CompaRNA - on-line benchmarks of RNA structure prediction methods

Laboratory of Structural Bioinformatics @ Adam Mickiewicz University in Poznan

Home

Methods

Datasets

Rankings

RNA 2D Atlas

Help

FAQ

Contact us

RSS feeds

Twitter

Overview

Metric	IPknot		CRWrnafold
MCC	0.556	>	0.395
Average MCC ± 95% Confidence Intervals	0.577 ± 0.012	>	0.408 ± 0.013
Sensitivity	0.486	>	0.398
Positive Predictive Value	0.637	>	0.394
Total TP	50317	>	41196
Total TN	135244687	>	135219201
Total FP	37102	<	73518
Total FP CONTRA	5214	<	10702
Total FP INCONS	23466	<	52585
Total FP COMP	8422	<	10231
Total FN	53297	<	62418
P-value	3.56938820447e-08

^top

Performance plots

Comparison of performance of IPknot and CRWrnafold. Positive Predictive Value (PPV) is plotted against sensitivity. Each dot represents a single test of each method. See tables below for raw data (individual counts for IPknot and CRWrnafold).
Average Matthews Correlation Coefficients (MCC) with 95% confidence intervals (CIs) were plotted for different RNA families, for which at least 3 members were present in the benchmarking dataset. 'n' denotes the number of MCCs used to calculate the average and CI. See tables below for raw data (individual counts for IPknot and CRWrnafold).
Comparison of average Matthews Correlation Coefficients (MCCs) for IPknot and CRWrnafold. The whiskers correspond to 95% confidence intervals (CIs). 'n' denotes the number of MCCs used to calculate average MCCs and CIs. See tables below for raw data (individual counts for IPknot and CRWrnafold).

^top

Performance of IPknot - scored higher in this pairwise comparison

1. Total counts & total scores for IPknot

Total Base Pair Counts
Total TP	50317
Total TN	135244687
Total FP	37102
Total FP CONTRA	5214
Total FP INCONS	23466
Total FP COMP	8422
Total FN	53297

Total Scores
MCC	0.556
Average MCC ± 95% Confidence Intervals	0.577 ± 0.012
Sensitivity	0.486
Positive Predictive Value	0.637
Nr of predictions	790

