	31	1	53
TMR_00626	tmRNA links to Rfam database...	0.77	0.72	0.84	78	67803	22	6	9	7	31
TMR_00680	tmRNA links to Rfam database...	0.33	0.32	0.33	32	67800	68	12	52	4	67
TMR_00681	tmRNA links to Rfam database...	0.62	0.60	0.65	58	65977	31	4	27	0	39
TMR_00683	tmRNA links to Rfam database...	0.56	0.57	0.55	57	82925	58	13	33	12	43
TMR_00686	tmRNA links to Rfam database...	0.68	0.67	0.69	72	71148	33	11	22	0	36
TMR_00687	tmRNA links to Rfam database...	0.72	0.68	0.75	76	71530	25	9	16	0	35
TMR_00696	tmRNA links to Rfam database...	0.51	0.47	0.55	54	84980	55	7	37	11	60
TMR_00698	tmRNA links to Rfam database...	0.55	0.50	0.60	52	63104	37	3	31	3	52
TMR_00699	tmRNA links to Rfam database...	0.80	0.75	0.85	76	67072	13	3	10	0	26
TMR_00702	tmRNA links to Rfam database...	0.77	0.71	0.84	71	67076	14	4	10	0	29
TMR_00703	tmRNA links to Rfam database...	0.84	0.76	0.94	75	67448	5	1	4	0	24
TMR_00706	tmRNA links to Rfam database...	0.61	0.52	0.70	54	66353	23	3	20	0	49
TMR_00711	tmRNA links to Rfam database...	0.45	0.44	0.46	43	67802	53	11	40	2	55
TMR_00712	tmRNA links to Rfam database...	0.61	0.57	0.66	62	78512	40	1	31	8	47
TMR_00716	tmRNA links to Rfam database...	0.60	0.55	0.65	55	62751	33	1	28	4	45

^top

Performance of RNAfold - scored lower in this pairwise comparison

1. Total counts & total scores for RNAfold

Total Base Pair Counts
Total TP	70922
Total TN	433135283
Total FP	123968
Total FP CONTRA	17492
Total FP INCONS	86311
Total FP COMP	20165
Total FN	102726

Total Scores
MCC	0.407
Average MCC ± 95% Confidence Intervals	0.445 ± 0.012
Sensitivity	0.408
Positive Predictive Value	0.406
Nr of predictions	910

