CompaRNA - on-line benchmarks of RNA structure prediction methods

Laboratory of Structural Bioinformatics @ Adam Mickiewicz University in Poznan

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Overview

Metric	Fold		Afold
MCC	0.413	>	0.408
Average MCC ± 95% Confidence Intervals	0.465 ± 0.015	>	0.443 ± 0.015
Sensitivity	0.415	>	0.406
Positive Predictive Value	0.411	>	0.411
Total TP	51667	>	50595
Total TN	313209316	<	313211807
Total FP	89950	>	87657
Total FP CONTRA	11500	>	11431
Total FP INCONS	62476	>	61126
Total FP COMP	15974	>	15100
Total FN	72945	<	74017
P-value	3.56938820447e-08

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Performance plots

Comparison of performance of Fold and Afold. Positive Predictive Value (PPV) is plotted against sensitivity. Each dot represents a single test of each method. See tables below for raw data (individual counts for Fold and Afold).
Average Matthews Correlation Coefficients (MCC) with 95% confidence intervals (CIs) were plotted for different RNA families, for which at least 3 members were present in the benchmarking dataset. 'n' denotes the number of MCCs used to calculate the average and CI. See tables below for raw data (individual counts for Fold and Afold).
Comparison of average Matthews Correlation Coefficients (MCCs) for Fold and Afold. The whiskers correspond to 95% confidence intervals (CIs). 'n' denotes the number of MCCs used to calculate average MCCs and CIs. See tables below for raw data (individual counts for Fold and Afold).

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Performance of Fold - scored higher in this pairwise comparison

1. Total counts & total scores for Fold

Total Base Pair Counts
Total TP	51667
Total TN	313209316
Total FP	89950
Total FP CONTRA	11500
Total FP INCONS	62476
Total FP COMP	15974
Total FN	72945

Total Scores
MCC	0.413
Average MCC ± 95% Confidence Intervals	0.465 ± 0.015
Sensitivity	0.415
Positive Predictive Value	0.411
Nr of predictions	595

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2. Individual counts for Fold [ download as .csv ]