^top

2. Individual counts for IPknot [ download as .csv ]

RNA Chain	Rfam family	MCC	SENS	PPV	TP	TN	FP	FP CONTRA	FP INCONS	FP COMP	FN
ASE_00001	RNaseP_arch links to Rfam database...	0.76	0.73	0.80	55	34122	20	3	11	6	20
ASE_00002	RNaseP_arch links to Rfam database...	0.68	0.62	0.75	45	35451	20	2	13	5	28
ASE_00004	RNaseP_bact_a links to Rfam database...	0.75	0.66	0.85	64	47820	11	5	6	0	33
ASE_00005	RNaseP_bact_a links to Rfam database...	0.59	0.51	0.69	60	57883	30	0	27	3	57
ASE_00006	RNaseP_bact_a links to Rfam database...	0.60	0.52	0.70	48	47517	22	3	18	1	45
ASE_00007	RNaseP_bact_a links to Rfam database...	0.63	0.55	0.72	60	59602	27	0	23	4	50
ASE_00009	RNaseP_arch links to Rfam database...	0.71	0.67	0.75	45	26046	15	0	15	0	22
ASE_00012	RNaseP_bact_a links to Rfam database...	0.66	0.56	0.78	69	73832	22	5	14	3	54
ASE_00014	RNaseP_arch links to Rfam database...	0.56	0.50	0.63	53	54201	33	7	24	2	53
ASE_00017	RNaseP_nuc links to Rfam database...	0.28	0.31	0.26	20	50962	71	19	39	13	44
ASE_00018	RNaseP_bact_a links to Rfam database...	0.70	0.64	0.77	86	80489	27	0	26	1	48
ASE_00020	RNaseP_bact_a links to Rfam database...	0.67	0.58	0.77	73	73825	22	2	20	0	53
ASE_00021	RNaseP_bact_a links to Rfam database...	0.70	0.57	0.85	91	104089	21	3	13	5	69
ASE_00022	RNaseP_bact_b links to Rfam database...	0.69	0.52	0.93	64	82959	9	0	5	4	60
ASE_00023	RNaseP_bact_a links to Rfam database...	0.69	0.59	0.82	75	84163	20	0	17	3	52
ASE_00025	RNaseP_nuc links to Rfam database...	0.39	0.35	0.43	25	78548	82	5	28	49	46
ASE_00026	RNaseP_bact_a links to Rfam database...	0.56	0.50	0.63	55	59598	36	3	29	4	55
ASE_00028	RNaseP_bact_b links to Rfam database...	0.70	0.60	0.81	76	84572	24	3	15	6	50
ASE_00029	RNaseP_bact_a links to Rfam database...	0.68	0.57	0.81	70	82942	16	4	12	0	52
ASE_00030	RNaseP_bact_a links to Rfam database...	0.78	0.70	0.87	102	85374	15	3	12	0	43
ASE_00031	RNaseP_bact_a links to Rfam database...	0.62	0.54	0.71	68	86640	32	1	27	4	58
ASE_00032	RNaseP_bact_a links to Rfam database...	0.68	0.58	0.78	69	80112	22	0	19	3	49
ASE_00033	RNaseP_bact_a links to Rfam database...	0.71	0.57	0.88	69	64902	11	0	9	2	52
ASE_00035	RNaseP_bact_a links to Rfam database...	0.44	0.30	0.66	35	70447	21	4	14	3	83
ASE_00036	RNaseP_bact_a links to Rfam database...	0.58	0.52	0.66	68	75752	37	4	31	2	64
ASE_00037	RNaseP_bact_a links to Rfam database...	0.47	0.39	0.57	43	59265	34	0	32	2	67
ASE_00038	RNaseP_bact_a links to Rfam database...	0.59	0.53	0.66	54	53546	28	4	24	0	47
ASE_00040	RNaseP_bact_a links to Rfam database...	0.51	0.42	0.62	56	78913	38	0	34	4	77
ASE_00041	RNaseP_bact_a links to Rfam database...	0.69	0.50	0.96	54	57574	4	0	2	2	54
ASE_00042	RNaseP_bact_a links to Rfam database...	0.60	0.51	0.70	74	89994	33	1	31	1	71
ASE_00044	RNaseP_bact_a links to Rfam database...	0.70	0.70	0.72	73	54513	34	3	26	5	32
ASE_00046	RNaseP_bact_a links to Rfam database...	0.67	0.45	1.00	46	50357	1	0	0	1	57
ASE_00047	RNaseP_bact_a links to Rfam database...	0.69	0.52	0.93	67	74233	5	1	4	0	63
ASE_00052	RNaseP_bact_a links to Rfam database...	0.61	0.51	0.72	57	61346	26	0	22	4	55
ASE_00053	RNaseP_bact_a links to Rfam database...	0.67	0.62	0.74	82	79290	31	6	23	2	51
ASE_00056	-	0.49	0.40	0.60	29	30828	25	3	16	6	43
ASE_00057	RNaseP_bact_a links to Rfam database...	0.69	0.59	0.80	79	82116	23	3	17	3	55
ASE_00064	RNaseP_bact_a links to Rfam database...	0.68	0.60	0.77	53	45382	22	3	13	6	36
ASE_00066	RNaseP_bact_a links to Rfam database...	0.78	0.63	0.95	82	72304	4	0	4	0	48
ASE_00068	RNaseP_bact_a links to Rfam database...	0.75	0.60	0.94	51	37621	3	0	3	0	34
ASE_00069	RNaseP_bact_a links to Rfam database...	0.65	0.56	0.76	78	82926	26	4	20	2	62
ASE_00074	RNaseP_bact_a links to Rfam database...	0.49	0.45	0.54	53	67798	45	4	41	0	66
ASE_00075	RNaseP_bact_a links to Rfam database...	0.71	0.61	0.83	99	108691	25	2	19	4	63
ASE_00076	RNaseP_bact_a links to Rfam database...	0.60	0.53	0.68	63	68173	31	3	26	2	55
ASE_00077	RNaseP_bact_a links to Rfam database...	0.68	0.53	0.87	46	45097	12	2	5	5	40
ASE_00078	RNaseP_bact_a links to Rfam database...	0.70	0.57	0.87	47	43017	7	1	6	0	36
ASE_00079	RNaseP_bact_a links to Rfam database...	0.61	0.54	0.68	54	55532	25	2	23	0	46
ASE_00080	RNaseP_bact_a links to Rfam database...	0.41	0.36	0.47	44	71537	54	5	45	4	79
ASE_00081	RNaseP_bact_a links to Rfam database...	0.79	0.71	0.88	69	49692	10	1	8	1	28
ASE_00082	RNaseP_bact_a links to Rfam database...	0.83	0.74	0.93	86	70408	18	0	6	12	30
ASE_00083	RNaseP_bact_a links to Rfam database...	0.77	0.72	0.82	79	62385	22	0	17	5	31
ASE_00084	RNaseP_bact_a links to Rfam database...	0.83	0.74	0.94	73	53550	8	1	4	3	26
ASE_00087	RNaseP_bact_a links to Rfam database...	0.74	0.63	0.87	90	88306	14	2	12	0	54
ASE_00089	-	0.62	0.52	0.73	41	31319	15	2	13	0	38
ASE_00090	RNaseP_bact_a links to Rfam database...	0.66	0.58	0.75	59	55532	20	1	19	0	42
ASE_00092	RNaseP_bact_a links to Rfam database...	0.85	0.78	0.93	88	63451	9	1	6	2	25
ASE_00096	RNaseP_bact_a links to Rfam database...	0.59	0.52	0.67	60	63456	30	3	27	0	55
ASE_00099	RNaseP_bact_a links to Rfam database...	0.80	0.70	0.92	84	64529	7	0	7	0	36
ASE_00100	RNaseP_nuc links to Rfam database...	0.29	0.25	0.33	19	82158	85	2	36	47	57
ASE_00102	RNaseP_bact_a links to Rfam database...	0.72	0.65	0.81	108	117721	29	5	21	3	58
ASE_00104	RNaseP_bact_a links to Rfam database...	0.75	0.66	0.84	79	64167	15	2	13	0	40
ASE_00105	RNaseP_bact_a links to Rfam database...	0.48	0.41	0.56	46	64179	39	6	30	3	65
ASE_00107	RNaseP_bact_a links to Rfam database...	0.73	0.66	0.82	84	73050	19	1	18	0	43
ASE_00108	RNaseP_nuc links to Rfam database...	0.45	0.43	0.47	27	46913	62	5	26	31	36
ASE_00111	RNaseP_nuc links to Rfam database...	0.16	0.14	0.18	8	50041	46	12	25	9	49
ASE_00112	RNaseP_bact_a links to Rfam database...	0.80	0.67	0.95	78	75384	10	1	3	6	38
ASE_00115	RNaseP_bact_a links to Rfam database...	0.74	0.68	0.81	69	54530	23	4	12	7	32
ASE_00116	RNaseP_arch links to Rfam database...	0.32	0.24	0.42	16	31588	25	1	21	3	50
ASE_00118	RNaseP_bact_a links to Rfam database...	0.40	0.37	0.44	38	60639	50	3	46	1	64
ASE_00119	RNaseP_bact_a links to Rfam database...	0.85	0.81	0.91	87	62739	9	1	8	0	21
ASE_00120	RNaseP_arch links to Rfam database...	0.62	0.55	0.69	52	46896	23	7	16	0	42
ASE_00121	RNaseP_arch links to Rfam database...	0.43	0.37	0.51	34	45083	34	4	29	1	58
ASE_00122	RNaseP_bact_a links to Rfam database...	0.73	0.65	0.83	57	43296	12	0	12	0	31
ASE_00123	RNaseP_bact_a links to Rfam database...	0.52	0.49	0.55	42	38427	38	2	32	4	43
ASE_00125	RNaseP_bact_a links to Rfam database...	0.75	0.65	0.86	57	39274	11	0	9	2	31
ASE_00126	RNaseP_bact_a links to Rfam database...	0.65	0.59	0.72	48	40403	25	1	18	6	34
ASE_00128	RNaseP_bact_a links to Rfam database...	0.78	0.65	0.94	65	53232	7	0	4	3	35
ASE_00129	RNaseP_bact_a links to Rfam database...	0.70	0.67	0.74	74	62735	27	5	21	1	37
ASE_00131	RNaseP_bact_a links to Rfam database...	0.80	0.66	0.98	56	39283	5	0	1	4	29
ASE_00132	RNaseP_bact_a links to Rfam database...	0.63	0.48	0.82	46	50347	11	1	9	1	49
ASE_00134	RNaseP_bact_a links to Rfam database...	0.51	0.47	0.55	45	50321	37	4	33	0	50
ASE_00135	RNaseP_bact_a links to Rfam database...	0.67	0.58	0.79	63	63110	22	1	16	5	46
ASE_00136	RNaseP_bact_a links to Rfam database...	0.61	0.52	0.72	48	48138	28	1	18	9	44
ASE_00137	RNaseP_bact_a links to Rfam database...	0.75	0.68	0.82	67	48434	15	0	15	0	31
ASE_00138	RNaseP_bact_a links to Rfam database...	0.58	0.48	0.70	39	40414	17	1	16	0	42
ASE_00139	RNaseP_bact_a links to Rfam database...	0.73	0.63	0.84	66	54206	15	0	13	2	38
ASE_00140	RNaseP_bact_a links to Rfam database...	0.72	0.61	0.85	76	70787	14	3	10	1	49
ASE_00142	RNaseP_bact_a links to Rfam database...	0.73	0.65	0.81	79	67064	19	4	14	1	43
ASE_00145	RNaseP_arch links to Rfam database...	0.63	0.53	0.75	59	70046	24	5	15	4	52
ASE_00146	RNaseP_bact_a links to Rfam database...	0.55	0.43	0.72	53	70802	22	5	16	1	71
ASE_00148	RNaseP_arch links to Rfam database...	0.74	0.69	0.80	106	112443	26	3	23	0	48
ASE_00151	RNaseP_bact_a links to Rfam database...	0.52	0.49	0.55	48	51916	41	9	30	2	50
ASE_00153	RNaseP_nuc links to Rfam database...	0.52	0.51	0.54	37	57562	60	6	25	29	36
ASE_00154	RNaseP_arch links to Rfam database...	0.70	0.64	0.76	68	65252	24	2	19	3	39
ASE_00155	RNaseP_arch links to Rfam database...	0.58	0.52	0.64	74	93412	45	4	38	3	68
ASE_00163	RNaseP_bact_a links to Rfam database...	0.39	0.35	0.43	33	53224	53	4	40	9	60
ASE_00165	RNaseP_bact_a links to Rfam database...	0.65	0.55	0.77	56	52902	18	4	13	1	45
ASE_00168	RNaseP_nuc links to Rfam database...	0.28	0.31	0.26	20	60648	74	18	40	16	44
ASE_00169	RNaseP_bact_a links to Rfam database...	0.52	0.44	0.62	47	57215	30	0	29	1	60
ASE_00170	RNaseP_bact_a links to Rfam database...	0.63	0.55	0.73	51	48758	20	3	16	1	42
ASE_00171	RNaseP_bact_a links to Rfam database...	0.71	0.67	0.76	63	48433	20	4	16	0	31
ASE_00172	RNaseP_bact_a links to Rfam database...	0.81	0.71	0.94	75	58916	5	1	4	0	31
ASE_00174	RNaseP_bact_a links to Rfam database...	0.63	0.60	0.66	65	60977	33	8	25	0	44
ASE_00175	RNaseP_bact_a links to Rfam database...	0.62	0.55	0.70	59	59947	26	2	23	1	48
ASE_00176	RNaseP_bact_a links to Rfam database...	0.45	0.42	0.49	46	59937	50	6	42	2	64
ASE_00179	RNaseP_bact_a links to Rfam database...	0.65	0.56	0.75	47	44190	18	2	14	2	37
ASE_00180	RNaseP_bact_a links to Rfam database...	0.69	0.56	0.85	56	51294	10	2	8	0	44
ASE_00181	RNaseP_bact_a links to Rfam database...	0.60	0.53	0.67	56	57547	31	0	27	4	50
ASE_00182	RNaseP_bact_a links to Rfam database...	0.57	0.53	0.62	72	84139	44	3	41	0	64
ASE_00183	RNaseP_bact_a links to Rfam database...	0.74	0.68	0.81	77	61330	18	0	18	0	36
ASE_00184	RNaseP_bact_a links to Rfam database...	0.71	0.70	0.73	71	54518	26	4	22	0	31
ASE_00185	RNaseP_bact_a links to Rfam database...	0.79	0.69	0.92	88	73440	10	0	8	2	40
ASE_00186	RNaseP_bact_a links to Rfam database...	0.74	0.68	0.81	90	78892	26	1	20	5	42
ASE_00187	RNaseP_arch links to Rfam database...	0.53	0.43	0.65	49	68560	28	2	24	2	66
ASE_00189	RNaseP_bact_b links to Rfam database...	0.72	0.58	0.91	59	63125	8	1	5	2	43
ASE_00190	RNaseP_bact_b links to Rfam database...	0.75	0.58	0.98	52	45398	3	0	1	2	38
ASE_00192	RNaseP_bact_b links to Rfam database...	0.71	0.62	0.80	83	84562	26	2	19	5	50
ASE_00194	RNaseP_bact_b links to Rfam database...	0.53	0.45	0.64	53	73453	34	0	30	4	66
ASE_00195	-	0.70	0.62	0.78	83	86213	27	2	22	3	50
ASE_00196	RNaseP_arch links to Rfam database...	0.76	0.75	0.78	56	31554	20	2	14	4	19
ASE_00197	RNaseP_bact_a links to Rfam database...	0.67	0.57	0.78	83	89147	28	1	22	5	62
ASE_00198	RNaseP_bact_a links to Rfam database...	0.72	0.63	0.83	64	52573	13	2	11	0	38
ASE_00203	RNaseP_bact_a links to Rfam database...	0.77	0.69	0.87	66	46589	10	1	9	0	30
ASE_00204	RNaseP_bact_b links to Rfam database...	0.64	0.45	0.93	50	67842	8	0	4	4	62
ASE_00205	RNaseP_arch links to Rfam database...	0.53	0.49	0.59	44	45981	33	6	25	2	46
ASE_00209	RNaseP_arch links to Rfam database...	0.53	0.49	0.58	43	42997	31	5	26	0	45
ASE_00210	RNaseP_arch links to Rfam database...	0.58	0.58	0.58	38	27195	30	7	21	2	27
ASE_00212	RNaseP_bact_a links to Rfam database...	0.73	0.68	0.79	101	93833	31	3	24	4	47
ASE_00213	RNaseP_arch links to Rfam database...	0.77	0.67	0.90	44	27212	5	1	4	0	22
ASE_00214	RNaseP_bact_a links to Rfam database...	0.80	0.78	0.83	80	56184	23	3	13	7	23
ASE_00215	RNaseP_bact_a links to Rfam database...	0.48	0.41	0.56	41	48443	32	1	31	0	58
ASE_00216	RNaseP_bact_a links to Rfam database...	0.66	0.62	0.70	51	39267	22	3	19	0	31
ASE_00217	RNaseP_bact_a links to Rfam database...	0.34	0.29	0.41	26	40406	39	7	31	1	64
ASE_00221	RNaseP_bact_a links to Rfam database...	0.61	0.46	0.82	54	64554	12	1	11	0	63
ASE_00222	RNaseP_arch links to Rfam database...	0.66	0.62	0.70	98	111961	42	4	38	0	59
ASE_00227	RNaseP_bact_a links to Rfam database...	0.33	0.29	0.37	39	78897	67	5	62	0	94
ASE_00228	RNaseP_bact_a links to Rfam database...	0.78	0.74	0.82	64	46893	16	6	8	2	22
ASE_00229	RNaseP_bact_a links to Rfam database...	0.73	0.63	0.83	55	42420	12	3	8	1	32
ASE_00231	RNaseP_bact_a links to Rfam database...	0.74	0.66	0.83	63	47819	13	3	10	0	33
ASE_00232	RNaseP_bact_a links to Rfam database...	0.80	0.77	0.82	65	38424	14	7	7	0	19
ASE_00234	RNaseP_bact_a links to Rfam database...	0.58	0.49	0.70	63	75376	31	2	25	4	66
ASE_00237	RNaseP_nuc links to Rfam database...	0.00	0.00	0.00	0	45686	81	18	49	14	56
ASE_00238	RNaseP_bact_a links to Rfam database...	0.64	0.54	0.75	62	64178	22	1	20	1	52
ASE_00240	RNaseP_bact_a links to Rfam database...	0.59	0.54	0.64	50	46587	30	1	27	2	43
ASE_00241	RNaseP_bact_a links to Rfam database...	0.72	0.60	0.87	52	43896	8	1	7	0	35
ASE_00242	RNaseP_bact_a links to Rfam database...	0.73	0.59	0.92	66	61003	6	1	5	0	46
ASE_00246	RNaseP_nuc links to Rfam database...	0.38	0.34	0.43	23	48151	40	6	25	9	44
ASE_00247	RNaseP_nuc links to Rfam database...	0.27	0.30	0.25	19	54209	72	17	40	15	45
ASE_00248	RNaseP_bact_a links to Rfam database...	0.71	0.61	0.84	69	62399	15	0	13	2	45
ASE_00250	RNaseP_bact_a links to Rfam database...	0.67	0.53	0.85	69	78922	15	4	8	3	62
ASE_00252	RNaseP_bact_a links to Rfam database...	0.77	0.64	0.92	108	115323	13	0	9	4	60
ASE_00254	RNaseP_bact_a links to Rfam database...	0.76	0.68	0.85	56	36790	15	3	7	5	26
ASE_00255	RNaseP_bact_a links to Rfam database...	0.72	0.62	0.85	80	74597	14	3	11	0	50
ASE_00257	RNaseP_bact_a links to Rfam database...	0.76	0.63	0.91	61	50973	6	1	5	0	36
ASE_00259	RNaseP_bact_a links to Rfam database...	0.60	0.45	0.80	55	73084	16	1	13	2	66
ASE_00263	RNaseP_bact_a links to Rfam database...	0.70	0.62	0.80	74	70407	19	3	16	0	46
ASE_00264	RNaseP_nuc links to Rfam database...	0.53	0.49	0.57	49	49055	45	1	36	8	51
ASE_00267	RNaseP_bact_a links to Rfam database...	0.54	0.42	0.70	37	45097	22	0	16	6	51
ASE_00270	RNaseP_bact_a links to Rfam database...	0.76	0.73	0.79	93	72273	26	1	23	2	35
ASE_00274	RNaseP_bact_a links to Rfam database...	0.64	0.55	0.75	57	55535	19	5	14	0	46
ASE_00277	RNaseP_bact_a links to Rfam database...	0.59	0.53	0.66	48	48132	25	4	21	0	43
ASE_00279	RNaseP_bact_a links to Rfam database...	0.73	0.62	0.86	63	53228	10	3	7	0	38
ASE_00280	RNaseP_bact_a links to Rfam database...	0.70	0.61	0.81	60	51929	15	1	13	1	38
ASE_00281	RNaseP_bact_a links to Rfam database...	0.82	0.74	0.90	65	44479	13	0	7	6	23
ASE_00282	RNaseP_bact_a links to Rfam database...	0.55	0.51	0.60	65	77706	44	6	38	0	62
ASE_00283	RNaseP_bact_a links to Rfam database...	0.77	0.72	0.83	77	61683	16	5	11	0	30
ASE_00284	RNaseP_bact_a links to Rfam database...	0.69	0.68	0.72	73	58209	34	5	24	5	35
ASE_00285	RNaseP_bact_a links to Rfam database...	0.80	0.75	0.86	91	68900	23	3	12	8	31
ASE_00286	RNaseP_bact_a links to Rfam database...	0.67	0.57	0.80	52	46600	17	1	12	4	40