^top

2. Individual counts for RNAfold [ download as .csv ]

RNA Chain	Rfam family	MCC	SENS	PPV	TP	TN	FP	FP CONTRA	FP INCONS	FP COMP	FN
ASE_00001	RNaseP_arch links to Rfam database...	0.62	0.61	0.63	46	34118	34	3	24	7	29
ASE_00002	RNaseP_arch links to Rfam database...	0.64	0.62	0.67	45	35444	27	2	20	5	28
ASE_00004	RNaseP_bact_a links to Rfam database...	0.70	0.70	0.71	68	47799	30	9	19	2	29
ASE_00005	RNaseP_bact_a links to Rfam database...	0.63	0.58	0.68	68	57870	37	0	32	5	49
ASE_00006	RNaseP_bact_a links to Rfam database...	0.62	0.62	0.62	58	47493	38	7	28	3	35
ASE_00007	RNaseP_bact_a links to Rfam database...	0.57	0.55	0.60	60	59585	44	2	38	4	50
ASE_00009	RNaseP_arch links to Rfam database...	0.78	0.75	0.82	50	26045	14	0	11	3	17
ASE_00012	RNaseP_bact_a links to Rfam database...	0.58	0.54	0.62	67	73812	49	2	39	8	56
ASE_00014	RNaseP_arch links to Rfam database...	0.24	0.25	0.24	26	54178	82	8	73	1	80
ASE_00017	RNaseP_nuc links to Rfam database...	0.26	0.28	0.24	18	50966	73	6	50	17	46
ASE_00018	RNaseP_bact_a links to Rfam database...	0.80	0.76	0.84	102	80479	22	3	17	2	32
ASE_00020	RNaseP_bact_a links to Rfam database...	0.56	0.54	0.59	68	73804	48	8	40	0	58
ASE_00021	RNaseP_bact_a links to Rfam database...	0.60	0.54	0.65	87	104063	52	4	42	6	73
ASE_00022	RNaseP_bact_b links to Rfam database...	0.46	0.44	0.48	55	82914	66	6	53	7	69
ASE_00023	RNaseP_bact_a links to Rfam database...	0.64	0.64	0.65	81	84131	47	5	38	4	46
ASE_00025	RNaseP_nuc links to Rfam database...	0.23	0.24	0.22	17	78527	117	12	50	55	54
ASE_00026	RNaseP_bact_a links to Rfam database...	0.53	0.51	0.54	56	59582	55	1	46	8	54
ASE_00028	RNaseP_bact_b links to Rfam database...	0.61	0.59	0.64	74	84550	51	9	33	9	52
ASE_00029	RNaseP_bact_a links to Rfam database...	0.57	0.54	0.61	66	82920	49	4	38	7	56
ASE_00030	RNaseP_bact_a links to Rfam database...	0.66	0.63	0.68	92	85356	44	3	40	1	53
ASE_00031	RNaseP_bact_a links to Rfam database...	0.55	0.55	0.56	69	86613	59	4	50	5	57
ASE_00032	RNaseP_bact_a links to Rfam database...	0.55	0.53	0.57	63	80090	53	5	42	6	55
ASE_00033	RNaseP_bact_a links to Rfam database...	0.35	0.32	0.38	39	64877	66	7	57	2	82
ASE_00035	RNaseP_bact_a links to Rfam database...	0.30	0.28	0.32	33	70398	76	12	57	7	85
ASE_00036	RNaseP_bact_a links to Rfam database...	0.53	0.50	0.57	66	75739	57	5	45	7	66
ASE_00037	RNaseP_bact_a links to Rfam database...	0.49	0.46	0.52	51	59242	50	2	45	3	59
ASE_00038	RNaseP_bact_a links to Rfam database...	0.54	0.53	0.55	54	53529	46	4	41	1	47
ASE_00040	RNaseP_bact_a links to Rfam database...	0.49	0.47	0.51	63	78879	67	5	56	6	70
ASE_00041	RNaseP_bact_a links to Rfam database...	0.53	0.51	0.55	55	57530	50	2	43	5	53
ASE_00042	RNaseP_bact_a links to Rfam database...	0.53	0.50	0.56	72	89971	58	4	53	1	73
ASE_00044	RNaseP_bact_a links to Rfam database...	0.69	0.68	0.70	71	54513	35	3	28	4	34
ASE_00046	RNaseP_bact_a links to Rfam database...	0.62	0.57	0.67	59	50315	29	2	27	0	44
ASE_00047	RNaseP_bact_a links to Rfam database...	0.41	0.39	0.44	51	74189	66	4	61	1	79
ASE_00052	RNaseP_bact_a links to Rfam database...	0.50	0.46	0.55	52	61330	48	2	41	5	60
ASE_00053	RNaseP_bact_a links to Rfam database...	0.50	0.47	0.52	63	79280	62	5	53	4	70
ASE_00056	-	0.77	0.72	0.81	52	30812	20	2	10	8	20
ASE_00057	RNaseP_bact_a links to Rfam database...	0.62	0.60	0.64	80	82090	50	8	37	5	54
ASE_00064	RNaseP_bact_a links to Rfam database...	0.43	0.43	0.44	38	45364	53	5	44	4	51
ASE_00066	RNaseP_bact_a links to Rfam database...	0.67	0.64	0.71	83	72273	35	4	30	1	47
ASE_00068	RNaseP_bact_a links to Rfam database...	0.51	0.48	0.53	41	37598	37	4	32	1	44
ASE_00069	RNaseP_bact_a links to Rfam database...	0.67	0.64	0.70	90	82899	46	5	34	7	50
ASE_00074	RNaseP_bact_a links to Rfam database...	0.58	0.57	0.59	68	67780	49	6	42	1	51
ASE_00075	RNaseP_bact_a links to Rfam database...	0.61	0.56	0.68	90	108678	49	3	40	6	72
ASE_00076	RNaseP_bact_a links to Rfam database...	0.54	0.51	0.57	60	68160	48	5	40	3	58
ASE_00077	RNaseP_bact_a links to Rfam database...	0.51	0.51	0.52	44	45065	41	6	35	0	42
ASE_00078	RNaseP_bact_a links to Rfam database...	0.68	0.67	0.68	56	42989	31	5	21	5	27
ASE_00079	RNaseP_bact_a links to Rfam database...	0.41	0.39	0.42	39	55519	53	3	50	0	61
ASE_00080	RNaseP_bact_a links to Rfam database...	0.47	0.45	0.49	55	71519	60	5	52	3	68
ASE_00081	RNaseP_bact_a links to Rfam database...	0.55	0.55	0.55	53	49674	44	5	38	1	44
ASE_00082	RNaseP_bact_a links to Rfam database...	0.57	0.54	0.61	63	70396	55	1	40	14	53
ASE_00083	RNaseP_bact_a links to Rfam database...	0.79	0.75	0.83	83	62381	23	2	15	6	27
ASE_00084	RNaseP_bact_a links to Rfam database...	0.70	0.69	0.72	68	53533	30	6	21	3	31
ASE_00087	RNaseP_bact_a links to Rfam database...	0.67	0.61	0.74	88	88291	36	6	25	5	56
ASE_00089	-	0.29	0.28	0.30	22	31302	52	1	50	1	57
ASE_00090	RNaseP_bact_a links to Rfam database...	0.54	0.54	0.54	55	55509	51	4	43	4	46
ASE_00092	RNaseP_bact_a links to Rfam database...	0.73	0.71	0.75	80	63440	31	0	26	5	33
ASE_00096	RNaseP_bact_a links to Rfam database...	0.57	0.56	0.58	64	63436	47	4	42	1	51
ASE_00099	RNaseP_bact_a links to Rfam database...	0.51	0.50	0.53	60	64506	56	6	48	2	60
ASE_00100	RNaseP_nuc links to Rfam database...	0.20	0.22	0.19	17	82124	115	16	58	41	59
ASE_00102	RNaseP_bact_a links to Rfam database...	0.43	0.41	0.45	68	117703	87	8	76	3	98
ASE_00104	RNaseP_bact_a links to Rfam database...	0.53	0.50	0.56	60	64153	49	6	42	1	59
ASE_00105	RNaseP_bact_a links to Rfam database...	0.40	0.39	0.41	43	64155	65	13	50	2	68
ASE_00107	RNaseP_bact_a links to Rfam database...	0.40	0.39	0.42	49	73036	71	3	65	3	78
ASE_00108	RNaseP_nuc links to Rfam database...	0.38	0.40	0.37	25	46903	77	9	34	34	38
ASE_00111	RNaseP_nuc links to Rfam database...	0.24	0.32	0.19	18	49990	85	36	42	7	39
ASE_00112	RNaseP_bact_a links to Rfam database...	0.78	0.73	0.83	85	75363	26	5	13	8	31
ASE_00115	RNaseP_bact_a links to Rfam database...	0.47	0.46	0.48	46	54519	58	1	49	8	55
ASE_00116	RNaseP_arch links to Rfam database...	0.20	0.20	0.20	13	31560	56	2	51	3	53
ASE_00118	RNaseP_bact_a links to Rfam database...	0.52	0.52	0.53	53	60626	49	7	40	2	49
ASE_00119	RNaseP_bact_a links to Rfam database...	0.67	0.65	0.69	70	62734	33	1	30	2	38
ASE_00120	RNaseP_arch links to Rfam database...	0.39	0.37	0.40	35	46884	52	10	42	0	59
ASE_00121	RNaseP_arch links to Rfam database...	0.25	0.25	0.26	23	45060	67	5	62	0	69
ASE_00122	RNaseP_bact_a links to Rfam database...	0.28	0.27	0.29	24	43283	59	4	54	1	64
ASE_00123	RNaseP_bact_a links to Rfam database...	0.56	0.54	0.59	46	38425	37	2	30	5	39
ASE_00125	RNaseP_bact_a links to Rfam database...	0.64	0.63	0.65	55	39255	31	4	26	1	33
ASE_00126	RNaseP_bact_a links to Rfam database...	0.75	0.77	0.74	63	40385	26	3	19	4	19
ASE_00128	RNaseP_bact_a links to Rfam database...	0.74	0.71	0.77	71	53209	28	2	19	7	29
ASE_00129	RNaseP_bact_a links to Rfam database...	0.52	0.50	0.53	56	62730	53	5	44	4	55
ASE_00131	RNaseP_bact_a links to Rfam database...	0.63	0.55	0.71	47	39274	29	0	19	10	38
ASE_00132	RNaseP_bact_a links to Rfam database...	0.64	0.63	0.65	60	50311	34	7	25	2	35
ASE_00134	RNaseP_bact_a links to Rfam database...	0.37	0.38	0.36	36	50304	63	5	58	0	59
ASE_00135	RNaseP_bact_a links to Rfam database...	0.46	0.45	0.47	49	63085	60	8	48	4	60
ASE_00136	RNaseP_bact_a links to Rfam database...	0.61	0.61	0.62	56	48114	39	6	29	4	36
ASE_00137	RNaseP_bact_a links to Rfam database...	0.44	0.43	0.45	42	48423	53	4	47	2	56
ASE_00138	RNaseP_bact_a links to Rfam database...	0.53	0.52	0.55	42	40393	35	4	31	0	39
ASE_00139	RNaseP_bact_a links to Rfam database...	0.83	0.77	0.89	80	54195	15	2	8	5	24
ASE_00140	RNaseP_bact_a links to Rfam database...	0.71	0.66	0.76	82	70768	28	4	22	2	43
ASE_00142	RNaseP_bact_a links to Rfam database...	0.75	0.71	0.80	87	67052	26	4	18	4	35
ASE_00145	RNaseP_arch links to Rfam database...	0.46	0.46	0.46	51	70013	69	6	55	8	60
ASE_00146	RNaseP_bact_a links to Rfam database...	0.51	0.46	0.56	57	70774	48	0	45	3	67
ASE_00148	RNaseP_arch links to Rfam database...	0.70	0.67	0.73	103	112434	42	4	34	4	51
ASE_00151	RNaseP_bact_a links to Rfam database...	0.28	0.27	0.29	26	51914	63	11	52	0	72
ASE_00153	RNaseP_nuc links to Rfam database...	0.61	0.62	0.61	45	57556	72	2	27	43	28
ASE_00154	RNaseP_arch links to Rfam database...	0.63	0.63	0.64	67	65236	42	4	34	4	40
ASE_00155	RNaseP_arch links to Rfam database...	0.51	0.50	0.52	71	93391	71	10	56	5	71
ASE_00163	RNaseP_bact_a links to Rfam database...	0.64	0.63	0.66	59	53211	42	4	27	11	34
ASE_00165	RNaseP_bact_a links to Rfam database...	0.57	0.55	0.60	56	52881	39	12	26	1	45
ASE_00168	RNaseP_nuc links to Rfam database...	0.16	0.20	0.14	13	60630	100	24	59	17	51
ASE_00169	RNaseP_bact_a links to Rfam database...	0.51	0.50	0.52	53	57190	52	7	41	4	54
ASE_00170	RNaseP_bact_a links to Rfam database...	0.70	0.68	0.72	63	48740	26	2	23	1	30
ASE_00171	RNaseP_bact_a links to Rfam database...	0.59	0.60	0.59	56	48421	40	9	30	1	38
ASE_00172	RNaseP_bact_a links to Rfam database...	0.69	0.69	0.70	73	58892	36	6	25	5	33
ASE_00174	RNaseP_bact_a links to Rfam database...	0.52	0.51	0.53	56	60970	51	6	43	2	53
ASE_00175	RNaseP_bact_a links to Rfam database...	0.61	0.61	0.61	65	59925	42	7	34	1	42
ASE_00176	RNaseP_bact_a links to Rfam database...	0.59	0.55	0.63	61	59934	39	5	31	3	49
ASE_00179	RNaseP_bact_a links to Rfam database...	0.64	0.65	0.62	55	44164	34	7	27	0	29
ASE_00180	RNaseP_bact_a links to Rfam database...	0.72	0.69	0.75	69	51268	29	2	21	6	31
ASE_00181	RNaseP_bact_a links to Rfam database...	0.54	0.53	0.54	56	57527	51	3	44	4	50
ASE_00182	RNaseP_bact_a links to Rfam database...	0.48	0.46	0.50	63	84128	67	6	58	3	73
ASE_00183	RNaseP_bact_a links to Rfam database...	0.72	0.71	0.73	80	61316	34	2	27	5	33
ASE_00184	RNaseP_bact_a links to Rfam database...	0.62	0.63	0.62	64	54511	40	10	30	0	38
ASE_00185	RNaseP_bact_a links to Rfam database...	0.80	0.76	0.84	97	73421	25	3	15	7	31