RNA Chain	Rfam family	MCC	SENS	PPV	TP	TN	FP	FP CONTRA	FP INCONS	FP COMP	FN
ASE_00001	RNaseP_arch links to Rfam database...	0.84	0.81	0.87	61	34121	17	2	7	8	14
ASE_00002	RNaseP_arch links to Rfam database...	0.70	0.67	0.73	49	35444	21	4	14	3	24
ASE_00004	RNaseP_bact_a links to Rfam database...	0.68	0.68	0.69	66	47799	34	9	21	4	31
ASE_00005	RNaseP_bact_a links to Rfam database...	0.73	0.68	0.78	80	57868	29	0	22	7	37
ASE_00006	RNaseP_bact_a links to Rfam database...	0.49	0.51	0.48	47	47488	55	11	40	4	46
ASE_00007	RNaseP_bact_a links to Rfam database...	0.53	0.52	0.54	57	59579	56	2	47	7	53
ASE_00009	RNaseP_arch links to Rfam database...	0.38	0.37	0.38	25	26041	42	4	36	2	42
ASE_00012	RNaseP_bact_a links to Rfam database...	0.35	0.34	0.35	42	73801	81	7	70	4	81
ASE_00014	RNaseP_arch links to Rfam database...	0.42	0.42	0.43	44	54182	67	2	57	8	62
ASE_00017	RNaseP_nuc links to Rfam database...	0.21	0.23	0.19	15	50959	87	21	45	21	49
ASE_00020	RNaseP_bact_a links to Rfam database...	0.56	0.54	0.58	68	73803	52	8	41	3	58
ASE_00021	RNaseP_bact_a links to Rfam database...	0.63	0.59	0.68	94	104057	52	4	41	7	66
ASE_00023	RNaseP_bact_a links to Rfam database...	0.64	0.65	0.64	82	84127	49	5	41	3	45
ASE_00028	RNaseP_bact_b links to Rfam database...	0.72	0.70	0.75	88	84548	39	6	24	9	38
ASE_00029	RNaseP_bact_a links to Rfam database...	0.54	0.52	0.57	64	82915	53	7	42	4	58
ASE_00030	RNaseP_bact_a links to Rfam database...	0.63	0.61	0.66	88	85357	50	2	44	4	57
ASE_00032	RNaseP_bact_a links to Rfam database...	0.54	0.53	0.55	63	80086	57	7	44	6	55
ASE_00033	RNaseP_bact_a links to Rfam database...	0.28	0.26	0.30	32	64873	77	7	68	2	89
ASE_00036	RNaseP_bact_a links to Rfam database...	0.51	0.48	0.53	64	75734	64	5	52	7	68
ASE_00037	RNaseP_bact_a links to Rfam database...	0.37	0.35	0.39	39	59239	67	2	60	5	71
ASE_00038	RNaseP_bact_a links to Rfam database...	0.43	0.43	0.44	43	53530	58	2	53	3	58
ASE_00040	RNaseP_bact_a links to Rfam database...	0.48	0.46	0.50	61	78881	67	4	57	6	72
ASE_00041	RNaseP_bact_a links to Rfam database...	0.44	0.42	0.46	45	57532	56	5	48	3	63
ASE_00042	RNaseP_bact_a links to Rfam database...	0.44	0.41	0.46	60	89970	74	3	67	4	85
ASE_00044	RNaseP_bact_a links to Rfam database...	0.73	0.73	0.73	77	54510	33	4	24	5	28
ASE_00046	RNaseP_bact_a links to Rfam database...	0.37	0.35	0.39	36	50310	59	9	48	2	67
ASE_00047	RNaseP_bact_a links to Rfam database...	0.60	0.58	0.62	75	74184	47	2	44	1	55
ASE_00053	RNaseP_bact_a links to Rfam database...	0.61	0.58	0.64	77	79281	50	4	39	7	56
ASE_00056	-	0.70	0.67	0.74	48	30811	24	3	14	7	24
ASE_00064	RNaseP_bact_a links to Rfam database...	0.37	0.38	0.36	34	45357	67	6	54	7	55
ASE_00066	RNaseP_bact_a links to Rfam database...	0.62	0.59	0.66	77	72273	42	2	38	2	53
ASE_00068	RNaseP_bact_a links to Rfam database...	0.51	0.48	0.53	41	37598	41	2	34	5	44
ASE_00074	RNaseP_bact_a links to Rfam database...	0.48	0.47	0.49	56	67782	59	4	54	1	63
ASE_00075	RNaseP_bact_a links to Rfam database...	0.65	0.61	0.69	99	108668	53	4	40	9	63
ASE_00076	RNaseP_bact_a links to Rfam database...	0.50	0.48	0.52	57	68156	55	2	50	3	61
ASE_00077	RNaseP_bact_a links to Rfam database...	0.57	0.56	0.58	48	45067	41	4	31	6	38
ASE_00078	RNaseP_bact_a links to Rfam database...	0.76	0.76	0.76	63	42988	26	3	17	6	20
ASE_00079	RNaseP_bact_a links to Rfam database...	0.52	0.50	0.54	50	55518	44	2	41	1	50
ASE_00080	RNaseP_bact_a links to Rfam database...	0.55	0.54	0.57	66	71516	54	5	44	5	57
ASE_00081	RNaseP_bact_a links to Rfam database...	0.51	0.52	0.52	50	49673	49	5	42	2	47
ASE_00082	RNaseP_bact_a links to Rfam database...	0.77	0.73	0.81	85	70395	32	3	17	12	31
ASE_00083	RNaseP_bact_a links to Rfam database...	0.59	0.58	0.60	64	62375	47	8	34	5	46
ASE_00084	RNaseP_bact_a links to Rfam database...	0.59	0.60	0.58	59	53527	45	6	36	3	40
ASE_00087	RNaseP_bact_a links to Rfam database...	0.76	0.72	0.80	103	88281	32	3	23	6	41
ASE_00089	-	0.47	0.44	0.50	35	31305	39	1	34	4	44
ASE_00090	RNaseP_bact_a links to Rfam database...	0.66	0.66	0.65	67	55508	43	4	32	7	34
ASE_00092	RNaseP_bact_a links to Rfam database...	0.50	0.50	0.50	56	63434	60	12	44	4	57
ASE_00096	RNaseP_bact_a links to Rfam database...	0.47	0.45	0.50	52	63441	54	4	49	1	63
ASE_00104	RNaseP_bact_a links to Rfam database...	0.73	0.67	0.78	80	64159	28	1	21	6	39
ASE_00111	RNaseP_nuc links to Rfam database...	0.38	0.46	0.31	26	50003	78	21	36	21	31
ASE_00112	RNaseP_bact_a links to Rfam database...	0.75	0.73	0.77	85	75356	33	2	23	8	31
ASE_00115	RNaseP_bact_a links to Rfam database...	0.68	0.68	0.68	69	54514	40	5	27	8	32
ASE_00116	RNaseP_arch links to Rfam database...	0.20	0.20	0.20	13	31560	56	5	48	3	53
ASE_00118	RNaseP_bact_a links to Rfam database...	0.32	0.31	0.33	32	60628	70	5	61	4	70
ASE_00119	RNaseP_bact_a links to Rfam database...	0.81	0.81	0.82	87	62729	21	2	17	2	21
ASE_00120	RNaseP_arch links to Rfam database...	0.50	0.49	0.51	46	46880	45	4	41	0	48
ASE_00121	RNaseP_arch links to Rfam database...	0.25	0.25	0.25	23	45059	70	6	62	2	69
ASE_00122	RNaseP_bact_a links to Rfam database...	0.45	0.45	0.45	40	43276	50	2	47	1	48
ASE_00123	RNaseP_bact_a links to Rfam database...	0.53	0.51	0.55	43	38425	39	2	33	4	42
ASE_00125	RNaseP_bact_a links to Rfam database...	0.71	0.66	0.77	58	39265	27	0	17	10	30
ASE_00126	RNaseP_bact_a links to Rfam database...	0.63	0.63	0.62	52	40386	32	3	29	0	30
ASE_00128	RNaseP_bact_a links to Rfam database...	0.66	0.64	0.68	64	53207	36	5	25	6	36
ASE_00129	RNaseP_bact_a links to Rfam database...	0.70	0.68	0.74	75	62733	34	3	24	7	36
ASE_00131	RNaseP_bact_a links to Rfam database...	0.61	0.58	0.64	49	39264	35	1	26	8	36
ASE_00132	RNaseP_bact_a links to Rfam database...	0.62	0.59	0.65	56	50317	34	4	26	4	39
ASE_00134	RNaseP_bact_a links to Rfam database...	0.41	0.42	0.41	40	50305	61	8	50	3	55
ASE_00135	RNaseP_bact_a links to Rfam database...	0.49	0.48	0.50	52	63086	59	7	45	7	57
ASE_00136	RNaseP_bact_a links to Rfam database...	0.73	0.71	0.76	65	48120	28	0	20	8	27
ASE_00137	RNaseP_bact_a links to Rfam database...	0.76	0.74	0.77	73	48421	28	4	18	6	25
ASE_00138	RNaseP_bact_a links to Rfam database...	0.49	0.48	0.51	39	40393	43	4	34	5	42
ASE_00139	RNaseP_bact_a links to Rfam database...	0.51	0.49	0.54	51	54190	50	2	42	6	53
ASE_00140	RNaseP_bact_a links to Rfam database...	0.68	0.64	0.73	80	70767	32	4	25	3	45
ASE_00145	RNaseP_arch links to Rfam database...	0.45	0.44	0.46	49	70018	68	7	51	10	62
ASE_00146	RNaseP_bact_a links to Rfam database...	0.60	0.56	0.64	69	70769	42	1	37	4	55
ASE_00148	RNaseP_arch links to Rfam database...	0.67	0.66	0.69	101	112428	49	4	42	3	53
ASE_00151	RNaseP_bact_a links to Rfam database...	0.62	0.60	0.65	59	51912	39	10	22	7	39
ASE_00153	RNaseP_nuc links to Rfam database...	0.57	0.60	0.54	44	57549	73	9	28	36	29
ASE_00154	RNaseP_arch links to Rfam database...	0.58	0.58	0.58	62	65234	49	4	41	4	45
ASE_00155	RNaseP_arch links to Rfam database...	0.60	0.59	0.60	84	93389	61	10	45	6	58
ASE_00163	RNaseP_bact_a links to Rfam database...	0.33	0.31	0.34	29	53216	65	5	51	9	64
ASE_00165	RNaseP_bact_a links to Rfam database...	0.43	0.43	0.44	43	52878	56	5	49	2	58
ASE_00168	RNaseP_nuc links to Rfam database...	0.29	0.38	0.23	24	60621	95	32	49	14	40
ASE_00169	RNaseP_bact_a links to Rfam database...	0.56	0.53	0.59	57	57194	46	7	33	6	50
ASE_00170	RNaseP_bact_a links to Rfam database...	0.79	0.76	0.83	71	48742	24	2	13	9	22
ASE_00171	RNaseP_bact_a links to Rfam database...	0.56	0.55	0.58	52	48426	40	3	35	2	42
ASE_00172	RNaseP_bact_a links to Rfam database...	0.60	0.60	0.60	64	58890	44	5	37	2	42
ASE_00174	RNaseP_bact_a links to Rfam database...	0.49	0.49	0.50	53	60968	56	8	46	2	56
ASE_00175	RNaseP_bact_a links to Rfam database...	0.71	0.69	0.73	74	59929	34	2	26	6	33
ASE_00176	RNaseP_bact_a links to Rfam database...	0.50	0.47	0.54	52	59934	49	3	42	4	58
ASE_00179	RNaseP_bact_a links to Rfam database...	0.49	0.50	0.48	42	44166	45	7	38	0	42
ASE_00180	RNaseP_bact_a links to Rfam database...	0.56	0.54	0.58	54	51267	46	3	36	7	46
ASE_00181	RNaseP_bact_a links to Rfam database...	0.60	0.59	0.61	63	57527	46	3	37	6	43
ASE_00182	RNaseP_bact_a links to Rfam database...	0.57	0.55	0.59	75	84128	55	5	47	3	61
ASE_00183	RNaseP_bact_a links to Rfam database...	0.71	0.67	0.75	76	61323	32	0	26	6	37
ASE_00185	RNaseP_bact_a links to Rfam database...	0.77	0.73	0.82	94	73421	27	1	20	6	34
ASE_00186	RNaseP_bact_a links to Rfam database...	0.68	0.67	0.69	88	78876	45	3	36	6	44
ASE_00187	RNaseP_arch links to Rfam database...	0.30	0.30	0.31	34	68524	84	7	70	7	81
ASE_00190	RNaseP_bact_b links to Rfam database...	0.59	0.57	0.62	51	45369	38	3	28	7	39
ASE_00192	RNaseP_bact_b links to Rfam database...	0.52	0.50	0.55	66	84545	59	8	47	4	67
ASE_00196	RNaseP_arch links to Rfam database...	0.80	0.79	0.81	59	31553	21	2	12	7	16
ASE_00197	RNaseP_bact_a links to Rfam database...	0.59	0.57	0.63	82	89122	60	3	46	11	63
ASE_00198	RNaseP_bact_a links to Rfam database...	0.78	0.73	0.83	74	52561	21	2	13	6	28
ASE_00203	RNaseP_bact_a links to Rfam database...	0.72	0.71	0.73	68	46572	31	4	21	6	28
ASE_00209	RNaseP_arch links to Rfam database...	0.40	0.39	0.41	34	42989	49	4	44	1	54
ASE_00210	RNaseP_arch links to Rfam database...	0.65	0.66	0.64	43	27194	25	6	18	1	22
ASE_00212	RNaseP_bact_a links to Rfam database...	0.59	0.57	0.60	85	93820	64	3	53	8	63
ASE_00213	RNaseP_arch links to Rfam database...	0.74	0.73	0.76	48	27198	16	3	12	1	18
ASE_00214	RNaseP_bact_a links to Rfam database...	0.75	0.74	0.76	76	56180	34	3	21	10	27
ASE_00215	RNaseP_bact_a links to Rfam database...	0.60	0.58	0.62	57	48424	39	5	30	4	42
ASE_00216	RNaseP_bact_a links to Rfam database...	0.27	0.28	0.26	23	39252	66	12	53	1	59
ASE_00217	RNaseP_bact_a links to Rfam database...	0.31	0.30	0.33	27	40388	63	4	51	8	63
ASE_00221	RNaseP_bact_a links to Rfam database...	0.55	0.52	0.59	61	64517	46	2	40	4	56
ASE_00222	RNaseP_arch links to Rfam database...	0.53	0.52	0.54	81	111950	70	8	62	0	76
ASE_00227	RNaseP_bact_a links to Rfam database...	0.51	0.49	0.54	65	78883	55	7	48	0	68
ASE_00228	RNaseP_bact_a links to Rfam database...	0.52	0.53	0.52	46	46882	47	13	30	4	40
ASE_00229	RNaseP_bact_a links to Rfam database...	0.72	0.70	0.73	61	42403	29	1	21	7	26
ASE_00231	RNaseP_bact_a links to Rfam database...	0.45	0.45	0.46	43	47801	56	2	49	5	53
ASE_00232	RNaseP_bact_a links to Rfam database...	0.66	0.67	0.65	56	38417	33	10	20	3	28
ASE_00234	RNaseP_bact_a links to Rfam database...	0.54	0.50	0.58	65	75353	53	4	44	5	64
ASE_00237	RNaseP_nuc links to Rfam database...	0.00	0.00	0.00	0	45679	96	25	49	22	56
ASE_00238	RNaseP_bact_a links to Rfam database...	0.68	0.65	0.71	74	64157	36	2	28	6	40
ASE_00240	RNaseP_bact_a links to Rfam database...	0.56	0.56	0.57	52	46574	45	1	38	6	41
ASE_00241	RNaseP_bact_a links to Rfam database...	0.69	0.69	0.68	60	43868	31	2	26	3	27
ASE_00246	RNaseP_nuc links to Rfam database...	0.17	0.19	0.15	13	48121	88	17	54	17	54
ASE_00247	RNaseP_nuc links to Rfam database...	0.43	0.45	0.41	29	54215	82	8	33	41	35
ASE_00252	RNaseP_bact_a links to Rfam database...	0.59	0.57	0.63	95	115288	67	2	55	10	73
ASE_00254	RNaseP_bact_a links to Rfam database...	0.29	0.29	0.30	24	36776	61	5	51	5	58
ASE_00255	RNaseP_bact_a links to Rfam database...	0.51	0.50	0.52	65	74567	61	4	55	2	65
ASE_00257	RNaseP_bact_a links to Rfam database...	0.49	0.47	0.50	46	50948	50	2	44	4	51
ASE_00263	RNaseP_bact_a links to Rfam database...	0.57	0.58	0.58	69	70380	54	5	46	3	51
ASE_00264	RNaseP_nuc links to Rfam database...	0.84	0.80	0.89	80	49051	25	1	9	15	20
ASE_00267	RNaseP_bact_a links to Rfam database...	0.65	0.63	0.68	55	45069	36	2	24	10	33
ASE_00270	RNaseP_bact_a links to Rfam database...	0.82	0.79	0.85	101	72271	24	1	17	6	27
ASE_00274	RNaseP_bact_a links to Rfam database...	0.42	0.41	0.43	42	55514	57	7	48	2	61
ASE_00277	RNaseP_bact_a links to Rfam database...	0.42	0.43	0.41	39	48110	59	9	47	3	52
ASE_00279	RNaseP_bact_a links to Rfam database...	0.49	0.48	0.51	48	53207	49	7	39	3	53
ASE_00280	RNaseP_bact_a links to Rfam database...	0.52	0.50	0.53	49	51911	47	8	35	4	49
ASE_00282	RNaseP_bact_a links to Rfam database...	0.44	0.44	0.44	56	77688	71	4	67	0	71
ASE_00283	RNaseP_bact_a links to Rfam database...	0.71	0.68	0.74	73	61677	34	3	23	8	34
ASE_00284	RNaseP_bact_a links to Rfam database...	0.68	0.66	0.71	71	58211	37	4	25	8	37
ASE_00285	RNaseP_bact_a links to Rfam database...	0.81	0.76	0.86	93	68898	25	2	13	10	29
ASE_00286	RNaseP_bact_a links to Rfam database...	0.39	0.38	0.40	35	46577	63	2	51	10	57
ASE_00287	RNaseP_bact_a links to Rfam database...	0.71	0.68	0.74	70	54851	31	5	20	6	33
ASE_00288	RNaseP_bact_a links to Rfam database...	0.31	0.31	0.31	29	45963	66	7	57	2	64
ASE_00289	RNaseP_bact_a links to Rfam database...	0.64	0.62	0.67	97	100880	52	3	45	4	60
ASE_00291	-	0.41	0.41	0.41	39	48420	58	9	48	1	55
ASE_00292	RNaseP_bact_a links to Rfam database...	0.44	0.42	0.46	58	81685	71	2	65	4	80
ASE_00294	RNaseP_bact_a links to Rfam database...	0.60	0.56	0.64	96	114332	57	3	50	4	75
ASE_00295	RNaseP_bact_a links to Rfam database...	0.57	0.52	0.62	68	73810	45	4	38	3	63
ASE_00296	RNaseP_bact_a links to Rfam database...	0.42	0.41	0.44	59	91673	77	9	65	3	86
ASE_00297	RNaseP_bact_a links to Rfam database...	0.48	0.50	0.47	49	52871	56	8	47	1	49
ASE_00298	RNaseP_bact_a links to Rfam database...	0.52	0.50	0.54	56	67425	51	1	46	4	57
ASE_00299	RNaseP_bact_a links to Rfam database...	0.59	0.56	0.62	56	49365	41	1	33	7	44
ASE_00313	RNaseP_nuc links to Rfam database...	0.68	0.70	0.67	62	62389	53	5	25	23	27
ASE_00328	RNaseP_bact_b links to Rfam database...	0.68	0.65	0.72	73	72669	43	4	25	14	39
ASE_00330	RNaseP_nuc links to Rfam database...	0.66	0.68	0.65	61	56186	52	6	27	19	29
ASE_00332	RNaseP_bact_a links to Rfam database...	0.48	0.46	0.50	64	81683	66	2	61	3	74
ASE_00337	RNaseP_nuc links to Rfam database...	0.39	0.41	0.38	29	39263	60	5	43	12	42
ASE_00338	RNaseP_nuc links to Rfam database...	0.56	0.56	0.57	55	66333	55	4	38	13	43
ASE_00340	RNaseP_bact_a links to Rfam database...	0.75	0.74	0.76	63	45973	27	6	14	7	22
ASE_00342	RNaseP_bact_a links to Rfam database...	0.62	0.58	0.67	67	62381	34	1	32	1	48
ASE_00343	RNaseP_bact_a links to Rfam database...	0.68	0.68	0.69	77	83324	51	8	27	16	36
ASE_00346	RNaseP_arch links to Rfam database...	0.53	0.53	0.54	51	48110	52	4	40	8	46
ASE_00359	RNaseP_arch links to Rfam database...	0.09	0.10	0.09	8	42688	82	9	73	0	72
ASE_00361	RNaseP_bact_a links to Rfam database...	0.52	0.51	0.53	65	75343	61	11	47	3	62
ASE_00362	RNaseP_bact_a links to Rfam database...	0.59	0.59	0.59	54	48114	40	2	35	3	37
ASE_00363	RNaseP_bact_a links to Rfam database...	0.55	0.55	0.55	52	51266	49	3	39	7	42
ASE_00364	RNaseP_bact_a links to Rfam database...	0.74	0.72	0.76	76	54185	32	1	23	8	29
ASE_00366	RNaseP_bact_a links to Rfam database...	0.41	0.42	0.40	41	58550	63	10	52	1	57
ASE_00367	RNaseP_bact_a links to Rfam database...	0.50	0.52	0.48	45	42977	52	4	45	3	41
ASE_00369	RNaseP_bact_a links to Rfam database...	0.61	0.61	0.61	65	55839	45	2	39	4	42
ASE_00370	RNaseP_bact_a links to Rfam database...	0.54	0.55	0.53	46	41818	45	5	36	4	38
ASE_00372	RNaseP_bact_a links to Rfam database...	0.69	0.69	0.70	69	51904	36	6	24	6	31