ASE_00287	RNaseP_bact_a links to Rfam database...	0.72	0.69	0.76	71	54853	23	2	20	1	32
ASE_00288	RNaseP_bact_a links to Rfam database...	0.77	0.59	1.00	55	46001	0	0	0	0	38
ASE_00289	RNaseP_bact_a links to Rfam database...	0.79	0.69	0.90	109	100904	15	5	7	3	48
ASE_00291	-	0.52	0.48	0.56	45	48436	36	7	28	1	49
ASE_00292	RNaseP_bact_a links to Rfam database...	0.68	0.60	0.76	83	81701	27	2	24	1	55
ASE_00294	RNaseP_bact_a links to Rfam database...	0.78	0.68	0.90	117	114351	14	1	12	1	54
ASE_00295	RNaseP_bact_a links to Rfam database...	0.72	0.63	0.84	82	73822	16	3	13	0	49
ASE_00296	RNaseP_bact_a links to Rfam database...	0.48	0.43	0.53	63	91688	56	5	50	1	82
ASE_00297	RNaseP_bact_a links to Rfam database...	0.68	0.62	0.74	61	52893	21	3	18	0	37
ASE_00298	RNaseP_bact_a links to Rfam database...	0.57	0.51	0.64	58	67438	34	1	31	2	55
ASE_00299	RNaseP_bact_a links to Rfam database...	0.63	0.56	0.72	56	49377	27	1	21	5	44
ASE_00313	RNaseP_nuc links to Rfam database...	0.69	0.66	0.71	59	62398	44	4	20	20	30
ASE_00316	RNaseP_nuc links to Rfam database...	0.78	0.63	0.97	62	107816	35	0	2	33	36
ASE_00318	RNaseP_bact_b links to Rfam database...	0.52	0.43	0.64	51	80120	32	4	25	3	67
ASE_00327	RNaseP_nuc links to Rfam database...	0.74	0.72	0.76	64	57207	25	6	14	5	25
ASE_00328	RNaseP_bact_b links to Rfam database...	0.70	0.60	0.83	67	72690	20	4	10	6	45
ASE_00330	RNaseP_nuc links to Rfam database...	0.75	0.71	0.79	64	56199	35	0	17	18	26
ASE_00332	RNaseP_bact_a links to Rfam database...	0.55	0.50	0.60	69	81695	47	2	44	1	69
ASE_00335	RNaseP_bact_b links to Rfam database...	0.68	0.59	0.78	68	75379	25	2	17	6	48
ASE_00337	RNaseP_nuc links to Rfam database...	0.60	0.59	0.62	42	39272	39	5	21	13	29
ASE_00338	RNaseP_nuc links to Rfam database...	0.77	0.68	0.87	67	66353	26	3	7	16	31
ASE_00339	RNaseP_bact_a links to Rfam database...	0.72	0.63	0.82	75	80108	26	0	17	9	44
ASE_00340	RNaseP_bact_a links to Rfam database...	0.76	0.75	0.77	64	45973	25	8	11	6	21
ASE_00342	RNaseP_bact_a links to Rfam database...	0.75	0.68	0.83	78	62387	17	1	15	1	37
ASE_00343	RNaseP_bact_a links to Rfam database...	0.77	0.67	0.87	76	83349	21	0	11	10	37
ASE_00346	RNaseP_arch links to Rfam database...	0.37	0.34	0.40	33	48123	51	3	46	2	64
ASE_00353	RNaseP_bact_a links to Rfam database...	0.57	0.51	0.63	55	57882	35	4	29	2	52
ASE_00359	RNaseP_arch links to Rfam database...	0.51	0.43	0.61	34	42722	22	3	19	0	46
ASE_00360	RNaseP_arch links to Rfam database...	0.50	0.45	0.57	29	29352	22	3	19	0	36
ASE_00361	RNaseP_bact_a links to Rfam database...	0.53	0.47	0.59	60	75364	45	9	33	3	67
ASE_00362	RNaseP_bact_a links to Rfam database...	0.66	0.59	0.74	54	48132	20	2	17	1	37
ASE_00363	RNaseP_bact_a links to Rfam database...	0.76	0.64	0.91	60	51294	7	0	6	1	34
ASE_00364	RNaseP_bact_a links to Rfam database...	0.63	0.56	0.70	59	54201	25	3	22	0	46
ASE_00366	RNaseP_bact_a links to Rfam database...	0.54	0.51	0.58	50	58567	36	5	31	0	48
ASE_00367	RNaseP_bact_a links to Rfam database...	0.62	0.55	0.71	47	43005	23	5	14	4	39
ASE_00369	RNaseP_bact_a links to Rfam database...	0.73	0.71	0.75	76	55843	27	0	26	1	31
ASE_00370	RNaseP_bact_a links to Rfam database...	0.49	0.43	0.55	36	41840	29	1	28	0	48
ASE_00372	RNaseP_bact_a links to Rfam database...	0.74	0.68	0.80	68	51918	20	3	14	3	32
ASE_00374	RNaseP_bact_a links to Rfam database...	0.64	0.61	0.68	54	44770	26	5	21	0	34
ASE_00375	RNaseP_bact_a links to Rfam database...	0.79	0.70	0.89	77	60291	10	1	9	0	33
ASE_00376	RNaseP_bact_a links to Rfam database...	0.62	0.57	0.68	60	56865	30	5	23	2	45
ASE_00377	RNaseP_bact_a links to Rfam database...	0.77	0.74	0.81	79	57532	24	3	16	5	28
ASE_00379	RNaseP_bact_a links to Rfam database...	0.70	0.62	0.79	55	45986	16	5	10	1	34
ASE_00380	RNaseP_bact_a links to Rfam database...	0.54	0.49	0.59	49	54863	35	4	30	1	50
ASE_00382	RNaseP_bact_a links to Rfam database...	0.69	0.58	0.82	49	41845	14	5	6	3	35
ASE_00383	RNaseP_bact_a links to Rfam database...	0.71	0.64	0.80	67	54531	19	5	12	2	38
ASE_00384	RNaseP_bact_a links to Rfam database...	0.73	0.71	0.76	65	48430	25	1	20	4	27
ASE_00385	RNaseP_bact_a links to Rfam database...	0.63	0.56	0.73	45	41843	17	7	10	0	36
ASE_00386	RNaseP_bact_a links to Rfam database...	0.65	0.60	0.70	58	50320	30	1	24	5	38
ASE_00387	RNaseP_bact_a links to Rfam database...	0.75	0.65	0.86	68	55866	13	1	10	2	36
ASE_00388	RNaseP_bact_a links to Rfam database...	0.74	0.61	0.90	54	45693	7	0	6	1	35
ASE_00390	RNaseP_bact_a links to Rfam database...	0.77	0.71	0.85	60	42124	18	0	11	7	25
ASE_00393	RNaseP_bact_a links to Rfam database...	0.72	0.65	0.81	60	47821	15	0	14	1	33
ASE_00394	RNaseP_bact_a links to Rfam database...	0.80	0.76	0.85	71	46887	14	3	10	1	22
ASE_00395	RNaseP_bact_a links to Rfam database...	0.77	0.73	0.81	61	41541	14	2	12	0	23
ASE_00396	RNaseP_bact_a links to Rfam database...	0.68	0.61	0.76	51	41549	18	5	11	2	32
ASE_00397	RNaseP_bact_a links to Rfam database...	0.81	0.72	0.92	76	54532	7	2	5	0	29
ASE_00398	RNaseP_bact_a links to Rfam database...	0.65	0.59	0.72	61	55860	25	1	23	1	43
ASE_00400	RNaseP_bact_a links to Rfam database...	0.74	0.65	0.83	69	57887	15	1	13	1	37
ASE_00401	RNaseP_bact_a links to Rfam database...	0.64	0.60	0.68	75	76918	35	5	30	0	51
ASE_00402	RNaseP_bact_a links to Rfam database...	0.68	0.60	0.77	51	42420	15	4	11	0	34
ASE_00403	RNaseP_bact_a links to Rfam database...	0.57	0.47	0.69	50	55873	22	0	22	0	57
ASE_00404	RNaseP_bact_a links to Rfam database...	0.58	0.51	0.66	43	43006	22	1	21	0	42
ASE_00406	RNaseP_bact_a links to Rfam database...	0.74	0.64	0.87	60	48759	11	0	9	2	34
ASE_00408	-	0.71	0.61	0.84	43	32334	8	1	7	0	28
ASE_00409	-	0.54	0.46	0.63	38	40981	22	0	22	0	45
ASE_00411	RNaseP_bact_a links to Rfam database...	0.59	0.46	0.75	41	49400	15	5	9	1	48
ASE_00412	RNaseP_bact_a links to Rfam database...	0.56	0.47	0.67	49	58238	24	7	17	0	56
ASE_00413	RNaseP_bact_a links to Rfam database...	0.47	0.46	0.49	37	44475	42	5	34	3	44
ASE_00414	RNaseP_bact_a links to Rfam database...	0.46	0.40	0.52	38	46287	42	2	33	7	57
ASE_00415	RNaseP_bact_a links to Rfam database...	0.70	0.65	0.74	67	54856	28	1	22	5	36
ASE_00416	RNaseP_bact_a links to Rfam database...	0.71	0.60	0.84	76	77330	20	0	15	5	51
ASE_00417	RNaseP_arch links to Rfam database...	0.43	0.41	0.46	41	54525	53	4	45	4	59
ASE_00418	RNaseP_arch links to Rfam database...	0.20	0.19	0.21	14	38714	55	2	51	2	61
ASE_00419	RNaseP_bact_a links to Rfam database...	0.78	0.74	0.83	76	54854	17	3	13	1	27
ASE_00422	RNaseP_bact_a links to Rfam database...	0.69	0.65	0.74	61	46889	26	6	15	5	33
ASE_00423	RNaseP_bact_a links to Rfam database...	0.65	0.64	0.66	70	56847	36	6	30	0	39
ASE_00426	RNaseP_bact_a links to Rfam database...	0.59	0.52	0.68	56	60993	26	1	25	0	52
ASE_00428	RNaseP_bact_a links to Rfam database...	0.65	0.59	0.72	74	76533	33	2	27	4	51
ASE_00429	-	0.59	0.56	0.62	37	28143	24	6	17	1	29
ASE_00430	RNaseP_bact_a links to Rfam database...	0.76	0.68	0.85	66	46893	17	3	9	5	31
ASE_00431	RNaseP_bact_a links to Rfam database...	0.71	0.61	0.82	58	46289	18	1	12	5	37
ASE_00434	RNaseP_bact_b links to Rfam database...	0.70	0.60	0.81	66	68184	23	3	12	8	44
ASE_00437	RNaseP_bact_a links to Rfam database...	0.55	0.41	0.74	56	79325	20	0	20	0	79
ASE_00438	RNaseP_bact_a links to Rfam database...	0.69	0.59	0.79	69	65979	18	0	18	0	47
ASE_00441	RNaseP_bact_a links to Rfam database...	0.79	0.72	0.86	81	64167	15	2	11	2	31
ASE_00447	RNaseP_bact_a links to Rfam database...	0.67	0.59	0.77	68	60290	25	0	20	5	48
ASE_00448	RNaseP_bact_a links to Rfam database...	0.53	0.42	0.66	47	64190	30	4	20	6	65
ASE_00451	RNaseP_bact_a links to Rfam database...	0.75	0.66	0.85	82	70780	14	2	12	0	43
CRW_00002	-	0.64	0.53	0.77	139	408879	64	18	24	22	125
CRW_00004	-	0.64	0.63	0.65	82	154163	71	6	39	26	49
CRW_00005	-	0.66	0.65	0.68	86	137948	63	6	35	22	46
CRW_00007	-	0.49	0.48	0.49	64	144861	71	26	40	5	69
CRW_00009	-	0.54	0.54	0.55	74	137940	80	8	53	19	64
CRW_00010	-	0.80	0.78	0.82	98	102711	35	8	14	13	28
CRW_00011	-	0.79	0.79	0.79	109	118203	45	6	23	16	29
CRW_00012	-	0.51	0.47	0.55	66	147033	60	16	38	6	75
CRW_00013	Intron_gpI links to Rfam database...	0.33	0.26	0.42	30	103669	55	7	34	14	85
CRW_00014	-	0.44	0.41	0.47	51	103631	69	9	49	11	72
CRW_00016	Intron_gpI links to Rfam database...	0.75	0.67	0.83	80	77325	26	6	10	10	40
CRW_00017	-	0.73	0.70	0.76	64	92151	32	5	15	12	27
CRW_00018	-	0.66	0.64	0.69	77	182598	78	10	25	43	44
CRW_00019	-	0.79	0.75	0.82	103	127640	46	4	18	24	34
CRW_00054	SSU_rRNA_bacteria links to Rfam database...	0.58	0.50	0.66	229	1107469	137	16	102	19	227
CRW_00068	SSU_rRNA_bacteria links to Rfam database...	0.59	0.52	0.66	236	1108950	134	23	96	15	221
CRW_00140	SSU_rRNA_bacteria links to Rfam database...	0.76	0.68	0.83	317	1135898	79	6	57	16	146
CRW_00173	SSU_rRNA_bacteria links to Rfam database...	0.37	0.34	0.40	150	1082284	231	30	192	9	295
CRW_00245	SSU_rRNA_bacteria links to Rfam database...	0.62	0.53	0.74	239	1106005	96	13	71	12	214
CRW_00270	SSU_rRNA_bacteria links to Rfam database...	0.66	0.55	0.79	250	1111971	79	11	54	14	205
CRW_00271	SSU_rRNA_bacteria links to Rfam database...	0.56	0.47	0.66	216	1122424	126	25	86	15	246
CRW_00273	SSU_rRNA_bacteria links to Rfam database...	0.52	0.47	0.58	208	1085244	163	20	129	14	238
CRW_00275	SSU_rRNA_bacteria links to Rfam database...	0.76	0.69	0.83	314	1114894	79	11	52	16	143
CRW_00277	SSU_rRNA_bacteria links to Rfam database...	0.53	0.43	0.66	194	1110503	106	22	76	8	259
CRW_00278	SSU_rRNA_bacteria links to Rfam database...	0.60	0.48	0.74	218	1129962	95	5	71	19	232
CRW_00280	SSU_rRNA_bacteria links to Rfam database...	0.67	0.58	0.77	265	1117916	90	11	68	11	188
CRW_00281	SSU_rRNA_bacteria links to Rfam database...	0.65	0.59	0.72	276	1144958	123	17	90	16	188
CRW_00283	SSU_rRNA_bacteria links to Rfam database...	0.42	0.31	0.56	136	1015781	124	17	91	16	296
CRW_00284	SSU_rRNA_bacteria links to Rfam database...	0.55	0.42	0.71	193	1131487	92	13	67	12	263
CRW_00285	SSU_rRNA_bacteria links to Rfam database...	0.79	0.71	0.88	327	1117890	60	13	30	17	131
CRW_00292	SSU_rRNA_bacteria links to Rfam database...	0.41	0.35	0.48	160	1123920	187	28	142	17	301
CRW_00338	-	0.21	0.20	0.23	79	1053084	273	64	199	10	316
CRW_00417	-	0.43	0.36	0.52	95	458219	97	18	71	8	167
CRW_00418	-	0.34	0.23	0.50	60	441209	66	5	56	5	200
CRW_00419	-	0.38	0.28	0.52	73	464026	72	7	60	5	192
CRW_00421	-	0.53	0.39	0.72	103	463060	53	4	36	13	163
CRW_00422	-	0.48	0.37	0.64	96	455385	74	8	46	20	167
CRW_00423	-	0.28	0.19	0.42	36	242470	55	5	45	5	153
CRW_00424	-	0.42	0.32	0.55	117	789184	104	10	85	9	246
CRW_00426	-	0.34	0.28	0.41	75	457262	117	15	94	8	190
CRW_00427	-	0.29	0.25	0.35	64	454397	126	20	100	6	197
CRW_00428	-	0.48	0.37	0.64	95	465946	65	11	43	11	165
CRW_00429	-	0.26	0.19	0.35	44	306809	86	9	74	3	189
CRW_00430	-	0.38	0.27	0.55	71	456361	67	8	50	9	195
CRW_00433	-	0.35	0.24	0.53	63	467908	59	3	54	2	200
CRW_00434	-	0.41	0.29	0.57	77	457310	60	10	49	1	186
CRW_00435	-	0.35	0.26	0.48	68	451584	77	6	67	4	197
CRW_00437	-	0.32	0.24	0.42	62	456344	92	9	75	8	198
CRW_00438	-	0.44	0.34	0.56	92	454416	83	8	65	10	176
CRW_00441	-	0.30	0.20	0.44	52	454463	69	13	53	3	210
CRW_00442	-	0.40	0.31	0.52	81	453471	81	13	63	5	180
CRW_00443	-	0.33	0.23	0.46	61	456358	81	9	62	10	199
CRW_00444	-	0.43	0.30	0.60	80	459228	59	5	48	6	183
CRW_00445	-	0.36	0.28	0.46	74	458242	92	11	76	5	191
CRW_00446	-	0.40	0.34	0.47	90	468803	112	14	89	9	175
CRW_00447	-	0.36	0.28	0.47	73	452521	91	10	72	9	187
CRW_00448	-	0.44	0.30	0.67	77	457331	46	7	31	8	184
CRW_00449	-	0.34	0.23	0.49	61	444971	65	6	58	1	199
CRW_00450	-	0.33	0.24	0.45	62	458265	89	11	65	13	200
CRW_00451	-	0.39	0.31	0.49	81	457279	94	10	76	8	183
CRW_00452	-	0.39	0.29	0.54	75	453490	77	8	55	14	187
CRW_00453	-	0.37	0.27	0.51	70	452540	75	7	59	9	191
CRW_00456	-	0.44	0.31	0.61	83	470798	60	10	44	6	182
CRW_00457	-	0.51	0.42	0.61	111	467846	86	13	58	15	153
CRW_00458	-	0.53	0.42	0.67	112	464963	60	6	49	5	152
CRW_00459	-	0.58	0.44	0.76	115	462090	50	5	31	14	148
CRW_00462	-	0.41	0.29	0.58	76	458271	66	6	50	10	185
CRW_00463	-	0.43	0.36	0.51	92	445860	95	22	66	7	162
CRW_00464	-	0.49	0.30	0.81	78	462145	24	1	17	6	186
CRW_00466	SSU_rRNA_bacteria links to Rfam database...	0.81	0.75	0.88	344	1116375	69	10	36	23	114
CRW_00530	-	0.34	0.26	0.45	71	534937	94	30	57	7	197
CRW_00535	-	0.33	0.29	0.37	96	898207	180	41	126	13	232
CRW_00538	-	0.34	0.25	0.46	76	812010	109	15	74	20	224
CRW_00542	-	0.20	0.18	0.23	56	994513	218	44	142	32	261
CRW_00589	SSU_rRNA_bacteria links to Rfam database...	0.44	0.37	0.53	164	1094152	163	21	123	19	281
CRW_00590	SSU_rRNA_bacteria links to Rfam database...	0.53	0.48	0.59	217	1119386	165	27	126	12	235
CRW_00591	SSU_rRNA_bacteria links to Rfam database...	0.70	0.63	0.77	282	1098536	110	15	70	25	164
CRW_00594	-	0.35	0.29	0.41	115	1028615	180	23	142	15	280
CRW_00596	-	0.32	0.28	0.35	110	1024285	218	26	175	17	276
CRW_00604	-	0.89	0.86	0.91	70	411701	129	5	2	122	11
CRW_00605	-	0.86	0.77	0.96	54	183865	94	2	0	92	16
CRW_00606	-	0.89	0.85	0.94	78	559070	188	0	5	183	14
CRW_00607	-	0.76	0.73	0.80	56	536060	259	10	4	245	21
CRW_00608	-	0.80	0.76	0.83	60	35706	23	0	12	11	19
CRW_00610	Intron_gpI links to Rfam database...	0.61	0.54	0.68	44	36250	21	6	15	0	37
CRW_00611	-	0.78	0.72	0.84	54	31311	18	0	10	8	21
CRW_00612	-	0.70	0.66	0.75	61	270399	153	0	20	133	32
CRW_00613	Intron_gpI links to Rfam database...	0.86	0.78	0.94	61	34915	13	1	3	9	17
CRW_00614	Intron_gpI links to Rfam database...	0.13	0.14	0.13	8	121707	95	15	41	39	49
CRW_00615	-	0.86	0.77	0.95	63	553812	211	0	3	208	19
CRW_00617	-	0.48	0.45	0.52	29	426370	178	4	23	151	35
CRW_00618	Intron_gpI links to Rfam database...	0.25	0.25	0.26	15	56223	56	5	37	14	46
CRW_00619	Intron_gpI links to Rfam database...	0.42	0.30	0.58	22	164987	82	4	12	66	51
CRW_00620	Intron_gpI links to Rfam database...	0.20	0.21	0.19	13	150907	93	14	41	38	50
CRW_00621	Intron_gpI links to Rfam database...	0.35	0.31	0.39	22	153125	120	4	30	86	49
CRW_00623	Intron_gpI links to Rfam database...	0.30	0.23	0.39	19	129746	89	5	25	59	64
CRW_00626	-	0.74	0.72	0.75	75	100925	49	11	14	24	29
CRW_00629	-	0.62	0.60	0.65	73	91265	42	14	26	2	49
CRW_00632	-	0.70	0.69	0.71	88	82904	42	2	34	6	40
CRW_00633	Intron_gpI links to Rfam database...	0.64	0.58	0.72	61	63461	25	5	19	1	45
CRW_00634	Intron_gpI links to Rfam database...	0.60	0.56	0.65	53	64538	30	10	19	1	41
CRW_00635	-	0.48	0.45	0.52	61	109161	65	9	47	9	76
CRW_00636	-	0.56	0.53	0.60	76	114833	57	8	43	6	67
CRW_00637	-	0.45	0.41	0.49	65	133770	69	7	61	1	93
CRW_00639	-	0.66	0.66	0.67	91	126620	48	14	31	3	47
CRW_00641	-	0.75	0.75	0.75	57	39827	24	5	14	5	19
CRW_00642	-	0.48	0.52	0.44	34	47200	54	10	34	10	31
CRW_00643	-	0.40	0.43	0.38	52	123118	90	23	63	4	70
CRW_00645	-	0.61	0.61	0.61	41	35444	32	2	24	6	26
CRW_00646	-	0.60	0.56	0.63	36	34923	24	4	17	3	28
CRW_00648	-	0.73	0.68	0.79	101	137947	37	9	18	10	47