ASE_00186	RNaseP_bact_a links to Rfam database...	0.74	0.70	0.79	92	78886	30	3	22	5	40
ASE_00187	RNaseP_arch links to Rfam database...	0.51	0.50	0.52	57	68526	57	7	45	5	58
ASE_00189	RNaseP_bact_b links to Rfam database...	0.58	0.55	0.61	56	63098	41	9	27	5	46
ASE_00190	RNaseP_bact_b links to Rfam database...	0.50	0.48	0.52	43	45368	44	2	38	4	47
ASE_00192	RNaseP_bact_b links to Rfam database...	0.49	0.47	0.51	62	84544	66	10	50	6	71
ASE_00194	RNaseP_bact_b links to Rfam database...	0.46	0.45	0.47	53	73423	64	8	52	4	66
ASE_00195	-	0.59	0.58	0.61	77	86193	55	3	47	5	56
ASE_00196	RNaseP_arch links to Rfam database...	0.75	0.73	0.76	55	31554	21	2	15	4	20
ASE_00197	RNaseP_bact_a links to Rfam database...	0.49	0.46	0.52	67	89123	66	4	59	3	78
ASE_00198	RNaseP_bact_a links to Rfam database...	0.65	0.65	0.66	66	52550	34	6	28	0	36
ASE_00203	RNaseP_bact_a links to Rfam database...	0.66	0.66	0.67	63	46571	31	6	25	0	33
ASE_00204	RNaseP_bact_b links to Rfam database...	0.64	0.60	0.68	67	67797	37	7	25	5	45
ASE_00205	RNaseP_arch links to Rfam database...	0.44	0.43	0.44	39	45968	56	4	45	7	51
ASE_00209	RNaseP_arch links to Rfam database...	0.39	0.38	0.41	33	42990	48	5	43	0	55
ASE_00210	RNaseP_arch links to Rfam database...	0.59	0.60	0.59	39	27195	28	6	21	1	26
ASE_00212	RNaseP_bact_a links to Rfam database...	0.53	0.51	0.55	76	93822	67	5	58	4	72
ASE_00213	RNaseP_arch links to Rfam database...	0.70	0.70	0.70	46	27195	21	6	14	1	20
ASE_00214	RNaseP_bact_a links to Rfam database...	0.80	0.79	0.81	81	56180	27	3	16	8	22
ASE_00215	RNaseP_bact_a links to Rfam database...	0.54	0.51	0.57	50	48429	39	4	33	2	49
ASE_00216	RNaseP_bact_a links to Rfam database...	0.63	0.62	0.63	51	39259	32	7	23	2	31
ASE_00217	RNaseP_bact_a links to Rfam database...	0.30	0.29	0.32	26	40388	60	6	50	4	64
ASE_00221	RNaseP_bact_a links to Rfam database...	0.58	0.53	0.64	62	64523	38	3	32	3	55
ASE_00222	RNaseP_arch links to Rfam database...	0.64	0.62	0.66	97	111953	53	9	42	2	60
ASE_00227	RNaseP_bact_a links to Rfam database...	0.30	0.29	0.32	38	78884	81	6	75	0	95
ASE_00228	RNaseP_bact_a links to Rfam database...	0.60	0.60	0.59	52	46883	36	14	22	0	34
ASE_00229	RNaseP_bact_a links to Rfam database...	0.60	0.60	0.61	52	42401	33	10	23	0	35
ASE_00231	RNaseP_bact_a links to Rfam database...	0.69	0.69	0.70	66	47801	28	5	23	0	30
ASE_00232	RNaseP_bact_a links to Rfam database...	0.59	0.58	0.60	49	38421	35	3	30	2	35
ASE_00234	RNaseP_bact_a links to Rfam database...	0.58	0.53	0.63	68	75358	45	5	35	5	61
ASE_00237	RNaseP_nuc links to Rfam database...	0.00	0.00	0.00	0	45675	95	25	53	17	56
ASE_00238	RNaseP_bact_a links to Rfam database...	0.62	0.61	0.63	70	64150	46	2	39	5	44
ASE_00240	RNaseP_bact_a links to Rfam database...	0.64	0.62	0.66	58	46577	37	2	28	7	35
ASE_00241	RNaseP_bact_a links to Rfam database...	0.60	0.60	0.61	52	43871	34	7	26	1	35
ASE_00242	RNaseP_bact_a links to Rfam database...	0.72	0.68	0.76	76	60975	27	3	21	3	36
ASE_00246	RNaseP_nuc links to Rfam database...	0.28	0.31	0.26	21	48123	72	17	44	11	46
ASE_00247	RNaseP_nuc links to Rfam database...	0.18	0.19	0.17	12	54213	88	16	44	28	52
ASE_00248	RNaseP_bact_a links to Rfam database...	0.47	0.43	0.51	49	62384	48	3	45	0	65
ASE_00250	RNaseP_bact_a links to Rfam database...	0.61	0.59	0.64	77	78882	47	4	40	3	54
ASE_00252	RNaseP_bact_a links to Rfam database...	0.62	0.59	0.65	99	115287	58	4	50	4	69
ASE_00254	RNaseP_bact_a links to Rfam database...	0.74	0.72	0.77	59	36779	24	5	13	6	23
ASE_00255	RNaseP_bact_a links to Rfam database...	0.47	0.45	0.50	59	74572	60	7	53	0	71
ASE_00257	RNaseP_bact_a links to Rfam database...	0.64	0.64	0.64	62	50943	35	1	34	0	35
ASE_00259	RNaseP_bact_a links to Rfam database...	0.35	0.33	0.36	40	73043	71	8	62	1	81
ASE_00263	RNaseP_bact_a links to Rfam database...	0.62	0.62	0.62	74	70380	47	5	41	1	46
ASE_00264	RNaseP_nuc links to Rfam database...	0.84	0.78	0.90	78	49054	24	0	9	15	22
ASE_00267	RNaseP_bact_a links to Rfam database...	0.32	0.31	0.34	27	45070	61	5	48	8	61
ASE_00270	RNaseP_bact_a links to Rfam database...	0.64	0.63	0.66	81	72267	43	8	34	1	47
ASE_00274	RNaseP_bact_a links to Rfam database...	0.48	0.47	0.51	48	55516	47	7	40	0	55
ASE_00277	RNaseP_bact_a links to Rfam database...	0.38	0.38	0.38	35	48113	59	9	48	2	56
ASE_00279	RNaseP_bact_a links to Rfam database...	0.70	0.66	0.74	67	53210	28	0	24	4	34
ASE_00280	RNaseP_bact_a links to Rfam database...	0.37	0.37	0.38	36	51908	62	6	53	3	62
ASE_00281	RNaseP_bact_a links to Rfam database...	0.60	0.56	0.64	49	44475	34	3	24	7	39
ASE_00282	RNaseP_bact_a links to Rfam database...	0.42	0.42	0.43	53	77692	70	6	64	0	74
ASE_00283	RNaseP_bact_a links to Rfam database...	0.73	0.69	0.76	74	61679	28	4	19	5	33
ASE_00284	RNaseP_bact_a links to Rfam database...	0.63	0.61	0.65	66	58209	42	4	32	6	42
ASE_00285	RNaseP_bact_a links to Rfam database...	0.71	0.67	0.75	82	68897	35	2	25	8	40
ASE_00286	RNaseP_bact_a links to Rfam database...	0.43	0.42	0.43	39	46574	61	3	49	9	53
ASE_00287	RNaseP_bact_a links to Rfam database...	0.72	0.67	0.77	69	54856	30	2	19	9	34
ASE_00288	RNaseP_bact_a links to Rfam database...	0.32	0.31	0.33	29	45968	60	5	54	1	64
ASE_00289	RNaseP_bact_a links to Rfam database...	0.66	0.62	0.70	98	100885	46	4	38	4	59
ASE_00291	-	0.37	0.36	0.39	34	48429	54	9	44	1	60
ASE_00292	RNaseP_bact_a links to Rfam database...	0.71	0.67	0.76	92	81689	34	4	25	5	46
ASE_00294	RNaseP_bact_a links to Rfam database...	0.79	0.75	0.83	128	114327	29	3	23	3	43
ASE_00295	RNaseP_bact_a links to Rfam database...	0.53	0.49	0.57	64	73808	51	5	43	3	67
ASE_00296	RNaseP_bact_a links to Rfam database...	0.27	0.26	0.29	37	91677	95	8	84	3	108
ASE_00297	RNaseP_bact_a links to Rfam database...	0.49	0.50	0.49	49	52875	53	5	46	2	49
ASE_00298	RNaseP_bact_a links to Rfam database...	0.47	0.45	0.50	51	67425	57	7	45	5	62
ASE_00299	RNaseP_bact_a links to Rfam database...	0.55	0.55	0.56	55	49357	48	8	35	5	45
ASE_00313	RNaseP_nuc links to Rfam database...	0.73	0.73	0.73	65	62392	46	6	18	22	24
ASE_00316	RNaseP_nuc links to Rfam database...	0.56	0.57	0.54	56	107777	87	13	34	40	42
ASE_00318	RNaseP_bact_b links to Rfam database...	0.63	0.60	0.65	71	80091	42	13	25	4	47
ASE_00327	RNaseP_nuc links to Rfam database...	0.77	0.75	0.80	67	57207	36	4	13	19	22
ASE_00328	RNaseP_bact_b links to Rfam database...	0.41	0.41	0.40	46	72657	74	3	65	6	66
ASE_00330	RNaseP_nuc links to Rfam database...	0.72	0.71	0.74	64	56193	43	3	20	20	26
ASE_00332	RNaseP_bact_a links to Rfam database...	0.53	0.51	0.55	71	81682	58	2	55	1	67
ASE_00335	RNaseP_bact_b links to Rfam database...	0.48	0.47	0.50	54	75357	62	5	50	7	62
ASE_00337	RNaseP_nuc links to Rfam database...	0.37	0.38	0.36	27	39266	60	5	42	13	44
ASE_00338	RNaseP_nuc links to Rfam database...	0.65	0.63	0.67	62	66338	47	4	26	17	36
ASE_00339	RNaseP_bact_a links to Rfam database...	0.53	0.52	0.53	62	80084	66	5	49	12	57
ASE_00340	RNaseP_bact_a links to Rfam database...	0.75	0.74	0.76	63	45973	29	6	14	9	22
ASE_00342	RNaseP_bact_a links to Rfam database...	0.47	0.44	0.50	51	62379	51	2	49	0	64
ASE_00343	RNaseP_bact_a links to Rfam database...	0.31	0.31	0.31	35	83322	95	9	70	16	78
ASE_00346	RNaseP_arch links to Rfam database...	0.30	0.29	0.31	28	48116	63	7	54	2	69
ASE_00353	RNaseP_bact_a links to Rfam database...	0.45	0.46	0.45	49	57860	61	11	50	0	58
ASE_00359	RNaseP_arch links to Rfam database...	0.48	0.49	0.48	39	42696	50	3	40	7	41
ASE_00360	RNaseP_arch links to Rfam database...	0.31	0.31	0.31	20	29338	51	11	34	6	45
ASE_00361	RNaseP_bact_a links to Rfam database...	0.49	0.46	0.51	59	75351	59	7	49	3	68
ASE_00362	RNaseP_bact_a links to Rfam database...	0.62	0.62	0.63	56	48116	36	6	27	3	35
ASE_00363	RNaseP_bact_a links to Rfam database...	0.54	0.55	0.53	52	51262	46	5	41	0	42
ASE_00364	RNaseP_bact_a links to Rfam database...	0.31	0.30	0.31	32	54183	74	7	63	4	73
ASE_00366	RNaseP_bact_a links to Rfam database...	0.52	0.54	0.50	53	58546	57	10	44	3	45
ASE_00367	RNaseP_bact_a links to Rfam database...	0.32	0.34	0.31	29	42978	64	8	56	0	57
ASE_00369	RNaseP_bact_a links to Rfam database...	0.68	0.67	0.69	72	55840	39	2	31	6	35
ASE_00370	RNaseP_bact_a links to Rfam database...	0.65	0.63	0.67	53	41826	27	5	21	1	31
ASE_00372	RNaseP_bact_a links to Rfam database...	0.70	0.69	0.72	69	51907	31	5	22	4	31
ASE_00374	RNaseP_bact_a links to Rfam database...	0.56	0.56	0.56	49	44763	38	8	30	0	39
ASE_00375	RNaseP_bact_a links to Rfam database...	0.57	0.54	0.60	59	60280	44	6	33	5	51
ASE_00376	RNaseP_bact_a links to Rfam database...	0.52	0.50	0.54	53	56855	48	4	41	3	52
ASE_00377	RNaseP_bact_a links to Rfam database...	0.68	0.66	0.70	71	57529	37	4	26	7	36
ASE_00379	RNaseP_bact_a links to Rfam database...	0.44	0.44	0.45	39	45969	56	7	41	8	50
ASE_00380	RNaseP_bact_a links to Rfam database...	0.46	0.44	0.48	44	54855	52	1	46	5	55
ASE_00382	RNaseP_bact_a links to Rfam database...	0.66	0.65	0.67	55	41823	30	6	21	3	29
ASE_00383	RNaseP_bact_a links to Rfam database...	0.46	0.44	0.48	46	54520	54	5	44	5	59
ASE_00384	RNaseP_bact_a links to Rfam database...	0.76	0.75	0.78	69	48427	25	3	17	5	23
ASE_00385	RNaseP_bact_a links to Rfam database...	0.42	0.43	0.41	35	41819	52	6	45	1	46
ASE_00386	RNaseP_bact_a links to Rfam database...	0.53	0.53	0.53	51	50306	51	4	42	5	45
ASE_00387	RNaseP_bact_a links to Rfam database...	0.41	0.41	0.41	43	55840	62	6	56	0	61
ASE_00388	RNaseP_bact_a links to Rfam database...	0.70	0.70	0.70	62	45665	29	2	24	3	27
ASE_00390	RNaseP_bact_a links to Rfam database...	0.47	0.46	0.49	39	42115	51	3	38	10	46
ASE_00393	RNaseP_bact_a links to Rfam database...	0.37	0.35	0.39	33	47811	57	2	49	6	60
ASE_00394	RNaseP_bact_a links to Rfam database...	0.72	0.72	0.73	67	46879	29	3	22	4	26
ASE_00395	RNaseP_bact_a links to Rfam database...	0.69	0.68	0.70	57	41535	33	2	22	9	27
ASE_00396	RNaseP_bact_a links to Rfam database...	0.41	0.41	0.40	34	41532	56	11	39	6	49
ASE_00397	RNaseP_bact_a links to Rfam database...	0.45	0.46	0.45	48	54508	59	8	51	0	57