ASE_00374	RNaseP_bact_a links to Rfam database...	0.68	0.67	0.69	59	44765	28	3	23	2	29
ASE_00375	RNaseP_bact_a links to Rfam database...	0.79	0.75	0.85	82	60281	21	0	15	6	28
ASE_00376	RNaseP_bact_a links to Rfam database...	0.60	0.59	0.61	62	56852	47	1	38	8	43
ASE_00379	RNaseP_bact_a links to Rfam database...	0.48	0.47	0.49	42	45971	53	3	40	10	47
ASE_00380	RNaseP_bact_a links to Rfam database...	0.61	0.59	0.64	58	54855	38	6	27	5	41
ASE_00382	RNaseP_bact_a links to Rfam database...	0.67	0.67	0.68	56	41823	31	6	20	5	28
ASE_00383	RNaseP_bact_a links to Rfam database...	0.43	0.42	0.44	44	54516	62	5	50	7	61
ASE_00384	RNaseP_bact_a links to Rfam database...	0.58	0.58	0.58	53	48425	40	3	35	2	39
ASE_00385	RNaseP_bact_a links to Rfam database...	0.49	0.49	0.49	40	41824	46	5	36	5	41
ASE_00386	RNaseP_bact_a links to Rfam database...	0.51	0.51	0.51	49	50307	49	7	40	2	47
ASE_00387	RNaseP_bact_a links to Rfam database...	0.58	0.56	0.60	58	55848	44	6	33	5	46
ASE_00388	RNaseP_bact_a links to Rfam database...	0.59	0.56	0.63	50	45673	41	2	28	11	39
ASE_00390	RNaseP_bact_a links to Rfam database...	0.62	0.60	0.64	51	42115	39	0	29	10	34
ASE_00393	RNaseP_bact_a links to Rfam database...	0.49	0.47	0.51	44	47808	50	2	41	7	49
ASE_00394	RNaseP_bact_a links to Rfam database...	0.77	0.75	0.79	70	46882	24	2	17	5	23
ASE_00395	RNaseP_bact_a links to Rfam database...	0.64	0.65	0.63	55	41528	37	3	30	4	29
ASE_00396	RNaseP_bact_a links to Rfam database...	0.53	0.53	0.53	44	41533	43	4	35	4	39
ASE_00397	RNaseP_bact_a links to Rfam database...	0.75	0.72	0.78	76	54518	29	2	19	8	29
ASE_00398	RNaseP_bact_a links to Rfam database...	0.61	0.58	0.64	60	55851	43	1	33	9	44
ASE_00400	RNaseP_bact_a links to Rfam database...	0.64	0.62	0.67	66	57871	38	1	32	5	40
ASE_00401	RNaseP_bact_a links to Rfam database...	0.59	0.60	0.59	75	76901	53	7	45	1	51
ASE_00402	RNaseP_bact_a links to Rfam database...	0.76	0.74	0.79	63	42406	22	2	15	5	22
ASE_00403	RNaseP_bact_a links to Rfam database...	0.67	0.64	0.70	68	55848	34	0	29	5	39
ASE_00404	RNaseP_bact_a links to Rfam database...	0.42	0.41	0.44	35	42991	54	1	44	9	50
ASE_00408	-	0.65	0.66	0.64	47	32311	32	4	23	5	24
ASE_00411	RNaseP_bact_a links to Rfam database...	0.47	0.46	0.48	41	49370	53	5	39	9	48
ASE_00413	RNaseP_bact_a links to Rfam database...	0.55	0.58	0.53	47	44462	45	13	29	3	34
ASE_00415	RNaseP_bact_a links to Rfam database...	0.66	0.65	0.66	67	54845	36	6	28	2	36
ASE_00416	RNaseP_bact_a links to Rfam database...	0.64	0.62	0.66	79	77301	49	3	38	8	48
ASE_00417	RNaseP_arch links to Rfam database...	0.35	0.36	0.35	36	54511	70	9	59	2	64
ASE_00418	RNaseP_arch links to Rfam database...	0.20	0.21	0.20	16	38701	67	9	55	3	59
ASE_00419	RNaseP_bact_a links to Rfam database...	0.74	0.74	0.75	76	54845	27	9	16	2	27
ASE_00422	RNaseP_bact_a links to Rfam database...	0.78	0.77	0.79	72	46880	26	5	14	7	22
ASE_00426	RNaseP_bact_a links to Rfam database...	0.42	0.42	0.42	45	60969	61	5	56	0	63
ASE_00428	RNaseP_bact_a links to Rfam database...	0.77	0.74	0.80	93	76520	29	3	20	6	32
ASE_00429	-	0.54	0.52	0.57	34	28143	35	2	24	9	32
ASE_00430	RNaseP_bact_a links to Rfam database...	0.71	0.70	0.72	68	46877	33	5	21	7	29
ASE_00431	RNaseP_bact_a links to Rfam database...	0.36	0.35	0.38	33	46272	59	6	49	4	62
ASE_00434	RNaseP_bact_b links to Rfam database...	0.62	0.60	0.63	66	68161	46	5	33	8	44
ASE_00437	RNaseP_bact_a links to Rfam database...	0.44	0.41	0.47	56	79281	68	0	64	4	79
ASE_00438	RNaseP_bact_a links to Rfam database...	0.49	0.47	0.50	55	65957	54	4	50	0	61
ASE_00441	RNaseP_bact_a links to Rfam database...	0.81	0.77	0.86	86	64161	24	1	13	10	26
ASE_00447	RNaseP_bact_a links to Rfam database...	0.68	0.63	0.73	73	60278	33	1	26	6	43
ASE_00448	RNaseP_bact_a links to Rfam database...	0.23	0.23	0.23	26	64147	95	8	80	7	86
ASE_00451	RNaseP_bact_a links to Rfam database...	0.64	0.61	0.67	76	70762	43	3	35	5	49
CRW_00001	-	0.53	0.53	0.54	111	3173733	670	15	81	574	98
CRW_00002	-	0.58	0.56	0.61	148	408817	138	17	78	43	116
CRW_00004	-	0.66	0.68	0.64	89	154152	82	10	39	33	42
CRW_00005	-	0.63	0.65	0.61	86	137934	80	12	43	25	46
CRW_00007	-	0.40	0.43	0.38	57	144842	100	26	66	8	76
CRW_00009	-	0.54	0.56	0.52	77	137928	94	6	64	24	61
CRW_00010	-	0.79	0.79	0.79	100	102704	45	7	20	18	26
CRW_00011	-	0.66	0.68	0.64	94	118195	65	7	45	13	44
CRW_00013	Intron_gpI links to Rfam database...	0.21	0.21	0.21	24	103627	115	11	78	26	91
CRW_00014	-	0.44	0.44	0.44	54	103617	81	9	60	12	69
CRW_00016	Intron_gpI links to Rfam database...	0.79	0.75	0.83	90	77313	31	5	13	13	30
CRW_00017	-	0.47	0.51	0.45	46	92132	87	19	38	30	45
CRW_00019	-	0.72	0.73	0.71	100	127625	64	4	36	24	37
CRW_00024	SSU_rRNA_archaea links to Rfam database...	0.56	0.57	0.56	259	1085140	238	22	180	36	199
CRW_00048	SSU_rRNA_bacteria links to Rfam database...	0.51	0.51	0.52	239	1170753	241	24	199	18	231
CRW_00054	SSU_rRNA_bacteria links to Rfam database...	0.40	0.41	0.40	185	1107355	286	30	246	10	271
CRW_00059	SSU_rRNA_bacteria links to Rfam database...	0.44	0.44	0.44	207	1172278	279	31	230	18	266
CRW_00061	SSU_rRNA_bacteria links to Rfam database...	0.54	0.54	0.54	259	1181475	236	33	186	17	217
CRW_00068	SSU_rRNA_bacteria links to Rfam database...	0.43	0.43	0.43	198	1108845	279	32	230	17	259
CRW_00096	SSU_rRNA_bacteria links to Rfam database...	0.42	0.43	0.42	200	1178403	299	28	249	22	265
CRW_00140	SSU_rRNA_bacteria links to Rfam database...	0.38	0.38	0.38	176	1135818	299	27	257	15	287
CRW_00141	SSU_rRNA_bacteria links to Rfam database...	0.53	0.53	0.54	253	1201553	246	34	185	27	223
CRW_00150	SSU_rRNA_bacteria links to Rfam database...	0.45	0.44	0.45	204	1152472	262	26	219	17	262
CRW_00152	SSU_rRNA_bacteria links to Rfam database...	0.53	0.52	0.54	246	1179962	231	33	175	23	225
CRW_00166	SSU_rRNA_bacteria links to Rfam database...	0.40	0.40	0.39	188	1190720	309	32	256	21	280
CRW_00173	SSU_rRNA_bacteria links to Rfam database...	0.28	0.28	0.28	125	1082214	333	31	286	16	320
CRW_00177	SSU_rRNA_bacteria links to Rfam database...	0.49	0.48	0.50	226	1178426	251	26	202	23	247
CRW_00196	SSU_rRNA_bacteria links to Rfam database...	0.45	0.46	0.44	219	1207740	296	42	234	20	256
CRW_00230	SSU_rRNA_bacteria links to Rfam database...	0.53	0.52	0.54	247	1198465	241	32	182	27	231
CRW_00245	SSU_rRNA_bacteria links to Rfam database...	0.37	0.37	0.37	167	1105882	297	32	247	18	286
CRW_00248	SSU_rRNA_bacteria links to Rfam database...	0.49	0.49	0.48	238	1218645	286	36	222	28	246
CRW_00250	SSU_rRNA_bacteria links to Rfam database...	0.37	0.38	0.37	181	1198432	321	48	265	8	297
CRW_00256	SSU_rRNA_bacteria links to Rfam database...	0.39	0.39	0.40	183	1192281	294	41	235	18	285
CRW_00270	SSU_rRNA_bacteria links to Rfam database...	0.54	0.54	0.54	245	1111832	232	27	182	23	210
CRW_00271	SSU_rRNA_bacteria links to Rfam database...	0.36	0.36	0.37	168	1122293	309	37	253	19	294
CRW_00273	SSU_rRNA_bacteria links to Rfam database...	0.52	0.52	0.52	233	1085151	238	41	176	21	213
CRW_00275	SSU_rRNA_bacteria links to Rfam database...	0.59	0.59	0.59	271	1114809	212	28	163	21	186
CRW_00277	SSU_rRNA_bacteria links to Rfam database...	0.32	0.32	0.32	144	1110348	313	38	265	10	309
CRW_00278	SSU_rRNA_bacteria links to Rfam database...	0.36	0.35	0.37	159	1129828	293	31	238	24	291
CRW_00279	SSU_rRNA_bacteria links to Rfam database...	0.58	0.56	0.59	262	1179969	207	27	158	22	202
CRW_00280	SSU_rRNA_bacteria links to Rfam database...	0.33	0.33	0.32	151	1117794	327	43	272	12	302
CRW_00281	SSU_rRNA_bacteria links to Rfam database...	0.53	0.52	0.53	243	1144885	238	27	186	25	221
CRW_00283	SSU_rRNA_bacteria links to Rfam database...	0.32	0.32	0.33	140	1015595	312	49	241	22	292
CRW_00284	SSU_rRNA_bacteria links to Rfam database...	0.29	0.29	0.29	130	1131315	331	40	275	16	326
CRW_00285	SSU_rRNA_bacteria links to Rfam database...	0.48	0.49	0.48	225	1117789	265	38	208	19	233
CRW_00289	SSU_rRNA_bacteria links to Rfam database...	0.51	0.50	0.52	237	1189193	251	38	185	28	239
CRW_00292	SSU_rRNA_bacteria links to Rfam database...	0.41	0.39	0.42	181	1123819	271	41	209	21	280
CRW_00294	-	0.28	0.31	0.26	179	2620222	594	116	388	90	407
CRW_00298	SSU_rRNA_eukarya links to Rfam database...	0.22	0.24	0.21	118	1620334	479	100	348	31	376
CRW_00301	SSU_rRNA_eukarya links to Rfam database...	0.29	0.30	0.29	156	1761959	461	80	308	73	363
CRW_00310	SSU_rRNA_eukarya links to Rfam database...	0.28	0.29	0.27	153	1805378	473	77	342	54	368
CRW_00326	SSU_rRNA_eukarya links to Rfam database...	0.40	0.40	0.39	203	1627589	370	67	251	52	299
CRW_00330	SSU_rRNA_eukarya links to Rfam database...	0.31	0.32	0.30	166	1988453	469	82	314	73	351
CRW_00332	SSU_rRNA_eukarya links to Rfam database...	0.19	0.21	0.18	99	1769473	516	102	347	67	378
CRW_00333	SSU_rRNA_eukarya links to Rfam database...	0.32	0.33	0.31	169	1891947	449	66	303	80	345
CRW_00338	-	0.15	0.17	0.14	67	1052953	418	90	316	12	328
CRW_00345	SSU_rRNA_eukarya links to Rfam database...	0.33	0.34	0.33	171	1586345	407	61	294	52	327
CRW_00348	SSU_rRNA_eukarya links to Rfam database...	0.28	0.28	0.27	142	1614977	433	60	324	49	361
CRW_00358	SSU_rRNA_eukarya links to Rfam database...	0.36	0.37	0.35	186	1674831	392	68	280	44	321
CRW_00366	SSU_rRNA_eukarya links to Rfam database...	0.27	0.29	0.25	138	1579211	437	87	317	33	344
CRW_00370	SSU_rRNA_eukarya links to Rfam database...	0.28	0.29	0.27	148	1640226	440	80	312	48	358
CRW_00371	SSU_rRNA_eukarya links to Rfam database...	0.34	0.35	0.33	173	1611383	414	61	293	60	323
CRW_00372	SSU_rRNA_eukarya links to Rfam database...	0.26	0.28	0.25	137	1625762	453	84	323	46	361
CRW_00374	-	0.31	0.31	0.30	170	2182445	490	57	333	100	380
CRW_00375	-	0.26	0.27	0.25	146	2298853	533	71	370	92	395
CRW_00379	SSU_rRNA_eukarya links to Rfam database...	0.44	0.45	0.44	241	2126401	411	60	251	100	293
CRW_00381	-	0.32	0.33	0.31	186	2303125	522	73	347	102	371
CRW_00386	SSU_rRNA_eukarya links to Rfam database...	0.29	0.30	0.28	155	1750699	443	74	328	41	360
CRW_00400	-	0.25	0.27	0.24	131	2677916	622	66	342	214	363
CRW_00403	SSU_rRNA_eukarya links to Rfam database...	0.33	0.34	0.33	157	1606045	425	57	269	99	307
CRW_00411	SSU_rRNA_eukarya links to Rfam database...	0.35	0.36	0.34	177	1614982	392	60	284	48	319
CRW_00414	SSU_rRNA_eukarya links to Rfam database...	0.29	0.31	0.28	152	1665688	448	68	317	63	343
CRW_00417	-	0.30	0.29	0.32	76	458165	174	28	134	12	186
CRW_00418	-	0.14	0.13	0.15	34	441098	211	19	179	13	226
CRW_00419	-	0.16	0.16	0.17	42	463913	217	25	186	6	223
CRW_00421	-	0.49	0.47	0.51	126	462954	141	24	99	18	140
CRW_00422	-	0.32	0.32	0.33	83	455280	189	26	146	17	180
CRW_00423	-	0.12	0.13	0.12	24	242351	196	35	146	15	165
CRW_00426	-	0.26	0.26	0.26	68	457189	195	30	159	6	197
CRW_00427	-	0.24	0.23	0.25	61	454334	201	29	157	15	200
CRW_00428	-	0.36	0.35	0.36	91	465844	176	24	136	16	169
CRW_00429	-	0.11	0.12	0.11	27	306691	222	37	181	4	206
CRW_00430	-	0.22	0.21	0.22	56	456237	204	35	162	7	210
CRW_00433	-	0.42	0.39	0.45	102	467799	136	13	114	9	161
CRW_00434	-	0.40	0.38	0.42	100	457206	144	18	122	4	163
CRW_00435	-	0.32	0.31	0.34	83	451478	174	21	143	10	182
CRW_00437	-	0.22	0.22	0.23	57	456240	202	25	168	9	203
CRW_00438	-	0.19	0.19	0.20	50	454329	210	25	177	8	218
CRW_00441	-	0.24	0.22	0.25	58	454352	180	18	153	9	204
CRW_00442	-	0.32	0.31	0.33	82	453381	173	35	130	8	179
CRW_00443	-	0.24	0.23	0.25	59	456251	195	29	151	15	201
CRW_00444	-	0.32	0.30	0.34	80	459124	164	21	136	7	183
CRW_00445	-	0.32	0.30	0.33	80	458162	171	27	134	10	185
CRW_00446	-	0.27	0.26	0.27	70	468738	204	30	158	16	195
CRW_00447	-	0.31	0.30	0.31	79	452419	195	25	153	17	181
CRW_00448	-	0.39	0.38	0.41	98	457205	160	18	125	17	163
CRW_00449	-	0.33	0.33	0.34	85	444846	172	31	134	7	175
CRW_00451	-	0.24	0.24	0.25	63	457195	200	28	160	12	201
CRW_00452	-	0.23	0.22	0.25	57	453397	191	26	148	17	205
CRW_00453	-	0.33	0.32	0.34	83	452432	168	28	133	7	178
CRW_00458	-	0.43	0.44	0.43	115	464864	165	23	128	14	149
CRW_00459	-	0.29	0.28	0.30	74	461992	195	26	149	20	189
CRW_00460	-	0.30	0.30	0.29	164	1972529	486	53	345	88	380
CRW_00462	-	0.24	0.23	0.25	59	458166	189	26	152	11	202
CRW_00463	-	0.37	0.36	0.38	92	445795	161	27	126	8	162
CRW_00464	-	0.41	0.38	0.43	101	462008	144	14	118	12	163
CRW_00466	SSU_rRNA_bacteria links to Rfam database...	0.57	0.56	0.57	257	1116315	221	28	165	28	201
CRW_00474	-	0.53	0.54	0.53	452	3976751	450	66	341	43	384
CRW_00476	-	0.41	0.41	0.41	363	4278379	566	74	459	33	516
CRW_00487	-	0.55	0.54	0.55	475	4223009	426	72	315	39	397
CRW_00488	-	0.39	0.39	0.39	344	4325323	574	76	468	30	542
CRW_00490	-	0.34	0.34	0.33	296	4144871	628	83	510	35	566
CRW_00496	-	0.45	0.45	0.46	389	4194006	493	45	416	32	477
CRW_00499	-	0.47	0.47	0.47	419	4372520	494	54	410	30	464
CRW_00503	-	0.42	0.43	0.41	372	4252089	559	75	450	34	495
CRW_00507	-	0.44	0.44	0.44	381	4173736	517	68	420	29	484
CRW_00509	-	0.37	0.37	0.37	325	4182395	593	79	479	35	542
CRW_00511	-	0.43	0.43	0.43	365	4107562	511	57	427	27	491
CRW_00512	-	0.58	0.58	0.58	475	3814889	373	63	276	34	344
CRW_00518	-	0.35	0.35	0.35	312	4357745	592	72	499	21	572
CRW_00521	-	0.28	0.29	0.27	241	4136249	656	103	533	20	603
CRW_00525	-	0.25	0.26	0.24	214	4058921	736	78	612	46	599
CRW_00530	-	0.21	0.24	0.19	64	534765	273	67	199	7	204
CRW_00535	-	0.29	0.31	0.26	103	898081	308	73	213	22	225
CRW_00538	-	0.33	0.35	0.31	104	811840	258	55	176	27	196
CRW_00547	-	0.47	0.48	0.47	413	4278393	509	68	401	40	450
CRW_00589	SSU_rRNA_bacteria links to Rfam database...	0.30	0.30	0.31	133	1094029	317	35	263	19	312
CRW_00590	SSU_rRNA_bacteria links to Rfam database...	0.42	0.42	0.42	191	1119306	279	34	225	20	261
CRW_00591	SSU_rRNA_bacteria links to Rfam database...	0.50	0.50	0.50	222	1098458	256	20	203	33	224
CRW_00594	-	0.28	0.29	0.26	116	1028450	360	57	272	31	279
CRW_00596	-	0.21	0.23	0.20	87	1024171	354	57	281	16	299
CRW_00598	SSU_rRNA_eukarya links to Rfam database...	0.35	0.37	0.34	181	1665691	415	68	285	62	310
CRW_00599	-	0.38	0.39	0.38	212	3754606	721	58	294	369	334
CRW_00604	-	0.88	0.89	0.87	72	411695	196	2	9	185	9
CRW_00605	-	0.71	0.70	0.72	49	183853	124	2	17	105	21
CRW_00606	-	0.84	0.84	0.84	77	559061	255	5	10	240	15
CRW_00607	-	0.52	0.52	0.51	40	536052	283	11	27	245	37
CRW_00608	-	0.70	0.67	0.73	53	35705	30	0	20	10	26
CRW_00610	Intron_gpI links to Rfam database...	0.43	0.43	0.42	35	36232	49	9	39	1	46
CRW_00612	-	0.47	0.47	0.47	44	270386	189	5	45	139	49
CRW_00613	Intron_gpI links to Rfam database...	0.89	0.85	0.93	66	34909	13	0	5	8	12
CRW_00614	Intron_gpI links to Rfam database...	0.13	0.16	0.11	9	121688	143	18	56	69	48
CRW_00617	-	0.31	0.34	0.28	22	426347	269	11	46	212	42
CRW_00619	Intron_gpI links to Rfam database...	0.36	0.37	0.34	27	164946	145	7	45	93	46
CRW_00620	Intron_gpI links to Rfam database...	0.26	0.30	0.23	19	150891	164	18	47	99	44
CRW_00621	Intron_gpI links to Rfam database...	0.41	0.41	0.42	29	153112	137	9	31	97	42
CRW_00623	Intron_gpI links to Rfam database...	0.19	0.19	0.20	16	129714	133	15	50	68	67
CRW_00626	-	0.53	0.58	0.50	60	100904	78	21	40	17	44
CRW_00629	-	0.52	0.52	0.52	63	91256	62	12	47	3	59
CRW_00633	Intron_gpI links to Rfam database...	0.44	0.43	0.44	46	63441	61	13	46	2	60