CRW_00649	-	0.82	0.79	0.86	98	204366	90	5	11	74	26
CRW_00650	-	0.64	0.58	0.69	83	112930	41	2	35	4	59
CRW_00651	-	0.69	0.69	0.68	84	100004	41	13	27	1	37
CRW_00652	-	0.67	0.68	0.66	88	132222	56	13	32	11	42
CRW_00653	-	0.86	0.83	0.89	111	94705	18	3	11	4	23
CRW_00654	-	0.86	0.77	0.96	96	78110	6	0	4	2	28
CRW_00655	-	0.88	0.85	0.91	106	89136	13	2	9	2	18
CRW_00656	-	0.55	0.50	0.62	64	90421	45	7	33	5	65
CRW_00657	-	0.85	0.79	0.92	107	105914	16	2	7	7	29
CRW_00658	-	0.59	0.58	0.60	59	74593	42	16	23	3	43
CRW_00659	-	0.41	0.44	0.38	27	32314	47	14	30	3	34
CRW_00660	-	0.50	0.47	0.53	28	22102	26	3	22	1	32
CRW_00661	-	0.10	0.10	0.11	5	24263	44	18	24	2	46
CRW_00662	-	0.34	0.31	0.37	20	28626	41	3	31	7	45
CRW_00663	-	0.03	0.03	0.04	2	26056	49	8	40	1	59
CRW_00664	-	0.21	0.21	0.23	16	53557	58	9	46	3	62
CRW_00665	-	0.05	0.04	0.05	2	23616	35	11	24	0	46
CRW_00666	-	0.63	0.59	0.68	74	96032	37	10	25	2	52
CRW_00668	-	0.68	0.66	0.70	99	163736	56	12	31	13	51
CRW_00669	-	0.61	0.58	0.64	69	97354	38	15	23	0	50
CRW_00670	Intron_gpI links to Rfam database...	0.83	0.78	0.87	94	70017	14	6	8	0	26
CRW_00671	Intron_gpI links to Rfam database...	0.82	0.74	0.92	86	62742	8	1	6	1	31
CRW_00672	Intron_gpI links to Rfam database...	0.76	0.72	0.80	80	72290	24	8	12	4	31
CRW_00673	-	0.75	0.74	0.75	78	100024	34	16	10	8	27
CRW_00674	Intron_gpI links to Rfam database...	0.75	0.69	0.83	85	83333	20	7	11	2	39
CRW_00676	Intron_gpI links to Rfam database...	0.47	0.44	0.51	51	93428	52	14	35	3	64
CRW_00677	-	0.61	0.60	0.63	63	71910	38	12	25	1	42
CRW_00678	-	0.59	0.58	0.60	70	666319	212	9	37	166	51
CRW_00679	-	0.35	0.35	0.35	37	76531	70	14	54	2	70
CRW_00680	-	0.68	0.69	0.67	84	516510	190	13	29	148	38
CRW_00681	-	0.65	0.64	0.67	72	112942	51	14	22	15	40
CRW_00683	-	0.65	0.62	0.69	84	460198	151	11	27	113	51
CRW_00684	-	0.58	0.53	0.63	72	612057	178	14	28	136	63
CRW_00685	-	0.60	0.58	0.63	61	156983	60	15	21	24	45
CRW_00686	-	0.59	0.58	0.59	73	95142	59	7	44	8	52
CRW_00687	-	0.62	0.62	0.62	41	28614	28	9	16	3	25
CRW_00688	-	0.83	0.81	0.85	46	21891	9	3	5	1	11
CRW_00689	-	0.70	0.71	0.70	55	33591	25	8	16	1	22
CRW_00690	-	0.75	0.71	0.79	49	33349	18	5	8	5	20
CRW_00691	-	0.73	0.69	0.78	46	27202	16	1	12	3	21
CRW_00692	Intron_gpI links to Rfam database...	0.56	0.47	0.68	42	68573	21	7	13	1	48
CRW_00693	-	0.72	0.71	0.72	87	89132	46	5	29	12	35
CRW_00694	-	0.72	0.70	0.74	86	85789	34	6	24	4	36
CRW_00699	-	0.71	0.65	0.77	82	91699	28	2	23	3	44
CRW_00700	-	0.75	0.71	0.78	105	180766	52	4	26	22	42
CRW_00702	-	0.86	0.83	0.89	62	357365	141	7	1	133	13
CRW_00703	-	0.59	0.55	0.63	36	40413	27	4	17	6	30
CRW_00704	-	0.91	0.90	0.92	85	386668	146	4	3	139	9
CRW_00706	-	0.64	0.69	0.59	41	695540	219	11	18	190	18
CRW_00710	-	0.77	0.67	0.89	76	1040318	214	1	8	205	38
CRW_00712	-	0.78	0.76	0.80	82	952787	274	3	18	253	26
CRW_00713	-	0.84	0.76	0.93	77	731362	240	1	5	234	24
CRW_00714	-	0.80	0.71	0.89	76	186270	62	3	6	53	31
CRW_00715	-	0.79	0.75	0.84	78	69285	18	3	12	3	26
CRW_00716	-	0.83	0.72	0.96	64	193686	62	1	2	59	25
CRW_00717	-	0.71	0.57	0.89	85	153639	25	4	7	14	63
CRW_00718	-	0.73	0.59	0.90	113	189911	28	1	11	16	78
CRW_00719	-	0.69	0.57	0.83	52	230118	87	3	8	76	39
CRW_00720	-	0.50	0.44	0.58	40	208266	82	4	25	53	51
CRW_00721	-	0.73	0.62	0.86	42	58604	21	1	6	14	26
CRW_00764	-	0.10	0.06	0.16	12	253040	65	15	49	1	184
CRW_00765	-	0.46	0.37	0.57	96	452509	76	13	58	5	161
CRW_00766	-	0.32	0.24	0.44	57	440262	83	10	62	11	183
CRW_00768	-	0.59	0.47	0.73	122	471740	54	6	38	10	137
CRW_00769	-	0.56	0.46	0.66	117	451549	68	12	47	9	135
CRW_00772	SSU_rRNA_bacteria links to Rfam database...	0.44	0.34	0.57	136	945760	126	16	88	22	268
CRW_00773	-	0.42	0.37	0.48	95	451526	109	19	85	5	164
CRW_00774	-	0.50	0.35	0.72	93	488436	52	4	33	15	170
CRW_00775	-	0.19	0.08	0.41	18	314777	26	8	18	0	194
CRW_00777	-	0.40	0.34	0.47	102	719185	131	23	90	18	202
CRW_00778	SSU_rRNA_bacteria links to Rfam database...	0.42	0.29	0.60	111	1201840	104	12	62	30	273
CRW_00779	-	0.45	0.39	0.51	164	1031447	169	24	131	14	258
CRW_00780	-	0.29	0.21	0.39	54	475662	88	18	66	4	201
CRW_00783	-	0.32	0.22	0.45	58	453499	79	9	62	8	201
CRW_00784	-	0.34	0.27	0.43	70	456326	105	18	76	11	192
CRW_00785	-	0.46	0.34	0.61	86	452536	58	8	46	4	167
CRW_00787	-	0.39	0.32	0.49	97	646753	108	19	84	5	209
CRW_00789	SSU_rRNA_bacteria links to Rfam database...	0.55	0.46	0.66	206	1137473	121	11	96	14	241
CRW_00793	-	0.64	0.52	0.79	195	1048829	114	14	38	62	182
CRW_00794	-	0.37	0.28	0.49	68	434640	81	10	60	11	178
CRW_00796	-	0.28	0.19	0.43	44	384901	70	6	52	12	191
CRW_00797	-	0.37	0.28	0.49	97	693054	121	12	90	19	245
CRW_00801	-	0.44	0.39	0.49	96	438322	108	21	77	10	153
CRW_00802	-	0.41	0.32	0.52	82	460161	86	14	63	9	171
CRW_00813	-	0.47	0.44	0.49	59	530845	179	12	49	118	74
CRW_00815	-	0.70	0.66	0.75	104	159756	37	5	30	2	54
CRW_00816	-	0.48	0.44	0.53	57	143808	60	10	41	9	72
CRW_00820	-	0.72	0.63	0.82	92	136391	27	2	18	7	53
CRW_00849	SSU_rRNA_bacteria links to Rfam database...	0.68	0.63	0.73	295	1117857	132	9	99	24	175
CRW_00997	SSU_rRNA_bacteria links to Rfam database...	0.68	0.62	0.75	289	1135893	113	17	79	17	175
CRW_01134	-	0.39	0.28	0.55	119	965137	105	17	82	6	308
CRW_01168	-	0.51	0.42	0.62	174	900872	124	17	90	17	237
CRW_01186	-	0.43	0.34	0.55	133	836328	116	15	95	6	253
CRW_01188	-	0.23	0.20	0.27	77	837582	210	31	175	4	316
CRW_01189	-	0.25	0.23	0.28	90	862315	245	36	200	9	302
CRW_01214	-	0.44	0.30	0.64	123	932102	77	10	60	7	282
CRW_01222	-	0.34	0.27	0.44	108	913029	140	28	111	1	289
CRW_01224	-	0.37	0.28	0.49	111	913048	125	14	103	8	286
CRW_01239	-	0.26	0.20	0.35	76	840237	144	22	121	1	306
CRW_01250	-	0.39	0.33	0.47	123	781612	152	20	120	12	255
CRW_01260	-	0.21	0.15	0.29	60	913066	164	21	129	14	333
CRW_01266	-	0.42	0.36	0.50	136	818290	147	12	122	13	245
CRW_01271	-	0.48	0.40	0.56	153	827269	128	20	99	9	228
CRW_01275	-	0.39	0.33	0.47	142	1082355	170	34	125	11	290
CRW_01283	-	0.37	0.31	0.45	126	963684	171	17	139	15	283
CRW_01314	-	0.32	0.27	0.39	109	937487	176	23	146	7	298
CRW_01343	SSU_rRNA_archaea links to Rfam database...	0.50	0.42	0.59	182	977595	134	16	108	10	252
CRW_01344	-	0.38	0.30	0.47	110	791679	131	20	102	9	256
PDB_00005	Tymo_tRNA-like links to Rfam database...	0.71	0.71	0.71	10	932	4	0	4	0	4
PDB_00018	-	0.20	0.20	0.22	4	1017	14	2	12	0	16
PDB_00020	-	0.41	0.35	0.50	7	766	7	0	7	0	13
PDB_00041	-	0.70	0.50	1.00	6	624	0	0	0	0	6
PDB_00053	-	0.73	0.55	1.00	6	429	0	0	0	0	5
PDB_00056	-	0.93	0.88	1.00	14	616	0	0	0	0	2
PDB_00072	-	0.50	0.51	0.49	107	148022	111	24	87	0	103
PDB_00078	-	0.54	0.52	0.57	60	49664	46	5	41	0	55
PDB_00079	-	0.77	0.70	0.85	100	121653	46	7	11	28	42
PDB_00123	-	-0.01	0.00	0.00	0	4151	35	0	35	0	36
PDB_00124	-	0.17	0.20	0.18	2	485	9	2	7	0	8
PDB_00128	-	0.80	0.71	0.91	10	485	1	0	1	0	4
PDB_00134	-	0.79	0.63	1.00	5	373	0	0	0	0	3
PDB_00138	-	0.79	0.63	1.00	5	373	0	0	0	0	3
PDB_00209	-	0.96	1.00	0.92	11	549	1	1	0	0	0
PDB_00243	-	0.76	0.58	1.00	7	623	0	0	0	0	5
PDB_00278	-	0.42	0.38	0.48	27	24920	29	1	28	0	45
PDB_00352	-	0.92	0.84	1.00	16	1209	0	0	0	0	3
PDB_00370	-	0.00	0.00	0.00	0	15225	0	0	0	0	25
PDB_00403	-	0.57	0.55	0.60	84	124610	64	15	41	8	69
PDB_00409	-	0.33	0.37	0.30	91	688246	288	61	153	74	154
PDB_00423	-	0.55	0.50	0.61	37	26735	24	4	20	0	37
PDB_00447	-	0.41	0.25	0.69	11	7124	5	0	5	0	33
PDB_00571	tRNA links to Rfam database...	0.79	0.76	0.83	19	3298	4	2	2	0	6
PDB_00701	-	0.38	0.37	0.39	40	45348	63	9	54	0	69
PDB_00703	SSU_rRNA_bacteria links to Rfam database...	0.64	0.57	0.72	282	1073454	132	13	96	23	213
PDB_00713	-	0.52	0.43	0.64	9	2002	5	0	5	0	12
PDB_00716	HDV_ribozyme links to Rfam database...	-0.01	0.00	0.00	0	2680	21	0	21	0	23
PDB_00747	-	0.82	0.71	0.95	57	24471	3	0	3	0	23
PDB_00804	-	0.23	0.24	0.23	12	15348	42	10	30	2	38
PDB_00805	-	0.68	0.57	0.81	172	467816	53	6	34	13	130
PDB_00827	Intron_gpI links to Rfam database...	0.79	0.65	0.95	53	26972	5	0	3	2	28
PDB_00828	Purine links to Rfam database...	0.90	0.81	1.00	22	2463	0	0	0	0	5
PDB_00829	Purine links to Rfam database...	0.86	0.75	1.00	18	2260	0	0	0	0	6
PDB_00842	-	0.79	0.63	1.00	5	373	0	0	0	0	3
PDB_00851	-	0.45	0.39	0.53	16	4723	14	0	14	0	25
PDB_00857	-	0.93	0.87	1.00	13	1068	0	0	0	0	2
PDB_00874	-	0.10	0.10	0.13	2	931	13	2	11	0	18
PDB_00886	-	-0.01	0.00	0.00	0	4148	38	0	38	0	40
PDB_00917	-	0.58	0.54	0.64	51	35165	34	2	27	5	44
PDB_00918	-	0.75	0.57	1.00	4	321	0	0	0	0	3
PDB_00919	RNaseP_bact_a links to Rfam database...	0.53	0.47	0.62	48	44175	34	2	28	4	55
PDB_01009	tRNA links to Rfam database...	0.71	0.81	0.63	17	2458	10	5	5	0	4
PDB_01020	Purine links to Rfam database...	0.86	0.74	1.00	17	2261	1	0	0	1	6
PDB_01040	-	0.30	0.30	0.32	6	1109	13	0	13	0	14
PDB_01059	-	0.75	0.57	1.00	4	227	0	0	0	0	3
PDB_01070	-	0.32	0.26	0.40	14	12685	21	0	21	0	40
PDB_01073	SAM links to Rfam database...	0.80	0.65	1.00	22	4349	1	0	0	1	12
PDB_01092	glmS links to Rfam database...	0.73	0.63	0.85	33	10114	8	1	5	2	19
PDB_01129	-	0.28	0.28	0.28	20	35439	57	12	40	5	51
PDB_01157	-	0.25	0.22	0.29	22	50009	55	10	45	0	76
PDB_01166	-	0.51	0.48	0.54	101	181918	91	20	67	4	111
PDB_01194	-	0.52	0.33	0.83	5	490	1	1	0	0	10
PDB_01201	-	0.61	0.45	0.83	10	1116	2	0	2	0	12
PDB_01203	-	0.74	0.68	0.81	13	1160	3	2	1	0	6
PDB_01250	-	0.18	0.15	0.22	6	12063	21	5	16	0	35
PDB_01260	-	0.58	0.48	0.71	12	1813	5	1	4	0	13
PDB_01261	-	0.68	0.55	0.84	185	467809	34	0	34	0	151
PDB_01273	SSU_rRNA_bacteria links to Rfam database...	0.61	0.56	0.67	276	1117847	163	10	127	26	215
PDB_01281	-	-0.03	0.00	0.00	0	366	12	0	12	0	14
PDB_01299	-	0.71	0.67	0.77	10	890	3	2	1	0	5
PDB_01309	-	-0.01	0.00	0.00	0	9118	62	9	53	0	39
RFA_00597	Telomerase-vert links to Rfam database...	0.52	0.50	0.55	54	97804	55	4	41	10	55
RFA_00598	Telomerase-vert links to Rfam database...	0.49	0.48	0.51	48	84572	68	5	41	22	53
RFA_00599	Telomerase-vert links to Rfam database...	0.75	0.73	0.77	81	101370	40	8	16	16	30
RFA_00600	Telomerase-vert links to Rfam database...	0.22	0.22	0.21	22	120191	99	29	53	17	78
RFA_00601	Telomerase-vert links to Rfam database...	0.45	0.46	0.43	53	99113	82	25	44	13	61
RFA_00602	Telomerase-vert links to Rfam database...	0.42	0.43	0.40	50	101351	83	20	54	9	66
RFA_00632	HDV_ribozyme links to Rfam database...	0.42	0.36	0.50	10	4075	11	0	10	1	18
RFA_00636	HDV_ribozyme links to Rfam database...	0.65	0.64	0.67	18	3978	9	3	6	0	10
RFA_00767	Corona_pk3 links to Rfam database...	0.74	0.56	1.00	10	1881	0	0	0	0	8
RFA_00768	Corona_pk3 links to Rfam database...	1.00	1.00	1.00	18	1873	0	0	0	0	0
RFA_00769	Corona_pk3 links to Rfam database...	0.54	0.56	0.53	10	1934	9	4	5	0	8
RFA_00770	Corona_pk3 links to Rfam database...	0.64	0.50	0.82	9	2005	4	0	2	2	9
RFA_00773	Corona_pk3 links to Rfam database...	0.61	0.56	0.67	10	1938	8	1	4	3	8
RFA_00779	Corona_pk3 links to Rfam database...	0.74	0.56	1.00	10	1943	0	0	0	0	8
RFA_00808	RydC links to Rfam database...	0.75	0.56	1.00	9	2007	0	0	0	0	7
RFA_00809	RydC links to Rfam database...	0.47	0.38	0.60	6	2135	4	0	4	0	10
TMR_00007	tmRNA links to Rfam database...	0.50	0.46	0.54	50	61684	47	9	33	5	58
TMR_00008	tmRNA links to Rfam database...	0.66	0.59	0.72	63	65979	32	6	18	8	43
TMR_00010	tmRNA links to Rfam database...	0.32	0.29	0.35	28	57891	56	8	43	5	68
TMR_00012	tmRNA links to Rfam database...	0.43	0.36	0.51	29	64563	43	9	19	15	52
TMR_00014	tmRNA links to Rfam database...	0.70	0.69	0.71	76	68528	38	14	17	7	34
TMR_00017	tmRNA links to Rfam database...	0.70	0.55	0.89	56	67098	11	0	7	4	46
TMR_00018	tmRNA links to Rfam database...	0.40	0.33	0.48	30	64558	36	6	26	4	62
TMR_00028	tmRNA links to Rfam database...	0.74	0.72	0.76	70	62743	26	4	18	4	27
TMR_00030	tmRNA links to Rfam database...	0.48	0.40	0.59	44	75780	34	6	25	3	67
TMR_00034	tmRNA links to Rfam database...	0.67	0.65	0.69	72	59927	38	6	26	6	38
TMR_00035	tmRNA links to Rfam database...	0.63	0.55	0.71	54	67820	27	9	13	5	44
TMR_00036	tmRNA links to Rfam database...	0.65	0.59	0.71	60	90441	51	6	18	27	41
TMR_00038	tmRNA links to Rfam database...	0.23	0.21	0.25	23	71161	75	9	60	6	87
TMR_00042	tmRNA links to Rfam database...	0.38	0.34	0.44	33	62760	45	2	40	3	65
TMR_00046	tmRNA links to Rfam database...	0.50	0.48	0.53	46	62748	45	5	36	4	50
TMR_00047	tmRNA links to Rfam database...	0.38	0.33	0.43	19	48472	40	6	19	15	38
TMR_00048	tmRNA links to Rfam database...	0.49	0.48	0.50	46	64888	54	6	40	8	49
TMR_00049	tmRNA links to Rfam database...	0.60	0.52	0.70	45	63126	29	3	16	10	42
TMR_00051	tmRNA links to Rfam database...	0.73	0.63	0.86	59	65634	28	0	10	18	35
TMR_00055	tmRNA links to Rfam database...	0.39	0.33	0.45	38	78918	47	12	35	0	76
TMR_00057	tmRNA links to Rfam database...	0.19	0.18	0.20	14	73850	65	14	42	9	65
TMR_00061	tmRNA links to Rfam database...	0.30	0.27	0.33	27	59602	63	10	46	7	72
TMR_00062	tmRNA links to Rfam database...	0.67	0.63	0.71	65	78515	36	6	20	10	39
TMR_00064	tmRNA links to Rfam database...	0.56	0.48	0.65	49	76953	26	12	14	0	54
TMR_00065	tmRNA links to Rfam database...	0.58	0.48	0.70	51	76563	23	8	14	1	55
TMR_00067	tmRNA links to Rfam database...	0.48	0.44	0.54	50	82122	51	5	38	8	64
TMR_00073	tmRNA links to Rfam database...	0.68	0.60	0.77	70	65612	22	5	16	1	47
TMR_00076	tmRNA links to Rfam database...	0.59	0.49	0.70	49	70806	27	8	13	6	51
TMR_00080	tmRNA links to Rfam database...	0.65	0.60	0.70	58	70417	26	6	19	1	38
TMR_00081	tmRNA links to Rfam database...	0.68	0.58	0.79	62	67083	17	3	13	1	44
TMR_00082	tmRNA links to Rfam database...	0.78	0.77	0.80	74	67803	24	8	11	5	22
TMR_00083	tmRNA links to Rfam database...	0.63	0.62	0.64	65	68163	39	11	26	2	40
TMR_00092	tmRNA links to Rfam database...	0.65	0.65	0.64	66	67425	41	9	28	4	35
TMR_00093	tmRNA links to Rfam database...	0.59	0.54	0.64	55	64175	34	8	23	3	47
TMR_00096	tmRNA links to Rfam database...	0.64	0.61	0.68	61	64890	34	10	19	5	39
TMR_00101	tmRNA links to Rfam database...	0.54	0.49	0.61	52	64176	35	7	26	2	55
TMR_00102	tmRNA links to Rfam database...	0.31	0.29	0.34	29	64176	60	10	46	4	72
TMR_00103	tmRNA links to Rfam database...	0.64	0.61	0.68	66	64164	32	7	24	1	42
TMR_00104	-	0.21	0.21	0.21	15	66725	62	26	29	7	55
TMR_00106	tmRNA links to Rfam database...	0.59	0.53	0.67	63	90006	34	10	21	3	57
TMR_00109	tmRNA links to Rfam database...	0.51	0.48	0.56	58	88306	51	13	33	5	64
TMR_00111	tmRNA links to Rfam database...	0.58	0.52	0.64	63	90427	39	2	33	4	59
TMR_00116	tmRNA links to Rfam database...	0.81	0.73	0.90	76	64896	21	2	6	13	28
TMR_00117	tmRNA links to Rfam database...	0.81	0.76	0.86	90	80095	24	6	9	9	28
TMR_00118	tmRNA links to Rfam database...	0.56	0.52	0.60	62	81303	48	1	40	7	58
TMR_00119	tmRNA links to Rfam database...	0.72	0.63	0.83	65	71932	18	2	11	5	39
TMR_00123	tmRNA links to Rfam database...	0.85	0.77	0.93	78	66346	11	0	6	5	23
TMR_00124	tmRNA links to Rfam database...	0.65	0.62	0.68	61	70410	39	12	17	10	37
TMR_00125	tmRNA links to Rfam database...	0.61	0.57	0.67	56	64177	32	9	19	4	43