ASE_00398	RNaseP_bact_a links to Rfam database...	0.64	0.62	0.66	64	55848	36	1	32	3	40
ASE_00400	RNaseP_bact_a links to Rfam database...	0.54	0.53	0.55	56	57868	47	2	44	1	50
ASE_00401	RNaseP_bact_a links to Rfam database...	0.54	0.56	0.53	70	76897	61	13	48	0	56
ASE_00402	RNaseP_bact_a links to Rfam database...	0.45	0.45	0.46	38	42404	50	5	39	6	47
ASE_00403	RNaseP_bact_a links to Rfam database...	0.35	0.35	0.36	37	55843	68	4	61	3	70
ASE_00404	RNaseP_bact_a links to Rfam database...	0.55	0.54	0.57	46	42990	42	0	35	7	39
ASE_00406	RNaseP_bact_a links to Rfam database...	0.71	0.69	0.74	65	48740	27	8	15	4	29
ASE_00408	-	0.50	0.48	0.52	34	32319	36	2	30	4	37
ASE_00409	-	0.47	0.48	0.45	40	40953	48	8	40	0	43
ASE_00411	RNaseP_bact_a links to Rfam database...	0.35	0.36	0.34	32	49361	62	11	51	0	57
ASE_00412	RNaseP_bact_a links to Rfam database...	0.46	0.45	0.48	47	58214	51	8	42	1	58
ASE_00413	RNaseP_bact_a links to Rfam database...	0.39	0.42	0.36	34	44457	60	14	46	0	47
ASE_00414	RNaseP_bact_a links to Rfam database...	0.23	0.23	0.23	22	46265	76	5	68	3	73
ASE_00415	RNaseP_bact_a links to Rfam database...	0.45	0.45	0.45	46	54843	59	6	51	2	57
ASE_00416	RNaseP_bact_a links to Rfam database...	0.69	0.67	0.72	85	77303	41	3	30	8	42
ASE_00417	RNaseP_arch links to Rfam database...	0.36	0.37	0.35	37	54508	73	10	60	3	63
ASE_00418	RNaseP_arch links to Rfam database...	0.20	0.21	0.20	16	38700	67	12	53	2	59
ASE_00419	RNaseP_bact_a links to Rfam database...	0.74	0.72	0.77	74	54850	26	5	17	4	29
ASE_00422	RNaseP_bact_a links to Rfam database...	0.70	0.68	0.72	64	46882	33	5	20	8	30
ASE_00423	RNaseP_bact_a links to Rfam database...	0.55	0.54	0.55	59	56846	51	7	41	3	50
ASE_00426	RNaseP_bact_a links to Rfam database...	0.61	0.58	0.64	63	60976	37	7	29	1	45
ASE_00428	RNaseP_bact_a links to Rfam database...	0.53	0.51	0.55	64	76520	56	5	47	4	61
ASE_00429	-	0.39	0.38	0.41	25	28142	44	1	35	8	41
ASE_00430	RNaseP_bact_a links to Rfam database...	0.63	0.62	0.65	60	46879	40	5	27	8	37
ASE_00431	RNaseP_bact_a links to Rfam database...	0.52	0.49	0.55	47	46275	43	7	31	5	48
ASE_00434	RNaseP_bact_b links to Rfam database...	0.57	0.55	0.58	61	68160	52	8	36	8	49
ASE_00437	RNaseP_bact_a links to Rfam database...	0.42	0.40	0.44	54	79277	70	4	66	0	81
ASE_00438	RNaseP_bact_a links to Rfam database...	0.50	0.47	0.53	55	65963	48	4	44	0	61
ASE_00441	RNaseP_bact_a links to Rfam database...	0.78	0.74	0.81	83	64159	31	3	16	12	29
ASE_00447	RNaseP_bact_a links to Rfam database...	0.49	0.47	0.51	54	60273	56	1	50	5	62
ASE_00448	RNaseP_bact_a links to Rfam database...	0.22	0.22	0.23	25	64150	92	6	80	6	87
ASE_00451	RNaseP_bact_a links to Rfam database...	0.49	0.46	0.52	58	70765	56	3	50	3	67
CRW_00001	-	0.51	0.51	0.52	107	3173733	675	17	83	575	102
CRW_00002	-	0.50	0.49	0.50	130	408802	144	31	97	16	134
CRW_00004	-	0.51	0.52	0.49	68	154152	107	14	56	37	63
CRW_00005	-	0.56	0.56	0.55	74	137941	87	13	47	27	58
CRW_00007	-	0.27	0.30	0.25	40	144831	125	31	89	5	93
CRW_00009	-	0.58	0.59	0.57	82	137932	83	9	52	22	56
CRW_00010	-	0.80	0.79	0.80	100	102706	43	6	19	18	26
CRW_00011	-	0.66	0.68	0.65	94	118196	62	7	44	11	44
CRW_00012	-	0.37	0.40	0.35	57	146988	114	28	80	6	84
CRW_00013	Intron_gpI links to Rfam database...	0.21	0.22	0.21	25	103623	116	12	80	24	90
CRW_00014	-	0.39	0.38	0.39	47	103621	83	11	61	11	76
CRW_00016	Intron_gpI links to Rfam database...	0.64	0.62	0.67	74	77311	47	5	31	11	46
CRW_00017	-	0.31	0.34	0.29	31	92128	102	23	53	26	60
CRW_00018	-	0.55	0.60	0.49	73	182562	113	37	38	38	48
CRW_00019	-	0.76	0.78	0.74	107	127620	46	12	26	8	30
CRW_00024	SSU_rRNA_archaea links to Rfam database...	0.78	0.76	0.79	350	1085158	132	17	76	39	108
CRW_00034	SSU_rRNA_bacteria links to Rfam database...	0.63	0.63	0.63	300	1141838	201	31	147	23	174
CRW_00048	SSU_rRNA_bacteria links to Rfam database...	0.35	0.35	0.36	164	1170755	315	33	263	19	306
CRW_00054	SSU_rRNA_bacteria links to Rfam database...	0.53	0.52	0.54	238	1107379	215	34	165	16	218
CRW_00059	SSU_rRNA_bacteria links to Rfam database...	0.60	0.60	0.61	283	1172280	205	23	160	22	190
CRW_00061	SSU_rRNA_bacteria links to Rfam database...	0.53	0.53	0.53	252	1181474	240	37	190	13	224
CRW_00068	SSU_rRNA_bacteria links to Rfam database...	0.46	0.46	0.46	210	1108845	266	27	223	16	247
CRW_00096	SSU_rRNA_bacteria links to Rfam database...	0.47	0.47	0.47	220	1178412	266	29	219	18	245
CRW_00140	SSU_rRNA_bacteria links to Rfam database...	0.59	0.58	0.59	270	1135819	209	32	157	20	193
CRW_00141	SSU_rRNA_bacteria links to Rfam database...	0.59	0.58	0.61	277	1201568	204	13	167	24	199
CRW_00150	SSU_rRNA_bacteria links to Rfam database...	0.39	0.38	0.39	179	1152463	296	36	243	17	287
CRW_00152	SSU_rRNA_bacteria links to Rfam database...	0.54	0.53	0.55	249	1179962	229	32	173	24	222
CRW_00166	SSU_rRNA_bacteria links to Rfam database...	0.47	0.46	0.47	217	1190733	262	26	220	16	251
CRW_00173	SSU_rRNA_bacteria links to Rfam database...	0.29	0.29	0.29	131	1082204	330	37	284	9	314
CRW_00177	SSU_rRNA_bacteria links to Rfam database...	0.42	0.42	0.42	197	1178408	288	34	241	13	276
CRW_00196	SSU_rRNA_bacteria links to Rfam database...	0.44	0.44	0.44	208	1207762	286	29	236	21	267
CRW_00230	SSU_rRNA_bacteria links to Rfam database...	0.56	0.54	0.57	259	1198471	217	29	167	21	219
CRW_00245	SSU_rRNA_bacteria links to Rfam database...	0.39	0.39	0.39	176	1105876	287	34	242	11	277
CRW_00248	SSU_rRNA_bacteria links to Rfam database...	0.57	0.57	0.58	276	1218664	233	24	177	32	208
CRW_00250	SSU_rRNA_bacteria links to Rfam database...	0.40	0.40	0.40	190	1198454	296	51	231	14	288
CRW_00256	SSU_rRNA_bacteria links to Rfam database...	0.41	0.41	0.42	190	1192286	279	40	224	15	278
CRW_00270	SSU_rRNA_bacteria links to Rfam database...	0.38	0.37	0.40	170	1111856	279	38	222	19	285
CRW_00271	SSU_rRNA_bacteria links to Rfam database...	0.49	0.48	0.50	224	1122302	241	35	190	16	238
CRW_00273	SSU_rRNA_bacteria links to Rfam database...	0.55	0.54	0.55	240	1085168	217	29	164	24	206
CRW_00275	SSU_rRNA_bacteria links to Rfam database...	0.50	0.49	0.51	226	1114829	235	24	192	19	231
CRW_00277	SSU_rRNA_bacteria links to Rfam database...	0.37	0.37	0.37	169	1110340	304	41	245	18	284
CRW_00278	SSU_rRNA_bacteria links to Rfam database...	0.42	0.41	0.43	186	1129828	264	31	211	22	264
CRW_00279	SSU_rRNA_bacteria links to Rfam database...	0.35	0.34	0.35	157	1179973	303	36	250	17	307
CRW_00280	SSU_rRNA_bacteria links to Rfam database...	0.50	0.49	0.50	222	1117818	233	28	192	13	231
CRW_00281	SSU_rRNA_bacteria links to Rfam database...	0.30	0.30	0.29	138	1144872	346	41	290	15	326
CRW_00283	SSU_rRNA_bacteria links to Rfam database...	0.28	0.28	0.29	120	1015605	317	42	258	17	312
CRW_00284	SSU_rRNA_bacteria links to Rfam database...	0.28	0.27	0.28	124	1131316	333	36	284	13	332
CRW_00285	SSU_rRNA_bacteria links to Rfam database...	0.63	0.62	0.63	284	1117810	186	24	142	20	174
CRW_00289	SSU_rRNA_bacteria links to Rfam database...	0.39	0.38	0.40	181	1189200	291	36	236	19	295
CRW_00292	SSU_rRNA_bacteria links to Rfam database...	0.30	0.30	0.31	136	1123816	309	46	252	11	325
CRW_00294	-	0.27	0.29	0.26	168	2620251	580	99	387	94	418
CRW_00298	SSU_rRNA_eukarya links to Rfam database...	0.17	0.18	0.16	88	1620349	501	88	375	38	406
CRW_00301	SSU_rRNA_eukarya links to Rfam database...	0.30	0.31	0.29	160	1761955	447	75	313	59	359
CRW_00306	SSU_rRNA_eukarya links to Rfam database...	0.26	0.26	0.25	121	1445372	410	63	294	53	341
CRW_00310	SSU_rRNA_eukarya links to Rfam database...	0.26	0.27	0.25	143	1805381	466	88	338	40	378
CRW_00326	SSU_rRNA_eukarya links to Rfam database...	0.38	0.38	0.37	190	1627600	364	68	252	44	312
CRW_00330	SSU_rRNA_eukarya links to Rfam database...	0.31	0.32	0.30	165	1988473	454	70	307	77	352
CRW_00332	SSU_rRNA_eukarya links to Rfam database...	0.24	0.25	0.22	121	1769478	461	108	314	39	356
CRW_00333	SSU_rRNA_eukarya links to Rfam database...	0.33	0.33	0.32	171	1891953	432	77	284	71	343
CRW_00338	-	0.14	0.15	0.13	60	1052948	422	74	344	4	335
CRW_00345	SSU_rRNA_eukarya links to Rfam database...	0.35	0.36	0.33	181	1586320	404	77	293	34	317
CRW_00346	SSU_rRNA_eukarya links to Rfam database...	0.31	0.32	0.29	162	1584535	419	78	315	26	339
CRW_00348	SSU_rRNA_eukarya links to Rfam database...	0.24	0.24	0.24	123	1614984	435	64	332	39	380
CRW_00358	SSU_rRNA_eukarya links to Rfam database...	0.39	0.39	0.38	199	1674839	381	67	260	54	308
CRW_00366	SSU_rRNA_eukarya links to Rfam database...	0.35	0.36	0.33	174	1579233	393	84	262	47	308
CRW_00370	SSU_rRNA_eukarya links to Rfam database...	0.26	0.27	0.25	136	1640229	442	80	321	41	370
CRW_00371	SSU_rRNA_eukarya links to Rfam database...	0.33	0.33	0.32	166	1611391	395	72	281	42	330
CRW_00372	SSU_rRNA_eukarya links to Rfam database...	0.35	0.36	0.35	181	1625783	379	70	272	37	317
CRW_00374	-	0.44	0.45	0.43	245	2182441	411	62	257	92	305
CRW_00375	-	0.25	0.26	0.25	143	2298857	521	77	363	81	398
CRW_00379	SSU_rRNA_eukarya links to Rfam database...	0.42	0.43	0.41	227	2126398	426	63	265	98	307
CRW_00381	-	0.32	0.33	0.31	184	2303140	511	67	340	104	373
CRW_00386	SSU_rRNA_eukarya links to Rfam database...	0.25	0.27	0.24	137	1750683	473	87	349	37	378
CRW_00400	-	0.23	0.24	0.22	119	2677923	613	68	345	200	375
CRW_00403	SSU_rRNA_eukarya links to Rfam database...	0.31	0.33	0.29	154	1606000	439	76	298	65	310
CRW_00411	SSU_rRNA_eukarya links to Rfam database...	0.33	0.34	0.32	169	1614974	406	78	282	46	327
CRW_00414	SSU_rRNA_eukarya links to Rfam database...	0.28	0.29	0.27	143	1665688	437	80	314	43	352
CRW_00417	-	0.38	0.37	0.39	97	458157	160	21	128	11	165
CRW_00418	-	0.21	0.20	0.23	51	441107	179	25	147	7	209
CRW_00419	-	0.22	0.21	0.23	55	463931	187	18	162	7	210
CRW_00421	-	0.34	0.32	0.36	86	462964	166	22	131	13	180
CRW_00422	-	0.26	0.25	0.28	65	455302	185	23	145	17	198
CRW_00423	-	0.20	0.21	0.19	40	242349	175	25	142	8	149
CRW_00424	-	0.38	0.38	0.37	138	789026	258	22	210	26	225
CRW_00426	-	0.40	0.38	0.41	102	457198	158	27	119	12	163