CRW_00635	-	0.46	0.45	0.46	62	109143	85	9	64	12	75
CRW_00637	-	0.25	0.26	0.25	41	133736	132	16	110	6	117
CRW_00641	-	0.67	0.72	0.62	55	39814	34	12	22	0	21
CRW_00642	-	0.52	0.57	0.47	37	47199	51	9	33	9	28
CRW_00643	-	0.41	0.46	0.36	56	123101	109	32	67	10	66
CRW_00645	-	0.53	0.55	0.51	37	35438	45	6	30	9	30
CRW_00646	-	0.50	0.53	0.48	34	34909	42	9	28	5	30
CRW_00648	-	0.38	0.39	0.37	57	137921	103	20	77	6	91
CRW_00649	-	0.82	0.81	0.83	101	204358	111	2	19	90	23
CRW_00650	-	0.43	0.43	0.42	61	112906	89	9	74	6	81
CRW_00652	-	0.42	0.46	0.38	60	132199	114	14	82	18	70
CRW_00654	-	0.77	0.75	0.79	93	78093	29	3	21	5	31
CRW_00655	-	0.84	0.81	0.87	101	89137	21	6	9	6	23
CRW_00659	-	0.45	0.49	0.41	30	32312	52	14	29	9	31
CRW_00661	-	0.06	0.08	0.06	4	24240	68	21	45	2	47
CRW_00662	-	0.39	0.40	0.39	26	28613	48	8	33	7	39
CRW_00663	-	0.00	0.00	0.00	0	26031	76	12	63	1	61
CRW_00664	-	0.11	0.13	0.09	10	53517	102	30	71	1	68
CRW_00665	-	0.11	0.13	0.11	6	23596	57	16	35	6	42
CRW_00666	-	0.38	0.40	0.37	51	96002	93	15	73	5	75
CRW_00668	-	0.49	0.51	0.47	76	163717	104	20	65	19	74
CRW_00669	-	0.38	0.39	0.37	46	97336	82	20	59	3	73
CRW_00670	Intron_gpI links to Rfam database...	0.54	0.55	0.54	66	70002	59	12	45	2	54
CRW_00671	Intron_gpI links to Rfam database...	0.71	0.68	0.74	79	62728	34	1	27	6	38
CRW_00672	Intron_gpI links to Rfam database...	0.75	0.77	0.74	85	72275	40	6	24	10	26
CRW_00674	Intron_gpI links to Rfam database...	0.66	0.67	0.66	83	83310	52	9	34	9	41
CRW_00676	Intron_gpI links to Rfam database...	0.55	0.57	0.54	66	93405	75	12	45	18	49
CRW_00677	-	0.54	0.58	0.51	61	71890	64	13	46	5	44
CRW_00678	-	0.43	0.46	0.39	56	666292	324	18	69	237	65
CRW_00679	-	0.39	0.39	0.39	42	76527	74	14	53	7	65
CRW_00681	-	0.57	0.63	0.51	70	112914	80	25	41	14	42
CRW_00684	-	0.36	0.41	0.33	55	612002	303	40	74	189	80
CRW_00685	-	0.36	0.40	0.33	42	156952	120	20	66	34	64
CRW_00687	-	0.66	0.71	0.62	47	28604	33	7	22	4	19
CRW_00689	-	0.59	0.62	0.56	48	33584	40	9	29	2	29
CRW_00690	-	0.67	0.65	0.69	45	33346	26	3	17	6	24
CRW_00691	-	0.54	0.57	0.52	38	27188	36	2	33	1	29
CRW_00692	Intron_gpI links to Rfam database...	0.23	0.24	0.21	22	68530	90	27	56	7	68
CRW_00693	-	0.54	0.56	0.53	68	89124	71	9	52	10	54
CRW_00694	-	0.67	0.66	0.69	81	85787	48	3	34	11	41
CRW_00699	-	0.51	0.52	0.50	65	91676	66	15	50	1	61
CRW_00700	-	0.61	0.62	0.60	91	180750	92	9	51	32	56
CRW_00704	-	0.87	0.87	0.86	82	386665	190	4	9	177	12
CRW_00706	-	0.60	0.68	0.53	40	695535	350	17	18	315	19
CRW_00708	-	0.59	0.64	0.55	42	3457059	774	17	17	740	24
CRW_00709	-	0.03	0.04	0.02	3	1728743	590	35	89	466	82
CRW_00710	-	0.58	0.62	0.54	71	1040272	379	23	37	319	43
CRW_00711	-	0.34	0.38	0.31	47	2318631	636	36	67	533	77
CRW_00712	-	0.47	0.55	0.41	59	952746	390	27	58	305	49
CRW_00713	-	0.77	0.72	0.81	73	731355	309	0	17	292	28
CRW_00714	-	0.44	0.48	0.41	51	186230	139	15	59	65	56
CRW_00715	-	0.74	0.70	0.78	73	69285	25	4	16	5	31
CRW_00716	-	0.69	0.73	0.65	65	193653	118	10	25	83	24
CRW_00717	-	0.67	0.66	0.68	98	153590	65	9	38	18	50
CRW_00718	-	0.70	0.70	0.70	133	189846	72	3	54	15	58
CRW_00719	-	0.50	0.52	0.49	47	230085	155	12	37	106	44
CRW_00721	-	0.58	0.62	0.54	42	58575	65	11	25	29	26
CRW_00723	-	0.46	0.54	0.39	40	1583207	517	24	39	454	34
CRW_00758	SSU_rRNA_eukarya links to Rfam database...	0.25	0.26	0.24	127	1640244	444	62	333	49	356
CRW_00759	SSU_rRNA_eukarya links to Rfam database...	0.31	0.32	0.29	156	1636612	443	67	310	66	325
CRW_00760	SSU_rRNA_eukarya links to Rfam database...	0.27	0.29	0.26	140	1638417	454	75	323	56	346
CRW_00761	-	0.18	0.20	0.17	93	2863859	739	102	367	270	381
CRW_00763	SSU_rRNA_bacteria links to Rfam database...	0.20	0.20	0.20	90	1215568	391	45	317	29	356
CRW_00764	-	0.10	0.10	0.10	20	252906	197	37	153	7	176
CRW_00766	-	0.25	0.25	0.26	60	440159	189	16	156	17	180
CRW_00768	-	0.54	0.53	0.56	136	471665	136	16	89	31	123
CRW_00769	-	0.54	0.53	0.54	134	451477	134	23	91	20	118
CRW_00772	SSU_rRNA_bacteria links to Rfam database...	0.25	0.25	0.25	100	945594	319	37	269	13	304
CRW_00774	-	0.36	0.35	0.38	91	488329	164	18	128	18	172
CRW_00775	-	0.13	0.14	0.12	29	314570	228	56	166	6	183
CRW_00778	SSU_rRNA_bacteria links to Rfam database...	0.27	0.28	0.26	107	1201617	345	45	256	44	277
CRW_00779	-	0.31	0.31	0.31	129	1031345	316	42	250	24	293
CRW_00780	-	0.25	0.24	0.26	60	475567	188	23	150	15	195
CRW_00781	-	0.24	0.26	0.22	115	1978539	519	81	320	118	335
CRW_00783	-	0.23	0.23	0.23	60	453368	207	23	177	7	199
CRW_00784	-	0.27	0.27	0.28	70	456240	194	30	150	14	192
CRW_00785	-	0.29	0.27	0.30	69	452448	173	17	142	14	184
CRW_00787	-	0.29	0.29	0.29	89	646643	234	33	188	13	217
CRW_00788	-	0.22	0.23	0.21	84	1758353	510	56	257	197	277
CRW_00789	SSU_rRNA_bacteria links to Rfam database...	0.39	0.38	0.39	172	1137342	303	31	241	31	275
CRW_00790	-	0.25	0.27	0.23	120	1803531	489	65	334	90	327
CRW_00792	-	0.24	0.25	0.23	95	1581110	472	71	255	146	288
CRW_00793	-	0.39	0.40	0.38	152	1048673	299	48	203	48	225
CRW_00794	-	0.28	0.28	0.28	70	434531	199	17	160	22	176
CRW_00795	SSU_rRNA_bacteria links to Rfam database...	0.32	0.33	0.30	130	1152494	342	43	254	45	264
CRW_00796	-	0.40	0.38	0.42	89	384792	147	9	113	25	146
CRW_00797	-	0.39	0.39	0.39	133	692912	235	25	183	27	209
CRW_00800	SSU_rRNA_eukarya links to Rfam database...	0.52	0.52	0.52	243	1401506	300	34	192	74	227
CRW_00801	-	0.35	0.35	0.35	86	438269	178	26	135	17	163
CRW_00802	-	0.22	0.22	0.21	56	460057	221	35	172	14	197
CRW_00804	-	0.28	0.28	0.27	114	1420031	431	54	256	121	289
CRW_00807	-	0.35	0.35	0.34	140	1391539	376	33	234	109	258
CRW_00808	-	0.31	0.34	0.29	120	1301275	391	84	212	95	236
CRW_00815	-	0.68	0.69	0.68	109	159734	64	14	38	12	49
CRW_00816	-	0.41	0.43	0.40	55	143777	103	13	71	19	74
CRW_00820	-	0.52	0.52	0.52	75	136358	95	8	62	25	70
CRW_00849	SSU_rRNA_bacteria links to Rfam database...	0.53	0.53	0.52	250	1117779	255	29	202	24	220
CRW_01134	-	0.34	0.34	0.34	144	964931	297	39	241	17	283
CRW_01153	SSU_rRNA_eukarya links to Rfam database...	0.36	0.37	0.35	187	1605990	391	60	291	40	316
CRW_01168	-	0.38	0.38	0.38	156	900737	282	38	222	22	255
CRW_01171	SSU_rRNA_eukarya links to Rfam database...	0.28	0.28	0.27	143	1593476	430	75	311	44	363
CRW_01186	-	0.26	0.26	0.25	100	836177	308	34	260	14	286
CRW_01188	-	0.18	0.18	0.17	72	837448	352	58	287	7	321
CRW_01189	-	0.16	0.16	0.16	64	862233	359	43	301	15	328
CRW_01214	-	0.25	0.25	0.25	101	931894	308	40	260	8	304
CRW_01222	-	0.26	0.26	0.26	104	912871	314	56	245	13	293
CRW_01250	-	0.44	0.44	0.43	165	781495	235	32	183	20	213
CRW_01260	-	0.11	0.12	0.11	46	912863	372	54	313	5	347
CRW_01266	-	0.29	0.30	0.28	114	818158	296	43	245	8	267
CRW_01275	-	0.33	0.34	0.33	147	1082206	327	50	253	24	285
CRW_01283	-	0.22	0.22	0.22	92	963553	336	44	277	15	317
CRW_01300	SSU_rRNA_eukarya links to Rfam database...	0.28	0.29	0.27	150	1693165	443	63	342	38	365
CRW_01314	-	0.24	0.23	0.24	94	937373	309	32	266	11	313
CRW_01343	SSU_rRNA_archaea links to Rfam database...	0.37	0.36	0.38	158	977486	272	36	221	15	276
CRW_01344	-	0.30	0.31	0.30	112	791539	272	37	223	12	254
CRW_01456	-	0.29	0.29	0.28	251	4240442	660	81	554	25	600
PDB_00018	-	0.20	0.20	0.22	4	1017	14	2	12	0	16
PDB_00020	-	0.75	0.65	0.87	13	765	2	0	2	0	7
PDB_00056	-	0.93	0.88	1.00	14	616	0	0	0	0	2
PDB_00072	-	0.38	0.39	0.38	81	148025	134	10	124	0	129
PDB_00078	-	0.40	0.38	0.41	44	49663	63	5	58	0	71
PDB_00079	-	0.49	0.49	0.50	69	121634	92	11	57	24	73
PDB_00123	-	-0.01	0.00	0.00	0	4151	35	0	35	0	36
PDB_00138	-	0.79	0.63	1.00	5	373	0	0	0	0	3
PDB_00209	-	0.56	0.45	0.71	5	554	2	0	2	0	6
PDB_00243	-	0.63	0.58	0.70	7	620	3	0	3	0	5
PDB_00278	-	0.06	0.07	0.06	5	24899	72	3	69	0	67
PDB_00352	-	0.39	0.37	0.44	7	1209	9	0	9	0	12
PDB_00401	-	0.43	0.41	0.45	388	3996522	500	57	411	32	565
PDB_00403	-	0.49	0.50	0.49	76	124595	93	17	62	14	77
PDB_00423	-	0.16	0.16	0.16	12	26723	61	6	55	0	62
PDB_00447	-	0.27	0.25	0.30	11	7103	26	6	20	0	33
PDB_00571	tRNA links to Rfam database...	0.85	0.76	0.95	19	3301	1	1	0	0	6
PDB_00675	-	0.44	0.42	0.47	408	4167964	494	55	401	38	566
PDB_00701	-	0.10	0.10	0.10	11	45343	97	9	88	0	98
PDB_00703	SSU_rRNA_bacteria links to Rfam database...	0.48	0.46	0.50	229	1073385	256	28	203	25	266
PDB_00704	-	0.42	0.40	0.45	391	4249194	518	66	419	33	582
PDB_00713	-	0.43	0.43	0.45	9	1996	11	0	11	0	12
PDB_00716	HDV_ribozyme links to Rfam database...	-0.01	0.00	0.00	0	2678	24	1	22	1	23
PDB_00747	-	0.63	0.58	0.69	46	24464	22	0	21	1	34
PDB_00805	-	0.62	0.61	0.63	183	467737	137	13	95	29	119
PDB_00827	Intron_gpI links to Rfam database...	0.65	0.59	0.72	48	26961	21	0	19	2	33
PDB_00828	Purine links to Rfam database...	0.88	0.78	1.00	21	2464	0	0	0	0	6
PDB_00829	Purine links to Rfam database...	0.86	0.75	1.00	18	2260	0	0	0	0	6
PDB_00854	SSU_rRNA_bacteria links to Rfam database...	0.46	0.46	0.46	246	1500244	334	36	252	46	289
PDB_00874	-	0.09	0.10	0.11	2	928	16	2	14	0	18
PDB_00886	-	-0.01	0.00	0.00	0	4148	38	0	38	0	40
PDB_00917	-	0.47	0.45	0.50	43	35159	50	3	40	7	52
PDB_00919	RNaseP_bact_a links to Rfam database...	0.52	0.48	0.56	49	44166	42	4	34	4	54
PDB_01009	tRNA links to Rfam database...	0.46	0.52	0.41	11	2458	16	5	11	0	10
PDB_01040	-	0.30	0.30	0.32	6	1109	13	0	13	0	14
PDB_01070	-	0.68	0.63	0.74	34	12674	12	0	12	0	20
PDB_01088	SSU_rRNA_bacteria links to Rfam database...	0.34	0.33	0.34	180	1470946	368	36	308	24	367
PDB_01092	glmS links to Rfam database...	0.73	0.63	0.85	33	10114	8	0	6	2	19
PDB_01103	SSU_rRNA_bacteria links to Rfam database...	0.44	0.44	0.44	245	1605966	343	42	275	26	317
PDB_01105	SSU_rRNA_bacteria links to Rfam database...	0.46	0.45	0.47	245	1433450	306	32	244	30	295
PDB_01120	SSU_rRNA_bacteria links to Rfam database...	0.31	0.30	0.33	158	1204643	339	37	290	12	369
PDB_01129	-	0.42	0.45	0.39	32	35429	54	21	29	4	39
PDB_01140	-	0.52	0.51	0.54	475	4176612	456	57	351	48	455
PDB_01157	-	0.20	0.20	0.19	20	49983	83	9	74	0	78
PDB_01166	-	0.51	0.49	0.53	103	181912	97	14	77	6	109
PDB_01260	-	0.58	0.48	0.71	12	1813	5	1	4	0	13
PDB_01261	-	0.59	0.54	0.64	182	467742	108	6	98	4	154
PDB_01273	SSU_rRNA_bacteria links to Rfam database...	0.38	0.38	0.39	186	1117784	320	28	262	30	305
PDB_01281	-	-0.03	0.00	0.00	0	366	12	0	12	0	14
PDB_01299	-	0.74	0.67	0.83	10	891	2	1	1	0	5
PDB_01309	-	-0.01	0.00	0.00	0	9118	62	9	53	0	39
RFA_00597	Telomerase-vert links to Rfam database...	0.27	0.29	0.26	32	97779	107	18	74	15	77
RFA_00599	Telomerase-vert links to Rfam database...	0.73	0.74	0.72	82	101361	60	10	22	28	29
RFA_00601	Telomerase-vert links to Rfam database...	0.42	0.46	0.39	52	99103	95	33	47	15	62
RFA_00602	Telomerase-vert links to Rfam database...	0.60	0.63	0.57	73	101347	77	23	32	22	43
RFA_00632	HDV_ribozyme links to Rfam database...	0.39	0.39	0.39	11	4067	17	2	15	0	17
RFA_00636	HDV_ribozyme links to Rfam database...	0.42	0.43	0.43	12	3977	16	2	14	0	16
RFA_00767	Corona_pk3 links to Rfam database...	0.44	0.44	0.44	8	1873	10	1	9	0	10
RFA_00768	Corona_pk3 links to Rfam database...	0.45	0.44	0.47	8	1874	10	1	8	1	10
RFA_00769	Corona_pk3 links to Rfam database...	0.55	0.56	0.56	10	1935	8	3	5	0	8
RFA_00770	Corona_pk3 links to Rfam database...	0.61	0.56	0.67	10	2001	8	0	5	3	8
RFA_00773	Corona_pk3 links to Rfam database...	0.71	0.56	0.91	10	1942	3	1	0	2	8
RFA_00808	RydC links to Rfam database...	-0.01	0.00	0.00	0	2000	18	2	14	2	16
RFA_00809	RydC links to Rfam database...	0.37	0.38	0.38	6	2129	10	1	9	0	10
TMR_00038	tmRNA links to Rfam database...	0.12	0.13	0.11	14	71131	112	12	96	4	96
TMR_00046	tmRNA links to Rfam database...	0.27	0.28	0.26	27	62732	80	11	65	4	69
TMR_00047	tmRNA links to Rfam database...	0.28	0.33	0.24	19	48438	76	15	44	17	38
TMR_00048	tmRNA links to Rfam database...	0.23	0.24	0.22	23	64877	85	17	63	5	72
TMR_00049	tmRNA links to Rfam database...	0.56	0.57	0.54	50	63097	55	11	32	12	37
TMR_00051	tmRNA links to Rfam database...	0.72	0.68	0.77	64	65620	40	4	15	21	30
TMR_00055	tmRNA links to Rfam database...	0.25	0.26	0.24	30	78876	97	22	75	0	84
TMR_00064	tmRNA links to Rfam database...	0.48	0.50	0.45	52	76913	63	26	37	0	51
TMR_00073	tmRNA links to Rfam database...	0.51	0.50	0.53	58	65594	52	10	41	1	59
TMR_00076	tmRNA links to Rfam database...	0.38	0.40	0.36	40	70765	79	16	55	8	60
TMR_00106	tmRNA links to Rfam database...	0.28	0.28	0.27	34	89975	95	17	74	4	86
TMR_00144	tmRNA links to Rfam database...	0.19	0.20	0.19	21	74193	96	14	77	5	82
TMR_00150	tmRNA links to Rfam database...	0.71	0.71	0.71	30	43029	52	2	10	40	12
TMR_00179	tmRNA links to Rfam database...	0.44	0.46	0.42	45	67055	68	15	46	7	53
TMR_00199	tmRNA links to Rfam database...	0.56	0.59	0.54	54	62735	55	20	26	9	38
TMR_00223	tmRNA links to Rfam database...	0.27	0.27	0.27	26	64163	77	15	57	5	69
TMR_00238	tmRNA links to Rfam database...	0.30	0.34	0.28	34	84543	97	18	71	8	67
TMR_00239	tmRNA links to Rfam database...	0.49	0.50	0.48	48	61675	59	10	43	6	48
TMR_00246	-	0.54	0.62	0.47	21	78165	117	6	18	93	13
TMR_00274	tmRNA links to Rfam database...	0.38	0.38	0.37	40	66688	73	11	56	6	65
TMR_00279	tmRNA links to Rfam database...	0.52	0.53	0.50	50	68906	60	8	42	10	44
TMR_00283	tmRNA links to Rfam database...	0.56	0.56	0.56	54	65245	52	8	34	10	42
TMR_00310	tmRNA links to Rfam database...	0.30	0.31	0.30	30	63804	78	12	57	9	68
TMR_00317	tmRNA links to Rfam database...	0.64	0.67	0.62	68	68155	47	6	36	5	34
TMR_00352	tmRNA links to Rfam database...	0.34	0.39	0.31	29	95172	98	19	46	33	46
TMR_00409	tmRNA links to Rfam database...	0.76	0.78	0.73	36	68586	74	5	8	61	10
TMR_00411	tmRNA links to Rfam database...	0.66	0.64	0.68	56	60993	40	8	18	14	31
TMR_00415	tmRNA links to Rfam database...	0.44	0.44	0.45	44	67064	56	8	45	3	57
TMR_00419	tmRNA links to Rfam database...	0.52	0.50	0.55	55	81710	64	5	40	19	56
TMR_00422	tmRNA links to Rfam database...	0.57	0.58	0.56	53	67801	56	10	32	14	39
TMR_00458	tmRNA links to Rfam database...	0.49	0.49	0.48	46	63451	56	10	39	7	47
TMR_00478	tmRNA links to Rfam database...	0.17	0.19	0.16	19	71892	106	20	79	7	80
TMR_00553	tmRNA links to Rfam database...	0.38	0.37	0.39	30	48128	53	3	44	6	51
TMR_00560	tmRNA links to Rfam database...	0.55	0.54	0.56	53	60980	53	3	39	11	45
TMR_00568	tmRNA links to Rfam database...	0.35	0.34	0.36	34	60632	66	5	55	6	65
TMR_00579	tmRNA links to Rfam database...	0.24	0.28	0.21	25	80481	106	23	72	11	65
TMR_00581	tmRNA links to Rfam database...	0.35	0.35	0.35	34	62385	67	9	53	5	64
TMR_00587	tmRNA links to Rfam database...	0.73	0.72	0.75	72	61329	31	5	19	7	28
TMR_00588	tmRNA links to Rfam database...	0.24	0.26	0.23	26	77307	97	21	67	9	75
TMR_00594	tmRNA links to Rfam database...	0.14	0.14	0.13	15	79285	106	24	77	5	89
TMR_00596	tmRNA links to Rfam database...	0.27	0.28	0.27	27	78109	88	17	57	14	68
TMR_00600	tmRNA links to Rfam database...	0.21	0.22	0.20	25	79677	100	14	84	2	90
TMR_00603	tmRNA links to Rfam database...	0.62	0.60	0.63	26	60337	76	3	12	61	17
TMR_00606	tmRNA links to Rfam database...	0.40	0.40	0.39	43	68896	75	6	61	8	64
TMR_00625	tmRNA links to Rfam database...	0.40	0.42	0.39	44	78889	79	19	51	9	62
TMR_00706	tmRNA links to Rfam database...	0.59	0.56	0.62	58	66337	38	7	28	3	45
TMR_00712	tmRNA links to Rfam database...	0.30	0.32	0.28	35	78483	88	19	69	0	74