TMR_00127	tmRNA links to Rfam database...	0.70	0.68	0.72	66	62743	33	2	24	7	31
TMR_00128	tmRNA links to Rfam database...	0.52	0.54	0.51	52	60973	50	14	36	0	44
TMR_00131	tmRNA links to Rfam database...	0.60	0.49	0.72	49	64912	26	3	16	7	50
TMR_00135	tmRNA links to Rfam database...	0.66	0.60	0.73	59	62754	28	5	17	6	40
TMR_00136	tmRNA links to Rfam database...	0.32	0.30	0.36	30	74607	57	13	41	3	71
TMR_00137	tmRNA links to Rfam database...	0.34	0.28	0.40	25	61013	45	6	31	8	64
TMR_00139	tmRNA links to Rfam database...	0.59	0.62	0.57	56	62029	52	19	24	9	35
TMR_00140	tmRNA links to Rfam database...	0.56	0.52	0.61	52	73835	49	3	30	16	48
TMR_00142	tmRNA links to Rfam database...	0.65	0.63	0.67	64	70780	39	9	23	7	38
TMR_00143	tmRNA links to Rfam database...	0.48	0.46	0.51	47	64528	55	7	38	10	56
TMR_00144	tmRNA links to Rfam database...	0.46	0.45	0.48	46	74209	50	10	40	0	57
TMR_00146	tmRNA links to Rfam database...	0.85	0.88	0.82	37	32086	28	4	4	20	5
TMR_00150	tmRNA links to Rfam database...	0.77	0.71	0.83	30	43035	31	3	3	25	12
TMR_00152	tmRNA links to Rfam database...	0.38	0.30	0.48	35	81333	45	6	32	7	80
TMR_00155	tmRNA links to Rfam database...	0.72	0.64	0.81	67	61693	25	2	14	9	37
TMR_00156	tmRNA links to Rfam database...	0.68	0.63	0.73	61	60294	29	3	20	6	36
TMR_00158	tmRNA links to Rfam database...	0.57	0.51	0.64	50	60648	32	2	26	4	49
TMR_00159	tmRNA links to Rfam database...	0.65	0.57	0.74	52	62058	24	2	16	6	40
TMR_00160	tmRNA links to Rfam database...	0.45	0.42	0.48	40	64537	49	8	35	6	55
TMR_00164	tmRNA links to Rfam database...	0.41	0.36	0.47	38	66714	51	6	37	8	68
TMR_00165	tmRNA links to Rfam database...	0.61	0.48	0.76	47	61714	22	6	9	7	50
TMR_00166	tmRNA links to Rfam database...	0.46	0.38	0.58	38	61710	34	1	27	6	63
TMR_00168	tmRNA links to Rfam database...	0.74	0.69	0.78	79	60974	25	0	22	3	35
TMR_00173	tmRNA links to Rfam database...	0.50	0.40	0.63	17	42168	32	2	8	22	25
TMR_00179	tmRNA links to Rfam database...	0.68	0.64	0.72	63	67073	33	5	20	8	35
TMR_00180	tmRNA links to Rfam database...	0.69	0.66	0.73	65	67072	36	5	19	12	34
TMR_00182	tmRNA links to Rfam database...	0.52	0.46	0.59	47	66350	38	4	29	5	55
TMR_00183	tmRNA links to Rfam database...	0.29	0.26	0.33	27	63109	59	7	47	5	76
TMR_00184	tmRNA links to Rfam database...	0.47	0.43	0.51	44	63103	51	3	40	8	58
TMR_00193	tmRNA links to Rfam database...	0.49	0.43	0.56	34	59279	36	7	20	9	46
TMR_00194	tmRNA links to Rfam database...	0.66	0.58	0.75	54	62763	26	3	15	8	39
TMR_00196	tmRNA links to Rfam database...	0.47	0.40	0.54	39	61003	38	8	25	5	58
TMR_00199	tmRNA links to Rfam database...	0.60	0.60	0.60	55	62743	44	16	21	7	37
TMR_00200	-	0.61	0.48	0.77	36	41569	21	5	6	10	39
TMR_00204	tmRNA links to Rfam database...	0.49	0.45	0.52	44	60294	46	14	26	6	53
TMR_00207	tmRNA links to Rfam database...	0.47	0.40	0.56	41	72317	36	3	29	4	62
TMR_00223	tmRNA links to Rfam database...	0.49	0.45	0.54	43	64181	41	9	28	4	52
TMR_00224	tmRNA links to Rfam database...	0.50	0.39	0.64	39	64919	27	4	18	5	62
TMR_00226	tmRNA links to Rfam database...	0.49	0.46	0.52	48	69659	50	12	32	6	57
TMR_00227	tmRNA links to Rfam database...	0.58	0.55	0.62	56	70034	38	8	27	3	45
TMR_00228	tmRNA links to Rfam database...	0.32	0.31	0.32	34	88305	76	20	51	5	74
TMR_00234	tmRNA links to Rfam database...	0.62	0.55	0.70	56	58916	25	2	22	1	46
TMR_00238	tmRNA links to Rfam database...	0.32	0.30	0.35	30	84580	62	12	44	6	71
TMR_00239	tmRNA links to Rfam database...	0.54	0.53	0.55	51	61683	44	9	33	2	45
TMR_00240	tmRNA links to Rfam database...	0.62	0.58	0.67	49	63117	30	10	14	6	36
TMR_00246	-	0.44	0.41	0.47	14	78180	75	0	16	59	20
TMR_00248	tmRNA links to Rfam database...	0.27	0.32	0.24	12	54235	58	17	21	20	26
TMR_00257	tmRNA links to Rfam database...	0.63	0.50	0.80	49	67100	18	2	10	6	49
TMR_00259	tmRNA links to Rfam database...	0.56	0.56	0.56	58	67793	48	13	32	3	45
TMR_00261	tmRNA links to Rfam database...	0.62	0.59	0.65	60	66702	37	10	23	4	41
TMR_00262	tmRNA links to Rfam database...	0.65	0.60	0.71	62	74218	25	14	11	0	42
TMR_00271	tmRNA links to Rfam database...	0.62	0.56	0.68	51	64186	35	6	18	11	40
TMR_00274	tmRNA links to Rfam database...	0.73	0.71	0.75	75	66695	32	7	18	7	30
TMR_00278	tmRNA links to Rfam database...	0.46	0.44	0.49	45	67804	55	1	46	8	57
TMR_00279	tmRNA links to Rfam database...	0.55	0.53	0.57	50	68919	47	6	31	10	44
TMR_00280	tmRNA links to Rfam database...	0.65	0.62	0.68	63	65973	44	4	26	14	38
TMR_00283	tmRNA links to Rfam database...	0.62	0.48	0.79	46	65283	22	1	11	10	50
TMR_00289	tmRNA links to Rfam database...	0.62	0.57	0.68	56	67079	38	2	24	12	42
TMR_00290	tmRNA links to Rfam database...	0.49	0.48	0.51	44	64175	51	3	39	9	48
TMR_00296	tmRNA links to Rfam database...	0.35	0.33	0.38	32	68922	57	10	42	5	66
TMR_00298	tmRNA links to Rfam database...	0.61	0.55	0.68	56	68183	33	6	20	7	45
TMR_00300	tmRNA links to Rfam database...	0.65	0.62	0.70	69	70401	40	8	22	10	43
TMR_00301	tmRNA links to Rfam database...	0.53	0.42	0.67	40	82155	35	6	14	15	56
TMR_00302	tmRNA links to Rfam database...	0.45	0.43	0.49	40	77339	48	12	30	6	54
TMR_00305	tmRNA links to Rfam database...	0.65	0.57	0.73	58	60996	28	3	18	7	44
TMR_00306	tmRNA links to Rfam database...	0.59	0.58	0.60	61	64160	42	3	37	2	45
TMR_00310	tmRNA links to Rfam database...	0.71	0.68	0.74	67	63813	27	7	16	4	31
TMR_00317	tmRNA links to Rfam database...	0.65	0.60	0.71	61	68179	28	4	21	3	41
TMR_00331	tmRNA links to Rfam database...	0.48	0.46	0.50	38	66719	47	3	35	9	44
TMR_00332	tmRNA links to Rfam database...	0.61	0.46	0.81	46	67104	16	0	11	5	53
TMR_00334	tmRNA links to Rfam database...	0.57	0.49	0.67	49	66722	29	4	20	5	52
TMR_00337	tmRNA links to Rfam database...	0.69	0.66	0.71	79	82917	36	11	21	4	40
TMR_00340	tmRNA links to Rfam database...	0.49	0.38	0.63	31	64212	36	3	15	18	50
TMR_00341	tmRNA links to Rfam database...	0.40	0.37	0.44	34	63112	51	12	32	7	58
TMR_00343	tmRNA links to Rfam database...	0.52	0.47	0.58	49	64896	43	5	30	8	56
TMR_00345	tmRNA links to Rfam database...	0.73	0.68	0.79	71	63813	26	3	16	7	33
TMR_00346	tmRNA links to Rfam database...	0.56	0.54	0.58	51	64173	37	14	23	0	43
TMR_00348	tmRNA links to Rfam database...	0.35	0.28	0.42	28	77355	55	8	30	17	71
TMR_00352	tmRNA links to Rfam database...	0.25	0.23	0.28	17	95205	77	11	33	33	58
TMR_00353	tmRNA links to Rfam database...	0.53	0.52	0.54	55	84154	56	15	31	10	50
TMR_00357	tmRNA links to Rfam database...	0.52	0.49	0.56	45	82948	53	16	19	18	47
TMR_00358	tmRNA links to Rfam database...	0.74	0.61	0.90	60	75011	22	1	6	15	39
TMR_00361	-	0.37	0.40	0.35	29	93445	72	21	33	18	43
TMR_00366	tmRNA links to Rfam database...	0.63	0.53	0.76	53	67826	28	5	12	11	47
TMR_00372	tmRNA links to Rfam database...	0.62	0.56	0.68	54	70421	38	6	19	13	42
TMR_00374	tmRNA links to Rfam database...	0.45	0.42	0.47	39	81727	48	7	37	4	53
TMR_00375	tmRNA links to Rfam database...	0.61	0.61	0.61	60	73438	38	11	27	0	38
TMR_00376	tmRNA links to Rfam database...	0.66	0.63	0.69	60	74604	41	10	17	14	35
TMR_00378	tmRNA links to Rfam database...	0.32	0.28	0.38	27	67824	56	14	31	11	70
TMR_00383	tmRNA links to Rfam database...	0.55	0.43	0.69	43	66733	27	5	14	8	57
TMR_00384	tmRNA links to Rfam database...	0.44	0.31	0.61	34	65647	26	0	22	4	74
TMR_00393	tmRNA links to Rfam database...	0.61	0.62	0.59	33	53245	48	6	17	25	20
TMR_00395	tmRNA links to Rfam database...	0.81	0.72	0.91	78	64534	13	4	4	5	31
TMR_00398	tmRNA links to Rfam database...	0.78	0.69	0.89	73	65259	15	0	9	6	33
TMR_00399	tmRNA links to Rfam database...	0.41	0.33	0.51	31	64919	37	11	19	7	63
TMR_00404	tmRNA links to Rfam database...	0.60	0.55	0.65	51	67450	38	6	21	11	41
TMR_00408	tmRNA links to Rfam database...	0.66	0.68	0.64	60	65972	43	13	21	9	28
TMR_00409	tmRNA links to Rfam database...	0.72	0.80	0.64	37	68577	53	6	15	32	9
TMR_00411	tmRNA links to Rfam database...	0.63	0.57	0.68	50	61002	31	6	17	8	37
TMR_00415	tmRNA links to Rfam database...	0.72	0.67	0.77	68	67073	21	4	16	1	33
TMR_00419	tmRNA links to Rfam database...	0.74	0.71	0.77	79	81708	41	6	17	18	32
TMR_00422	tmRNA links to Rfam database...	0.52	0.53	0.52	49	67801	56	11	35	10	43
TMR_00423	tmRNA links to Rfam database...	0.41	0.42	0.40	31	63825	54	16	31	7	42
TMR_00427	tmRNA links to Rfam database...	0.60	0.52	0.69	50	67456	27	10	12	5	47
TMR_00429	tmRNA links to Rfam database...	0.42	0.39	0.46	42	74600	58	9	40	9	67
TMR_00430	tmRNA links to Rfam database...	0.27	0.23	0.33	25	82545	51	13	38	0	84
TMR_00431	tmRNA links to Rfam database...	0.82	0.69	0.97	38	51964	34	1	0	33	17
TMR_00432	tmRNA links to Rfam database...	0.40	0.34	0.49	35	79728	44	5	32	7	69
TMR_00433	tmRNA links to Rfam database...	0.63	0.56	0.71	59	80117	29	2	22	5	47
TMR_00439	tmRNA links to Rfam database...	0.50	0.45	0.56	45	68554	46	9	27	10	56
TMR_00441	tmRNA links to Rfam database...	0.13	0.12	0.13	10	62053	73	15	50	8	73
TMR_00443	tmRNA links to Rfam database...	0.65	0.55	0.77	57	67087	24	8	9	7	47
TMR_00448	tmRNA links to Rfam database...	0.57	0.49	0.67	45	62061	28	0	22	6	47
TMR_00451	tmRNA links to Rfam database...	0.26	0.26	0.27	23	63461	66	16	46	4	66
TMR_00457	tmRNA links to Rfam database...	0.51	0.48	0.53	49	78514	48	5	38	5	53
TMR_00458	tmRNA links to Rfam database...	0.48	0.40	0.59	37	63483	33	6	20	7	56
TMR_00460	tmRNA links to Rfam database...	0.73	0.68	0.79	72	79310	25	3	16	6	34
TMR_00465	tmRNA links to Rfam database...	0.46	0.41	0.51	39	64185	41	13	24	4	55
TMR_00469	tmRNA links to Rfam database...	0.52	0.51	0.54	51	64525	48	16	28	4	49
TMR_00472	tmRNA links to Rfam database...	0.55	0.44	0.67	43	64556	26	6	15	5	54
TMR_00478	tmRNA links to Rfam database...	0.44	0.44	0.44	44	71911	60	19	36	5	55
TMR_00498	tmRNA links to Rfam database...	0.47	0.45	0.49	45	68915	54	16	30	8	54
TMR_00499	tmRNA links to Rfam database...	0.29	0.29	0.30	29	64522	74	6	63	5	70
TMR_00501	tmRNA links to Rfam database...	0.51	0.46	0.57	42	62407	33	7	25	1	50
TMR_00502	tmRNA links to Rfam database...	0.47	0.41	0.54	38	75396	39	7	25	7	55
TMR_00503	tmRNA links to Rfam database...	0.76	0.69	0.84	77	67804	23	3	12	8	34
TMR_00519	tmRNA links to Rfam database...	0.44	0.35	0.57	33	63132	35	7	18	10	62
TMR_00520	tmRNA links to Rfam database...	0.52	0.46	0.58	46	63110	43	7	27	9	53
TMR_00522	tmRNA links to Rfam database...	0.53	0.47	0.60	46	63113	39	5	26	8	51
TMR_00528	tmRNA links to Rfam database...	0.43	0.40	0.46	39	63106	55	11	34	10	58
TMR_00540	tmRNA links to Rfam database...	0.70	0.63	0.79	65	73454	27	6	11	10	39
TMR_00541	tmRNA links to Rfam database...	0.62	0.61	0.63	64	61674	44	3	35	6	41
TMR_00544	tmRNA links to Rfam database...	0.52	0.46	0.57	50	89589	44	6	31	7	58
TMR_00547	tmRNA links to Rfam database...	0.55	0.49	0.62	49	65262	32	1	29	2	51
TMR_00553	tmRNA links to Rfam database...	0.52	0.52	0.53	42	48125	44	8	30	6	39
TMR_00559	tmRNA links to Rfam database...	0.54	0.55	0.53	56	62375	56	10	40	6	45
TMR_00560	tmRNA links to Rfam database...	0.63	0.50	0.80	49	61014	17	3	9	5	49
TMR_00562	tmRNA links to Rfam database...	0.59	0.61	0.57	62	72663	53	13	33	7	40
TMR_00563	tmRNA links to Rfam database...	0.59	0.55	0.62	57	75374	43	12	23	8	46
TMR_00566	tmRNA links to Rfam database...	0.68	0.58	0.79	58	60653	22	2	13	7	42
TMR_00568	tmRNA links to Rfam database...	0.66	0.53	0.84	52	60664	16	0	10	6	47
TMR_00570	tmRNA links to Rfam database...	0.67	0.60	0.74	58	60300	27	2	18	7	39
TMR_00571	tmRNA links to Rfam database...	0.68	0.60	0.79	59	60651	24	2	14	8	40
TMR_00576	tmRNA links to Rfam database...	0.67	0.65	0.69	66	60283	36	7	22	7	36
TMR_00579	tmRNA links to Rfam database...	0.28	0.28	0.28	25	80512	76	12	52	12	65
TMR_00580	tmRNA links to Rfam database...	0.74	0.71	0.77	71	60634	29	2	19	8	29
TMR_00581	tmRNA links to Rfam database...	0.69	0.60	0.79	59	62406	23	3	13	7	39
TMR_00584	tmRNA links to Rfam database...	0.61	0.59	0.64	57	60986	36	3	29	4	40
TMR_00586	tmRNA links to Rfam database...	0.58	0.53	0.65	51	60996	34	6	22	6	46
TMR_00587	tmRNA links to Rfam database...	0.79	0.76	0.82	76	61332	22	5	12	5	24
TMR_00588	tmRNA links to Rfam database...	0.37	0.37	0.37	37	77321	64	21	42	1	64
TMR_00594	tmRNA links to Rfam database...	0.48	0.39	0.59	41	79332	31	6	22	3	63
TMR_00596	tmRNA links to Rfam database...	0.41	0.37	0.45	35	78132	53	8	35	10	60
TMR_00599	tmRNA links to Rfam database...	0.32	0.33	0.31	24	63112	55	21	33	1	48
TMR_00600	tmRNA links to Rfam database...	0.53	0.42	0.67	48	79728	28	2	22	4	67
TMR_00601	tmRNA links to Rfam database...	0.61	0.48	0.77	20	58970	37	0	6	31	22
TMR_00603	tmRNA links to Rfam database...	0.80	0.70	0.91	30	60345	32	1	2	29	13
TMR_00604	tmRNA links to Rfam database...	0.74	0.68	0.80	76	62740	20	4	15	1	36
TMR_00605	tmRNA links to Rfam database...	0.56	0.50	0.62	54	74218	37	8	25	4	54
TMR_00606	tmRNA links to Rfam database...	0.66	0.61	0.72	65	68916	30	7	18	5	42
TMR_00609	tmRNA links to Rfam database...	0.73	0.67	0.78	76	63449	21	4	17	0	37
TMR_00610	tmRNA links to Rfam database...	0.70	0.66	0.75	69	62036	34	3	20	11	35
TMR_00611	tmRNA links to Rfam database...	0.65	0.66	0.64	67	61320	43	8	30	5	35
TMR_00612	tmRNA links to Rfam database...	0.47	0.46	0.48	48	60627	55	5	46	4	56
TMR_00614	tmRNA links to Rfam database...	0.72	0.69	0.75	72	60979	33	3	21	9	32
TMR_00615	tmRNA links to Rfam database...	0.68	0.68	0.68	65	63808	31	12	18	1	31
TMR_00616	tmRNA links to Rfam database...	0.53	0.45	0.62	45	67088	33	6	22	5	54
TMR_00617	tmRNA links to Rfam database...	0.32	0.34	0.29	20	34648	53	11	37	5	38
TMR_00623	tmRNA links to Rfam database...	0.55	0.51	0.60	55	61333	46	1	36	9	53
TMR_00624	tmRNA links to Rfam database...	0.83	0.74	0.93	80	62395	14	3	3	8	28
TMR_00625	tmRNA links to Rfam database...	0.31	0.30	0.31	32	78900	72	18	53	1	74
TMR_00626	tmRNA links to Rfam database...	0.48	0.42	0.55	46	67812	43	5	33	5	63
TMR_00680	tmRNA links to Rfam database...	0.27	0.27	0.28	27	67799	76	13	57	6	72
TMR_00681	tmRNA links to Rfam database...	0.58	0.57	0.60	55	65975	46	6	30	10	42
TMR_00683	tmRNA links to Rfam database...	0.26	0.23	0.29	23	82949	65	14	42	9	77
TMR_00686	tmRNA links to Rfam database...	0.53	0.51	0.56	55	71154	55	9	35	11	53
TMR_00687	tmRNA links to Rfam database...	0.47	0.47	0.48	52	71523	61	9	47	5	59
TMR_00696	tmRNA links to Rfam database...	0.51	0.50	0.53	57	84970	62	9	42	11	57
TMR_00698	tmRNA links to Rfam database...	0.58	0.50	0.68	52	63113	28	6	19	3	52
TMR_00699	tmRNA links to Rfam database...	0.80	0.72	0.89	73	67079	13	3	6	4	29
TMR_00702	tmRNA links to Rfam database...	0.58	0.48	0.70	48	67092	26	5	16	5	52
TMR_00703	tmRNA links to Rfam database...	0.53	0.45	0.61	45	67454	34	3	26	5	54
TMR_00706	tmRNA links to Rfam database...	0.64	0.60	0.67	62	66338	33	3	27	3	41
TMR_00711	tmRNA links to Rfam database...	0.60	0.58	0.61	57	67803	39	12	24	3	41
TMR_00712	tmRNA links to Rfam database...	0.32	0.29	0.36	32	78517	65	15	42	8	77
TMR_00716	tmRNA links to Rfam database...	0.34	0.27	0.43	27	62772	40	11	25	4	73