CRW_00427	-	0.21	0.21	0.22	54	454333	207	33	161	13	207
CRW_00428	-	0.39	0.38	0.40	98	465850	158	28	119	11	162
CRW_00429	-	0.15	0.15	0.15	36	306700	204	48	152	4	197
CRW_00430	-	0.22	0.21	0.23	56	456245	198	23	166	9	210
CRW_00433	-	0.29	0.26	0.33	69	467817	147	21	121	5	194
CRW_00434	-	0.39	0.36	0.42	94	457220	142	17	115	10	169
CRW_00435	-	0.32	0.30	0.33	80	451486	161	19	140	2	185
CRW_00437	-	0.21	0.21	0.22	54	456242	201	25	169	7	206
CRW_00438	-	0.35	0.34	0.37	90	454335	166	19	137	10	178
CRW_00441	-	0.25	0.23	0.27	61	454355	169	27	138	4	201
CRW_00442	-	0.37	0.36	0.39	94	453386	156	25	123	8	167
CRW_00443	-	0.39	0.36	0.42	93	456267	151	22	108	21	167
CRW_00444	-	0.25	0.24	0.27	63	459128	178	32	138	8	200
CRW_00445	-	0.26	0.25	0.28	65	458167	180	24	147	9	200
CRW_00446	-	0.52	0.49	0.56	131	468760	121	11	94	16	134
CRW_00447	-	0.30	0.28	0.31	74	452437	184	17	148	19	186
CRW_00448	-	0.35	0.34	0.37	88	457211	166	26	121	19	173
CRW_00449	-	0.28	0.27	0.29	71	444849	178	27	149	2	189
CRW_00450	-	0.32	0.30	0.34	78	458171	169	22	132	15	184
CRW_00451	-	0.21	0.20	0.21	52	457204	203	26	164	13	212
CRW_00452	-	0.26	0.25	0.28	66	453389	185	27	146	12	196
CRW_00453	-	0.27	0.25	0.29	65	452448	171	30	133	8	196
CRW_00454	-	0.16	0.16	0.16	69	1730286	502	53	322	127	366
CRW_00456	-	0.45	0.42	0.48	112	470704	135	20	99	16	153
CRW_00457	-	0.34	0.32	0.37	85	467798	158	17	128	13	179
CRW_00458	-	0.37	0.35	0.38	93	464886	163	30	121	12	171
CRW_00459	-	0.29	0.27	0.31	72	462008	178	27	134	17	191
CRW_00460	-	0.29	0.30	0.29	162	1972537	458	68	324	66	382
CRW_00462	-	0.14	0.13	0.14	34	458165	214	27	177	10	227
CRW_00463	-	0.28	0.28	0.29	71	445794	181	25	150	6	183
CRW_00464	-	0.39	0.36	0.42	95	462015	141	15	116	10	169
CRW_00466	SSU_rRNA_bacteria links to Rfam database...	0.61	0.59	0.62	272	1116326	195	24	143	28	186
CRW_00468	-	0.50	0.51	0.50	432	4290117	467	89	347	31	423
CRW_00471	-	0.41	0.41	0.41	357	4211386	540	66	444	30	514
CRW_00474	-	0.46	0.47	0.45	390	3976749	503	71	400	32	446
CRW_00476	-	0.37	0.37	0.37	329	4278395	582	74	477	31	550
CRW_00478	-	0.42	0.43	0.42	367	4150655	526	84	415	27	496
CRW_00487	-	0.38	0.38	0.39	331	4223018	547	87	435	25	541
CRW_00488	-	0.33	0.33	0.34	292	4325352	585	75	492	18	594
CRW_00490	-	0.46	0.46	0.46	393	4144913	490	67	387	36	469
CRW_00495	-	0.38	0.37	0.38	318	4205621	538	59	452	27	540
CRW_00496	-	0.37	0.37	0.37	323	4193993	569	61	479	29	543
CRW_00499	-	0.43	0.42	0.43	375	4372526	526	74	428	24	508
CRW_00500	-	0.39	0.39	0.39	340	4205576	558	84	450	24	528
CRW_00501	-	0.43	0.43	0.43	370	4284264	528	59	435	34	498
CRW_00502	-	0.54	0.53	0.54	465	4295982	431	48	351	32	407
CRW_00503	-	0.40	0.40	0.40	345	4252125	544	72	444	28	522
CRW_00507	-	0.41	0.40	0.41	349	4173750	528	68	438	22	516
CRW_00509	-	0.44	0.44	0.43	378	4182408	523	86	406	31	489
CRW_00511	-	0.38	0.38	0.39	327	4107565	544	63	456	25	529
CRW_00512	-	0.56	0.56	0.56	455	3814893	384	73	282	29	364
CRW_00516	-	0.59	0.59	0.59	521	4272545	396	69	291	36	355
CRW_00518	-	0.27	0.27	0.28	242	4357751	646	73	562	11	642
CRW_00520	-	0.43	0.43	0.43	364	4208505	518	88	394	36	486
CRW_00521	-	0.36	0.36	0.36	300	4136295	552	86	445	21	544
CRW_00522	-	0.25	0.26	0.24	202	3642812	663	123	513	27	580
CRW_00525	-	0.25	0.27	0.23	217	4058893	747	101	614	32	596
CRW_00530	-	0.29	0.31	0.27	82	534794	236	54	165	17	186
CRW_00535	-	0.29	0.31	0.27	102	898090	299	76	202	21	226
CRW_00538	-	0.19	0.21	0.18	63	811827	305	77	208	20	237
CRW_00542	-	0.19	0.21	0.17	68	994343	375	98	246	31	249
CRW_00547	-	0.38	0.39	0.38	333	4278396	570	74	472	24	530
CRW_00579	-	0.42	0.41	0.43	380	4290100	522	62	443	17	557
CRW_00583	-	0.42	0.41	0.43	380	4290100	522	62	443	17	557
CRW_00589	SSU_rRNA_bacteria links to Rfam database...	0.18	0.18	0.18	78	1094024	373	34	324	15	367
CRW_00590	SSU_rRNA_bacteria links to Rfam database...	0.31	0.31	0.31	138	1119315	322	37	266	19	314
CRW_00591	SSU_rRNA_bacteria links to Rfam database...	0.37	0.38	0.37	168	1098447	302	42	246	14	278
CRW_00594	-	0.23	0.25	0.21	98	1028436	387	54	307	26	297
CRW_00596	-	0.23	0.24	0.22	92	1024184	347	40	280	27	294
CRW_00597	-	0.24	0.25	0.23	101	1200028	392	49	297	46	310
CRW_00598	SSU_rRNA_eukarya links to Rfam database...	0.34	0.36	0.33	177	1665684	417	76	288	53	314
CRW_00599	-	0.34	0.34	0.33	188	3754603	739	54	325	360	358
CRW_00604	-	0.52	0.57	0.48	46	411682	217	15	35	167	35
CRW_00605	-	0.41	0.41	0.40	29	183848	144	13	31	100	41
CRW_00606	-	0.66	0.64	0.69	59	559067	263	2	25	236	33
CRW_00607	-	0.54	0.55	0.53	42	536050	277	8	30	239	35
CRW_00608	-	0.65	0.63	0.67	50	35703	36	1	24	11	29
CRW_00610	Intron_gpI links to Rfam database...	0.21	0.21	0.22	17	36239	59	7	52	0	64
CRW_00611	-	0.68	0.65	0.70	49	31305	28	0	21	7	26
CRW_00612	-	0.65	0.63	0.66	59	270391	173	1	29	143	34
CRW_00613	Intron_gpI links to Rfam database...	0.65	0.60	0.70	47	34913	28	1	19	8	31
CRW_00614	Intron_gpI links to Rfam database...	0.16	0.19	0.14	11	121692	131	25	43	63	46
CRW_00615	-	0.50	0.56	0.44	46	553773	284	24	35	225	36
CRW_00616	-	0.80	0.76	0.84	84	1699146	494	2	14	478	26
CRW_00617	-	0.27	0.31	0.24	20	426343	263	19	44	200	44
CRW_00618	Intron_gpI links to Rfam database...	0.12	0.13	0.12	8	56212	82	13	47	22	53
CRW_00619	Intron_gpI links to Rfam database...	0.39	0.45	0.34	33	164929	139	28	35	76	40
CRW_00620	Intron_gpI links to Rfam database...	0.17	0.22	0.13	14	150871	157	32	58	67	49
CRW_00621	Intron_gpI links to Rfam database...	0.10	0.10	0.10	7	153109	156	13	52	91	64
CRW_00623	Intron_gpI links to Rfam database...	0.39	0.37	0.40	31	129718	114	8	38	68	52
CRW_00626	-	0.55	0.61	0.50	63	100898	77	25	39	13	41
CRW_00629	-	0.55	0.55	0.55	67	91257	56	15	39	2	55
CRW_00632	-	0.50	0.50	0.50	64	82901	69	10	53	6	64
CRW_00633	Intron_gpI links to Rfam database...	0.44	0.43	0.45	46	63444	58	13	43	2	60
CRW_00634	Intron_gpI links to Rfam database...	0.50	0.52	0.49	49	64519	57	10	42	5	45
CRW_00635	-	0.45	0.45	0.45	61	109142	84	10	65	9	76
CRW_00636	-	0.51	0.51	0.51	73	114818	74	10	59	5	70
CRW_00637	-	0.30	0.30	0.29	48	133737	125	21	97	7	110
CRW_00639	-	0.75	0.76	0.73	105	126613	54	14	24	16	33
CRW_00641	-	0.44	0.46	0.42	35	39820	57	10	38	9	41
CRW_00642	-	0.40	0.45	0.37	29	47199	58	14	36	8	36
CRW_00643	-	0.30	0.33	0.28	40	123114	116	22	80	14	82
CRW_00645	-	0.79	0.84	0.75	56	35436	29	8	11	10	11
CRW_00646	-	0.86	0.83	0.90	53	34921	24	0	6	18	11
CRW_00648	-	0.60	0.64	0.57	94	137910	74	18	53	3	54
CRW_00649	-	0.62	0.63	0.61	78	204353	120	5	44	71	46
CRW_00650	-	0.44	0.46	0.43	65	112900	87	9	76	2	77
CRW_00651	-	0.42	0.44	0.40	53	99995	86	11	69	6	68
CRW_00652	-	0.65	0.68	0.63	88	132215	74	8	44	22	42
CRW_00653	-	0.65	0.65	0.65	87	94696	50	7	40	3	47
CRW_00654	-	0.70	0.68	0.72	84	78093	38	4	29	5	40
CRW_00655	-	0.62	0.62	0.61	77	89127	51	12	37	2	47
CRW_00656	-	0.47	0.46	0.48	59	90401	70	9	56	5	70
CRW_00657	-	0.76	0.76	0.76	103	105895	36	3	29	4	33
CRW_00658	-	0.45	0.46	0.45	47	74586	62	20	38	4	55
CRW_00659	-	0.37	0.41	0.33	25	32309	55	15	36	4	36
CRW_00660	-	0.53	0.53	0.53	32	22095	31	7	21	3	28
CRW_00661	-	0.19	0.22	0.18	11	24248	53	16	35	2	40
CRW_00662	-	0.39	0.40	0.38	26	28611	50	7	36	7	39
CRW_00663	-	0.14	0.15	0.13	9	26039	60	7	51	2	52
CRW_00664	-	0.05	0.05	0.04	4	53534	93	21	69	3	74
CRW_00665	-	0.05	0.06	0.05	3	23593	58	14	43	1	45
CRW_00666	-	0.46	0.47	0.46	59	96012	76	13	57	6	67
CRW_00668	-	0.35	0.37	0.34	56	163711	126	20	91	15	94
CRW_00669	-	0.48	0.50	0.47	59	97335	69	17	50	2	60
CRW_00670	Intron_gpI links to Rfam database...	0.69	0.68	0.71	82	70009	36	9	25	2	38
CRW_00671	Intron_gpI links to Rfam database...	0.60	0.59	0.61	69	62722	49	6	38	5	48
CRW_00672	Intron_gpI links to Rfam database...	0.48	0.50	0.47	55	72273	65	19	43	3	56
CRW_00673	-	0.79	0.83	0.76	87	100014	47	22	5	20	18
CRW_00674	Intron_gpI links to Rfam database...	0.53	0.53	0.52	66	83310	62	12	48	2	58
CRW_00676	Intron_gpI links to Rfam database...	0.54	0.56	0.52	64	93406	74	17	41	16	51
CRW_00677	-	0.53	0.53	0.52	56	71902	59	13	39	7	49
CRW_00678	-	0.64	0.64	0.64	77	666315	276	10	33	233	44
CRW_00679	-	0.22	0.22	0.22	24	76525	93	14	73	6	83
CRW_00680	-	0.66	0.68	0.64	83	516507	213	8	38	167	39
CRW_00681	-	0.45	0.48	0.42	54	112920	90	19	57	14	58
CRW_00683	-	0.40	0.41	0.38	55	460177	239	20	68	151	80
CRW_00684	-	0.36	0.39	0.33	53	612010	292	37	71	184	82
CRW_00685	-	0.38	0.42	0.34	44	156951	121	20	65	36	62
CRW_00686	-	0.53	0.54	0.52	67	95137	70	8	54	8	58
CRW_00687	-	0.68	0.73	0.63	48	28604	32	8	20	4	18
CRW_00688	-	0.85	0.86	0.84	49	21887	12	0	9	3	8
CRW_00689	-	0.69	0.70	0.68	54	33590	28	11	15	2	23
CRW_00690	-	0.67	0.67	0.68	46	33343	29	5	17	7	23
CRW_00691	-	0.52	0.55	0.49	37	27185	40	4	35	1	30
CRW_00692	Intron_gpI links to Rfam database...	0.40	0.42	0.38	38	68536	66	24	37	5	52
CRW_00693	-	0.60	0.62	0.58	76	89121	66	11	45	10	46
CRW_00694	-	0.62	0.63	0.62	77	85780	54	8	40	6	45
CRW_00699	-	0.71	0.71	0.70	90	91677	40	12	27	1	36
CRW_00700	-	0.63	0.64	0.63	94	180752	86	14	41	31	53
CRW_00702	-	0.66	0.72	0.61	54	357347	206	10	24	172	21
CRW_00703	-	0.54	0.58	0.51	38	40396	43	11	25	7	28
CRW_00704	-	0.81	0.80	0.82	75	386669	196	4	12	180	19
CRW_00705	-	0.21	0.28	0.16	24	1461048	506	39	84	383	62
CRW_00706	-	0.37	0.41	0.34	24	695540	344	7	39	298	35
CRW_00708	-	0.42	0.58	0.30	38	3457009	764	60	28	676	28
CRW_00709	-	0.08	0.08	0.08	7	1728779	569	17	67	485	78
CRW_00710	-	0.66	0.65	0.67	74	1040293	374	8	28	338	40
CRW_00711	-	0.28	0.30	0.26	37	2318636	612	35	73	504	87
CRW_00712	-	0.47	0.54	0.42	58	952751	366	28	53	285	50
CRW_00713	-	0.67	0.65	0.69	66	731349	302	5	25	272	35
CRW_00714	-	0.20	0.22	0.18	24	186222	162	28	81	53	83
CRW_00715	-	0.44	0.44	0.44	46	69274	60	13	45	2	58
CRW_00716	-	0.11	0.12	0.10	11	193644	174	20	78	76	78
CRW_00717	-	0.40	0.40	0.40	59	153588	104	16	72	16	89
CRW_00718	-	0.81	0.79	0.84	150	189858	46	2	26	18	41
CRW_00719	-	0.55	0.56	0.55	51	230088	144	9	33	102	40
CRW_00720	-	0.15	0.16	0.14	15	208229	169	23	68	78	76
CRW_00721	-	0.52	0.60	0.46	41	58563	64	19	30	15	27
CRW_00723	-	0.53	0.62	0.46	46	1583209	504	28	27	449	28