^top

Performance of Afold - scored lower in this pairwise comparison

1. Total counts & total scores for Afold

Total Base Pair Counts
Total TP	50595
Total TN	313211807
Total FP	87657
Total FP CONTRA	11431
Total FP INCONS	61126
Total FP COMP	15100
Total FN	74017

Total Scores
MCC	0.408
Average MCC ± 95% Confidence Intervals	0.443 ± 0.015
Sensitivity	0.406
Positive Predictive Value	0.411
Nr of predictions	595

^top

2. Individual counts for Afold [ download as .csv ]

RNA Chain	Rfam family	MCC	SENS	PPV	TP	TN	FP	FP CONTRA	FP INCONS	FP COMP	FN
ASE_00001	RNaseP_arch links to Rfam database...	0.75	0.72	0.78	54	34122	23	3	12	8	21
ASE_00002	RNaseP_arch links to Rfam database...	0.62	0.62	0.63	45	35439	33	4	23	6	28
ASE_00004	RNaseP_bact_a links to Rfam database...	0.51	0.52	0.51	50	47797	49	10	38	1	47
ASE_00005	RNaseP_bact_a links to Rfam database...	0.61	0.56	0.66	66	57870	39	0	34	5	51
ASE_00006	RNaseP_bact_a links to Rfam database...	0.66	0.67	0.65	62	47491	36	7	26	3	31
ASE_00007	RNaseP_bact_a links to Rfam database...	0.56	0.53	0.59	58	59586	45	1	40	4	52
ASE_00009	RNaseP_arch links to Rfam database...	0.79	0.76	0.82	51	26044	13	0	11	2	16
ASE_00012	RNaseP_bact_a links to Rfam database...	0.41	0.39	0.43	48	73808	72	1	63	8	75
ASE_00014	RNaseP_arch links to Rfam database...	0.24	0.25	0.24	26	54178	82	8	73	1	80
ASE_00017	RNaseP_nuc links to Rfam database...	0.26	0.28	0.24	18	50965	74	6	51	17	46
ASE_00020	RNaseP_bact_a links to Rfam database...	0.57	0.54	0.60	68	73807	46	6	39	1	58
ASE_00021	RNaseP_bact_a links to Rfam database...	0.54	0.51	0.59	81	104058	66	7	50	9	79
ASE_00023	RNaseP_bact_a links to Rfam database...	0.66	0.64	0.69	81	84137	42	3	34	5	46
ASE_00028	RNaseP_bact_b links to Rfam database...	0.58	0.56	0.61	70	84551	54	4	41	9	56
ASE_00029	RNaseP_bact_a links to Rfam database...	0.55	0.53	0.56	65	82912	55	5	46	4	57
ASE_00030	RNaseP_bact_a links to Rfam database...	0.61	0.59	0.63	85	85357	50	5	44	1	60
ASE_00032	RNaseP_bact_a links to Rfam database...	0.55	0.53	0.58	62	80094	50	6	38	6	56
ASE_00033	RNaseP_bact_a links to Rfam database...	0.33	0.31	0.36	38	64874	70	4	64	2	83
ASE_00036	RNaseP_bact_a links to Rfam database...	0.41	0.39	0.43	52	75735	71	8	60	3	80
ASE_00037	RNaseP_bact_a links to Rfam database...	0.34	0.32	0.37	35	59245	63	0	60	3	75
ASE_00038	RNaseP_bact_a links to Rfam database...	0.53	0.52	0.54	53	53529	48	4	42	2	48
ASE_00040	RNaseP_bact_a links to Rfam database...	0.50	0.47	0.53	63	78883	63	5	52	6	70
ASE_00041	RNaseP_bact_a links to Rfam database...	0.53	0.51	0.55	55	57530	51	2	43	6	53
ASE_00042	RNaseP_bact_a links to Rfam database...	0.44	0.42	0.47	61	89969	73	3	67	3	84
ASE_00044	RNaseP_bact_a links to Rfam database...	0.74	0.70	0.78	74	54520	26	3	18	5	31
ASE_00046	RNaseP_bact_a links to Rfam database...	0.59	0.55	0.63	57	50313	33	2	31	0	46
ASE_00047	RNaseP_bact_a links to Rfam database...	0.40	0.38	0.43	50	74188	68	4	63	1	80
ASE_00053	RNaseP_bact_a links to Rfam database...	0.54	0.52	0.56	69	79278	61	12	42	7	64
ASE_00056	-	0.34	0.35	0.34	25	30803	52	4	44	4	47
ASE_00064	RNaseP_bact_a links to Rfam database...	0.43	0.43	0.44	38	45364	54	5	44	5	51
ASE_00066	RNaseP_bact_a links to Rfam database...	0.57	0.55	0.59	71	72269	52	4	46	2	59
ASE_00068	RNaseP_bact_a links to Rfam database...	0.33	0.32	0.36	27	37599	50	2	47	1	58
ASE_00074	RNaseP_bact_a links to Rfam database...	0.48	0.47	0.50	56	67784	57	7	49	1	63
ASE_00075	RNaseP_bact_a links to Rfam database...	0.65	0.59	0.72	95	108679	46	3	34	9	67
ASE_00076	RNaseP_bact_a links to Rfam database...	0.57	0.54	0.61	64	68160	42	7	34	1	54
ASE_00077	RNaseP_bact_a links to Rfam database...	0.52	0.51	0.54	44	45068	39	6	32	1	42
ASE_00078	RNaseP_bact_a links to Rfam database...	0.67	0.67	0.67	56	42988	32	5	22	5	27
ASE_00079	RNaseP_bact_a links to Rfam database...	0.50	0.48	0.52	48	55519	45	2	42	1	52
ASE_00080	RNaseP_bact_a links to Rfam database...	0.50	0.48	0.52	59	71518	59	3	51	5	64
ASE_00081	RNaseP_bact_a links to Rfam database...	0.46	0.45	0.46	44	49675	53	5	46	2	53
ASE_00082	RNaseP_bact_a links to Rfam database...	0.57	0.54	0.61	63	70396	51	1	40	10	53
ASE_00083	RNaseP_bact_a links to Rfam database...	0.71	0.67	0.76	74	62383	32	1	23	8	36
ASE_00084	RNaseP_bact_a links to Rfam database...	0.72	0.71	0.73	70	53532	30	6	20	4	29
ASE_00087	RNaseP_bact_a links to Rfam database...	0.56	0.51	0.61	74	88288	54	5	43	6	70
ASE_00089	-	0.39	0.37	0.41	29	31305	45	0	41	4	50
ASE_00090	RNaseP_bact_a links to Rfam database...	0.46	0.47	0.47	47	55510	59	6	48	5	54
ASE_00092	RNaseP_bact_a links to Rfam database...	0.68	0.65	0.72	73	63444	35	3	26	6	40
ASE_00096	RNaseP_bact_a links to Rfam database...	0.51	0.50	0.53	57	63439	51	2	48	1	58
ASE_00104	RNaseP_bact_a links to Rfam database...	0.53	0.50	0.56	60	64153	49	8	40	1	59
ASE_00111	RNaseP_nuc links to Rfam database...	0.15	0.19	0.12	11	49992	89	31	52	6	46
ASE_00112	RNaseP_bact_a links to Rfam database...	0.77	0.72	0.82	84	75364	25	5	13	7	32
ASE_00115	RNaseP_bact_a links to Rfam database...	0.55	0.54	0.56	55	54517	51	1	42	8	46
ASE_00116	RNaseP_arch links to Rfam database...	0.24	0.24	0.23	16	31557	54	8	45	1	50
ASE_00118	RNaseP_bact_a links to Rfam database...	0.38	0.38	0.39	39	60625	64	5	57	2	63
ASE_00119	RNaseP_bact_a links to Rfam database...	0.63	0.60	0.67	65	62738	35	1	31	3	43
ASE_00120	RNaseP_arch links to Rfam database...	0.37	0.35	0.38	33	46885	53	9	44	0	61
ASE_00121	RNaseP_arch links to Rfam database...	0.29	0.29	0.29	27	45058	65	8	57	0	65
ASE_00122	RNaseP_bact_a links to Rfam database...	0.28	0.27	0.29	24	43283	60	4	54	2	64
ASE_00123	RNaseP_bact_a links to Rfam database...	0.44	0.42	0.46	36	38425	48	3	39	6	49
ASE_00125	RNaseP_bact_a links to Rfam database...	0.64	0.63	0.65	55	39255	32	4	26	2	33
ASE_00126	RNaseP_bact_a links to Rfam database...	0.74	0.74	0.73	61	40387	27	3	19	5	21
ASE_00128	RNaseP_bact_a links to Rfam database...	0.74	0.72	0.77	72	53207	30	2	20	8	28
ASE_00129	RNaseP_bact_a links to Rfam database...	0.77	0.74	0.80	82	62732	26	3	18	5	29
ASE_00131	RNaseP_bact_a links to Rfam database...	0.62	0.55	0.70	47	39273	31	0	20	11	38
ASE_00132	RNaseP_bact_a links to Rfam database...	0.63	0.61	0.65	58	50314	34	7	24	3	37
ASE_00134	RNaseP_bact_a links to Rfam database...	0.43	0.42	0.44	40	50313	54	7	43	4	55
ASE_00135	RNaseP_bact_a links to Rfam database...	0.45	0.44	0.45	48	63084	63	8	50	5	61
ASE_00136	RNaseP_bact_a links to Rfam database...	0.69	0.65	0.72	60	48122	28	3	20	5	32
ASE_00137	RNaseP_bact_a links to Rfam database...	0.44	0.43	0.45	42	48423	53	4	47	2	56
ASE_00138	RNaseP_bact_a links to Rfam database...	0.51	0.49	0.53	40	40395	36	4	31	1	41
ASE_00139	RNaseP_bact_a links to Rfam database...	0.83	0.77	0.89	80	54195	16	2	8	6	24
ASE_00140	RNaseP_bact_a links to Rfam database...	0.62	0.57	0.67	71	70770	38	6	29	3	54
ASE_00145	RNaseP_arch links to Rfam database...	0.40	0.40	0.40	44	70016	69	9	56	4	67
ASE_00146	RNaseP_bact_a links to Rfam database...	0.55	0.52	0.59	64	70768	50	2	42	6	60
ASE_00148	RNaseP_arch links to Rfam database...	0.63	0.60	0.65	93	112433	53	4	45	4	61
ASE_00151	RNaseP_bact_a links to Rfam database...	0.26	0.26	0.27	25	51912	66	9	57	0	73
ASE_00153	RNaseP_nuc links to Rfam database...	0.66	0.67	0.65	49	57555	68	2	24	42	24
ASE_00154	RNaseP_arch links to Rfam database...	0.57	0.55	0.58	59	65240	45	4	38	3	48
ASE_00155	RNaseP_arch links to Rfam database...	0.50	0.48	0.52	68	93396	69	10	54	5	74
ASE_00163	RNaseP_bact_a links to Rfam database...	0.64	0.63	0.66	59	53211	43	4	27	12	34
ASE_00165	RNaseP_bact_a links to Rfam database...	0.64	0.60	0.67	61	52884	31	5	25	1	40
ASE_00168	RNaseP_nuc links to Rfam database...	0.31	0.38	0.25	24	60631	88	24	47	17	40
ASE_00169	RNaseP_bact_a links to Rfam database...	0.49	0.48	0.52	51	57192	52	6	42	4	56
ASE_00170	RNaseP_bact_a links to Rfam database...	0.70	0.68	0.72	63	48740	27	2	23	2	30
ASE_00171	RNaseP_bact_a links to Rfam database...	0.70	0.69	0.71	65	48425	28	5	21	2	29
ASE_00172	RNaseP_bact_a links to Rfam database...	0.62	0.61	0.63	65	58893	41	8	30	3	41
ASE_00174	RNaseP_bact_a links to Rfam database...	0.59	0.57	0.62	62	60975	42	6	32	4	47
ASE_00175	RNaseP_bact_a links to Rfam database...	0.59	0.59	0.59	63	59925	45	7	36	2	44
ASE_00176	RNaseP_bact_a links to Rfam database...	0.60	0.55	0.64	61	59936	38	5	29	4	49
ASE_00179	RNaseP_bact_a links to Rfam database...	0.64	0.65	0.62	55	44164	35	7	27	1	29
ASE_00180	RNaseP_bact_a links to Rfam database...	0.71	0.69	0.74	69	51267	31	2	22	7	31
ASE_00181	RNaseP_bact_a links to Rfam database...	0.54	0.53	0.55	56	57528	52	3	43	6	50
ASE_00182	RNaseP_bact_a links to Rfam database...	0.60	0.58	0.62	79	84128	49	6	42	1	57
ASE_00183	RNaseP_bact_a links to Rfam database...	0.71	0.70	0.72	79	61316	35	2	28	5	34
ASE_00185	RNaseP_bact_a links to Rfam database...	0.72	0.70	0.74	89	73416	38	6	25	7	39
ASE_00186	RNaseP_bact_a links to Rfam database...	0.73	0.69	0.78	91	78887	30	3	22	5	41
ASE_00187	RNaseP_arch links to Rfam database...	0.50	0.48	0.51	55	68528	58	7	45	6	60
ASE_00190	RNaseP_bact_b links to Rfam database...	0.49	0.46	0.52	41	45372	44	7	31	6	49
ASE_00192	RNaseP_bact_b links to Rfam database...	0.40	0.38	0.42	50	84547	75	6	63	6	83
ASE_00196	RNaseP_arch links to Rfam database...	0.76	0.75	0.77	56	31553	21	2	15	4	19
ASE_00197	RNaseP_bact_a links to Rfam database...	0.49	0.46	0.52	67	89123	66	4	59	3	78
ASE_00198	RNaseP_bact_a links to Rfam database...	0.61	0.59	0.64	60	52556	40	6	28	6	42
ASE_00203	RNaseP_bact_a links to Rfam database...	0.70	0.69	0.72	66	46573	26	7	19	0	30
ASE_00209	RNaseP_arch links to Rfam database...	0.29	0.28	0.30	25	42989	57	4	53	0	63
ASE_00210	RNaseP_arch links to Rfam database...	0.61	0.62	0.60	40	27194	28	6	21	1	25
ASE_00212	RNaseP_bact_a links to Rfam database...	0.70	0.67	0.74	99	93827	39	3	32	4	49
ASE_00213	RNaseP_arch links to Rfam database...	0.72	0.71	0.73	47	27197	18	3	14	1	19
ASE_00214	RNaseP_bact_a links to Rfam database...	0.72	0.72	0.73	74	56178	36	4	24	8	29
ASE_00215	RNaseP_bact_a links to Rfam database...	0.54	0.51	0.57	50	48429	39	4	33	2	49
ASE_00216	RNaseP_bact_a links to Rfam database...	0.67	0.68	0.66	56	39255	31	9	20	2	26
ASE_00217	RNaseP_bact_a links to Rfam database...	0.40	0.37	0.45	33	40396	48	3	38	7	57
ASE_00221	RNaseP_bact_a links to Rfam database...	0.49	0.45	0.54	53	64522	48	3	42	3	64
ASE_00222	RNaseP_arch links to Rfam database...	0.56	0.55	0.56	87	111947	68	8	59	1	70
ASE_00227	RNaseP_bact_a links to Rfam database...	0.25	0.23	0.27	31	78888	84	6	78	0	102
ASE_00228	RNaseP_bact_a links to Rfam database...	0.52	0.53	0.50	46	46879	46	14	32	0	40
ASE_00229	RNaseP_bact_a links to Rfam database...	0.61	0.61	0.62	53	42400	33	8	25	0	34
ASE_00231	RNaseP_bact_a links to Rfam database...	0.65	0.65	0.65	62	47800	33	5	28	0	34
ASE_00232	RNaseP_bact_a links to Rfam database...	0.63	0.64	0.61	54	38415	37	10	24	3	30
ASE_00234	RNaseP_bact_a links to Rfam database...	0.58	0.53	0.62	69	75355	47	3	39	5	60
ASE_00237	RNaseP_nuc links to Rfam database...	0.00	0.00	0.00	0	45676	92	25	52	15	56
ASE_00238	RNaseP_bact_a links to Rfam database...	0.59	0.59	0.60	67	64150	50	2	42	6	47
ASE_00240	RNaseP_bact_a links to Rfam database...	0.58	0.56	0.60	52	46578	44	4	31	9	41
ASE_00241	RNaseP_bact_a links to Rfam database...	0.49	0.49	0.49	43	43868	47	7	38	2	44
ASE_00246	RNaseP_nuc links to Rfam database...	0.30	0.33	0.27	22	48123	71	17	43	11	45
ASE_00247	RNaseP_nuc links to Rfam database...	0.18	0.19	0.17	12	54213	88	15	45	28	52
ASE_00252	RNaseP_bact_a links to Rfam database...	0.54	0.52	0.56	88	115284	71	5	63	3	80
ASE_00254	RNaseP_bact_a links to Rfam database...	0.49	0.46	0.52	38	36783	39	4	31	4	44