^top

Performance of CRWrnafold - scored lower in this pairwise comparison

1. Total counts & total scores for CRWrnafold

Total Base Pair Counts
Total TP	41196
Total TN	135219201
Total FP	73518
Total FP CONTRA	10702
Total FP INCONS	52585
Total FP COMP	10231
Total FN	62418

Total Scores
MCC	0.395
Average MCC ± 95% Confidence Intervals	0.408 ± 0.013
Sensitivity	0.398
Positive Predictive Value	0.394
Nr of predictions	790

^top

2. Individual counts for CRWrnafold [ download as .csv ]

RNA Chain	Rfam family	MCC	SENS	PPV	TP	TN	FP	FP CONTRA	FP INCONS	FP COMP	FN
ASE_00001	RNaseP_arch links to Rfam database...	0.61	0.57	0.64	43	34124	30	3	21	6	32
ASE_00002	RNaseP_arch links to Rfam database...	0.59	0.56	0.63	41	35446	31	2	22	7	32
ASE_00004	RNaseP_bact_a links to Rfam database...	0.69	0.68	0.69	66	47800	30	9	20	1	31
ASE_00005	RNaseP_bact_a links to Rfam database...	0.50	0.48	0.52	56	57863	51	3	48	0	61
ASE_00006	RNaseP_bact_a links to Rfam database...	0.29	0.29	0.30	27	47495	65	8	56	1	66
ASE_00007	RNaseP_bact_a links to Rfam database...	0.34	0.33	0.36	36	59585	65	3	61	1	74
ASE_00009	RNaseP_arch links to Rfam database...	0.68	0.67	0.69	45	26041	20	5	15	0	22
ASE_00012	RNaseP_bact_a links to Rfam database...	0.42	0.41	0.43	51	73800	75	6	63	6	72
ASE_00014	RNaseP_arch links to Rfam database...	0.47	0.47	0.47	50	54179	57	7	49	1	56
ASE_00017	RNaseP_nuc links to Rfam database...	0.25	0.28	0.22	18	50958	82	22	42	18	46
ASE_00018	RNaseP_bact_a links to Rfam database...	0.53	0.51	0.56	68	80480	54	4	49	1	66
ASE_00020	RNaseP_bact_a links to Rfam database...	0.63	0.60	0.68	75	73809	39	6	30	3	51
ASE_00021	RNaseP_bact_a links to Rfam database...	0.59	0.55	0.62	88	104055	57	8	45	4	72
ASE_00022	RNaseP_bact_b links to Rfam database...	0.49	0.46	0.51	57	82917	58	9	45	4	67
ASE_00023	RNaseP_bact_a links to Rfam database...	0.47	0.47	0.48	60	84129	72	9	57	6	67
ASE_00025	RNaseP_nuc links to Rfam database...	0.29	0.30	0.28	21	78531	108	10	44	54	50
ASE_00026	RNaseP_bact_a links to Rfam database...	0.30	0.30	0.30	33	59575	80	7	70	3	77
ASE_00028	RNaseP_bact_b links to Rfam database...	0.57	0.55	0.59	69	84550	54	9	38	7	57
ASE_00029	RNaseP_bact_a links to Rfam database...	0.50	0.48	0.51	59	82913	56	9	47	0	63
ASE_00030	RNaseP_bact_a links to Rfam database...	0.64	0.61	0.67	89	85359	44	4	39	1	56
ASE_00031	RNaseP_bact_a links to Rfam database...	0.39	0.38	0.39	48	86614	79	9	65	5	78
ASE_00032	RNaseP_bact_a links to Rfam database...	0.49	0.47	0.51	56	80090	62	3	51	8	62
ASE_00033	RNaseP_bact_a links to Rfam database...	0.35	0.34	0.36	41	64867	73	12	60	1	80
ASE_00035	RNaseP_bact_a links to Rfam database...	0.12	0.12	0.13	14	70389	100	12	85	3	104
ASE_00036	RNaseP_bact_a links to Rfam database...	0.60	0.58	0.62	77	75731	50	8	39	3	55
ASE_00037	RNaseP_bact_a links to Rfam database...	0.41	0.39	0.43	43	59240	59	5	52	2	67
ASE_00038	RNaseP_bact_a links to Rfam database...	0.55	0.53	0.57	54	53533	46	4	37	5	47
ASE_00040	RNaseP_bact_a links to Rfam database...	0.45	0.43	0.48	57	78883	69	4	59	6	76
ASE_00041	RNaseP_bact_a links to Rfam database...	0.39	0.36	0.41	39	57536	61	5	50	6	69
ASE_00042	RNaseP_bact_a links to Rfam database...	0.42	0.40	0.45	58	89970	75	6	66	3	87
ASE_00044	RNaseP_bact_a links to Rfam database...	0.78	0.76	0.79	80	54514	26	4	17	5	25
ASE_00046	RNaseP_bact_a links to Rfam database...	0.46	0.44	0.49	45	50311	49	6	41	2	58
ASE_00047	RNaseP_bact_a links to Rfam database...	0.34	0.32	0.36	42	74189	75	3	71	1	88
ASE_00052	RNaseP_bact_a links to Rfam database...	0.38	0.36	0.40	40	61325	65	4	56	5	72
ASE_00053	RNaseP_bact_a links to Rfam database...	0.45	0.44	0.46	59	79274	70	9	59	2	74
ASE_00056	-	0.33	0.33	0.33	24	30804	50	6	42	2	48
ASE_00057	RNaseP_bact_a links to Rfam database...	0.53	0.51	0.55	68	82091	63	8	48	7	66
ASE_00064	RNaseP_bact_a links to Rfam database...	0.35	0.35	0.35	31	45363	66	2	55	9	58
ASE_00066	RNaseP_bact_a links to Rfam database...	0.37	0.35	0.39	45	72276	71	4	65	2	85
ASE_00068	RNaseP_bact_a links to Rfam database...	0.21	0.20	0.22	17	37599	61	6	53	2	68
ASE_00069	RNaseP_bact_a links to Rfam database...	0.56	0.53	0.59	74	82903	54	7	44	3	66
ASE_00074	RNaseP_bact_a links to Rfam database...	0.50	0.49	0.51	58	67783	56	4	51	1	61
ASE_00075	RNaseP_bact_a links to Rfam database...	0.64	0.60	0.68	97	108669	49	5	40	4	65
ASE_00076	RNaseP_bact_a links to Rfam database...	0.57	0.54	0.61	64	68160	45	3	38	4	54
ASE_00077	RNaseP_bact_a links to Rfam database...	0.32	0.30	0.33	26	45072	58	8	44	6	60
ASE_00078	RNaseP_bact_a links to Rfam database...	0.12	0.12	0.12	10	42988	78	4	69	5	73
ASE_00079	RNaseP_bact_a links to Rfam database...	0.50	0.46	0.53	46	55525	43	2	38	3	54
ASE_00080	RNaseP_bact_a links to Rfam database...	0.35	0.33	0.36	41	71518	72	5	67	0	82
ASE_00081	RNaseP_bact_a links to Rfam database...	0.32	0.30	0.35	29	49686	56	3	52	1	68
ASE_00082	RNaseP_bact_a links to Rfam database...	0.45	0.41	0.49	48	70402	60	1	49	10	68
ASE_00083	RNaseP_bact_a links to Rfam database...	0.75	0.71	0.79	78	62382	28	1	20	7	32
ASE_00084	RNaseP_bact_a links to Rfam database...	0.39	0.38	0.40	38	53532	60	6	52	2	61
ASE_00087	RNaseP_bact_a links to Rfam database...	0.58	0.54	0.62	78	88285	48	3	44	1	66
ASE_00089	-	0.39	0.38	0.40	30	31300	46	1	44	1	49
ASE_00090	RNaseP_bact_a links to Rfam database...	0.61	0.61	0.61	62	55510	44	2	37	5	39
ASE_00092	RNaseP_bact_a links to Rfam database...	0.56	0.55	0.56	62	63436	53	9	39	5	51
ASE_00096	RNaseP_bact_a links to Rfam database...	0.35	0.35	0.36	40	63435	73	5	66	2	75
ASE_00099	RNaseP_bact_a links to Rfam database...	0.64	0.63	0.65	75	64505	41	4	36	1	45
ASE_00100	RNaseP_nuc links to Rfam database...	0.24	0.25	0.24	19	82135	112	11	50	51	57
ASE_00102	RNaseP_bact_a links to Rfam database...	0.24	0.23	0.25	38	117705	113	13	99	1	128
ASE_00104	RNaseP_bact_a links to Rfam database...	0.46	0.44	0.48	52	64153	57	3	53	1	67
ASE_00105	RNaseP_bact_a links to Rfam database...	0.47	0.46	0.49	51	64157	59	7	46	6	60
ASE_00107	RNaseP_bact_a links to Rfam database...	0.66	0.64	0.69	81	73036	37	2	34	1	46
ASE_00108	RNaseP_nuc links to Rfam database...	0.40	0.43	0.37	27	46898	73	13	33	27	36
ASE_00111	RNaseP_nuc links to Rfam database...	0.26	0.33	0.20	19	49990	87	31	46	10	38
ASE_00112	RNaseP_bact_a links to Rfam database...	0.60	0.59	0.61	69	75353	51	3	41	7	47
ASE_00115	RNaseP_bact_a links to Rfam database...	0.66	0.63	0.69	64	54522	37	4	25	8	37
ASE_00116	RNaseP_arch links to Rfam database...	0.04	0.05	0.05	3	31562	66	6	55	5	63
ASE_00118	RNaseP_bact_a links to Rfam database...	0.49	0.47	0.51	48	60631	53	2	45	6	54
ASE_00119	RNaseP_bact_a links to Rfam database...	0.86	0.84	0.88	91	62732	15	2	10	3	17
ASE_00120	RNaseP_arch links to Rfam database...	0.58	0.55	0.60	52	46885	34	4	30	0	42
ASE_00121	RNaseP_arch links to Rfam database...	0.43	0.42	0.43	39	45059	57	6	46	5	53
ASE_00122	RNaseP_bact_a links to Rfam database...	0.26	0.25	0.28	22	43286	62	2	55	5	66
ASE_00123	RNaseP_bact_a links to Rfam database...	0.35	0.33	0.37	28	38427	54	0	48	6	57
ASE_00125	RNaseP_bact_a links to Rfam database...	0.51	0.50	0.52	44	39255	42	4	37	1	44
ASE_00126	RNaseP_bact_a links to Rfam database...	0.38	0.37	0.39	30	40393	49	6	41	2	52
ASE_00128	RNaseP_bact_a links to Rfam database...	0.62	0.60	0.65	60	53208	37	6	27	4	40
ASE_00129	RNaseP_bact_a links to Rfam database...	0.64	0.60	0.67	67	62735	34	3	30	1	44
ASE_00131	RNaseP_bact_a links to Rfam database...	0.51	0.48	0.55	41	39265	39	1	33	5	44
ASE_00132	RNaseP_bact_a links to Rfam database...	0.22	0.22	0.23	21	50312	71	11	59	1	74
ASE_00134	RNaseP_bact_a links to Rfam database...	0.42	0.42	0.43	40	50310	59	5	48	6	55
ASE_00135	RNaseP_bact_a links to Rfam database...	0.46	0.46	0.46	50	63082	60	7	51	2	59
ASE_00136	RNaseP_bact_a links to Rfam database...	0.45	0.45	0.45	41	48114	54	8	42	4	51
ASE_00137	RNaseP_bact_a links to Rfam database...	0.37	0.37	0.37	36	48419	62	3	58	1	62
ASE_00138	RNaseP_bact_a links to Rfam database...	0.24	0.23	0.25	19	40395	61	5	51	5	62
ASE_00139	RNaseP_bact_a links to Rfam database...	0.61	0.58	0.64	60	54191	38	2	32	4	44
ASE_00140	RNaseP_bact_a links to Rfam database...	0.64	0.59	0.69	74	70769	34	7	26	1	51
ASE_00142	RNaseP_bact_a links to Rfam database...	0.70	0.66	0.73	81	67050	35	3	27	5	41
ASE_00145	RNaseP_arch links to Rfam database...	0.36	0.35	0.36	39	70018	73	5	63	5	72
ASE_00146	RNaseP_bact_a links to Rfam database...	0.49	0.47	0.52	58	70765	54	8	45	1	66
ASE_00148	RNaseP_arch links to Rfam database...	0.48	0.47	0.50	72	112432	71	10	61	0	82
ASE_00151	RNaseP_bact_a links to Rfam database...	0.41	0.39	0.43	38	51915	56	7	43	6	60
ASE_00153	RNaseP_nuc links to Rfam database...	0.68	0.68	0.67	50	57555	66	2	23	41	23
ASE_00154	RNaseP_arch links to Rfam database...	0.44	0.43	0.45	46	65239	60	4	52	4	61
ASE_00155	RNaseP_arch links to Rfam database...	0.40	0.40	0.41	57	93388	86	10	73	3	85
ASE_00163	RNaseP_bact_a links to Rfam database...	0.29	0.29	0.30	27	53210	73	5	59	9	66
ASE_00165	RNaseP_bact_a links to Rfam database...	0.44	0.43	0.46	43	52882	50	6	44	0	58
ASE_00168	RNaseP_nuc links to Rfam database...	0.18	0.22	0.15	14	60632	96	24	56	16	50
ASE_00169	RNaseP_bact_a links to Rfam database...	0.23	0.22	0.24	24	57192	78	4	71	3	83
ASE_00170	RNaseP_bact_a links to Rfam database...	0.66	0.65	0.67	60	48739	34	6	23	5	33
ASE_00171	RNaseP_bact_a links to Rfam database...	0.46	0.45	0.48	42	48429	45	5	40	0	52
ASE_00172	RNaseP_bact_a links to Rfam database...	0.56	0.54	0.58	57	58897	43	3	39	1	49
ASE_00174	RNaseP_bact_a links to Rfam database...	0.47	0.45	0.49	49	60976	53	4	46	3	60
ASE_00175	RNaseP_bact_a links to Rfam database...	0.24	0.24	0.25	26	59926	86	2	77	7	81
ASE_00176	RNaseP_bact_a links to Rfam database...	0.49	0.46	0.52	51	59932	49	9	39	1	59
ASE_00179	RNaseP_bact_a links to Rfam database...	0.56	0.56	0.56	47	44169	39	7	30	2	37
ASE_00180	RNaseP_bact_a links to Rfam database...	0.55	0.53	0.58	53	51268	40	8	31	1	47
ASE_00181	RNaseP_bact_a links to Rfam database...	0.42	0.42	0.43	44	57527	64	2	57	5	62
ASE_00182	RNaseP_bact_a links to Rfam database...	0.51	0.49	0.54	67	84130	58	4	54	0	69
ASE_00183	RNaseP_bact_a links to Rfam database...	0.55	0.53	0.57	60	61319	49	5	41	3	53
ASE_00184	RNaseP_bact_a links to Rfam database...	0.51	0.50	0.52	51	54516	49	4	44	1	51
ASE_00185	RNaseP_bact_a links to Rfam database...	0.64	0.62	0.66	79	73417	44	5	35	4	49
ASE_00186	RNaseP_bact_a links to Rfam database...	0.62	0.60	0.65	79	78882	47	4	38	5	53
ASE_00187	RNaseP_arch links to Rfam database...	0.33	0.31	0.35	36	68531	71	6	62	3	79
ASE_00189	RNaseP_bact_b links to Rfam database...	0.49	0.48	0.51	49	63094	51	3	44	4	53
ASE_00190	RNaseP_bact_b links to Rfam database...	0.52	0.51	0.53	46	45365	46	7	33	6	44
ASE_00192	RNaseP_bact_b links to Rfam database...	0.40	0.39	0.42	52	84542	78	11	61	6	81
ASE_00194	RNaseP_bact_b links to Rfam database...	0.41	0.40	0.42	48	73423	69	6	59	4	71
ASE_00195	-	0.61	0.61	0.62	81	86189	53	7	43	3	52
ASE_00196	RNaseP_arch links to Rfam database...	0.80	0.79	0.81	59	31553	20	2	12	6	16
ASE_00197	RNaseP_bact_a links to Rfam database...	0.57	0.54	0.60	79	89122	56	5	47	4	66
ASE_00198	RNaseP_bact_a links to Rfam database...	0.56	0.56	0.57	57	52550	43	7	36	0	45
ASE_00203	RNaseP_bact_a links to Rfam database...	0.62	0.61	0.63	59	46572	39	5	29	5	37
ASE_00204	RNaseP_bact_b links to Rfam database...	0.43	0.42	0.45	47	67791	63	7	51	5	65
ASE_00205	RNaseP_arch links to Rfam database...	0.45	0.46	0.44	41	45963	55	8	44	3	49
ASE_00209	RNaseP_arch links to Rfam database...	0.37	0.35	0.39	31	42992	50	4	44	2	57
ASE_00210	RNaseP_arch links to Rfam database...	0.48	0.48	0.49	31	27198	38	3	29	6	34
ASE_00212	RNaseP_bact_a links to Rfam database...	0.58	0.55	0.61	82	93826	57	4	49	4	66
ASE_00213	RNaseP_arch links to Rfam database...	0.60	0.61	0.60	40	27194	28	6	21	1	26
ASE_00214	RNaseP_bact_a links to Rfam database...	0.72	0.71	0.74	73	56181	37	4	22	11	30
ASE_00215	RNaseP_bact_a links to Rfam database...	0.46	0.44	0.47	44	48422	51	4	46	1	55
ASE_00216	RNaseP_bact_a links to Rfam database...	0.71	0.71	0.72	58	39259	23	7	16	0	24
ASE_00217	RNaseP_bact_a links to Rfam database...	0.26	0.24	0.28	22	40391	58	3	54	1	68
ASE_00221	RNaseP_bact_a links to Rfam database...	0.49	0.44	0.55	51	64527	45	1	41	3	66
ASE_00222	RNaseP_arch links to Rfam database...	0.62	0.61	0.63	96	111949	60	4	52	4	61
ASE_00227	RNaseP_bact_a links to Rfam database...	0.52	0.50	0.54	66	78881	56	4	52	0	67
ASE_00228	RNaseP_bact_a links to Rfam database...	0.34	0.34	0.35	29	46887	61	9	46	6	57
ASE_00229	RNaseP_bact_a links to Rfam database...	0.44	0.43	0.46	37	42405	47	5	39	3	50
ASE_00231	RNaseP_bact_a links to Rfam database...	0.62	0.63	0.63	60	47799	37	7	29	1	36
ASE_00232	RNaseP_bact_a links to Rfam database...	0.68	0.68	0.69	57	38420	27	8	18	1	27
ASE_00234	RNaseP_bact_a links to Rfam database...	0.52	0.50	0.55	64	75350	55	4	48	3	65
ASE_00237	RNaseP_nuc links to Rfam database...	0.09	0.11	0.07	6	45672	87	25	50	12	50
ASE_00238	RNaseP_bact_a links to Rfam database...	0.56	0.54	0.57	62	64152	51	3	44	4	52
ASE_00240	RNaseP_bact_a links to Rfam database...	0.04	0.04	0.05	4	46581	84	5	75	4	89
ASE_00241	RNaseP_bact_a links to Rfam database...	0.53	0.52	0.54	45	43873	46	2	36	8	42
ASE_00242	RNaseP_bact_a links to Rfam database...	0.48	0.46	0.50	51	60973	54	3	48	3	61
ASE_00246	RNaseP_nuc links to Rfam database...	0.18	0.21	0.16	14	48118	79	29	44	6	53
ASE_00247	RNaseP_nuc links to Rfam database...	0.40	0.41	0.39	26	54219	80	1	39	40	38
ASE_00248	RNaseP_bact_a links to Rfam database...	0.28	0.27	0.30	31	62378	72	7	65	0	83
ASE_00250	RNaseP_bact_a links to Rfam database...	0.51	0.50	0.52	65	78878	65	11	49	5	66
ASE_00252	RNaseP_bact_a links to Rfam database...	0.41	0.39	0.43	66	115288	91	6	80	5	102
ASE_00254	RNaseP_bact_a links to Rfam database...	0.62	0.61	0.64	50	36778	34	3	25	6	32
ASE_00255	RNaseP_bact_a links to Rfam database...	0.58	0.55	0.61	72	74573	52	4	42	6	58
ASE_00257	RNaseP_bact_a links to Rfam database...	0.53	0.53	0.53	51	50944	49	6	39	4	46
ASE_00259	RNaseP_bact_a links to Rfam database...	0.35	0.33	0.36	40	73043	72	7	63	2	81
ASE_00263	RNaseP_bact_a links to Rfam database...	0.77	0.77	0.77	92	70380	29	6	22	1	28
ASE_00264	RNaseP_nuc links to Rfam database...	0.41	0.41	0.41	41	49040	65	6	54	5	59
ASE_00267	RNaseP_bact_a links to Rfam database...	0.17	0.17	0.17	15	45064	77	8	63	6	73
ASE_00270	RNaseP_bact_a links to Rfam database...	0.62	0.59	0.65	76	72273	41	7	34	0	52
ASE_00274	RNaseP_bact_a links to Rfam database...	0.41	0.41	0.42	42	55512	57	10	47	0	61
ASE_00277	RNaseP_bact_a links to Rfam database...	0.30	0.30	0.31	27	48117	61	8	53	0	64
ASE_00279	RNaseP_bact_a links to Rfam database...	0.30	0.29	0.31	29	53208	64	10	54	0	72
ASE_00280	RNaseP_bact_a links to Rfam database...	0.42	0.42	0.43	41	51907	56	5	50	1	57
ASE_00281	RNaseP_bact_a links to Rfam database...	0.47	0.44	0.49	39	44472	41	1	39	1	49
ASE_00282	RNaseP_bact_a links to Rfam database...	0.55	0.53	0.58	67	77699	54	7	42	5	60
ASE_00283	RNaseP_bact_a links to Rfam database...	0.73	0.72	0.75	77	61673	30	3	23	4	30
ASE_00284	RNaseP_bact_a links to Rfam database...	0.52	0.51	0.52	55	58206	52	7	43	2	53
ASE_00285	RNaseP_bact_a links to Rfam database...	0.50	0.48	0.53	58	68897	54	7	44	3	64
ASE_00286	RNaseP_bact_a links to Rfam database...	0.28	0.28	0.29	26	46574	70	8	57	5	66
ASE_00287	RNaseP_bact_a links to Rfam database...	0.34	0.32	0.36	33	54854	63	5	54	4	70
ASE_00288	RNaseP_bact_a links to Rfam database...	0.36	0.33	0.39	31	45976	53	4	45	4	62
ASE_00289	RNaseP_bact_a links to Rfam database...	0.42	0.40	0.44	63	100883	83	7	72	4	94
ASE_00291	-	0.54	0.53	0.55	50	48425	44	0	41	3	44
ASE_00292	RNaseP_bact_a links to Rfam database...	0.45	0.43	0.48	59	81687	65	5	59	1	79
ASE_00294	RNaseP_bact_a links to Rfam database...	0.38	0.36	0.41	61	114334	89	2	84	3	110
ASE_00295	RNaseP_bact_a links to Rfam database...	0.37	0.35	0.39	46	73803	74	4	67	3	85
ASE_00296	RNaseP_bact_a links to Rfam database...	0.21	0.21	0.22	30	91671	105	6	99	0	115
ASE_00297	RNaseP_bact_a links to Rfam database...	0.54	0.54	0.54	53	52877	48	5	40	3	45
ASE_00298	RNaseP_bact_a links to Rfam database...	0.41	0.39	0.43	44	67425	66	1	58	7	69
ASE_00299	RNaseP_bact_a links to Rfam database...	0.45	0.46	0.45	46	49353	64	7	49	8	54
ASE_00313	RNaseP_nuc links to Rfam database...	0.62	0.62	0.62	55	62392	56	5	29	22	34
ASE_00316	RNaseP_nuc links to Rfam database...	0.58	0.60	0.55	59	107773	85	13	35	37	39
ASE_00318	RNaseP_bact_b links to Rfam database...	0.53	0.53	0.54	62	80086	56	11	41	4	56
ASE_00327	RNaseP_nuc links to Rfam database...	0.71	0.71	0.71	63	57202	43	4	22	17	26
ASE_00328	RNaseP_bact_b links to Rfam database...	0.56	0.54	0.58	60	72668	47	7	36	4	52
ASE_00330	RNaseP_nuc links to Rfam database...	0.55	0.56	0.54	50	56188	56	6	36	14	40
ASE_00332	RNaseP_bact_a links to Rfam database...	0.55	0.54	0.57	74	81680	58	5	51	2	64
ASE_00335	RNaseP_bact_b links to Rfam database...	0.53	0.52	0.55	60	75356	56	10	40	6	56
ASE_00337	RNaseP_nuc links to Rfam database...	0.29	0.31	0.28	22	39262	66	11	45	10	49
ASE_00338	RNaseP_nuc links to Rfam database...	0.35	0.35	0.35	34	66332	80	7	57	16	64
ASE_00339	RNaseP_bact_a links to Rfam database...	0.47	0.46	0.48	55	80086	67	15	44	8	64
ASE_00340	RNaseP_bact_a links to Rfam database...	0.32	0.32	0.32	27	45971	62	10	48	4	58
ASE_00342	RNaseP_bact_a links to Rfam database...	0.55	0.52	0.58	60	62378	47	2	41	4	55
ASE_00343	RNaseP_bact_a links to Rfam database...	0.28	0.29	0.27	33	83312	97	13	78	6	80
ASE_00346	RNaseP_arch links to Rfam database...	0.45	0.44	0.47	43	48113	53	5	44	4	54
ASE_00353	RNaseP_bact_a links to Rfam database...	0.38	0.38	0.38	41	57863	70	3	63	4	66
ASE_00359	RNaseP_arch links to Rfam database...	0.27	0.28	0.27	22	42695	61	8	53	0	58
ASE_00360	RNaseP_arch links to Rfam database...	0.30	0.29	0.30	19	29340	46	10	34	2	46
ASE_00361	RNaseP_bact_a links to Rfam database...	0.47	0.45	0.50	57	75352	61	9	48	4	70
ASE_00362	RNaseP_bact_a links to Rfam database...	0.63	0.62	0.64	56	48117	36	4	28	4	35
ASE_00363	RNaseP_bact_a links to Rfam database...	0.34	0.34	0.34	32	51267	68	4	57	7	62
ASE_00364	RNaseP_bact_a links to Rfam database...	0.44	0.42	0.46	44	54189	58	4	48	6	61
ASE_00366	RNaseP_bact_a links to Rfam database...	0.42	0.42	0.41	41	58554	62	13	45	4	57