CRW_00758	SSU_rRNA_eukarya links to Rfam database...	0.28	0.29	0.27	142	1640237	420	85	302	33	341
CRW_00759	SSU_rRNA_eukarya links to Rfam database...	0.21	0.22	0.20	105	1636621	473	79	340	54	376
CRW_00760	SSU_rRNA_eukarya links to Rfam database...	0.29	0.29	0.29	143	1638460	405	76	276	53	343
CRW_00761	-	0.18	0.20	0.16	95	2863836	716	107	383	226	379
CRW_00763	SSU_rRNA_bacteria links to Rfam database...	0.22	0.21	0.22	95	1215590	376	51	284	41	351
CRW_00764	-	0.06	0.07	0.06	13	252910	197	30	163	4	183
CRW_00765	-	0.44	0.44	0.45	113	452424	156	21	118	17	144
CRW_00766	-	0.22	0.22	0.23	52	440167	190	20	152	18	188
CRW_00768	-	0.50	0.48	0.51	125	471661	142	15	105	22	134
CRW_00769	-	0.39	0.37	0.42	93	451501	148	21	110	17	159
CRW_00772	SSU_rRNA_bacteria links to Rfam database...	0.25	0.24	0.25	98	945608	317	41	253	23	306
CRW_00773	-	0.34	0.34	0.33	88	451460	186	30	147	9	171
CRW_00774	-	0.27	0.27	0.28	70	488320	198	15	161	22	193
CRW_00775	-	0.12	0.13	0.11	28	314576	219	60	157	2	184
CRW_00777	-	0.24	0.25	0.23	77	719060	291	60	203	28	227
CRW_00778	SSU_rRNA_bacteria links to Rfam database...	0.23	0.22	0.23	85	1201662	341	40	238	63	299
CRW_00779	-	0.24	0.24	0.24	103	1031342	335	40	281	14	319
CRW_00780	-	0.20	0.19	0.21	49	475564	199	20	167	12	206
CRW_00781	-	0.22	0.24	0.20	109	1978513	548	78	355	115	341
CRW_00783	-	0.31	0.31	0.32	80	453377	182	16	155	11	179
CRW_00784	-	0.36	0.34	0.38	90	456253	169	22	125	22	172
CRW_00785	-	0.35	0.33	0.36	84	452443	161	27	122	12	169
CRW_00786	-	0.33	0.34	0.33	153	1946883	473	52	263	158	297
CRW_00787	-	0.23	0.24	0.22	72	646627	264	41	213	10	234
CRW_00788	-	0.28	0.30	0.26	107	1758338	471	77	228	166	254
CRW_00789	SSU_rRNA_bacteria links to Rfam database...	0.36	0.36	0.36	161	1137337	307	44	244	19	286
CRW_00790	-	0.20	0.21	0.19	93	1803562	512	60	335	117	354
CRW_00792	-	0.13	0.13	0.12	51	1581116	499	60	304	135	332
CRW_00793	-	0.33	0.34	0.33	129	1048680	326	54	213	59	248
CRW_00794	-	0.24	0.24	0.24	58	434537	202	18	165	19	188
CRW_00795	SSU_rRNA_bacteria links to Rfam database...	0.22	0.23	0.21	89	1152504	360	53	275	32	305
CRW_00796	-	0.20	0.20	0.21	47	384780	189	27	149	13	188
CRW_00797	-	0.22	0.23	0.21	79	692885	304	40	249	15	263
CRW_00800	SSU_rRNA_eukarya links to Rfam database...	0.48	0.47	0.48	223	1401508	313	43	201	69	247
CRW_00801	-	0.43	0.43	0.43	106	438270	153	32	108	13	143
CRW_00802	-	0.30	0.30	0.31	75	460080	183	33	132	18	178
CRW_00803	-	0.22	0.24	0.20	110	1952719	519	92	355	72	339
CRW_00804	-	0.32	0.32	0.31	130	1420033	399	46	246	107	273
CRW_00806	-	0.23	0.26	0.20	115	1913382	503	93	356	54	334
CRW_00807	-	0.39	0.40	0.39	158	1391544	337	46	198	93	240
CRW_00808	-	0.31	0.33	0.29	118	1301289	392	68	216	108	238
CRW_00813	-	0.13	0.15	0.11	20	530775	316	43	127	146	113
CRW_00815	-	0.54	0.54	0.54	86	159735	91	12	62	17	72
CRW_00816	-	0.36	0.38	0.34	49	143772	114	19	76	19	80
CRW_00820	-	0.57	0.58	0.55	84	136351	77	16	52	9	61
CRW_00849	SSU_rRNA_bacteria links to Rfam database...	0.48	0.48	0.48	225	1117795	263	20	220	23	245
CRW_00997	SSU_rRNA_bacteria links to Rfam database...	0.62	0.61	0.62	282	1135826	195	25	145	25	182
CRW_01134	-	0.24	0.25	0.24	105	964918	338	37	295	6	322
CRW_01153	SSU_rRNA_eukarya links to Rfam database...	0.30	0.30	0.30	149	1606023	407	50	306	51	354
CRW_01168	-	0.38	0.38	0.38	156	900739	276	35	223	18	255
CRW_01171	SSU_rRNA_eukarya links to Rfam database...	0.26	0.27	0.25	136	1593470	434	80	319	35	370
CRW_01186	-	0.29	0.30	0.29	114	836184	292	36	237	19	272
CRW_01188	-	0.16	0.17	0.16	65	837463	344	53	284	7	328
CRW_01189	-	0.18	0.19	0.18	73	862243	341	43	282	16	319
CRW_01214	-	0.29	0.29	0.29	117	931897	291	28	253	10	288
CRW_01222	-	0.25	0.25	0.25	99	912875	309	56	246	7	298
CRW_01224	-	0.36	0.35	0.37	140	912901	245	27	208	10	257
CRW_01239	-	0.21	0.21	0.21	80	840073	320	44	259	17	302
CRW_01250	-	0.24	0.24	0.24	90	781502	295	38	245	12	288
CRW_01260	-	0.14	0.14	0.14	55	912875	359	52	294	13	338
CRW_01266	-	0.25	0.26	0.25	99	818161	313	44	256	13	282
CRW_01271	-	0.33	0.34	0.33	129	827149	276	38	225	13	252
CRW_01275	-	0.35	0.35	0.34	153	1082212	314	52	239	23	279
CRW_01283	-	0.32	0.31	0.32	126	963578	281	35	227	19	283
CRW_01300	SSU_rRNA_eukarya links to Rfam database...	0.33	0.34	0.33	176	1693179	406	78	287	41	339
CRW_01314	-	0.24	0.23	0.24	95	937373	303	38	259	6	312
CRW_01343	SSU_rRNA_archaea links to Rfam database...	0.37	0.37	0.38	160	977476	278	42	223	13	274
CRW_01344	-	0.32	0.32	0.32	116	791548	261	44	203	14	250
CRW_01456	-	0.34	0.34	0.33	290	4240454	602	75	509	18	561
PDB_00005	Tymo_tRNA-like links to Rfam database...	0.88	0.79	1.00	11	935	0	0	0	0	3
PDB_00018	-	0.20	0.20	0.22	4	1017	14	2	12	0	16
PDB_00020	-	0.38	0.35	0.44	7	764	9	0	9	0	13
PDB_00041	-	0.70	0.50	1.00	6	624	0	0	0	0	6
PDB_00053	-	0.73	0.55	1.00	6	429	0	0	0	0	5
PDB_00056	-	0.93	0.88	1.00	14	616	0	0	0	0	2
PDB_00072	-	0.37	0.39	0.36	81	148017	142	17	125	0	129
PDB_00078	-	0.47	0.45	0.50	52	49665	53	6	47	0	63
PDB_00079	-	0.69	0.64	0.73	91	121647	66	8	25	33	51
PDB_00123	-	-0.01	0.00	0.00	0	4151	35	0	35	0	36
PDB_00124	-	0.59	0.50	0.71	5	489	2	0	2	0	5
PDB_00128	-	0.80	0.71	0.91	10	485	1	0	1	0	4
PDB_00134	-	0.79	0.63	1.00	5	373	0	0	0	0	3
PDB_00138	-	0.79	0.63	1.00	5	373	0	0	0	0	3
PDB_00187	-	0.39	0.41	0.38	291	3746181	565	91	390	84	425
PDB_00209	-	0.56	0.45	0.71	5	554	2	0	2	0	6
PDB_00243	-	0.71	0.58	0.88	7	622	1	0	1	0	5
PDB_00278	-	0.12	0.13	0.12	9	24899	68	5	63	0	63
PDB_00352	-	0.89	0.79	1.00	15	1210	0	0	0	0	4
PDB_00370	-	0.09	0.12	0.07	3	15179	45	12	31	2	22
PDB_00401	-	0.47	0.44	0.51	423	3996546	442	46	363	33	530
PDB_00403	-	0.48	0.50	0.47	76	124589	93	17	68	8	77
PDB_00409	-	0.25	0.29	0.21	71	688215	334	71	194	69	174
PDB_00423	-	0.24	0.23	0.25	17	26727	52	6	46	0	57
PDB_00447	-	0.44	0.39	0.52	17	7107	16	5	11	0	27
PDB_00571	tRNA links to Rfam database...	0.17	0.16	0.19	4	3300	17	6	11	0	21
PDB_00609	-	0.47	0.47	0.47	375	4156495	502	66	350	86	415
PDB_00644	-	0.36	0.37	0.35	300	4328299	606	114	440	52	520
PDB_00675	-	0.46	0.43	0.50	422	4167979	459	45	382	32	552
PDB_00701	-	0.47	0.46	0.49	50	45349	53	5	47	1	59
PDB_00703	SSU_rRNA_bacteria links to Rfam database...	0.48	0.46	0.51	228	1073395	247	19	203	25	267
PDB_00704	-	0.49	0.46	0.52	443	4249214	445	55	358	32	530
PDB_00713	-	0.43	0.43	0.45	9	1996	11	0	11	0	12
PDB_00716	HDV_ribozyme links to Rfam database...	-0.01	0.00	0.00	0	2678	24	1	22	1	23
PDB_00747	-	0.73	0.66	0.80	53	24465	13	0	13	0	27
PDB_00804	-	0.22	0.24	0.21	12	15342	48	10	36	2	38
PDB_00805	-	0.65	0.64	0.67	192	467742	117	17	77	23	110
PDB_00827	Intron_gpI links to Rfam database...	0.50	0.46	0.55	37	26961	31	1	29	1	44
PDB_00828	Purine links to Rfam database...	0.88	0.78	1.00	21	2464	0	0	0	0	6
PDB_00829	Purine links to Rfam database...	0.86	0.75	1.00	18	2260	0	0	0	0	6
PDB_00842	-	0.79	0.63	1.00	5	373	0	0	0	0	3
PDB_00851	-	0.44	0.39	0.50	16	4721	16	0	16	0	25
PDB_00854	SSU_rRNA_bacteria links to Rfam database...	0.52	0.51	0.53	274	1500261	287	30	213	44	261
PDB_00857	-	0.54	0.40	0.75	6	1073	2	0	2	0	9
PDB_00874	-	0.10	0.10	0.14	2	932	12	2	10	0	18
PDB_00886	-	-0.01	0.00	0.00	0	4148	38	0	38	0	40
PDB_00917	-	0.49	0.47	0.51	45	35157	49	4	39	6	50
PDB_00918	-	0.75	0.57	1.00	4	321	0	0	0	0	3
PDB_00919	RNaseP_bact_a links to Rfam database...	0.50	0.48	0.53	49	44160	47	3	41	3	54
PDB_00947	-	0.52	0.53	0.51	396	4310738	529	59	323	147	353
PDB_00993	-	0.45	0.45	0.45	359	3923411	496	60	371	65	443
PDB_01009	tRNA links to Rfam database...	0.52	0.57	0.48	12	2460	13	5	8	0	9
PDB_01020	Purine links to Rfam database...	0.86	0.74	1.00	17	2261	1	0	0	1	6
PDB_01040	-	0.30	0.30	0.33	6	1110	12	0	12	0	14
PDB_01059	-	0.75	0.57	1.00	4	227	0	0	0	0	3
PDB_01070	-	0.14	0.13	0.16	7	12675	39	1	37	1	47
PDB_01073	SAM links to Rfam database...	0.75	0.65	0.88	22	4346	4	0	3	1	12
PDB_01088	SSU_rRNA_bacteria links to Rfam database...	0.37	0.36	0.38	196	1470957	345	47	270	28	351
PDB_01089	-	0.35	0.36	0.34	276	4053315	614	112	425	77	483
PDB_01092	glmS links to Rfam database...	0.71	0.63	0.80	33	10112	10	1	7	2	19
PDB_01103	SSU_rRNA_bacteria links to Rfam database...	0.54	0.52	0.55	295	1605991	270	35	207	28	267
PDB_01105	SSU_rRNA_bacteria links to Rfam database...	0.48	0.47	0.49	254	1433456	289	27	234	28	286
PDB_01120	SSU_rRNA_bacteria links to Rfam database...	0.45	0.43	0.47	228	1204646	269	31	223	15	299
PDB_01129	-	0.27	0.28	0.26	20	35434	62	16	41	5	51
PDB_01140	-	0.49	0.47	0.50	438	4176622	489	50	385	54	492
PDB_01157	-	0.29	0.29	0.30	28	49993	65	9	56	0	70
PDB_01166	-	0.40	0.39	0.42	82	181911	117	22	91	4	130
PDB_01194	-	-0.02	0.00	0.00	0	488	8	0	8	0	15
PDB_01201	-	0.85	0.73	1.00	16	1112	0	0	0	0	6
PDB_01203	-	0.71	0.63	0.80	12	1161	3	2	1	0	7
PDB_01250	-	0.10	0.10	0.10	4	12051	35	3	32	0	37
PDB_01260	-	0.56	0.48	0.67	12	1812	6	0	6	0	13
PDB_01261	-	0.50	0.45	0.55	152	467750	130	4	122	4	184
PDB_01273	SSU_rRNA_bacteria links to Rfam database...	0.49	0.47	0.50	232	1117800	256	26	202	28	259
PDB_01281	-	-0.03	0.00	0.00	0	366	12	0	12	0	14
PDB_01299	-	0.74	0.67	0.83	10	891	2	1	1	0	5
PDB_01309	-	-0.01	0.00	0.00	0	9118	62	9	53	0	39
RFA_00597	Telomerase-vert links to Rfam database...	0.49	0.50	0.49	54	97793	83	5	51	27	55
RFA_00598	Telomerase-vert links to Rfam database...	0.61	0.59	0.63	60	84570	63	6	30	27	41
RFA_00599	Telomerase-vert links to Rfam database...	0.66	0.70	0.63	78	101351	65	17	29	19	33
RFA_00600	Telomerase-vert links to Rfam database...	0.63	0.70	0.56	70	120170	90	29	26	35	30
RFA_00601	Telomerase-vert links to Rfam database...	0.47	0.49	0.44	56	99109	88	22	48	18	58
RFA_00602	Telomerase-vert links to Rfam database...	0.52	0.55	0.50	64	101347	87	16	48	23	52
RFA_00632	HDV_ribozyme links to Rfam database...	0.38	0.39	0.37	11	4065	19	2	17	0	17
RFA_00636	HDV_ribozyme links to Rfam database...	0.42	0.43	0.43	12	3977	16	2	14	0	16
RFA_00767	Corona_pk3 links to Rfam database...	0.63	0.56	0.71	10	1877	4	0	4	0	8
RFA_00768	Corona_pk3 links to Rfam database...	0.48	0.44	0.53	8	1876	7	1	6	0	10
RFA_00769	Corona_pk3 links to Rfam database...	0.52	0.56	0.50	10	1933	10	4	6	0	8