ASE_00255	RNaseP_bact_a links to Rfam database...	0.64	0.62	0.66	80	74570	45	7	34	4	50
ASE_00257	RNaseP_bact_a links to Rfam database...	0.55	0.55	0.55	53	50944	47	4	39	4	44
ASE_00263	RNaseP_bact_a links to Rfam database...	0.62	0.63	0.62	76	70377	49	5	42	2	44
ASE_00264	RNaseP_nuc links to Rfam database...	0.84	0.79	0.90	79	49053	24	0	9	15	21
ASE_00267	RNaseP_bact_a links to Rfam database...	0.32	0.31	0.34	27	45070	62	5	48	9	61
ASE_00270	RNaseP_bact_a links to Rfam database...	0.76	0.73	0.80	94	72272	29	4	20	5	34
ASE_00274	RNaseP_bact_a links to Rfam database...	0.45	0.44	0.46	45	55513	54	10	43	1	58
ASE_00277	RNaseP_bact_a links to Rfam database...	0.38	0.38	0.38	35	48112	61	9	49	3	56
ASE_00279	RNaseP_bact_a links to Rfam database...	0.68	0.66	0.71	67	53206	35	3	25	7	34
ASE_00280	RNaseP_bact_a links to Rfam database...	0.36	0.36	0.37	35	51909	65	4	55	6	63
ASE_00282	RNaseP_bact_a links to Rfam database...	0.56	0.55	0.57	70	77693	58	5	47	6	57
ASE_00283	RNaseP_bact_a links to Rfam database...	0.75	0.73	0.77	78	61675	30	3	20	7	29
ASE_00284	RNaseP_bact_a links to Rfam database...	0.62	0.60	0.64	65	58210	44	4	32	8	43
ASE_00285	RNaseP_bact_a links to Rfam database...	0.75	0.70	0.80	86	68899	28	3	18	7	36
ASE_00286	RNaseP_bact_a links to Rfam database...	0.43	0.42	0.43	39	46574	63	5	47	11	53
ASE_00287	RNaseP_bact_a links to Rfam database...	0.59	0.55	0.63	57	54856	39	2	31	6	46
ASE_00288	RNaseP_bact_a links to Rfam database...	0.47	0.45	0.48	42	45969	48	6	39	3	51
ASE_00289	RNaseP_bact_a links to Rfam database...	0.66	0.62	0.70	97	100886	45	4	38	3	60
ASE_00291	-	0.38	0.36	0.40	34	48430	53	9	43	1	60
ASE_00292	RNaseP_bact_a links to Rfam database...	0.62	0.58	0.66	80	81689	43	2	39	2	58
ASE_00294	RNaseP_bact_a links to Rfam database...	0.74	0.68	0.80	117	114335	32	2	27	3	54
ASE_00295	RNaseP_bact_a links to Rfam database...	0.63	0.60	0.66	79	73801	42	8	32	2	52
ASE_00296	RNaseP_bact_a links to Rfam database...	0.25	0.24	0.27	35	91676	98	8	87	3	110
ASE_00297	RNaseP_bact_a links to Rfam database...	0.50	0.50	0.51	49	52878	53	4	44	5	49
ASE_00298	RNaseP_bact_a links to Rfam database...	0.28	0.27	0.29	31	67420	79	9	68	2	82
ASE_00299	RNaseP_bact_a links to Rfam database...	0.49	0.48	0.51	48	49361	54	5	41	8	52
ASE_00313	RNaseP_nuc links to Rfam database...	0.72	0.71	0.74	63	62396	45	4	18	23	26
ASE_00328	RNaseP_bact_b links to Rfam database...	0.40	0.41	0.40	46	72656	75	3	66	6	66
ASE_00330	RNaseP_nuc links to Rfam database...	0.72	0.71	0.74	64	56193	44	3	20	21	26
ASE_00332	RNaseP_bact_a links to Rfam database...	0.56	0.54	0.59	75	81682	55	2	51	2	63
ASE_00337	RNaseP_nuc links to Rfam database...	0.52	0.54	0.51	38	39265	50	6	31	13	33
ASE_00338	RNaseP_nuc links to Rfam database...	0.67	0.63	0.72	62	66344	41	4	20	17	36
ASE_00340	RNaseP_bact_a links to Rfam database...	0.76	0.73	0.78	62	45977	26	6	11	9	23
ASE_00342	RNaseP_bact_a links to Rfam database...	0.57	0.54	0.60	62	62378	41	5	36	0	53
ASE_00343	RNaseP_bact_a links to Rfam database...	0.34	0.35	0.34	39	83321	88	9	67	12	74
ASE_00346	RNaseP_arch links to Rfam database...	0.31	0.30	0.32	29	48114	65	7	55	3	68
ASE_00359	RNaseP_arch links to Rfam database...	0.49	0.49	0.49	39	42698	49	3	38	8	41
ASE_00361	RNaseP_bact_a links to Rfam database...	0.51	0.49	0.53	62	75349	59	7	48	4	65
ASE_00362	RNaseP_bact_a links to Rfam database...	0.61	0.60	0.61	55	48115	39	6	29	4	36
ASE_00363	RNaseP_bact_a links to Rfam database...	0.53	0.54	0.53	51	51263	47	5	41	1	43
ASE_00364	RNaseP_bact_a links to Rfam database...	0.42	0.42	0.43	44	54182	63	4	55	4	61
ASE_00366	RNaseP_bact_a links to Rfam database...	0.54	0.56	0.53	55	58549	52	10	39	3	43
ASE_00367	RNaseP_bact_a links to Rfam database...	0.28	0.29	0.27	25	42979	68	8	59	1	61
ASE_00369	RNaseP_bact_a links to Rfam database...	0.56	0.55	0.58	59	55843	44	4	39	1	48
ASE_00370	RNaseP_bact_a links to Rfam database...	0.63	0.63	0.62	53	41820	33	7	25	1	31
ASE_00372	RNaseP_bact_a links to Rfam database...	0.63	0.62	0.65	62	51907	39	6	28	5	38
ASE_00374	RNaseP_bact_a links to Rfam database...	0.53	0.52	0.54	46	44765	40	8	31	1	42
ASE_00375	RNaseP_bact_a links to Rfam database...	0.70	0.66	0.74	73	60280	31	1	24	6	37
ASE_00376	RNaseP_bact_a links to Rfam database...	0.48	0.46	0.50	48	56857	52	4	44	4	57
ASE_00379	RNaseP_bact_a links to Rfam database...	0.57	0.55	0.60	49	45974	41	3	30	8	40
ASE_00380	RNaseP_bact_a links to Rfam database...	0.57	0.55	0.59	54	54854	41	2	36	3	45
ASE_00382	RNaseP_bact_a links to Rfam database...	0.49	0.49	0.50	41	41823	45	6	35	4	43
ASE_00383	RNaseP_bact_a links to Rfam database...	0.58	0.55	0.62	58	54521	40	3	33	4	47
ASE_00384	RNaseP_bact_a links to Rfam database...	0.41	0.39	0.43	36	48432	58	2	46	10	56
ASE_00385	RNaseP_bact_a links to Rfam database...	0.42	0.43	0.41	35	41819	53	6	45	2	46
ASE_00386	RNaseP_bact_a links to Rfam database...	0.65	0.65	0.65	62	50307	41	3	31	7	34
ASE_00387	RNaseP_bact_a links to Rfam database...	0.43	0.43	0.43	45	55841	59	6	53	0	59
ASE_00388	RNaseP_bact_a links to Rfam database...	0.43	0.42	0.44	37	45669	53	3	44	6	52
ASE_00390	RNaseP_bact_a links to Rfam database...	0.44	0.42	0.47	36	42118	52	6	35	11	49
ASE_00393	RNaseP_bact_a links to Rfam database...	0.37	0.35	0.39	33	47811	58	2	49	7	60
ASE_00394	RNaseP_bact_a links to Rfam database...	0.69	0.68	0.70	63	46881	29	5	22	2	30
ASE_00395	RNaseP_bact_a links to Rfam database...	0.65	0.63	0.68	53	41538	35	1	24	10	31
ASE_00396	RNaseP_bact_a links to Rfam database...	0.16	0.16	0.16	13	41535	71	2	66	3	70
ASE_00397	RNaseP_bact_a links to Rfam database...	0.54	0.54	0.54	57	54510	51	4	44	3	48
ASE_00398	RNaseP_bact_a links to Rfam database...	0.61	0.58	0.65	60	55852	37	1	32	4	44
ASE_00400	RNaseP_bact_a links to Rfam database...	0.53	0.53	0.54	56	57866	51	7	41	3	50
ASE_00401	RNaseP_bact_a links to Rfam database...	0.52	0.53	0.51	67	76897	65	13	51	1	59
ASE_00402	RNaseP_bact_a links to Rfam database...	0.41	0.40	0.43	34	42406	52	7	39	6	51
ASE_00403	RNaseP_bact_a links to Rfam database...	0.44	0.42	0.47	45	55849	55	4	47	4	62
ASE_00404	RNaseP_bact_a links to Rfam database...	0.55	0.54	0.57	46	42990	43	0	35	8	39
ASE_00408	-	0.48	0.48	0.49	34	32316	41	2	33	6	37
ASE_00411	RNaseP_bact_a links to Rfam database...	0.35	0.35	0.35	31	49366	63	7	51	5	58
ASE_00413	RNaseP_bact_a links to Rfam database...	0.55	0.58	0.52	47	44461	44	13	30	1	34
ASE_00415	RNaseP_bact_a links to Rfam database...	0.51	0.51	0.51	53	54843	53	7	43	3	50
ASE_00416	RNaseP_bact_a links to Rfam database...	0.65	0.61	0.68	78	77307	43	0	36	7	49
ASE_00417	RNaseP_arch links to Rfam database...	0.36	0.37	0.35	37	54508	73	10	60	3	63
ASE_00418	RNaseP_arch links to Rfam database...	0.20	0.21	0.20	16	38701	67	12	52	3	59
ASE_00419	RNaseP_bact_a links to Rfam database...	0.75	0.73	0.78	75	54850	26	5	16	5	28
ASE_00422	RNaseP_bact_a links to Rfam database...	0.44	0.44	0.45	41	46880	56	5	45	6	53
ASE_00426	RNaseP_bact_a links to Rfam database...	0.28	0.28	0.28	30	60967	78	7	71	0	78
ASE_00428	RNaseP_bact_a links to Rfam database...	0.51	0.50	0.53	62	76520	58	5	49	4	63
ASE_00429	-	0.43	0.44	0.43	29	28136	40	8	30	2	37
ASE_00430	RNaseP_bact_a links to Rfam database...	0.64	0.63	0.66	61	46878	39	5	27	7	36
ASE_00431	RNaseP_bact_a links to Rfam database...	0.53	0.49	0.56	47	46276	41	6	31	4	48
ASE_00434	RNaseP_bact_b links to Rfam database...	0.61	0.60	0.62	66	68159	48	7	33	8	44
ASE_00437	RNaseP_bact_a links to Rfam database...	0.42	0.39	0.46	53	79285	64	4	59	1	82
ASE_00438	RNaseP_bact_a links to Rfam database...	0.46	0.43	0.50	50	65965	52	3	48	1	66
ASE_00441	RNaseP_bact_a links to Rfam database...	0.77	0.72	0.83	81	64163	30	1	16	13	31
ASE_00447	RNaseP_bact_a links to Rfam database...	0.47	0.45	0.50	52	60274	55	1	51	3	64
ASE_00448	RNaseP_bact_a links to Rfam database...	0.22	0.22	0.23	25	64150	91	6	80	5	87
ASE_00451	RNaseP_bact_a links to Rfam database...	0.61	0.57	0.66	71	70768	40	2	35	3	54
CRW_00001	-	0.48	0.47	0.49	99	3173737	672	15	89	568	110
CRW_00002	-	0.55	0.55	0.55	145	408798	132	32	85	15	119
CRW_00004	-	0.45	0.46	0.45	60	154156	110	10	64	36	71
CRW_00005	-	0.55	0.55	0.55	73	137943	86	13	46	27	59
CRW_00007	-	0.33	0.36	0.30	48	144832	112	35	76	1	85
CRW_00009	-	0.58	0.59	0.57	81	137934	83	9	51	23	57
CRW_00010	-	0.78	0.78	0.79	98	102707	45	6	20	19	28
CRW_00011	-	0.68	0.70	0.66	97	118194	63	7	43	13	41
CRW_00013	Intron_gpI links to Rfam database...	0.22	0.22	0.22	25	103625	113	13	77	23	90
CRW_00014	-	0.49	0.48	0.50	59	103621	74	10	50	14	64
CRW_00016	Intron_gpI links to Rfam database...	0.65	0.62	0.69	74	77313	47	5	29	13	46
CRW_00017	-	0.38	0.42	0.34	38	92124	95	19	54	22	53
CRW_00019	-	0.74	0.77	0.71	105	127617	51	15	28	8	32
CRW_00024	SSU_rRNA_archaea links to Rfam database...	0.78	0.77	0.79	351	1085158	132	17	75	40	107
CRW_00048	SSU_rRNA_bacteria links to Rfam database...	0.49	0.49	0.50	228	1170758	252	20	209	23	242
CRW_00054	SSU_rRNA_bacteria links to Rfam database...	0.46	0.46	0.46	208	1107368	260	31	209	20	248
CRW_00059	SSU_rRNA_bacteria links to Rfam database...	0.52	0.51	0.53	240	1172289	233	26	191	16	233
CRW_00061	SSU_rRNA_bacteria links to Rfam database...	0.55	0.54	0.55	259	1181483	231	27	184	20	217
CRW_00068	SSU_rRNA_bacteria links to Rfam database...	0.49	0.49	0.50	226	1108849	247	24	206	17	231
CRW_00096	SSU_rRNA_bacteria links to Rfam database...	0.46	0.46	0.47	214	1178420	264	32	214	18	251
CRW_00140	SSU_rRNA_bacteria links to Rfam database...	0.64	0.63	0.64	291	1135826	182	20	141	21	172
CRW_00141	SSU_rRNA_bacteria links to Rfam database...	0.59	0.58	0.60	274	1201566	212	26	159	27	202
CRW_00150	SSU_rRNA_bacteria links to Rfam database...	0.42	0.41	0.42	193	1152465	282	35	228	19	273
CRW_00152	SSU_rRNA_bacteria links to Rfam database...	0.64	0.62	0.65	293	1179965	180	30	128	22	178
CRW_00166	SSU_rRNA_bacteria links to Rfam database...	0.54	0.53	0.55	248	1190745	226	28	175	23	220
CRW_00173	SSU_rRNA_bacteria links to Rfam database...	0.29	0.29	0.29	127	1082216	323	37	276	10	318
CRW_00177	SSU_rRNA_bacteria links to Rfam database...	0.44	0.43	0.45	203	1178433	259	22	222	15	270
CRW_00196	SSU_rRNA_bacteria links to Rfam database...	0.47	0.46	0.48	220	1207772	267	24	219	24	255
CRW_00230	SSU_rRNA_bacteria links to Rfam database...	0.57	0.56	0.58	266	1198467	216	21	172	23	212
CRW_00245	SSU_rRNA_bacteria links to Rfam database...	0.38	0.38	0.38	172	1105880	289	44	232	13	281
CRW_00248	SSU_rRNA_bacteria links to Rfam database...	0.57	0.57	0.58	274	1218666	234	21	180	33	210
CRW_00250	SSU_rRNA_bacteria links to Rfam database...	0.44	0.44	0.45	210	1198459	274	34	223	17	268
CRW_00256	SSU_rRNA_bacteria links to Rfam database...	0.41	0.40	0.42	188	1192291	278	39	222	17	280
CRW_00270	SSU_rRNA_bacteria links to Rfam database...	0.44	0.43	0.45	196	1111850	260	40	200	20	259
CRW_00271	SSU_rRNA_bacteria links to Rfam database...	0.51	0.50	0.51	231	1122302	237	43	175	19	231
CRW_00273	SSU_rRNA_bacteria links to Rfam database...	0.59	0.58	0.60	258	1085174	195	26	143	26	188
CRW_00275	SSU_rRNA_bacteria links to Rfam database...	0.47	0.47	0.48	213	1114826	258	28	204	26	244
CRW_00277	SSU_rRNA_bacteria links to Rfam database...	0.38	0.38	0.38	172	1110338	300	45	240	15	281
CRW_00278	SSU_rRNA_bacteria links to Rfam database...	0.41	0.40	0.42	180	1129825	274	33	218	23	270
CRW_00279	SSU_rRNA_bacteria links to Rfam database...	0.51	0.49	0.53	229	1179985	227	29	173	25	235
CRW_00280	SSU_rRNA_bacteria links to Rfam database...	0.51	0.50	0.51	227	1117817	231	28	188	15	226
CRW_00281	SSU_rRNA_bacteria links to Rfam database...	0.30	0.30	0.29	138	1144872	347	41	290	16	326