ASE_00367	RNaseP_bact_a links to Rfam database...	0.26	0.27	0.26	23	42982	69	8	58	3	63
ASE_00369	RNaseP_bact_a links to Rfam database...	0.65	0.64	0.67	68	55844	38	4	29	5	39
ASE_00370	RNaseP_bact_a links to Rfam database...	0.51	0.50	0.51	42	41823	47	4	36	7	42
ASE_00372	RNaseP_bact_a links to Rfam database...	0.59	0.59	0.58	59	51902	44	8	34	2	41
ASE_00374	RNaseP_bact_a links to Rfam database...	0.19	0.18	0.20	16	44769	65	13	52	0	72
ASE_00375	RNaseP_bact_a links to Rfam database...	0.68	0.64	0.73	70	60282	30	1	25	4	40
ASE_00376	RNaseP_bact_a links to Rfam database...	0.43	0.43	0.44	45	56851	57	3	54	0	60
ASE_00377	RNaseP_bact_a links to Rfam database...	0.68	0.66	0.70	71	57529	36	4	26	6	36
ASE_00379	RNaseP_bact_a links to Rfam database...	0.44	0.43	0.45	38	45971	53	6	41	6	51
ASE_00380	RNaseP_bact_a links to Rfam database...	0.54	0.53	0.56	52	54853	45	7	34	4	47
ASE_00382	RNaseP_bact_a links to Rfam database...	0.42	0.42	0.42	35	41822	52	7	41	4	49
ASE_00383	RNaseP_bact_a links to Rfam database...	0.32	0.31	0.34	33	54517	65	4	61	0	72
ASE_00384	RNaseP_bact_a links to Rfam database...	0.31	0.30	0.31	28	48427	61	3	58	0	64
ASE_00385	RNaseP_bact_a links to Rfam database...	0.24	0.25	0.24	20	41822	64	10	53	1	61
ASE_00386	RNaseP_bact_a links to Rfam database...	0.39	0.39	0.41	37	50312	58	7	47	4	59
ASE_00387	RNaseP_bact_a links to Rfam database...	0.46	0.45	0.47	47	55844	57	5	49	3	57
ASE_00388	RNaseP_bact_a links to Rfam database...	0.33	0.33	0.33	29	45665	65	5	54	6	60
ASE_00390	RNaseP_bact_a links to Rfam database...	0.20	0.19	0.21	16	42119	67	2	58	7	69
ASE_00393	RNaseP_bact_a links to Rfam database...	0.24	0.24	0.26	22	47809	71	4	60	7	71
ASE_00394	RNaseP_bact_a links to Rfam database...	0.56	0.55	0.57	51	46882	39	3	35	1	42
ASE_00395	RNaseP_bact_a links to Rfam database...	0.39	0.39	0.39	33	41532	58	4	47	7	51
ASE_00396	RNaseP_bact_a links to Rfam database...	0.13	0.13	0.14	11	41535	72	4	66	2	72
ASE_00397	RNaseP_bact_a links to Rfam database...	0.52	0.50	0.55	52	54520	47	3	40	4	53
ASE_00398	RNaseP_bact_a links to Rfam database...	0.59	0.56	0.62	58	55851	45	3	33	9	46
ASE_00400	RNaseP_bact_a links to Rfam database...	0.53	0.52	0.53	55	57867	49	4	44	1	51
ASE_00401	RNaseP_bact_a links to Rfam database...	0.58	0.57	0.58	72	76904	52	11	41	0	54
ASE_00402	RNaseP_bact_a links to Rfam database...	0.28	0.27	0.29	23	42408	56	2	53	1	62
ASE_00403	RNaseP_bact_a links to Rfam database...	0.49	0.47	0.51	50	55847	52	3	45	4	57
ASE_00404	RNaseP_bact_a links to Rfam database...	0.24	0.24	0.25	20	42991	65	4	56	5	65
ASE_00406	RNaseP_bact_a links to Rfam database...	0.25	0.24	0.26	23	48739	73	5	61	7	71
ASE_00408	-	0.49	0.49	0.48	35	32312	42	3	35	4	36
ASE_00409	-	0.48	0.48	0.48	40	40958	43	5	38	0	43
ASE_00411	RNaseP_bact_a links to Rfam database...	0.24	0.24	0.24	21	49369	71	5	60	6	68
ASE_00412	RNaseP_bact_a links to Rfam database...	0.57	0.55	0.60	58	58214	42	6	33	3	47
ASE_00413	RNaseP_bact_a links to Rfam database...	0.28	0.30	0.27	24	44462	65	14	51	0	57
ASE_00414	RNaseP_bact_a links to Rfam database...	0.24	0.23	0.25	22	46273	70	5	60	5	73
ASE_00415	RNaseP_bact_a links to Rfam database...	0.41	0.41	0.42	42	54845	61	9	50	2	61
ASE_00416	RNaseP_bact_a links to Rfam database...	0.46	0.45	0.48	57	77301	69	8	55	6	70
ASE_00417	RNaseP_arch links to Rfam database...	0.48	0.48	0.48	48	54515	54	8	44	2	52
ASE_00418	RNaseP_arch links to Rfam database...	0.18	0.19	0.17	14	38699	70	7	61	2	61
ASE_00419	RNaseP_bact_a links to Rfam database...	0.72	0.68	0.76	70	54854	27	3	19	5	33
ASE_00422	RNaseP_bact_a links to Rfam database...	0.71	0.69	0.73	65	46882	30	2	22	6	29
ASE_00423	RNaseP_bact_a links to Rfam database...	0.65	0.65	0.65	71	56844	39	9	29	1	38
ASE_00426	RNaseP_bact_a links to Rfam database...	0.22	0.21	0.22	23	60972	80	7	73	0	85
ASE_00428	RNaseP_bact_a links to Rfam database...	0.53	0.50	0.55	63	76522	55	8	43	4	62
ASE_00429	-	0.45	0.45	0.45	30	28137	38	6	30	2	36
ASE_00430	RNaseP_bact_a links to Rfam database...	0.68	0.66	0.71	64	46881	32	3	23	6	33
ASE_00431	RNaseP_bact_a links to Rfam database...	0.35	0.34	0.38	32	46275	56	5	48	3	63
ASE_00434	RNaseP_bact_b links to Rfam database...	0.50	0.50	0.50	55	68154	64	10	46	8	55
ASE_00437	RNaseP_bact_a links to Rfam database...	0.33	0.32	0.34	43	79274	84	6	78	0	92
ASE_00438	RNaseP_bact_a links to Rfam database...	0.47	0.45	0.49	52	65959	55	5	50	0	64
ASE_00441	RNaseP_bact_a links to Rfam database...	0.82	0.76	0.89	85	64166	20	1	9	10	27
ASE_00447	RNaseP_bact_a links to Rfam database...	0.45	0.43	0.48	50	60273	59	1	54	4	66
ASE_00448	RNaseP_bact_a links to Rfam database...	0.18	0.18	0.18	20	64148	99	6	87	6	92
ASE_00451	RNaseP_bact_a links to Rfam database...	0.42	0.41	0.44	51	70759	66	3	63	0	74
CRW_00002	-	0.32	0.31	0.33	82	408808	203	23	147	33	182
CRW_00004	-	0.47	0.47	0.46	62	154156	105	9	63	33	69
CRW_00005	-	0.52	0.52	0.53	68	137947	87	4	56	27	64
CRW_00007	-	0.21	0.23	0.20	31	144834	131	39	87	5	102
CRW_00009	-	0.51	0.53	0.50	73	137928	97	15	59	23	65
CRW_00010	-	0.52	0.54	0.51	68	102698	81	8	57	16	58
CRW_00011	-	0.63	0.66	0.60	91	118190	69	9	51	9	47
CRW_00012	-	0.18	0.20	0.16	28	146981	148	34	110	4	113
CRW_00013	Intron_gpI links to Rfam database...	0.24	0.25	0.24	29	103617	106	20	74	12	86
CRW_00014	-	0.43	0.44	0.42	54	103612	86	9	65	12	69
CRW_00016	Intron_gpI links to Rfam database...	0.59	0.56	0.61	67	77312	55	6	36	13	53
CRW_00017	-	0.49	0.52	0.47	47	92135	81	13	40	28	44
CRW_00018	-	0.37	0.45	0.31	54	182538	132	48	70	14	67
CRW_00019	-	0.74	0.75	0.73	103	127624	60	8	30	22	34
CRW_00054	SSU_rRNA_bacteria links to Rfam database...	0.57	0.56	0.57	257	1107367	210	22	170	18	199
CRW_00068	SSU_rRNA_bacteria links to Rfam database...	0.57	0.57	0.58	259	1108856	209	20	170	19	198
CRW_00140	SSU_rRNA_bacteria links to Rfam database...	0.49	0.49	0.48	226	1135811	256	30	211	15	237
CRW_00173	SSU_rRNA_bacteria links to Rfam database...	0.38	0.38	0.39	168	1082220	282	31	237	14	277
CRW_00245	SSU_rRNA_bacteria links to Rfam database...	0.53	0.53	0.54	240	1105883	225	26	179	20	213
CRW_00270	SSU_rRNA_bacteria links to Rfam database...	0.49	0.49	0.50	225	1111832	246	27	202	17	230
CRW_00271	SSU_rRNA_bacteria links to Rfam database...	0.69	0.67	0.71	311	1122312	152	21	107	24	151
CRW_00273	SSU_rRNA_bacteria links to Rfam database...	0.41	0.41	0.41	181	1085155	279	39	226	14	265
CRW_00275	SSU_rRNA_bacteria links to Rfam database...	0.65	0.65	0.66	296	1114820	177	28	127	22	161
CRW_00277	SSU_rRNA_bacteria links to Rfam database...	0.44	0.43	0.44	196	1110351	263	35	213	15	257
CRW_00278	SSU_rRNA_bacteria links to Rfam database...	0.41	0.40	0.42	182	1129824	270	20	230	20	268
CRW_00280	SSU_rRNA_bacteria links to Rfam database...	0.67	0.66	0.68	299	1117818	160	18	125	17	154
CRW_00281	SSU_rRNA_bacteria links to Rfam database...	0.60	0.59	0.61	274	1144893	197	27	147	23	190
CRW_00283	SSU_rRNA_bacteria links to Rfam database...	0.38	0.38	0.37	164	1015587	296	41	233	22	268
CRW_00284	SSU_rRNA_bacteria links to Rfam database...	0.51	0.50	0.51	228	1131314	245	27	191	27	228
CRW_00285	SSU_rRNA_bacteria links to Rfam database...	0.68	0.67	0.69	305	1117819	160	25	111	24	153
CRW_00292	SSU_rRNA_bacteria links to Rfam database...	0.33	0.33	0.34	151	1123806	312	48	245	19	310
CRW_00338	-	0.11	0.12	0.10	47	1052969	417	74	336	7	348
CRW_00417	-	0.47	0.46	0.49	121	458154	138	19	109	10	141
CRW_00418	-	0.11	0.11	0.12	28	441094	219	29	179	11	232
CRW_00419	-	0.11	0.11	0.11	28	463922	224	26	190	8	237
CRW_00421	-	0.44	0.44	0.45	116	462946	156	22	119	15	150
CRW_00422	-	0.26	0.25	0.27	66	455293	196	40	136	20	197
CRW_00423	-	0.14	0.15	0.13	28	242337	197	39	152	6	161
CRW_00424	-	0.30	0.31	0.30	113	789017	287	29	237	21	250
CRW_00426	-	0.22	0.22	0.22	58	457187	213	31	170	12	207
CRW_00427	-	0.30	0.30	0.30	78	454321	200	36	146	18	183
CRW_00428	-	0.22	0.22	0.22	56	465839	213	30	170	13	204
CRW_00429	-	0.16	0.17	0.15	39	306679	223	33	185	5	194
CRW_00430	-	0.28	0.27	0.29	73	456241	183	22	154	7	193
CRW_00433	-	0.24	0.24	0.26	62	467785	187	23	158	6	201
CRW_00434	-	0.28	0.27	0.30	71	457208	176	24	143	9	192
CRW_00435	-	0.34	0.33	0.35	87	451479	166	32	127	7	178
CRW_00437	-	0.37	0.37	0.38	95	456241	166	25	129	12	165
CRW_00438	-	0.37	0.35	0.39	94	454341	154	16	130	8	174
CRW_00441	-	0.34	0.32	0.35	85	454341	166	23	132	11	177
CRW_00442	-	0.36	0.36	0.35	95	453360	184	38	135	11	166
CRW_00443	-	0.31	0.30	0.32	79	456243	194	27	141	26	181
CRW_00444	-	0.30	0.30	0.31	78	459108	186	25	150	11	185
CRW_00445	-	0.28	0.27	0.28	72	458149	187	34	148	5	193
CRW_00446	-	0.25	0.25	0.26	66	468741	200	28	161	11	199
CRW_00447	-	0.28	0.28	0.28	72	452417	197	30	157	10	188
CRW_00448	-	0.21	0.21	0.21	55	457190	217	34	167	16	206
CRW_00449	-	0.21	0.20	0.22	51	444861	190	28	156	6	209
CRW_00450	-	0.28	0.27	0.29	72	458156	192	23	152	17	190
CRW_00451	-	0.22	0.22	0.23	57	457196	202	24	169	9	207
CRW_00452	-	0.32	0.31	0.33	81	453380	179	30	137	12	181
CRW_00453	-	0.14	0.13	0.15	35	452439	210	30	172	8	226
CRW_00456	-	0.15	0.14	0.15	38	470689	214	27	181	6	227
CRW_00457	-	0.25	0.24	0.27	63	467791	186	25	149	12	201
CRW_00458	-	0.43	0.43	0.44	113	464872	153	31	114	8	151
CRW_00459	-	0.35	0.34	0.36	89	461993	180	16	143	21	174
CRW_00462	-	0.24	0.23	0.25	61	458160	190	33	149	8	200
CRW_00463	-	0.52	0.50	0.54	126	445807	130	25	82	23	128
CRW_00464	-	0.30	0.29	0.31	77	461995	176	26	143	7	187
CRW_00466	SSU_rRNA_bacteria links to Rfam database...	0.71	0.70	0.71	320	1116316	158	22	107	29	138
CRW_00530	-	0.23	0.25	0.21	67	534774	263	62	192	9	201
CRW_00535	-	0.33	0.35	0.30	116	898086	295	80	188	27	212
CRW_00538	-	0.23	0.25	0.21	76	811810	307	80	209	18	224
CRW_00542	-	0.12	0.14	0.11	45	994333	407	100	277	30	272
CRW_00589	SSU_rRNA_bacteria links to Rfam database...	0.35	0.34	0.36	153	1094035	290	40	232	18	292
CRW_00590	SSU_rRNA_bacteria links to Rfam database...	0.61	0.59	0.64	268	1119334	184	21	133	30	184
CRW_00591	SSU_rRNA_bacteria links to Rfam database...	0.56	0.56	0.56	249	1098461	218	30	163	25	197
CRW_00594	-	0.21	0.23	0.20	89	1028443	369	80	283	6	306
CRW_00596	-	0.23	0.24	0.21	92	1024167	349	55	282	12	294
CRW_00604	-	0.60	0.64	0.55	52	411684	224	14	28	182	29
CRW_00605	-	0.37	0.39	0.35	27	183843	150	17	34	99	43
CRW_00606	-	0.66	0.68	0.64	63	559055	272	9	26	237	29
CRW_00607	-	0.53	0.55	0.52	42	536049	294	8	31	255	35
CRW_00608	-	0.64	0.63	0.64	50	35700	30	6	22	2	29
CRW_00610	Intron_gpI links to Rfam database...	0.46	0.44	0.48	36	36240	39	7	32	0	45
CRW_00611	-	0.80	0.79	0.81	59	31302	17	4	10	3	16
CRW_00612	-	0.22	0.27	0.18	25	270342	207	29	84	94	68
CRW_00613	Intron_gpI links to Rfam database...	0.79	0.74	0.84	58	34911	19	0	11	8	20
CRW_00614	Intron_gpI links to Rfam database...	0.09	0.11	0.08	6	121691	140	26	48	66	51
CRW_00615	-	0.31	0.35	0.26	29	553768	313	24	57	232	53
CRW_00617	-	0.14	0.17	0.12	11	426336	250	28	51	171	53
CRW_00618	Intron_gpI links to Rfam database...	0.20	0.21	0.19	13	56212	77	12	43	22	48
CRW_00619	Intron_gpI links to Rfam database...	0.23	0.26	0.20	19	164932	156	20	54	82	54
CRW_00620	Intron_gpI links to Rfam database...	0.17	0.21	0.14	13	150882	154	25	55	74	50
CRW_00621	Intron_gpI links to Rfam database...	0.17	0.17	0.17	12	153109	150	13	47	90	59
CRW_00623	Intron_gpI links to Rfam database...	0.13	0.14	0.11	12	129686	140	24	73	43	71
CRW_00626	-	0.47	0.54	0.41	56	100890	91	28	51	12	48
CRW_00629	-	0.50	0.52	0.49	63	91250	67	18	47	2	59
CRW_00632	-	0.55	0.55	0.55	71	82900	65	8	49	8	57
CRW_00633	Intron_gpI links to Rfam database...	0.39	0.42	0.38	44	63429	73	15	58	0	62
CRW_00634	Intron_gpI links to Rfam database...	0.25	0.28	0.22	26	64504	92	23	67	2	68
CRW_00635	-	0.38	0.38	0.38	52	109140	92	16	70	6	85
CRW_00636	-	0.48	0.49	0.46	70	114809	89	16	65	8	73
CRW_00637	-	0.47	0.48	0.46	76	133738	95	13	76	6	82
CRW_00639	-	0.50	0.52	0.48	72	126607	82	23	54	5	66
CRW_00641	-	0.36	0.37	0.36	28	39825	58	12	38	8	48
CRW_00642	-	0.43	0.46	0.41	30	47204	58	7	37	14	35
CRW_00643	-	0.38	0.41	0.36	50	123116	107	25	65	17	72
CRW_00645	-	0.81	0.84	0.78	56	35439	25	6	10	9	11
CRW_00646	-	0.50	0.53	0.47	34	34907	45	7	32	6	30
CRW_00648	-	0.27	0.28	0.27	42	137917	119	18	98	3	106
CRW_00649	-	0.60	0.64	0.56	79	204340	131	8	53	70	45
CRW_00650	-	0.33	0.34	0.33	48	112906	101	7	89	5	94
CRW_00651	-	0.25	0.26	0.24	32	99992	106	21	83	2	89
CRW_00652	-	0.57	0.59	0.55	77	132214	90	12	52	26	53
CRW_00653	-	0.66	0.66	0.65	89	94693	55	5	43	7	45
CRW_00654	-	0.83	0.82	0.83	102	78087	26	2	19	5	22
CRW_00655	-	0.67	0.68	0.67	84	89127	48	7	35	6	40
CRW_00656	-	0.37	0.36	0.38	46	90403	78	10	66	2	83
CRW_00657	-	0.79	0.79	0.78	108	105891	35	3	28	4	28
CRW_00658	-	0.34	0.35	0.32	36	74579	79	17	59	3	66
CRW_00659	-	0.30	0.33	0.28	20	32314	59	14	37	8	41
CRW_00660	-	0.54	0.55	0.54	33	22094	31	5	23	3	27
CRW_00661	-	0.00	0.00	0.00	0	24242	68	20	48	0	51
CRW_00662	-	0.41	0.42	0.41	27	28614	48	7	32	9	38
CRW_00663	-	0.00	0.00	0.00	0	26036	71	11	59	1	61
CRW_00664	-	0.19	0.21	0.18	16	53540	83	16	56	11	62
CRW_00665	-	0.00	0.00	0.00	0	23592	63	19	42	2	48
CRW_00666	-	0.37	0.39	0.35	49	96002	94	14	76	4	77
CRW_00668	-	0.31	0.32	0.31	48	163723	122	15	92	15	102
CRW_00669	-	0.30	0.31	0.28	37	97331	97	21	72	4	82
CRW_00670	Intron_gpI links to Rfam database...	0.45	0.47	0.44	56	69999	70	9	61	0	64
CRW_00671	Intron_gpI links to Rfam database...	0.61	0.58	0.64	68	62728	44	7	32	5	49
CRW_00672	Intron_gpI links to Rfam database...	0.76	0.77	0.75	85	72276	39	6	23	10	26
CRW_00673	-	0.70	0.75	0.65	79	100006	60	22	21	17	26
CRW_00674	Intron_gpI links to Rfam database...	0.55	0.55	0.56	68	83314	58	12	42	4	56
CRW_00676	Intron_gpI links to Rfam database...	0.52	0.57	0.47	65	93390	78	24	49	5	50
CRW_00677	-	0.52	0.53	0.51	56	71901	57	12	41	4	49
CRW_00678	-	0.39	0.41	0.36	50	666297	318	15	73	230	71
CRW_00679	-	0.36	0.37	0.35	40	76523	79	13	60	6	67
CRW_00680	-	0.35	0.40	0.30	49	516475	256	34	78	144	73
CRW_00681	-	0.21	0.22	0.19	25	112920	115	20	85	10	87
CRW_00683	-	0.21	0.23	0.19	31	460161	267	33	95	139	104
CRW_00684	-	0.29	0.32	0.27	43	612013	300	32	83	185	92
CRW_00685	-	0.55	0.61	0.50	65	156949	98	21	45	32	41
CRW_00686	-	0.36	0.38	0.35	47	95133	94	11	75	8	78
CRW_00687	-	0.58	0.62	0.54	41	28604	35	5	30	0	25
CRW_00688	-	0.62	0.65	0.59	37	21882	27	10	16	1	20
CRW_00689	-	0.66	0.70	0.62	54	33583	35	11	22	2	23
CRW_00690	-	0.54	0.54	0.54	37	33342	37	6	26	5	32
CRW_00691	-	0.53	0.55	0.51	37	27188	37	4	32	1	30
CRW_00692	Intron_gpI links to Rfam database...	0.39	0.40	0.39	36	68542	75	10	47	18	54
CRW_00693	-	0.58	0.60	0.56	73	89123	65	9	48	8	49
CRW_00694	-	0.61	0.61	0.60	75	85781	55	11	38	6	47
CRW_00699	-	0.58	0.58	0.59	73	91682	58	4	47	7	53
CRW_00700	-	0.54	0.56	0.52	82	180743	98	17	59	22	65
CRW_00702	-	0.24	0.35	0.16	26	357274	237	91	44	102	49
CRW_00703	-	0.23	0.26	0.21	17	40388	72	20	45	7	49
CRW_00704	-	0.82	0.81	0.83	76	386668	201	0	16	185	18
CRW_00706	-	0.48	0.54	0.43	32	695536	339	10	32	297	27
CRW_00710	-	0.57	0.57	0.57	65	1040288	387	11	39	337	49
CRW_00712	-	0.27	0.33	0.22	36	952727	403	48	79	276	72
CRW_00713	-	0.58	0.58	0.58	59	731343	329	4	39	286	42
CRW_00714	-	0.43	0.49	0.38	52	186219	130	20	64	46	55
CRW_00715	-	0.69	0.68	0.70	71	69276	33	2	29	2	33
CRW_00716	-	0.68	0.71	0.66	63	193657	122	7	26	89	26
CRW_00717	-	0.33	0.33	0.34	49	153589	114	19	78	17	99
CRW_00718	-	0.23	0.22	0.23	42	189856	148	10	128	10	149
CRW_00719	-	0.40	0.42	0.38	38	230081	164	14	48	102	53
CRW_00720	-	0.10	0.11	0.09	10	208229	174	12	84	78	81
CRW_00721	-	0.59	0.57	0.61	39	58589	56	3	22	31	29
CRW_00764	-	0.09	0.09	0.09	18	252909	196	38	151	7	178
CRW_00765	-	0.41	0.41	0.40	106	452413	176	25	132	19	151
CRW_00766	-	0.18	0.18	0.18	43	440153	206	27	168	11	197
CRW_00768	-	0.38	0.37	0.38	96	471656	179	22	132	25	163
CRW_00769	-	0.43	0.42	0.44	106	451484	154	27	108	19	146
CRW_00772	SSU_rRNA_bacteria links to Rfam database...	0.19	0.18	0.19	74	945610	325	42	274	9	330
CRW_00773	-	0.47	0.46	0.48	120	451476	149	24	105	20	139
CRW_00774	-	0.18	0.18	0.18	47	488302	225	39	178	8	216
CRW_00775	-	0.19	0.20	0.18	42	314587	215	38	154	23	170
CRW_00777	-	0.25	0.27	0.24	82	719059	279	63	196	20	222
CRW_00778	SSU_rRNA_bacteria links to Rfam database...	0.42	0.41	0.42	159	1201646	291	25	195	71	225
CRW_00779	-	0.28	0.28	0.27	120	1031326	338	33	287	18	302
CRW_00780	-	0.13	0.13	0.13	34	475544	230	36	186	8	221
CRW_00783	-	0.20	0.20	0.20	51	453371	220	26	180	14	208
CRW_00784	-	0.26	0.26	0.27	67	456240	199	26	157	16	195
CRW_00785	-	0.30	0.29	0.30	74	452430	189	23	149	17	179
CRW_00787	-	0.28	0.29	0.28	88	646633	259	39	193	27	218
CRW_00789	SSU_rRNA_bacteria links to Rfam database...	0.51	0.50	0.52	224	1137356	236	32	174	30	223
CRW_00793	-	0.31	0.32	0.31	120	1048689	320	49	218	53	257
CRW_00794	-	0.25	0.25	0.25	62	434530	200	22	164	14	184
CRW_00796	-	0.13	0.13	0.14	30	384783	202	26	164	12	205
CRW_00797	-	0.25	0.26	0.24	89	692885	299	49	230	20	253
CRW_00801	-	0.43	0.44	0.43	109	438263	163	37	107	19	140
CRW_00802	-	0.30	0.30	0.31	75	460078	195	26	141	28	178
CRW_00813	-	0.18	0.23	0.14	31	530751	279	68	115	96	102
CRW_00815	-	0.46	0.48	0.43	76	159720	103	25	74	4	82
CRW_00816	-	0.37	0.40	0.34	52	143765	104	27	72	5	77
CRW_00820	-	0.46	0.48	0.45	69	136350	95	7	77	11	76
CRW_00849	SSU_rRNA_bacteria links to Rfam database...	0.47	0.47	0.47	222	1117790	269	18	230	21	248
CRW_00997	SSU_rRNA_bacteria links to Rfam database...	0.69	0.69	0.69	318	1135820	167	27	113	27	146
CRW_01134	-	0.29	0.29	0.29	123	964928	311	41	263	7	304
CRW_01168	-	0.41	0.41	0.41	168	900747	251	32	206	13	243
CRW_01186	-	0.27	0.27	0.27	105	836184	289	42	240	7	281
CRW_01188	-	0.12	0.12	0.11	48	837445	375	55	317	3	345
CRW_01189	-	0.24	0.24	0.23	95	862232	324	57	257	10	297
CRW_01214	-	0.21	0.21	0.22	85	931905	318	31	274	13	320
CRW_01222	-	0.26	0.25	0.26	101	912892	291	46	237	8	296
CRW_01224	-	0.24	0.24	0.24	94	912883	306	34	265	7	303
CRW_01239	-	0.21	0.21	0.21	81	840064	325	54	257	14	301
CRW_01250	-	0.30	0.30	0.30	114	781500	271	38	223	10	264
CRW_01260	-	0.15	0.15	0.15	59	912890	348	33	294	21	334
CRW_01266	-	0.30	0.30	0.30	115	818176	283	35	234	14	266
CRW_01271	-	0.29	0.30	0.28	115	827136	300	53	237	10	266
CRW_01275	-	0.33	0.33	0.33	144	1082222	305	49	241	15	288
CRW_01283	-	0.39	0.39	0.39	161	963557	267	29	219	19	248
CRW_01314	-	0.28	0.27	0.28	110	937374	293	34	247	12	297
CRW_01343	SSU_rRNA_archaea links to Rfam database...	0.37	0.36	0.38	158	977489	271	43	211	17	276