RFA_00770	Corona_pk3 links to Rfam database...	0.68	0.56	0.83	10	2004	5	0	2	3	8
RFA_00773	Corona_pk3 links to Rfam database...	0.55	0.56	0.56	10	1935	8	2	6	0	8
RFA_00779	Corona_pk3 links to Rfam database...	0.55	0.56	0.56	10	1935	8	3	5	0	8
RFA_00808	RydC links to Rfam database...	-0.01	0.00	0.00	0	2001	18	2	13	3	16
RFA_00809	RydC links to Rfam database...	0.36	0.38	0.35	6	2128	11	1	10	0	10
TMR_00007	tmRNA links to Rfam database...	0.28	0.28	0.29	30	61674	77	11	61	5	78
TMR_00008	tmRNA links to Rfam database...	0.44	0.44	0.43	47	65957	69	16	46	7	59
TMR_00010	tmRNA links to Rfam database...	0.29	0.30	0.28	29	57866	75	13	62	0	67
TMR_00012	tmRNA links to Rfam database...	0.28	0.28	0.27	23	64535	77	20	42	15	58
TMR_00014	tmRNA links to Rfam database...	0.47	0.47	0.48	52	68526	64	13	44	7	58
TMR_00017	tmRNA links to Rfam database...	0.39	0.40	0.38	41	67053	73	15	52	6	61
TMR_00018	tmRNA links to Rfam database...	0.12	0.13	0.12	12	64521	93	11	76	6	80
TMR_00028	tmRNA links to Rfam database...	0.66	0.67	0.66	65	62736	38	6	28	4	32
TMR_00030	tmRNA links to Rfam database...	0.19	0.20	0.19	22	75741	97	14	78	5	89
TMR_00034	tmRNA links to Rfam database...	0.66	0.65	0.66	72	59922	43	12	25	6	38
TMR_00035	tmRNA links to Rfam database...	0.38	0.40	0.37	39	67791	72	9	57	6	59
TMR_00036	tmRNA links to Rfam database...	0.58	0.58	0.58	59	90423	73	10	33	30	42
TMR_00038	tmRNA links to Rfam database...	0.25	0.25	0.25	28	71141	88	12	72	4	82
TMR_00042	tmRNA links to Rfam database...	0.24	0.24	0.24	24	62735	79	9	67	3	74
TMR_00046	tmRNA links to Rfam database...	0.54	0.56	0.53	54	62733	51	11	37	3	42
TMR_00047	tmRNA links to Rfam database...	0.28	0.33	0.24	19	48438	74	16	43	15	38
TMR_00048	tmRNA links to Rfam database...	0.33	0.35	0.31	33	64873	79	9	65	5	62
TMR_00049	tmRNA links to Rfam database...	0.52	0.54	0.51	47	63098	57	9	36	12	40
TMR_00051	tmRNA links to Rfam database...	0.63	0.61	0.66	57	65617	48	4	25	19	37
TMR_00055	tmRNA links to Rfam database...	0.14	0.15	0.14	17	78881	105	22	83	0	97
TMR_00057	tmRNA links to Rfam database...	0.14	0.16	0.12	13	73809	108	30	68	10	66
TMR_00061	tmRNA links to Rfam database...	0.22	0.23	0.21	23	59578	91	11	73	7	76
TMR_00062	tmRNA links to Rfam database...	0.61	0.64	0.59	67	78492	62	14	33	15	37
TMR_00064	tmRNA links to Rfam database...	0.40	0.40	0.39	41	76924	71	20	43	8	62
TMR_00065	tmRNA links to Rfam database...	0.48	0.52	0.45	55	76514	69	22	45	2	51
TMR_00067	tmRNA links to Rfam database...	0.44	0.45	0.43	51	82096	72	16	52	4	63
TMR_00073	tmRNA links to Rfam database...	0.45	0.44	0.46	51	65592	61	10	50	1	66
TMR_00076	tmRNA links to Rfam database...	0.33	0.34	0.32	34	70771	77	16	55	6	66
TMR_00080	tmRNA links to Rfam database...	0.55	0.56	0.53	54	70398	51	16	32	3	42
TMR_00081	tmRNA links to Rfam database...	0.47	0.45	0.48	48	67061	53	12	40	1	58
TMR_00082	tmRNA links to Rfam database...	0.59	0.58	0.59	56	67801	44	12	27	5	40
TMR_00083	tmRNA links to Rfam database...	0.55	0.57	0.53	60	68151	57	14	40	3	45
TMR_00092	tmRNA links to Rfam database...	0.63	0.65	0.60	66	67418	46	13	31	2	35
TMR_00093	tmRNA links to Rfam database...	0.49	0.51	0.47	52	64150	61	14	45	2	50
TMR_00096	tmRNA links to Rfam database...	0.43	0.45	0.42	45	64873	66	11	51	4	55
TMR_00101	tmRNA links to Rfam database...	0.44	0.44	0.44	47	64154	64	8	52	4	60
TMR_00102	tmRNA links to Rfam database...	0.48	0.49	0.48	49	64159	57	8	45	4	52
TMR_00103	tmRNA links to Rfam database...	0.58	0.58	0.57	63	64151	49	11	36	2	45
TMR_00104	-	0.08	0.10	0.07	7	66700	94	34	54	6	63
TMR_00106	tmRNA links to Rfam database...	0.51	0.53	0.49	63	89971	70	15	51	4	57
TMR_00109	tmRNA links to Rfam database...	0.27	0.27	0.27	33	88286	94	21	70	3	89
TMR_00111	tmRNA links to Rfam database...	0.33	0.34	0.32	42	90395	92	18	70	4	80
TMR_00116	tmRNA links to Rfam database...	0.62	0.61	0.63	63	64880	49	4	33	12	41
TMR_00117	tmRNA links to Rfam database...	0.60	0.60	0.59	71	80080	58	7	42	9	47
TMR_00118	tmRNA links to Rfam database...	0.38	0.38	0.38	46	81286	81	6	68	7	74
TMR_00119	tmRNA links to Rfam database...	0.54	0.55	0.54	57	71905	55	8	40	7	47
TMR_00123	tmRNA links to Rfam database...	0.49	0.49	0.51	49	66333	53	10	38	5	52
TMR_00124	tmRNA links to Rfam database...	0.30	0.33	0.28	32	70386	89	22	60	7	66
TMR_00125	tmRNA links to Rfam database...	0.19	0.20	0.19	20	64155	90	17	69	4	79
TMR_00127	tmRNA links to Rfam database...	0.24	0.25	0.23	24	62729	85	24	58	3	73
TMR_00128	tmRNA links to Rfam database...	0.43	0.45	0.42	43	60972	60	15	45	0	53
TMR_00131	tmRNA links to Rfam database...	0.28	0.28	0.29	28	64883	76	13	56	7	71
TMR_00135	tmRNA links to Rfam database...	0.61	0.58	0.64	57	62746	42	4	28	10	42
TMR_00136	tmRNA links to Rfam database...	0.20	0.22	0.18	22	74570	102	22	77	3	79
TMR_00137	tmRNA links to Rfam database...	0.25	0.27	0.24	24	60976	79	19	56	4	65
TMR_00139	tmRNA links to Rfam database...	0.57	0.62	0.53	56	62022	56	19	31	6	35
TMR_00140	tmRNA links to Rfam database...	0.49	0.50	0.49	50	73818	68	10	42	16	50
TMR_00142	tmRNA links to Rfam database...	0.56	0.61	0.53	62	70758	56	22	34	0	40
TMR_00143	tmRNA links to Rfam database...	0.45	0.46	0.45	47	64516	67	9	48	10	56
TMR_00144	tmRNA links to Rfam database...	0.26	0.27	0.24	28	74189	90	15	73	2	75
TMR_00146	tmRNA links to Rfam database...	0.87	0.88	0.86	37	32088	34	2	4	28	5
TMR_00150	tmRNA links to Rfam database...	0.71	0.71	0.71	30	43029	49	2	10	37	12
TMR_00152	tmRNA links to Rfam database...	0.25	0.26	0.25	30	81284	103	13	79	11	85
TMR_00155	tmRNA links to Rfam database...	0.42	0.39	0.45	41	61684	59	5	46	8	63
TMR_00156	tmRNA links to Rfam database...	0.20	0.20	0.21	19	60287	76	9	63	4	78
TMR_00158	tmRNA links to Rfam database...	0.43	0.43	0.43	43	60627	61	9	47	5	56
TMR_00159	tmRNA links to Rfam database...	0.23	0.25	0.21	23	62020	90	18	67	5	69
TMR_00160	tmRNA links to Rfam database...	0.42	0.43	0.41	41	64521	68	10	48	10	54
TMR_00164	tmRNA links to Rfam database...	0.39	0.39	0.39	41	66691	71	9	54	8	65
TMR_00165	tmRNA links to Rfam database...	0.30	0.32	0.29	31	61670	84	12	63	9	66
TMR_00166	tmRNA links to Rfam database...	0.34	0.33	0.35	33	61682	66	9	52	5	68
TMR_00168	tmRNA links to Rfam database...	0.68	0.66	0.70	75	60968	37	3	29	5	39
TMR_00173	tmRNA links to Rfam database...	0.31	0.36	0.28	15	42141	66	16	23	27	27
TMR_00179	tmRNA links to Rfam database...	0.56	0.58	0.54	57	67055	60	11	38	11	41
TMR_00180	tmRNA links to Rfam database...	0.59	0.60	0.58	59	67060	53	7	35	11	40
TMR_00182	tmRNA links to Rfam database...	0.11	0.12	0.11	12	66322	100	12	84	4	90
TMR_00183	tmRNA links to Rfam database...	0.20	0.20	0.19	21	63080	98	6	83	9	82
TMR_00184	tmRNA links to Rfam database...	0.40	0.41	0.39	42	63083	67	6	59	2	60
TMR_00193	tmRNA links to Rfam database...	0.43	0.44	0.42	35	59256	59	11	38	10	45
TMR_00194	tmRNA links to Rfam database...	0.48	0.48	0.47	45	62740	61	10	40	11	48
TMR_00196	tmRNA links to Rfam database...	0.37	0.39	0.36	38	60969	75	10	58	7	59
TMR_00199	tmRNA links to Rfam database...	0.56	0.59	0.53	54	62734	54	19	28	7	38
TMR_00200	-	0.56	0.56	0.56	42	41541	44	3	30	11	33
TMR_00204	tmRNA links to Rfam database...	0.40	0.40	0.40	39	60280	66	16	43	7	58
TMR_00207	tmRNA links to Rfam database...	0.36	0.35	0.36	36	72291	70	5	58	7	67
TMR_00223	tmRNA links to Rfam database...	0.25	0.26	0.24	25	64158	82	22	56	4	70
TMR_00224	tmRNA links to Rfam database...	0.40	0.42	0.39	42	64872	67	11	55	1	59
TMR_00226	tmRNA links to Rfam database...	0.47	0.50	0.45	52	69636	64	12	51	1	53
TMR_00227	tmRNA links to Rfam database...	0.22	0.24	0.21	24	70009	95	16	76	3	77
TMR_00228	tmRNA links to Rfam database...	0.30	0.32	0.28	35	88283	97	24	68	5	73
TMR_00234	tmRNA links to Rfam database...	0.25	0.26	0.24	27	58885	88	12	72	4	75
TMR_00238	tmRNA links to Rfam database...	0.33	0.35	0.31	35	84552	86	14	65	7	66
TMR_00239	tmRNA links to Rfam database...	0.46	0.48	0.45	46	61673	59	11	46	2	50
TMR_00240	tmRNA links to Rfam database...	0.21	0.24	0.20	20	63088	85	23	59	3	65
TMR_00246	-	0.72	0.71	0.73	24	78177	106	2	7	97	10
TMR_00248	tmRNA links to Rfam database...	0.12	0.16	0.10	6	54224	94	25	30	39	32
TMR_00257	tmRNA links to Rfam database...	0.25	0.24	0.26	24	67068	73	8	61	4	74
TMR_00259	tmRNA links to Rfam database...	0.58	0.58	0.58	60	67793	46	13	30	3	43
TMR_00261	tmRNA links to Rfam database...	0.53	0.54	0.51	55	66688	55	14	38	3	46
TMR_00262	tmRNA links to Rfam database...	0.50	0.52	0.47	54	74191	60	19	41	0	50
TMR_00271	tmRNA links to Rfam database...	0.49	0.48	0.50	44	64173	53	9	35	9	47
TMR_00274	tmRNA links to Rfam database...	0.29	0.30	0.29	32	66683	86	13	67	6	73
TMR_00278	tmRNA links to Rfam database...	0.44	0.46	0.43	47	67787	72	7	55	10	55
TMR_00279	tmRNA links to Rfam database...	0.44	0.46	0.43	43	68905	68	10	48	10	51
TMR_00280	tmRNA links to Rfam database...	0.51	0.52	0.49	53	65958	67	9	46	12	48
TMR_00283	tmRNA links to Rfam database...	0.56	0.56	0.56	54	65244	51	5	38	8	42
TMR_00289	tmRNA links to Rfam database...	0.61	0.62	0.59	61	67058	54	11	31	12	37
TMR_00290	tmRNA links to Rfam database...	0.20	0.22	0.19	20	64158	91	15	68	8	72
TMR_00296	tmRNA links to Rfam database...	0.35	0.35	0.36	34	68911	66	13	48	5	64
TMR_00298	tmRNA links to Rfam database...	0.48	0.51	0.46	52	68151	66	16	46	4	49
TMR_00300	tmRNA links to Rfam database...	0.31	0.31	0.32	35	70389	84	9	67	8	77
TMR_00301	tmRNA links to Rfam database...	0.38	0.39	0.37	37	82116	70	9	53	8	59
TMR_00302	tmRNA links to Rfam database...	0.24	0.28	0.22	26	77301	98	26	68	4	68
TMR_00305	tmRNA links to Rfam database...	0.70	0.67	0.73	68	60982	34	5	20	9	34
TMR_00306	tmRNA links to Rfam database...	0.21	0.22	0.21	23	64150	88	14	74	0	83
TMR_00310	tmRNA links to Rfam database...	0.65	0.64	0.66	63	63808	36	9	23	4	35
TMR_00317	tmRNA links to Rfam database...	0.56	0.58	0.55	59	68157	52	14	35	3	43
TMR_00331	tmRNA links to Rfam database...	0.51	0.56	0.47	46	66697	69	11	41	17	36
TMR_00332	tmRNA links to Rfam database...	0.39	0.38	0.39	38	67064	63	10	49	4	61