CRW_00283	SSU_rRNA_bacteria links to Rfam database...	0.28	0.27	0.29	118	1015612	321	39	256	26	314
CRW_00284	SSU_rRNA_bacteria links to Rfam database...	0.28	0.27	0.28	124	1131316	337	30	290	17	332
CRW_00285	SSU_rRNA_bacteria links to Rfam database...	0.72	0.71	0.74	325	1117819	142	23	93	26	133
CRW_00289	SSU_rRNA_bacteria links to Rfam database...	0.46	0.45	0.48	214	1189204	258	34	201	23	262
CRW_00292	SSU_rRNA_bacteria links to Rfam database...	0.31	0.30	0.32	138	1123814	315	46	252	17	323
CRW_00294	-	0.26	0.28	0.25	163	2620247	578	92	403	83	423
CRW_00298	SSU_rRNA_eukarya links to Rfam database...	0.19	0.20	0.18	99	1620353	490	81	367	42	395
CRW_00301	SSU_rRNA_eukarya links to Rfam database...	0.30	0.31	0.30	162	1761957	428	86	298	44	357
CRW_00310	SSU_rRNA_eukarya links to Rfam database...	0.29	0.30	0.28	157	1805386	453	81	326	46	364
CRW_00326	SSU_rRNA_eukarya links to Rfam database...	0.41	0.41	0.42	204	1627621	339	47	238	54	298
CRW_00330	SSU_rRNA_eukarya links to Rfam database...	0.32	0.32	0.31	167	1988474	452	69	305	78	350
CRW_00332	SSU_rRNA_eukarya links to Rfam database...	0.18	0.20	0.17	94	1769479	492	105	343	44	383
CRW_00333	SSU_rRNA_eukarya links to Rfam database...	0.29	0.30	0.28	153	1891946	449	74	312	63	361
CRW_00338	-	0.13	0.14	0.12	57	1052947	427	76	346	5	338
CRW_00345	SSU_rRNA_eukarya links to Rfam database...	0.34	0.35	0.33	175	1586340	403	71	285	47	323
CRW_00348	SSU_rRNA_eukarya links to Rfam database...	0.25	0.25	0.24	127	1614982	437	68	326	43	376
CRW_00358	SSU_rRNA_eukarya links to Rfam database...	0.36	0.36	0.35	183	1674845	391	61	276	54	324
CRW_00366	SSU_rRNA_eukarya links to Rfam database...	0.35	0.36	0.33	174	1579230	395	88	261	46	308
CRW_00370	SSU_rRNA_eukarya links to Rfam database...	0.28	0.28	0.28	143	1640248	420	77	298	45	363
CRW_00371	SSU_rRNA_eukarya links to Rfam database...	0.29	0.29	0.28	145	1611389	409	77	299	33	351
CRW_00372	SSU_rRNA_eukarya links to Rfam database...	0.36	0.36	0.35	181	1625787	378	59	279	40	317
CRW_00374	-	0.44	0.45	0.43	246	2182438	413	58	263	92	304
CRW_00375	-	0.27	0.29	0.26	155	2298851	514	78	356	80	386
CRW_00379	SSU_rRNA_eukarya links to Rfam database...	0.42	0.43	0.41	227	2126401	423	55	270	98	307
CRW_00381	-	0.32	0.33	0.31	184	2303138	513	67	342	104	373
CRW_00386	SSU_rRNA_eukarya links to Rfam database...	0.24	0.25	0.23	129	1750683	478	83	361	34	386
CRW_00400	-	0.24	0.25	0.23	125	2677905	618	72	353	193	369
CRW_00403	SSU_rRNA_eukarya links to Rfam database...	0.31	0.31	0.30	146	1606035	431	65	282	84	318
CRW_00411	SSU_rRNA_eukarya links to Rfam database...	0.34	0.34	0.34	169	1615006	381	62	266	53	327
CRW_00414	SSU_rRNA_eukarya links to Rfam database...	0.27	0.28	0.26	140	1665694	436	77	314	45	355
CRW_00417	-	0.38	0.37	0.39	97	458157	161	21	128	12	165
CRW_00418	-	0.24	0.22	0.26	56	441113	170	17	144	9	204
CRW_00419	-	0.19	0.17	0.20	45	463945	187	22	154	11	220
CRW_00421	-	0.38	0.36	0.41	96	462968	155	22	117	16	170
CRW_00422	-	0.36	0.35	0.38	92	455291	171	23	129	19	171
CRW_00423	-	0.20	0.21	0.19	40	242347	179	28	141	10	149
CRW_00426	-	0.30	0.29	0.31	78	457195	183	24	149	10	187
CRW_00427	-	0.18	0.18	0.19	46	454337	212	30	168	14	215
CRW_00428	-	0.39	0.38	0.40	98	465847	162	29	121	12	162
CRW_00429	-	0.16	0.16	0.16	37	306704	200	45	150	5	196
CRW_00430	-	0.18	0.18	0.19	47	456245	207	30	168	9	219
CRW_00433	-	0.35	0.32	0.38	85	467807	142	19	117	6	178
CRW_00434	-	0.38	0.35	0.40	92	457218	146	18	118	10	171
CRW_00435	-	0.36	0.33	0.39	88	451501	148	14	122	12	177
CRW_00437	-	0.21	0.21	0.22	54	456242	197	25	169	3	206
CRW_00438	-	0.35	0.34	0.36	90	454332	170	19	140	11	178
CRW_00441	-	0.17	0.16	0.19	42	454357	187	31	151	5	220
CRW_00442	-	0.37	0.36	0.39	93	453388	156	25	122	9	168
CRW_00443	-	0.39	0.36	0.42	93	456266	153	18	113	22	167
CRW_00444	-	0.27	0.26	0.28	68	459119	181	24	150	7	195
CRW_00445	-	0.28	0.27	0.30	71	458168	175	24	140	11	194
CRW_00446	-	0.46	0.43	0.48	115	468758	135	14	109	12	150
CRW_00447	-	0.27	0.27	0.28	69	452428	194	23	156	15	191
CRW_00448	-	0.34	0.32	0.36	83	457215	169	23	125	21	178
CRW_00449	-	0.22	0.21	0.23	54	444861	185	20	161	4	206
CRW_00451	-	0.21	0.20	0.21	52	457204	204	25	165	14	212
CRW_00452	-	0.31	0.29	0.34	77	453399	174	20	132	22	185
CRW_00453	-	0.34	0.31	0.36	81	452454	150	22	119	9	180
CRW_00458	-	0.32	0.31	0.32	83	464873	185	34	140	11	181
CRW_00459	-	0.29	0.27	0.31	72	462011	176	27	131	18	191
CRW_00460	-	0.27	0.27	0.27	149	1972543	463	72	327	64	395
CRW_00462	-	0.28	0.27	0.30	70	458171	178	16	146	16	191
CRW_00463	-	0.34	0.33	0.35	85	445799	164	22	134	8	169
CRW_00464	-	0.39	0.36	0.42	95	462015	142	15	116	11	169
CRW_00466	SSU_rRNA_bacteria links to Rfam database...	0.60	0.59	0.62	268	1116330	196	21	146	29	190
CRW_00474	-	0.51	0.51	0.50	429	3976751	463	78	352	33	407
CRW_00476	-	0.39	0.40	0.39	349	4278379	577	75	472	30	530
CRW_00487	-	0.55	0.54	0.56	468	4223035	405	51	317	37	404
CRW_00488	-	0.41	0.41	0.41	359	4325336	540	80	436	24	527
CRW_00490	-	0.36	0.36	0.36	312	4144884	592	83	481	28	550
CRW_00496	-	0.42	0.41	0.43	355	4194028	507	59	414	34	511
CRW_00499	-	0.43	0.42	0.43	370	4372547	511	63	423	25	513
CRW_00503	-	0.35	0.35	0.35	300	4252128	583	76	482	25	567
CRW_00507	-	0.30	0.30	0.30	257	4173750	615	69	529	17	608
CRW_00509	-	0.47	0.46	0.48	403	4182433	475	78	364	33	464
CRW_00511	-	0.34	0.34	0.35	290	4107580	558	57	484	17	566
CRW_00512	-	0.50	0.49	0.50	403	3814904	427	60	336	31	416
CRW_00518	-	0.26	0.25	0.26	224	4357757	657	75	572	10	660
CRW_00521	-	0.36	0.36	0.36	305	4136289	554	83	449	22	539
CRW_00525	-	0.27	0.29	0.26	238	4058899	721	99	589	33	575
CRW_00530	-	0.35	0.37	0.33	99	534792	223	55	149	19	169
CRW_00535	-	0.25	0.27	0.24	89	898092	316	73	216	27	239
CRW_00538	-	0.20	0.22	0.19	65	811827	304	77	206	21	235
CRW_00547	-	0.47	0.47	0.47	406	4278413	487	64	392	31	457
CRW_00589	SSU_rRNA_bacteria links to Rfam database...	0.18	0.18	0.18	78	1094024	374	34	324	16	367
CRW_00590	SSU_rRNA_bacteria links to Rfam database...	0.36	0.36	0.37	161	1119326	290	30	239	21	291
CRW_00591	SSU_rRNA_bacteria links to Rfam database...	0.57	0.56	0.59	251	1098476	205	23	153	29	195
CRW_00594	-	0.22	0.24	0.20	93	1028441	382	52	309	21	302
CRW_00596	-	0.21	0.22	0.21	86	1024181	349	55	274	20	300
CRW_00598	SSU_rRNA_eukarya links to Rfam database...	0.31	0.33	0.29	162	1665675	440	88	300	52	329
CRW_00599	-	0.33	0.34	0.32	187	3754579	730	79	325	326	359
CRW_00604	-	0.52	0.57	0.48	46	411682	214	15	35	164	35
CRW_00605	-	0.54	0.54	0.54	38	183850	134	11	22	101	32
CRW_00606	-	0.66	0.64	0.68	59	559066	266	2	26	238	33
CRW_00607	-	0.55	0.53	0.56	41	536057	274	4	28	242	36
CRW_00608	-	0.77	0.76	0.79	60	35702	26	2	14	10	19
CRW_00610	Intron_gpI links to Rfam database...	0.42	0.42	0.43	34	36235	46	6	40	0	47
CRW_00612	-	0.63	0.61	0.66	57	270393	172	1	29	142	36
CRW_00613	Intron_gpI links to Rfam database...	0.46	0.42	0.51	33	34915	41	2	30	9	45
CRW_00614	Intron_gpI links to Rfam database...	0.07	0.09	0.06	5	121689	141	24	53	64	52
CRW_00617	-	0.66	0.64	0.68	41	426366	236	1	18	217	23
CRW_00619	Intron_gpI links to Rfam database...	0.38	0.42	0.34	31	164933	138	25	36	77	42
CRW_00620	Intron_gpI links to Rfam database...	0.16	0.21	0.12	13	150869	161	32	61	68	50
CRW_00621	Intron_gpI links to Rfam database...	0.10	0.10	0.10	7	153108	157	13	53	91	64
CRW_00623	Intron_gpI links to Rfam database...	0.30	0.29	0.32	24	129719	123	11	41	71	59
CRW_00626	-	0.61	0.64	0.57	67	100908	69	18	32	19	37
CRW_00629	-	0.55	0.55	0.55	67	91256	57	16	39	2	55
CRW_00633	Intron_gpI links to Rfam database...	0.45	0.44	0.47	47	63445	58	10	44	4	59
CRW_00635	-	0.47	0.45	0.48	62	109150	78	9	57	12	75
CRW_00637	-	0.30	0.30	0.31	48	133746	117	16	93	8	110
CRW_00641	-	0.65	0.66	0.65	50	39826	37	6	21	10	26
CRW_00642	-	0.48	0.52	0.44	34	47201	52	9	34	9	31
CRW_00643	-	0.42	0.45	0.39	55	123114	99	29	58	12	67
CRW_00645	-	0.79	0.84	0.75	56	35436	30	8	11	11	11
CRW_00646	-	0.87	0.84	0.90	54	34920	25	0	6	19	10
CRW_00648	-	0.61	0.64	0.59	94	137915	75	17	49	9	54
CRW_00649	-	0.73	0.74	0.72	92	204352	114	3	33	78	32
CRW_00650	-	0.46	0.46	0.46	65	112909	82	6	70	6	77
CRW_00652	-	0.65	0.67	0.63	87	132217	74	8	43	23	43
CRW_00654	-	0.70	0.68	0.72	84	78094	38	4	28	6	40
CRW_00655	-	0.70	0.69	0.71	86	89132	38	9	26	3	38
CRW_00659	-	0.37	0.41	0.33	25	32310	56	15	35	6	36
CRW_00661	-	0.20	0.22	0.19	11	24251	51	16	32	3	40
CRW_00662	-	0.31	0.31	0.32	20	28618	48	2	40	6	45
CRW_00663	-	0.14	0.15	0.13	9	26039	61	6	52	3	52
CRW_00664	-	0.05	0.05	0.04	4	53536	92	20	68	4	74
CRW_00665	-	0.17	0.19	0.16	9	23596	56	11	37	8	39
CRW_00666	-	0.51	0.52	0.50	65	96011	78	11	54	13	61
CRW_00668	-	0.35	0.37	0.34	56	163711	127	20	91	16	94
CRW_00669	-	0.51	0.50	0.52	59	97348	65	15	39	11	60
CRW_00670	Intron_gpI links to Rfam database...	0.77	0.74	0.81	89	70015	26	0	21	5	31
CRW_00671	Intron_gpI links to Rfam database...	0.66	0.64	0.68	75	62725	41	8	27	6	42
CRW_00672	Intron_gpI links to Rfam database...	0.74	0.73	0.74	81	72281	36	10	18	8	30
CRW_00674	Intron_gpI links to Rfam database...	0.55	0.55	0.55	68	83312	61	8	48	5	56
CRW_00676	Intron_gpI links to Rfam database...	0.54	0.56	0.52	64	93406	75	17	41	17	51
CRW_00677	-	0.53	0.53	0.52	56	71902	60	13	39	8	49
CRW_00678	-	0.66	0.64	0.67	78	666318	274	10	29	235	43
CRW_00679	-	0.22	0.22	0.22	24	76525	94	14	73	7	83
CRW_00681	-	0.46	0.50	0.42	56	112918	93	19	57	17	56
CRW_00684	-	0.34	0.39	0.29	53	611990	298	44	84	170	82
CRW_00685	-	0.38	0.42	0.34	44	156952	121	20	64	37	62
CRW_00687	-	0.68	0.74	0.63	49	28602	34	8	21	5	17
CRW_00689	-	0.70	0.71	0.68	55	33589	29	11	15	3	22
CRW_00690	-	0.65	0.65	0.65	45	33342	32	6	18	8	24
CRW_00691	-	0.53	0.57	0.50	38	27185	41	4	34	3	29
CRW_00692	Intron_gpI links to Rfam database...	0.57	0.57	0.57	51	68545	54	15	24	15	39
CRW_00693	-	0.58	0.57	0.58	70	89133	61	7	43	11	52
CRW_00694	-	0.63	0.63	0.63	77	85782	53	6	40	7	45
CRW_00699	-	0.65	0.61	0.69	77	91694	39	3	32	4	49
CRW_00700	-	0.70	0.70	0.70	103	180753	77	11	34	32	44
CRW_00704	-	0.81	0.80	0.82	75	386669	198	4	12	182	19
CRW_00706	-	0.45	0.51	0.39	30	695534	340	11	35	294	29
CRW_00708	-	0.24	0.39	0.15	26	3456960	728	99	50	579	40
CRW_00709	-	0.07	0.07	0.07	6	1728778	562	20	66	476	79
CRW_00710	-	0.66	0.65	0.67	74	1040293	375	8	28	339	40
CRW_00711	-	0.13	0.14	0.12	17	2318640	641	36	88	517	107
CRW_00712	-	0.47	0.54	0.41	58	952747	370	30	55	285	50
CRW_00713	-	0.56	0.57	0.55	58	731339	313	11	37	265	43
CRW_00714	-	0.20	0.22	0.18	24	186222	163	28	81	54	83
CRW_00715	-	0.63	0.60	0.66	62	69284	36	8	24	4	42
CRW_00716	-	0.35	0.35	0.34	31	193663	149	10	49	90	58
CRW_00717	-	0.68	0.66	0.69	98	153593	64	7	37	20	50
CRW_00718	-	0.79	0.75	0.82	144	189860	51	3	29	19	47
CRW_00719	-	0.42	0.43	0.41	39	230086	160	13	43	104	52
CRW_00721	-	0.52	0.60	0.46	41	58563	65	19	30	16	27
CRW_00723	-	0.27	0.35	0.21	26	1583185	519	41	58	420	48
CRW_00758	SSU_rRNA_eukarya links to Rfam database...	0.29	0.30	0.29	144	1640268	416	66	288	62	339
CRW_00759	SSU_rRNA_eukarya links to Rfam database...	0.22	0.22	0.21	107	1636633	462	78	327	57	374
CRW_00760	SSU_rRNA_eukarya links to Rfam database...	0.28	0.29	0.28	140	1638458	411	74	283	54	346
CRW_00761	-	0.16	0.18	0.15	83	2863880	708	103	355	250	391
CRW_00763	SSU_rRNA_bacteria links to Rfam database...	0.38	0.37	0.40	165	1215603	304	24	228	52	281
CRW_00764	-	0.04	0.05	0.04	9	252909	203	35	163	5	187
CRW_00766	-	0.27	0.26	0.28	63	440168	177	20	140	17	177
CRW_00768	-	0.40	0.39	0.41	101	471658	164	22	125	17	158
CRW_00769	-	0.39	0.37	0.42	93	451502	148	20	110	18	159
CRW_00772	SSU_rRNA_bacteria links to Rfam database...	0.26	0.25	0.26	103	945610	313	37	250	26	301
CRW_00774	-	0.37	0.36	0.39	94	488322	170	17	133	20	169