TMR_00334	tmRNA links to Rfam database...	0.52	0.50	0.54	51	66700	52	4	40	8	50
TMR_00337	tmRNA links to Rfam database...	0.56	0.55	0.58	65	82915	52	15	33	4	54
TMR_00340	tmRNA links to Rfam database...	0.47	0.48	0.46	39	64176	65	7	39	19	42
TMR_00341	tmRNA links to Rfam database...	0.20	0.22	0.19	20	63084	89	24	62	3	72
TMR_00343	tmRNA links to Rfam database...	0.31	0.30	0.32	32	64880	76	12	56	8	73
TMR_00345	tmRNA links to Rfam database...	0.55	0.54	0.56	56	63803	50	11	33	6	48
TMR_00346	tmRNA links to Rfam database...	0.49	0.52	0.46	49	64155	59	15	42	2	45
TMR_00348	tmRNA links to Rfam database...	0.14	0.14	0.14	14	77319	106	16	72	18	85
TMR_00352	tmRNA links to Rfam database...	0.56	0.60	0.52	45	95179	80	17	25	38	30
TMR_00353	tmRNA links to Rfam database...	0.43	0.43	0.44	45	84152	74	15	43	16	60
TMR_00357	tmRNA links to Rfam database...	0.40	0.41	0.39	38	82931	75	22	37	16	54
TMR_00358	tmRNA links to Rfam database...	0.50	0.49	0.50	49	74980	68	21	28	19	50
TMR_00361	-	0.35	0.42	0.30	30	93428	88	29	41	18	42
TMR_00366	tmRNA links to Rfam database...	0.28	0.28	0.28	28	67797	84	12	59	13	72
TMR_00372	tmRNA links to Rfam database...	0.60	0.61	0.58	59	70399	55	7	35	13	37
TMR_00374	tmRNA links to Rfam database...	0.26	0.28	0.23	26	81699	88	23	62	3	66
TMR_00375	tmRNA links to Rfam database...	0.39	0.42	0.36	41	73423	72	26	46	0	57
TMR_00376	tmRNA links to Rfam database...	0.42	0.43	0.41	41	74592	72	16	42	14	54
TMR_00378	tmRNA links to Rfam database...	0.28	0.30	0.27	29	67790	88	7	70	11	68
TMR_00383	tmRNA links to Rfam database...	0.10	0.11	0.10	11	66686	106	22	76	8	89
TMR_00384	tmRNA links to Rfam database...	0.32	0.31	0.32	34	65597	78	6	66	6	74
TMR_00393	tmRNA links to Rfam database...	0.57	0.62	0.52	33	53237	58	14	17	27	20
TMR_00395	tmRNA links to Rfam database...	0.37	0.36	0.38	39	64517	68	5	59	4	70
TMR_00398	tmRNA links to Rfam database...	0.67	0.65	0.69	69	65241	37	2	29	6	37
TMR_00399	tmRNA links to Rfam database...	0.16	0.17	0.15	16	64871	97	27	66	4	78
TMR_00404	tmRNA links to Rfam database...	0.49	0.52	0.46	48	67424	67	10	46	11	44
TMR_00408	tmRNA links to Rfam database...	0.62	0.65	0.59	57	65969	52	13	27	12	31
TMR_00409	tmRNA links to Rfam database...	0.57	0.65	0.49	30	68574	76	14	17	45	16
TMR_00411	tmRNA links to Rfam database...	0.55	0.56	0.53	49	60983	48	10	33	5	38
TMR_00415	tmRNA links to Rfam database...	0.35	0.35	0.35	35	67062	67	13	51	3	66
TMR_00419	tmRNA links to Rfam database...	0.30	0.29	0.31	32	81707	89	9	62	18	79
TMR_00422	tmRNA links to Rfam database...	0.54	0.57	0.52	52	67796	57	12	36	9	40
TMR_00423	tmRNA links to Rfam database...	0.11	0.14	0.10	10	63800	104	25	68	11	63
TMR_00427	tmRNA links to Rfam database...	0.31	0.31	0.31	30	67432	71	11	55	5	67
TMR_00429	tmRNA links to Rfam database...	0.52	0.51	0.53	56	74586	58	7	42	9	53
TMR_00430	tmRNA links to Rfam database...	0.20	0.22	0.19	24	82495	102	23	79	0	85
TMR_00431	tmRNA links to Rfam database...	0.68	0.69	0.68	38	51947	63	8	10	45	17
TMR_00432	tmRNA links to Rfam database...	0.21	0.22	0.20	23	79685	98	19	73	6	81
TMR_00433	tmRNA links to Rfam database...	0.32	0.33	0.32	35	80089	81	10	66	5	71
TMR_00439	tmRNA links to Rfam database...	0.39	0.42	0.37	42	68522	81	21	50	10	59
TMR_00441	tmRNA links to Rfam database...	0.14	0.16	0.13	13	62030	93	26	59	8	70
TMR_00443	tmRNA links to Rfam database...	0.44	0.44	0.44	46	67057	60	14	44	2	58
TMR_00448	tmRNA links to Rfam database...	0.45	0.46	0.45	42	62034	59	6	46	7	50
TMR_00451	tmRNA links to Rfam database...	0.17	0.19	0.16	17	63441	88	16	72	0	72
TMR_00457	tmRNA links to Rfam database...	0.50	0.50	0.50	51	78504	58	12	39	7	51
TMR_00458	tmRNA links to Rfam database...	0.24	0.24	0.24	22	63454	78	7	63	8	71
TMR_00460	tmRNA links to Rfam database...	0.54	0.54	0.54	57	79296	57	9	39	9	49
TMR_00465	tmRNA links to Rfam database...	0.24	0.26	0.22	24	64154	85	23	60	2	70
TMR_00469	tmRNA links to Rfam database...	0.39	0.41	0.38	41	64511	68	11	57	0	59
TMR_00472	tmRNA links to Rfam database...	0.38	0.40	0.36	39	64511	73	24	46	3	58
TMR_00478	tmRNA links to Rfam database...	0.45	0.46	0.44	46	71906	61	15	43	3	53
TMR_00498	tmRNA links to Rfam database...	0.50	0.51	0.50	50	68906	61	11	39	11	49
TMR_00499	tmRNA links to Rfam database...	0.20	0.21	0.19	21	64509	98	7	83	8	78
TMR_00501	tmRNA links to Rfam database...	0.31	0.32	0.31	29	62388	69	8	56	5	63
TMR_00502	tmRNA links to Rfam database...	0.35	0.38	0.32	35	75358	83	17	56	10	58
TMR_00503	tmRNA links to Rfam database...	0.39	0.38	0.41	42	67794	68	5	55	8	69
TMR_00519	tmRNA links to Rfam database...	0.14	0.15	0.13	14	63083	103	16	77	10	81
TMR_00520	tmRNA links to Rfam database...	0.42	0.43	0.41	43	63084	72	17	46	9	56
TMR_00522	tmRNA links to Rfam database...	0.36	0.36	0.36	35	63093	71	11	51	9	62
TMR_00528	tmRNA links to Rfam database...	0.13	0.13	0.12	13	63081	106	12	84	10	84
TMR_00540	tmRNA links to Rfam database...	0.37	0.37	0.37	38	73433	74	8	57	9	66
TMR_00541	tmRNA links to Rfam database...	0.51	0.50	0.51	53	61672	59	5	46	8	52
TMR_00544	tmRNA links to Rfam database...	0.51	0.52	0.50	56	89563	64	20	37	7	52
TMR_00547	tmRNA links to Rfam database...	0.51	0.50	0.52	50	65245	48	3	43	2	50
TMR_00553	tmRNA links to Rfam database...	0.44	0.43	0.44	35	48126	50	4	40	6	46
TMR_00559	tmRNA links to Rfam database...	0.35	0.35	0.36	35	62384	66	9	53	4	66
TMR_00560	tmRNA links to Rfam database...	0.43	0.44	0.43	43	60975	65	6	51	8	55
TMR_00562	tmRNA links to Rfam database...	0.26	0.26	0.25	27	72665	88	13	66	9	75
TMR_00563	tmRNA links to Rfam database...	0.37	0.39	0.35	40	75351	83	20	55	8	63
TMR_00566	tmRNA links to Rfam database...	0.53	0.52	0.54	52	60629	54	5	40	9	48
TMR_00568	tmRNA links to Rfam database...	0.59	0.59	0.60	58	60630	47	3	35	9	41
TMR_00570	tmRNA links to Rfam database...	0.41	0.41	0.40	40	60278	70	6	54	10	57
TMR_00571	tmRNA links to Rfam database...	0.59	0.60	0.58	59	60624	48	8	35	5	40
TMR_00576	tmRNA links to Rfam database...	0.57	0.57	0.57	58	60277	52	9	34	9	44
TMR_00579	tmRNA links to Rfam database...	0.27	0.31	0.24	28	80484	98	23	66	9	62
TMR_00580	tmRNA links to Rfam database...	0.53	0.53	0.54	53	60627	55	15	31	9	47
TMR_00581	tmRNA links to Rfam database...	0.52	0.54	0.50	53	62375	57	10	43	4	45
TMR_00584	tmRNA links to Rfam database...	0.40	0.42	0.38	41	60967	73	8	59	6	56
TMR_00586	tmRNA links to Rfam database...	0.23	0.25	0.21	24	60962	90	19	70	1	73
TMR_00587	tmRNA links to Rfam database...	0.78	0.76	0.80	76	61330	24	4	15	5	24
TMR_00588	tmRNA links to Rfam database...	0.26	0.27	0.25	27	77311	92	24	59	9	74
TMR_00594	tmRNA links to Rfam database...	0.22	0.22	0.22	23	79295	88	14	69	5	81
TMR_00596	tmRNA links to Rfam database...	0.19	0.20	0.18	19	78105	98	17	69	12	76
TMR_00599	tmRNA links to Rfam database...	0.12	0.14	0.10	10	63092	95	29	59	7	62
TMR_00600	tmRNA links to Rfam database...	0.18	0.18	0.18	21	79685	96	18	76	2	94
TMR_00601	tmRNA links to Rfam database...	0.56	0.57	0.55	24	58952	77	2	18	57	18
TMR_00603	tmRNA links to Rfam database...	0.67	0.70	0.65	30	60332	76	7	9	60	13
TMR_00604	tmRNA links to Rfam database...	0.69	0.67	0.71	75	62729	31	9	22	0	37
TMR_00605	tmRNA links to Rfam database...	0.49	0.50	0.49	54	74194	58	21	36	1	54
TMR_00606	tmRNA links to Rfam database...	0.40	0.40	0.39	43	68897	73	5	61	7	64
TMR_00609	tmRNA links to Rfam database...	0.67	0.67	0.67	76	63433	39	8	29	2	37
TMR_00610	tmRNA links to Rfam database...	0.62	0.63	0.62	65	62023	52	7	33	12	39
TMR_00611	tmRNA links to Rfam database...	0.59	0.62	0.57	63	61315	50	14	33	3	39
TMR_00612	tmRNA links to Rfam database...	0.40	0.41	0.40	43	60618	69	9	56	4	61
TMR_00614	tmRNA links to Rfam database...	0.30	0.30	0.30	31	60973	77	9	62	6	73
TMR_00615	tmRNA links to Rfam database...	0.31	0.32	0.30	31	63798	84	17	57	10	65
TMR_00616	tmRNA links to Rfam database...	0.36	0.37	0.36	37	67057	72	18	49	5	62
TMR_00617	tmRNA links to Rfam database...	0.38	0.41	0.35	24	34647	55	13	32	10	34
TMR_00623	tmRNA links to Rfam database...	0.45	0.44	0.47	47	61325	57	2	51	4	61
TMR_00624	tmRNA links to Rfam database...	0.51	0.51	0.51	55	62373	65	5	48	12	53
TMR_00625	tmRNA links to Rfam database...	0.22	0.23	0.21	24	78888	95	28	63	4	82
TMR_00626	tmRNA links to Rfam database...	0.38	0.39	0.37	42	67782	79	18	54	7	67
TMR_00680	tmRNA links to Rfam database...	0.20	0.21	0.19	21	67784	95	20	71	4	78
TMR_00681	tmRNA links to Rfam database...	0.43	0.42	0.43	41	65971	64	7	47	10	56
TMR_00683	tmRNA links to Rfam database...	0.33	0.35	0.32	35	82917	79	17	59	3	65
TMR_00686	tmRNA links to Rfam database...	0.45	0.45	0.44	49	71142	73	14	48	11	59
TMR_00687	tmRNA links to Rfam database...	0.35	0.35	0.35	39	71521	81	6	65	10	72
TMR_00696	tmRNA links to Rfam database...	0.22	0.23	0.21	26	84954	107	28	70	9	88
TMR_00698	tmRNA links to Rfam database...	0.36	0.36	0.36	37	63087	69	17	49	3	67
TMR_00699	tmRNA links to Rfam database...	0.22	0.23	0.22	23	67056	84	11	71	2	79
TMR_00702	tmRNA links to Rfam database...	0.16	0.16	0.16	16	67059	90	10	76	4	84
TMR_00703	tmRNA links to Rfam database...	0.31	0.31	0.30	31	67426	75	14	57	4	68
TMR_00706	tmRNA links to Rfam database...	0.52	0.51	0.52	53	66328	53	6	43	4	50
TMR_00711	tmRNA links to Rfam database...	0.58	0.58	0.58	57	67797	46	14	28	4	41
TMR_00712	tmRNA links to Rfam database...	0.40	0.41	0.39	45	78491	72	19	51	2	64
TMR_00716	tmRNA links to Rfam database...	0.18	0.19	0.17	19	62725	91	16	75	0	81

^top

Matthews Correlation Coeffient, Sensitivity and Positive Predictive Value have been calculated based on the paper by Gardener & Giegerich, 2004.

Table of contents:

Overview

Performance plots

Performance of ContextFold - scored higher in this pairwise comparison

1. Total counts & total scores for ContextFold

2. Individual counts for ContextFold [ download as .csv ]

Performance of RNAfold - scored lower in this pairwise comparison

1. Total counts & total scores for RNAfold

2. Individual counts for RNAfold [ download as .csv ]