CRW_00775	-	0.12	0.13	0.11	28	314576	220	60	157	3	184
CRW_00778	SSU_rRNA_bacteria links to Rfam database...	0.30	0.29	0.32	113	1201668	314	34	210	70	271
CRW_00779	-	0.30	0.30	0.30	126	1031350	307	35	255	17	296
CRW_00780	-	0.18	0.18	0.19	45	475569	201	21	165	15	210
CRW_00781	-	0.22	0.23	0.21	104	1978559	534	49	343	142	346
CRW_00783	-	0.37	0.36	0.38	93	453382	165	15	138	12	166
CRW_00784	-	0.37	0.35	0.39	93	456254	166	21	122	23	169
CRW_00785	-	0.35	0.33	0.36	84	452443	162	27	122	13	169
CRW_00787	-	0.23	0.24	0.23	74	646626	267	36	217	14	232
CRW_00788	-	0.23	0.24	0.22	85	1758363	476	50	252	174	276
CRW_00789	SSU_rRNA_bacteria links to Rfam database...	0.36	0.36	0.36	160	1137342	302	44	240	18	287
CRW_00790	-	0.18	0.19	0.18	85	1803571	519	41	353	125	362
CRW_00792	-	0.23	0.24	0.23	92	1581124	465	54	261	150	291
CRW_00793	-	0.33	0.34	0.33	127	1048686	318	55	208	55	250
CRW_00794	-	0.24	0.24	0.25	59	434543	196	15	161	20	187
CRW_00795	SSU_rRNA_bacteria links to Rfam database...	0.21	0.22	0.21	85	1152511	379	51	274	54	309
CRW_00796	-	0.20	0.20	0.21	47	384777	193	27	152	14	188
CRW_00797	-	0.26	0.26	0.26	90	692907	280	33	223	24	252
CRW_00800	SSU_rRNA_eukarya links to Rfam database...	0.55	0.53	0.57	251	1401532	269	24	168	77	219
CRW_00801	-	0.45	0.45	0.46	112	438270	149	29	105	15	137
CRW_00802	-	0.19	0.19	0.19	49	460062	218	33	176	9	204
CRW_00804	-	0.32	0.32	0.31	130	1420037	396	39	249	108	273
CRW_00807	-	0.41	0.40	0.41	161	1391552	340	38	195	107	237
CRW_00808	-	0.37	0.39	0.35	139	1301292	367	81	179	107	217
CRW_00815	-	0.71	0.72	0.72	113	159737	54	11	34	9	45
CRW_00816	-	0.36	0.36	0.35	47	143781	108	18	70	20	82
CRW_00820	-	0.57	0.58	0.56	84	136352	77	16	51	10	61
CRW_00849	SSU_rRNA_bacteria links to Rfam database...	0.49	0.48	0.49	227	1117798	259	23	212	24	243
CRW_01134	-	0.25	0.26	0.25	109	964912	341	41	293	7	318
CRW_01153	SSU_rRNA_eukarya links to Rfam database...	0.32	0.32	0.32	160	1606024	390	54	290	46	343
CRW_01168	-	0.39	0.39	0.39	160	900739	274	33	221	20	251
CRW_01171	SSU_rRNA_eukarya links to Rfam database...	0.32	0.33	0.31	167	1593473	402	81	284	37	339
CRW_01186	-	0.27	0.27	0.27	103	836190	293	44	234	15	283
CRW_01188	-	0.17	0.17	0.17	68	837466	339	48	283	8	325
CRW_01189	-	0.21	0.21	0.21	82	862242	334	47	270	17	310
CRW_01214	-	0.29	0.29	0.29	116	931900	288	36	243	9	289
CRW_01222	-	0.23	0.23	0.23	92	912871	321	54	259	8	305
CRW_01250	-	0.31	0.30	0.32	115	781518	257	33	209	15	263
CRW_01260	-	0.15	0.15	0.15	60	912885	340	48	283	9	333
CRW_01266	-	0.28	0.28	0.28	108	818174	292	43	235	14	273
CRW_01275	-	0.30	0.30	0.30	128	1082230	316	45	253	18	304
CRW_01283	-	0.40	0.40	0.40	163	963560	265	37	206	22	246
CRW_01300	SSU_rRNA_eukarya links to Rfam database...	0.36	0.37	0.35	189	1693186	392	71	274	47	326
CRW_01314	-	0.28	0.27	0.29	110	937386	284	37	232	15	297
CRW_01343	SSU_rRNA_archaea links to Rfam database...	0.37	0.37	0.37	160	977470	284	42	229	13	274
CRW_01344	-	0.30	0.30	0.30	110	791545	267	40	216	11	256
CRW_01456	-	0.33	0.33	0.32	282	4240460	604	73	513	18	569
PDB_00018	-	0.20	0.20	0.22	4	1017	14	2	12	0	16
PDB_00020	-	0.38	0.35	0.44	7	764	9	0	9	0	13
PDB_00056	-	-0.02	0.00	0.00	0	618	12	0	12	0	16
PDB_00072	-	0.35	0.35	0.35	73	148033	136	10	124	2	137
PDB_00078	-	0.47	0.45	0.50	52	49665	53	6	47	0	63
PDB_00079	-	0.65	0.62	0.69	88	121643	69	9	31	29	54
PDB_00123	-	-0.01	0.00	0.00	0	4150	36	0	36	0	36
PDB_00138	-	0.72	0.63	0.83	5	372	1	0	1	0	3
PDB_00209	-	-0.02	0.00	0.00	0	551	10	2	8	0	11
PDB_00243	-	0.67	0.58	0.78	7	621	3	0	2	1	5
PDB_00278	-	0.13	0.13	0.13	9	24907	60	6	54	0	63
PDB_00352	-	0.89	0.79	1.00	15	1210	0	0	0	0	4
PDB_00401	-	0.45	0.42	0.48	400	3996547	462	46	385	31	553
PDB_00403	-	0.49	0.50	0.48	76	124590	93	16	68	9	77
PDB_00423	-	0.07	0.07	0.07	5	26723	68	7	61	0	69
PDB_00447	-	0.41	0.36	0.47	16	7106	18	6	12	0	28
PDB_00571	tRNA links to Rfam database...	-0.01	0.00	0.00	0	3302	20	5	14	1	25
PDB_00675	-	0.44	0.41	0.47	399	4167977	482	45	407	30	575
PDB_00701	-	0.47	0.46	0.49	50	45348	54	5	48	1	59
PDB_00703	SSU_rRNA_bacteria links to Rfam database...	0.53	0.50	0.56	246	1073408	220	17	174	29	249
PDB_00704	-	0.47	0.44	0.51	431	4249217	451	57	365	29	542
PDB_00713	-	0.24	0.24	0.25	5	1996	15	0	15	0	16
PDB_00716	HDV_ribozyme links to Rfam database...	-0.01	0.00	0.00	0	2677	25	1	23	1	23
PDB_00747	-	0.68	0.61	0.77	49	24467	15	0	15	0	31
PDB_00805	-	0.64	0.61	0.67	184	467752	116	18	74	24	118
PDB_00827	Intron_gpI links to Rfam database...	0.67	0.59	0.76	48	26965	16	0	15	1	33
PDB_00828	Purine links to Rfam database...	0.88	0.78	1.00	21	2464	0	0	0	0	6
PDB_00829	Purine links to Rfam database...	0.82	0.71	0.94	17	2260	1	0	1	0	7
PDB_00854	SSU_rRNA_bacteria links to Rfam database...	0.55	0.53	0.56	284	1500271	276	22	201	53	251
PDB_00874	-	-0.02	0.00	0.00	0	931	15	0	15	0	20
PDB_00886	-	-0.01	0.00	0.00	0	4148	38	0	38	0	40
PDB_00917	-	0.49	0.47	0.51	45	35157	49	4	39	6	50
PDB_00919	RNaseP_bact_a links to Rfam database...	0.50	0.47	0.53	48	44163	45	3	39	3	55
PDB_01009	tRNA links to Rfam database...	0.52	0.57	0.48	12	2460	13	5	8	0	9
PDB_01040	-	0.30	0.30	0.32	6	1109	13	0	13	0	14
PDB_01070	-	0.31	0.30	0.33	16	12671	33	2	31	0	38
PDB_01088	SSU_rRNA_bacteria links to Rfam database...	0.36	0.35	0.37	191	1470959	352	45	275	32	356
PDB_01092	glmS links to Rfam database...	0.69	0.60	0.79	31	10114	11	1	7	3	21
PDB_01103	SSU_rRNA_bacteria links to Rfam database...	0.56	0.54	0.58	306	1605999	254	32	191	31	256
PDB_01105	SSU_rRNA_bacteria links to Rfam database...	0.60	0.58	0.63	313	1433471	221	15	172	34	227
PDB_01120	SSU_rRNA_bacteria links to Rfam database...	0.46	0.43	0.49	228	1204659	250	31	210	9	299
PDB_01129	-	0.27	0.28	0.26	20	35433	64	15	43	6	51
PDB_01140	-	0.48	0.46	0.49	432	4176620	490	61	382	47	498
PDB_01157	-	0.26	0.24	0.27	24	49998	64	11	53	0	74
PDB_01166	-	0.42	0.41	0.44	86	181912	115	21	87	7	126
PDB_01260	-	-0.01	0.00	0.00	0	1809	21	0	21	0	25
PDB_01261	-	0.50	0.45	0.55	152	467752	128	4	120	4	184
PDB_01273	SSU_rRNA_bacteria links to Rfam database...	0.51	0.48	0.53	237	1117812	242	21	190	31	254
PDB_01281	-	-0.03	0.00	0.00	0	366	12	0	12	0	14
PDB_01299	-	-0.01	0.00	0.00	0	893	10	2	8	0	15
PDB_01309	-	-0.01	0.00	0.00	0	9118	62	9	53	0	39
RFA_00597	Telomerase-vert links to Rfam database...	0.51	0.51	0.51	56	97794	82	5	48	29	53
RFA_00599	Telomerase-vert links to Rfam database...	0.67	0.70	0.64	78	101353	66	16	28	22	33
RFA_00601	Telomerase-vert links to Rfam database...	0.09	0.11	0.08	12	99092	139	35	96	8	102
RFA_00602	Telomerase-vert links to Rfam database...	0.50	0.53	0.47	62	101344	91	18	51	22	54
RFA_00632	HDV_ribozyme links to Rfam database...	0.40	0.39	0.41	11	4068	18	0	16	2	17
RFA_00636	HDV_ribozyme links to Rfam database...	0.42	0.43	0.43	12	3977	17	2	14	1	16
RFA_00767	Corona_pk3 links to Rfam database...	0.63	0.56	0.71	10	1877	5	0	4	1	8
RFA_00768	Corona_pk3 links to Rfam database...	0.48	0.44	0.53	8	1876	8	1	6	1	10
RFA_00769	Corona_pk3 links to Rfam database...	0.55	0.56	0.56	10	1935	10	3	5	2	8
RFA_00770	Corona_pk3 links to Rfam database...	0.68	0.56	0.83	10	2004	6	0	2	4	8
RFA_00773	Corona_pk3 links to Rfam database...	0.71	0.56	0.91	10	1942	5	1	0	4	8
RFA_00808	RydC links to Rfam database...	-0.01	0.00	0.00	0	2001	16	2	13	1	16
RFA_00809	RydC links to Rfam database...	0.36	0.38	0.35	6	2128	12	1	10	1	10
TMR_00038	tmRNA links to Rfam database...	0.25	0.25	0.25	28	71140	89	12	73	4	82
TMR_00046	tmRNA links to Rfam database...	0.47	0.48	0.46	46	62734	61	10	45	6	50
TMR_00047	tmRNA links to Rfam database...	0.25	0.30	0.22	17	48438	76	16	45	15	40
TMR_00048	tmRNA links to Rfam database...	0.35	0.37	0.34	35	64876	73	9	60	4	60
TMR_00049	tmRNA links to Rfam database...	0.50	0.52	0.49	45	63098	59	9	38	12	42
TMR_00051	tmRNA links to Rfam database...	0.54	0.51	0.57	48	65619	56	2	34	20	46
TMR_00055	tmRNA links to Rfam database...	0.06	0.07	0.06	8	78870	125	25	100	0	106
TMR_00064	tmRNA links to Rfam database...	0.38	0.38	0.38	39	76925	72	19	45	8	64
TMR_00073	tmRNA links to Rfam database...	0.40	0.39	0.40	46	65588	70	7	62	1	71
TMR_00076	tmRNA links to Rfam database...	0.26	0.27	0.25	27	70768	87	15	66	6	73
TMR_00106	tmRNA links to Rfam database...	0.35	0.37	0.34	44	89969	91	20	67	4	76
TMR_00144	tmRNA links to Rfam database...	0.20	0.21	0.19	22	74189	96	15	79	2	81
TMR_00150	tmRNA links to Rfam database...	0.64	0.64	0.64	27	43029	50	2	13	35	15
TMR_00179	tmRNA links to Rfam database...	0.31	0.33	0.29	32	67050	85	14	65	6	66
TMR_00199	tmRNA links to Rfam database...	0.48	0.49	0.47	45	62740	57	21	29	7	47
TMR_00223	tmRNA links to Rfam database...	0.19	0.20	0.18	19	64158	88	22	62	4	76
TMR_00238	tmRNA links to Rfam database...	0.14	0.15	0.13	15	84553	106	15	83	8	86
TMR_00239	tmRNA links to Rfam database...	0.47	0.48	0.46	46	61676	57	11	43	3	50
TMR_00246	-	0.49	0.56	0.43	19	78166	109	5	20	84	15
TMR_00274	tmRNA links to Rfam database...	0.31	0.32	0.31	34	66684	83	11	66	6	71
TMR_00279	tmRNA links to Rfam database...	0.50	0.51	0.49	48	68908	60	10	40	10	46
TMR_00283	tmRNA links to Rfam database...	0.39	0.42	0.37	40	65233	71	19	49	3	56
TMR_00310	tmRNA links to Rfam database...	0.56	0.56	0.56	55	63805	48	9	34	5	43
TMR_00317	tmRNA links to Rfam database...	0.56	0.57	0.55	58	68160	50	14	33	3	44
TMR_00352	tmRNA links to Rfam database...	0.42	0.45	0.39	34	95179	91	17	36	38	41
TMR_00409	tmRNA links to Rfam database...	0.65	0.70	0.60	32	68582	75	7	14	54	14
TMR_00411	tmRNA links to Rfam database...	0.18	0.18	0.17	16	60983	83	14	62	7	71
TMR_00415	tmRNA links to Rfam database...	0.26	0.26	0.25	26	67059	76	13	63	0	75
TMR_00419	tmRNA links to Rfam database...	0.39	0.39	0.40	43	81703	83	10	54	19	68
TMR_00422	tmRNA links to Rfam database...	0.46	0.49	0.44	45	67793	67	14	44	9	47
TMR_00458	tmRNA links to Rfam database...	0.22	0.22	0.23	20	63458	76	7	61	8	73
TMR_00478	tmRNA links to Rfam database...	0.12	0.13	0.12	13	71900	100	29	68	3	86
TMR_00553	tmRNA links to Rfam database...	0.39	0.38	0.39	31	48126	54	7	41	6	50
TMR_00560	tmRNA links to Rfam database...	0.41	0.42	0.41	41	60975	67	6	53	8	57
TMR_00568	tmRNA links to Rfam database...	0.57	0.57	0.58	56	60629	50	3	38	9	43
TMR_00579	tmRNA links to Rfam database...	0.22	0.26	0.20	23	80485	102	21	72	9	67
TMR_00581	tmRNA links to Rfam database...	0.14	0.14	0.13	14	62376	98	9	82	7	84
TMR_00587	tmRNA links to Rfam database...	0.69	0.68	0.71	68	61329	33	4	24	5	32
TMR_00588	tmRNA links to Rfam database...	0.24	0.25	0.23	25	77311	94	24	61	9	76
TMR_00594	tmRNA links to Rfam database...	0.20	0.20	0.20	21	79294	90	15	71	4	83
TMR_00596	tmRNA links to Rfam database...	0.14	0.15	0.14	14	78107	99	16	73	10	81
TMR_00600	tmRNA links to Rfam database...	0.14	0.14	0.14	16	79684	100	18	82	0	99
TMR_00603	tmRNA links to Rfam database...	0.54	0.56	0.52	24	60332	82	7	15	60	19
TMR_00606	tmRNA links to Rfam database...	0.37	0.36	0.37	39	68900	77	5	62	10	68
TMR_00625	tmRNA links to Rfam database...	0.20	0.21	0.19	22	78889	96	28	64	4	84
TMR_00706	tmRNA links to Rfam database...	0.50	0.50	0.50	51	66328	55	6	45	4	52
TMR_00712	tmRNA links to Rfam database...	0.18	0.18	0.18	20	78497	101	14	75	12	89

^top

Matthews Correlation Coeffient, Sensitivity and Positive Predictive Value have been calculated based on the paper by Gardener & Giegerich, 2004.

Table of contents:

Overview

Performance plots

Performance of Fold - scored higher in this pairwise comparison

1. Total counts & total scores for Fold

2. Individual counts for Fold [ download as .csv ]

Performance of Afold - scored lower in this pairwise comparison

1. Total counts & total scores for Afold

2. Individual counts for Afold [ download as .csv ]