CRW_01344	-	0.23	0.23	0.23	83	791549	283	43	236	4	283
PDB_00005	Tymo_tRNA-like links to Rfam database...	0.88	0.79	1.00	11	935	0	0	0	0	3
PDB_00018	-	0.21	0.20	0.25	4	1019	12	2	10	0	16
PDB_00020	-	0.42	0.35	0.54	7	767	6	0	6	0	13
PDB_00041	-	0.70	0.50	1.00	6	624	0	0	0	0	6
PDB_00053	-	0.73	0.55	1.00	6	429	0	0	0	0	5
PDB_00056	-	0.93	0.88	1.00	14	616	0	0	0	0	2
PDB_00072	-	0.33	0.35	0.32	73	148015	152	34	118	0	137
PDB_00078	-	0.54	0.52	0.56	60	49662	48	5	43	0	55
PDB_00079	-	0.65	0.63	0.68	90	121638	72	11	32	29	52
PDB_00123	-	-0.01	0.00	0.00	0	4155	31	0	31	0	36
PDB_00124	-	-0.02	0.00	0.00	0	488	8	2	6	0	10
PDB_00128	-	0.80	0.71	0.91	10	485	1	0	1	0	4
PDB_00134	-	0.66	0.63	0.71	5	371	2	0	2	0	3
PDB_00138	-	0.79	0.63	1.00	5	373	0	0	0	0	3
PDB_00209	-	0.68	0.55	0.86	6	554	1	1	0	0	5
PDB_00243	-	0.76	0.58	1.00	7	623	0	0	0	0	5
PDB_00278	-	0.13	0.13	0.13	9	24908	59	5	54	0	63
PDB_00352	-	0.39	0.37	0.44	7	1209	9	0	9	0	12
PDB_00370	-	0.00	0.00	0.00	0	15179	46	13	33	0	25
PDB_00403	-	0.45	0.44	0.45	68	124598	92	18	66	8	85
PDB_00409	-	0.27	0.31	0.23	77	688219	317	88	167	62	168
PDB_00423	-	0.28	0.27	0.29	20	26726	50	5	45	0	54
PDB_00447	-	-0.01	0.00	0.00	0	7110	30	6	24	0	44
PDB_00571	tRNA links to Rfam database...	0.85	0.76	0.95	19	3301	1	1	0	0	6
PDB_00701	-	0.10	0.10	0.10	11	45344	96	10	86	0	98
PDB_00703	SSU_rRNA_bacteria links to Rfam database...	0.65	0.61	0.69	304	1073402	166	18	121	27	191
PDB_00713	-	-0.01	0.00	0.00	0	1998	19	1	17	1	21
PDB_00716	HDV_ribozyme links to Rfam database...	-0.01	0.00	0.00	0	2680	22	0	21	1	23
PDB_00747	-	0.49	0.44	0.56	35	24468	28	2	26	0	45
PDB_00804	-	0.00	0.00	0.00	0	15344	56	10	46	0	50
PDB_00805	-	0.59	0.58	0.60	176	467736	139	17	99	23	126
PDB_00827	Intron_gpI links to Rfam database...	0.69	0.63	0.76	51	26961	18	0	16	2	30
PDB_00828	Purine links to Rfam database...	0.88	0.78	1.00	21	2464	0	0	0	0	6
PDB_00829	Purine links to Rfam database...	0.86	0.75	1.00	18	2260	0	0	0	0	6
PDB_00842	-	0.79	0.63	1.00	5	373	0	0	0	0	3
PDB_00851	-	0.42	0.39	0.47	16	4719	18	4	14	0	25
PDB_00857	-	0.77	0.60	1.00	9	1072	0	0	0	0	6
PDB_00874	-	0.10	0.10	0.13	2	931	13	2	11	0	18
PDB_00886	-	-0.01	0.00	0.00	0	4152	34	0	34	0	40
PDB_00917	-	0.50	0.48	0.52	46	35156	48	5	38	5	49
PDB_00918	-	0.56	0.43	0.75	3	321	1	1	0	0	4
PDB_00919	RNaseP_bact_a links to Rfam database...	0.36	0.33	0.39	34	44165	56	6	48	2	69
PDB_01009	tRNA links to Rfam database...	0.90	0.90	0.90	19	2464	4	0	2	2	2
PDB_01020	Purine links to Rfam database...	0.86	0.74	1.00	17	2261	1	0	0	1	6
PDB_01040	-	0.31	0.30	0.35	6	1111	11	0	11	0	14
PDB_01059	-	0.56	0.43	0.75	3	227	1	1	0	0	4
PDB_01070	-	0.27	0.26	0.29	14	12672	34	0	34	0	40
PDB_01073	SAM links to Rfam database...	0.52	0.47	0.59	16	4344	12	1	10	1	18
PDB_01092	glmS links to Rfam database...	0.68	0.62	0.76	32	10111	12	1	9	2	20
PDB_01129	-	0.30	0.31	0.29	22	35435	58	23	31	4	49
PDB_01157	-	0.28	0.27	0.29	26	49997	63	13	50	0	72
PDB_01166	-	0.43	0.42	0.45	88	181909	116	23	86	7	124
PDB_01194	-	0.44	0.33	0.63	5	488	3	1	2	0	10
PDB_01201	-	0.82	0.68	1.00	15	1113	0	0	0	0	7
PDB_01203	-	0.74	0.68	0.81	13	1160	3	2	1	0	6
PDB_01250	-	0.15	0.15	0.16	6	12053	31	4	27	0	35
PDB_01260	-	0.44	0.36	0.56	9	1814	7	0	7	0	16
PDB_01261	-	0.48	0.45	0.50	152	467726	150	4	146	0	184
PDB_01273	SSU_rRNA_bacteria links to Rfam database...	0.54	0.52	0.56	253	1117806	233	20	181	32	238
PDB_01281	-	-0.03	0.00	0.00	0	366	12	0	12	0	14
PDB_01299	-	-0.01	0.00	0.00	0	894	9	2	7	0	15
PDB_01309	-	-0.01	0.00	0.00	0	9122	58	7	51	0	39
RFA_00597	Telomerase-vert links to Rfam database...	0.23	0.26	0.21	28	97771	118	29	75	14	81
RFA_00598	Telomerase-vert links to Rfam database...	0.35	0.37	0.34	37	84557	94	11	61	22	64
RFA_00599	Telomerase-vert links to Rfam database...	0.69	0.72	0.67	80	101355	60	17	23	20	31
RFA_00600	Telomerase-vert links to Rfam database...	0.26	0.30	0.23	30	120165	121	30	70	21	70
RFA_00601	Telomerase-vert links to Rfam database...	0.51	0.54	0.50	61	99112	81	10	52	19	53
RFA_00602	Telomerase-vert links to Rfam database...	0.50	0.53	0.47	61	101346	90	13	55	22	55
RFA_00632	HDV_ribozyme links to Rfam database...	0.37	0.36	0.38	10	4069	19	0	16	3	18
RFA_00636	HDV_ribozyme links to Rfam database...	0.51	0.50	0.52	14	3978	13	3	10	0	14
RFA_00767	Corona_pk3 links to Rfam database...	0.59	0.56	0.63	10	1875	6	3	3	0	8
RFA_00768	Corona_pk3 links to Rfam database...	0.47	0.44	0.50	8	1875	8	1	7	0	10
RFA_00769	Corona_pk3 links to Rfam database...	0.54	0.56	0.53	10	1934	9	4	5	0	8
RFA_00770	Corona_pk3 links to Rfam database...	-0.01	0.00	0.00	0	2002	17	1	13	3	18
RFA_00773	Corona_pk3 links to Rfam database...	0.59	0.56	0.63	10	1937	6	1	5	0	8
RFA_00779	Corona_pk3 links to Rfam database...	0.59	0.56	0.63	10	1937	6	3	3	0	8
RFA_00808	RydC links to Rfam database...	-0.01	0.00	0.00	0	2000	18	2	14	2	16
RFA_00809	RydC links to Rfam database...	0.40	0.38	0.43	6	2131	8	1	7	0	10
TMR_00007	tmRNA links to Rfam database...	0.33	0.32	0.33	35	61671	74	8	62	4	73
TMR_00008	tmRNA links to Rfam database...	0.44	0.45	0.43	48	65955	71	13	50	8	58
TMR_00010	tmRNA links to Rfam database...	0.24	0.25	0.23	24	57866	86	14	66	6	72
TMR_00012	tmRNA links to Rfam database...	0.39	0.42	0.37	34	64528	74	20	38	16	47
TMR_00014	tmRNA links to Rfam database...	0.57	0.55	0.60	60	68535	48	5	35	8	50
TMR_00017	tmRNA links to Rfam database...	0.49	0.47	0.51	48	67067	52	11	35	6	54
TMR_00018	tmRNA links to Rfam database...	0.58	0.60	0.57	55	64523	47	13	29	5	37
TMR_00028	tmRNA links to Rfam database...	0.20	0.22	0.19	21	62727	88	13	74	1	76
TMR_00030	tmRNA links to Rfam database...	0.20	0.21	0.20	23	75739	96	19	74	3	88
TMR_00034	tmRNA links to Rfam database...	0.61	0.60	0.62	66	59924	47	11	30	6	44
TMR_00035	tmRNA links to Rfam database...	0.36	0.38	0.35	37	67790	77	9	60	8	61
TMR_00036	tmRNA links to Rfam database...	0.57	0.58	0.56	59	90420	75	9	37	29	42
TMR_00038	tmRNA links to Rfam database...	0.18	0.19	0.18	21	71137	101	12	83	6	89
TMR_00042	tmRNA links to Rfam database...	0.32	0.32	0.32	31	62739	68	8	57	3	67
TMR_00046	tmRNA links to Rfam database...	0.42	0.43	0.41	41	62736	64	12	46	6	55
TMR_00047	tmRNA links to Rfam database...	0.29	0.33	0.25	19	48439	72	17	41	14	38
TMR_00048	tmRNA links to Rfam database...	0.13	0.14	0.13	13	64876	98	11	80	7	82
TMR_00049	tmRNA links to Rfam database...	0.35	0.36	0.35	31	63102	70	7	50	13	56
TMR_00051	tmRNA links to Rfam database...	0.53	0.51	0.56	48	65617	56	5	33	18	46
TMR_00055	tmRNA links to Rfam database...	0.49	0.48	0.50	55	78892	60	9	47	4	59
TMR_00057	tmRNA links to Rfam database...	0.14	0.16	0.12	13	73810	104	28	69	7	66
TMR_00061	tmRNA links to Rfam database...	0.21	0.21	0.21	21	59587	85	8	69	8	78
TMR_00062	tmRNA links to Rfam database...	0.62	0.64	0.60	67	78494	58	14	31	13	37
TMR_00064	tmRNA links to Rfam database...	0.25	0.26	0.23	27	76912	90	21	68	1	76
TMR_00065	tmRNA links to Rfam database...	0.37	0.40	0.35	42	76517	79	22	55	2	64
TMR_00067	tmRNA links to Rfam database...	0.30	0.31	0.29	35	82093	87	16	71	0	79
TMR_00073	tmRNA links to Rfam database...	0.18	0.18	0.18	21	65588	94	8	86	0	96
TMR_00076	tmRNA links to Rfam database...	0.43	0.45	0.42	45	70769	67	12	50	5	55
TMR_00080	tmRNA links to Rfam database...	0.25	0.26	0.24	25	70396	79	21	58	0	71
TMR_00081	tmRNA links to Rfam database...	0.25	0.25	0.25	27	67054	80	17	63	0	79
TMR_00082	tmRNA links to Rfam database...	0.22	0.22	0.21	21	67798	83	19	58	6	75
TMR_00083	tmRNA links to Rfam database...	0.39	0.39	0.40	41	68162	70	5	57	8	64
TMR_00092	tmRNA links to Rfam database...	0.56	0.58	0.54	59	67418	57	13	38	6	42
TMR_00093	tmRNA links to Rfam database...	0.49	0.51	0.48	52	64153	59	12	44	3	50
TMR_00096	tmRNA links to Rfam database...	0.38	0.39	0.38	39	64877	72	11	53	8	61
TMR_00101	tmRNA links to Rfam database...	0.44	0.44	0.44	47	64154	66	9	51	6	60
TMR_00102	tmRNA links to Rfam database...	0.27	0.29	0.26	29	64148	85	22	62	1	72
TMR_00103	tmRNA links to Rfam database...	0.61	0.63	0.59	68	64146	48	15	32	1	40
TMR_00104	-	0.06	0.07	0.05	5	66702	97	32	56	9	65
TMR_00106	tmRNA links to Rfam database...	0.33	0.34	0.32	41	89973	89	24	62	3	79
TMR_00109	tmRNA links to Rfam database...	0.22	0.22	0.23	27	88291	99	18	74	7	95
TMR_00111	tmRNA links to Rfam database...	0.36	0.36	0.37	44	90405	84	14	62	8	78
TMR_00116	tmRNA links to Rfam database...	0.68	0.66	0.70	69	64881	43	6	24	13	35
TMR_00117	tmRNA links to Rfam database...	0.56	0.57	0.55	67	80079	59	15	39	5	51
TMR_00118	tmRNA links to Rfam database...	0.14	0.14	0.14	17	81287	108	16	86	6	103
TMR_00119	tmRNA links to Rfam database...	0.49	0.49	0.49	51	71905	59	13	41	5	53
TMR_00123	tmRNA links to Rfam database...	0.60	0.58	0.63	59	66336	40	6	29	5	42
TMR_00124	tmRNA links to Rfam database...	0.38	0.40	0.37	39	70395	74	19	47	8	59
TMR_00125	tmRNA links to Rfam database...	0.19	0.20	0.19	20	64153	90	17	71	2	79
TMR_00127	tmRNA links to Rfam database...	0.48	0.47	0.48	46	62740	55	5	44	6	51
TMR_00128	tmRNA links to Rfam database...	0.23	0.24	0.22	23	60970	88	14	68	6	73
TMR_00131	tmRNA links to Rfam database...	0.27	0.27	0.27	27	64881	80	14	58	8	72
TMR_00135	tmRNA links to Rfam database...	0.33	0.34	0.31	34	62726	77	21	54	2	65
TMR_00136	tmRNA links to Rfam database...	0.15	0.17	0.14	17	74570	104	23	81	0	84
TMR_00137	tmRNA links to Rfam database...	0.26	0.27	0.25	24	60978	77	17	56	4	65
TMR_00139	tmRNA links to Rfam database...	0.06	0.07	0.05	6	62015	111	25	82	4	85
TMR_00140	tmRNA links to Rfam database...	0.27	0.28	0.27	28	73815	92	6	71	15	72
TMR_00142	tmRNA links to Rfam database...	0.45	0.46	0.45	47	70771	69	16	42	11	55
TMR_00143	tmRNA links to Rfam database...	0.47	0.46	0.48	47	64523	60	8	42	10	56
TMR_00144	tmRNA links to Rfam database...	0.27	0.28	0.25	29	74191	88	18	67	3	74
TMR_00146	tmRNA links to Rfam database...	0.79	0.86	0.73	36	32082	43	9	4	30	6
TMR_00150	tmRNA links to Rfam database...	0.78	0.79	0.77	33	43028	51	3	7	41	9
TMR_00152	tmRNA links to Rfam database...	0.24	0.24	0.24	28	81288	100	11	79	10	87
TMR_00155	tmRNA links to Rfam database...	0.54	0.53	0.56	55	61678	52	7	36	9	49
TMR_00156	tmRNA links to Rfam database...	0.19	0.20	0.19	19	60280	84	11	68	5	78
TMR_00158	tmRNA links to Rfam database...	0.44	0.43	0.45	43	60630	58	9	44	5	56
TMR_00159	tmRNA links to Rfam database...	0.31	0.33	0.30	30	62029	80	14	55	11	62
TMR_00160	tmRNA links to Rfam database...	0.25	0.26	0.24	25	64516	79	13	66	0	70
TMR_00164	tmRNA links to Rfam database...	0.42	0.41	0.43	43	66696	64	6	50	8	63
TMR_00165	tmRNA links to Rfam database...	0.32	0.33	0.31	32	61673	80	12	59	9	65
TMR_00166	tmRNA links to Rfam database...	0.16	0.17	0.16	17	61672	90	10	77	3	84
TMR_00168	tmRNA links to Rfam database...	0.72	0.69	0.75	79	60970	30	0	26	4	35
TMR_00173	tmRNA links to Rfam database...	0.29	0.36	0.24	15	42133	75	20	27	28	27
TMR_00179	tmRNA links to Rfam database...	0.18	0.18	0.18	18	67060	91	18	65	8	80
TMR_00180	tmRNA links to Rfam database...	0.63	0.64	0.62	63	67059	50	11	28	11	36
TMR_00182	tmRNA links to Rfam database...	0.40	0.41	0.40	42	66325	68	8	55	5	60
TMR_00183	tmRNA links to Rfam database...	0.17	0.17	0.17	18	63084	93	10	78	5	85
TMR_00184	tmRNA links to Rfam database...	0.40	0.41	0.39	42	63081	69	6	61	2	60
TMR_00193	tmRNA links to Rfam database...	0.26	0.26	0.25	21	59256	70	19	44	7	59
TMR_00194	tmRNA links to Rfam database...	0.26	0.27	0.25	25	62735	78	16	59	3	68
TMR_00196	tmRNA links to Rfam database...	0.30	0.31	0.29	30	60972	73	18	55	0	67
TMR_00199	tmRNA links to Rfam database...	0.52	0.53	0.51	49	62739	54	13	34	7	43
TMR_00200	-	0.34	0.35	0.34	26	41539	60	4	47	9	49
TMR_00204	tmRNA links to Rfam database...	0.42	0.41	0.44	40	60287	60	16	35	9	57
TMR_00207	tmRNA links to Rfam database...	0.30	0.31	0.30	32	72282	83	7	69	7	71
TMR_00223	tmRNA links to Rfam database...	0.38	0.39	0.38	37	64164	64	13	47	4	58
TMR_00224	tmRNA links to Rfam database...	0.39	0.38	0.40	38	64886	62	9	47	6	63
TMR_00226	tmRNA links to Rfam database...	0.25	0.26	0.24	27	69639	90	15	70	5	78
TMR_00227	tmRNA links to Rfam database...	0.33	0.35	0.31	35	70011	82	19	60	3	66
TMR_00228	tmRNA links to Rfam database...	0.29	0.31	0.27	34	88286	95	24	66	5	74
TMR_00234	tmRNA links to Rfam database...	0.31	0.32	0.30	33	58885	80	11	67	2	69
TMR_00238	tmRNA links to Rfam database...	0.23	0.25	0.21	25	84548	99	20	73	6	76
TMR_00239	tmRNA links to Rfam database...	0.48	0.49	0.47	47	61677	54	10	42	2	49
TMR_00240	tmRNA links to Rfam database...	0.22	0.25	0.21	21	63088	84	23	58	3	64
TMR_00246	-	0.46	0.50	0.41	17	78169	106	7	17	82	17
TMR_00248	tmRNA links to Rfam database...	0.12	0.16	0.10	6	54224	99	21	34	44	32
TMR_00257	tmRNA links to Rfam database...	0.51	0.52	0.50	51	67058	57	10	42	5	47
TMR_00259	tmRNA links to Rfam database...	0.33	0.32	0.35	33	67801	69	11	51	7	70
TMR_00261	tmRNA links to Rfam database...	0.57	0.59	0.55	60	66685	53	17	33	3	41
TMR_00262	tmRNA links to Rfam database...	0.54	0.56	0.53	58	74195	58	14	38	6	46
TMR_00271	tmRNA links to Rfam database...	0.32	0.33	0.32	30	64166	73	10	55	8	61
TMR_00274	tmRNA links to Rfam database...	0.30	0.30	0.29	32	66684	84	14	65	5	73
TMR_00278	tmRNA links to Rfam database...	0.50	0.52	0.49	53	67788	65	9	46	10	49
TMR_00279	tmRNA links to Rfam database...	0.57	0.56	0.57	53	68913	50	5	35	10	41
TMR_00280	tmRNA links to Rfam database...	0.55	0.56	0.54	57	65961	63	3	45	15	44
TMR_00283	tmRNA links to Rfam database...	0.37	0.40	0.34	38	65230	76	18	55	3	58
TMR_00289	tmRNA links to Rfam database...	0.56	0.57	0.54	56	67058	58	14	33	11	42
TMR_00290	tmRNA links to Rfam database...	0.54	0.54	0.54	50	64168	49	12	31	6	42
TMR_00296	tmRNA links to Rfam database...	0.49	0.49	0.48	48	68907	62	11	40	11	50
TMR_00298	tmRNA links to Rfam database...	0.39	0.40	0.38	40	68160	71	11	54	6	61
TMR_00300	tmRNA links to Rfam database...	0.66	0.69	0.64	77	70379	47	12	32	3	35
TMR_00301	tmRNA links to Rfam database...	0.22	0.24	0.20	23	82102	90	20	70	0	73
TMR_00302	tmRNA links to Rfam database...	0.26	0.29	0.23	27	77305	98	24	65	9	67
TMR_00305	tmRNA links to Rfam database...	0.47	0.48	0.46	49	60969	57	16	41	0	53
TMR_00306	tmRNA links to Rfam database...	0.24	0.25	0.23	26	64147	88	19	69	0	80
TMR_00310	tmRNA links to Rfam database...	0.57	0.55	0.60	54	63813	48	6	30	12	44
TMR_00317	tmRNA links to Rfam database...	0.55	0.58	0.52	59	68151	58	15	40	3	43
TMR_00331	tmRNA links to Rfam database...	0.30	0.33	0.27	27	66695	84	10	63	11	55
TMR_00332	tmRNA links to Rfam database...	0.31	0.31	0.31	31	67062	76	14	54	8	68
TMR_00334	tmRNA links to Rfam database...	0.43	0.42	0.45	42	66701	61	5	47	9	59
TMR_00337	tmRNA links to Rfam database...	0.12	0.13	0.12	15	82902	111	14	97	0	104
TMR_00340	tmRNA links to Rfam database...	0.47	0.48	0.47	39	64178	66	7	37	22	42
TMR_00341	tmRNA links to Rfam database...	0.20	0.22	0.19	20	63086	90	18	66	6	72
TMR_00343	tmRNA links to Rfam database...	0.39	0.40	0.39	42	64872	66	9	57	0	63
TMR_00345	tmRNA links to Rfam database...	0.54	0.52	0.56	54	63806	50	5	38	7	50
TMR_00346	tmRNA links to Rfam database...	0.48	0.48	0.47	45	64166	59	4	46	9	49
TMR_00348	tmRNA links to Rfam database...	0.14	0.14	0.14	14	77320	104	17	70	17	85
TMR_00352	tmRNA links to Rfam database...	0.23	0.25	0.20	19	95172	114	24	51	39	56
TMR_00353	tmRNA links to Rfam database...	0.52	0.52	0.52	55	84149	64	12	39	13	50
TMR_00357	tmRNA links to Rfam database...	0.50	0.54	0.47	50	82921	72	21	36	15	42
TMR_00358	tmRNA links to Rfam database...	0.42	0.45	0.39	45	74964	76	26	43	7	54
TMR_00361	-	0.36	0.43	0.30	31	93425	89	27	45	17	41
TMR_00366	tmRNA links to Rfam database...	0.28	0.29	0.27	29	67789	85	19	59	7	71
TMR_00372	tmRNA links to Rfam database...	0.52	0.53	0.50	51	70399	64	8	42	14	45
TMR_00374	tmRNA links to Rfam database...	0.12	0.13	0.11	12	81704	112	27	67	18	80
TMR_00375	tmRNA links to Rfam database...	0.44	0.48	0.41	47	73422	72	20	47	5	51
TMR_00376	tmRNA links to Rfam database...	0.49	0.51	0.48	48	74590	71	13	40	18	47
TMR_00378	tmRNA links to Rfam database...	0.33	0.34	0.32	33	67792	78	13	58	7	64
TMR_00383	tmRNA links to Rfam database...	0.18	0.19	0.17	19	66685	93	14	77	2	81
TMR_00384	tmRNA links to Rfam database...	0.51	0.50	0.52	54	65600	54	5	44	5	54
TMR_00393	tmRNA links to Rfam database...	0.65	0.68	0.62	36	53243	57	8	14	35	17
TMR_00395	tmRNA links to Rfam database...	0.36	0.36	0.36	39	64513	70	7	61	2	70
TMR_00398	tmRNA links to Rfam database...	0.36	0.35	0.37	37	65240	68	4	60	4	69
TMR_00399	tmRNA links to Rfam database...	0.18	0.19	0.17	18	64876	88	17	69	2	76
TMR_00404	tmRNA links to Rfam database...	0.20	0.22	0.18	20	67418	93	24	66	3	72
TMR_00408	tmRNA links to Rfam database...	0.39	0.42	0.36	37	65964	74	24	41	9	51
TMR_00409	tmRNA links to Rfam database...	0.54	0.65	0.45	30	68569	87	14	22	51	16
TMR_00411	tmRNA links to Rfam database...	0.18	0.18	0.17	16	60981	91	18	60	13	71
TMR_00415	tmRNA links to Rfam database...	0.65	0.62	0.67	63	67067	35	5	26	4	38
TMR_00419	tmRNA links to Rfam database...	0.18	0.19	0.18	21	81694	101	12	83	6	90
TMR_00422	tmRNA links to Rfam database...	0.27	0.29	0.26	27	67792	87	18	59	10	65
TMR_00423	tmRNA links to Rfam database...	0.17	0.19	0.15	14	63810	94	19	60	15	59
TMR_00427	tmRNA links to Rfam database...	0.16	0.16	0.15	16	67421	96	15	76	5	81
TMR_00429	tmRNA links to Rfam database...	0.39	0.39	0.39	43	74580	78	10	58	10	66
TMR_00430	tmRNA links to Rfam database...	0.21	0.22	0.20	24	82500	100	25	72	3	85
TMR_00431	tmRNA links to Rfam database...	0.64	0.69	0.59	38	51939	56	15	11	30	17
TMR_00432	tmRNA links to Rfam database...	0.21	0.22	0.19	23	79682	102	13	82	7	81
TMR_00433	tmRNA links to Rfam database...	0.45	0.47	0.43	50	80083	68	18	49	1	56
TMR_00439	tmRNA links to Rfam database...	0.29	0.31	0.27	31	68522	86	15	67	4	70
TMR_00441	tmRNA links to Rfam database...	0.12	0.13	0.10	11	62021	99	26	70	3	72
TMR_00443	tmRNA links to Rfam database...	0.41	0.42	0.41	44	67053	72	15	49	8	60
TMR_00448	tmRNA links to Rfam database...	0.49	0.47	0.51	43	62043	50	6	36	8	49
TMR_00451	tmRNA links to Rfam database...	0.26	0.27	0.26	24	63454	75	9	59	7	65
TMR_00457	tmRNA links to Rfam database...	0.35	0.35	0.34	36	78500	78	8	62	8	66
TMR_00458	tmRNA links to Rfam database...	0.10	0.11	0.10	10	63450	94	8	78	8	83
TMR_00460	tmRNA links to Rfam database...	0.38	0.39	0.37	41	79289	76	11	60	5	65
TMR_00465	tmRNA links to Rfam database...	0.26	0.28	0.24	26	64154	81	22	59	0	68
TMR_00469	tmRNA links to Rfam database...	0.41	0.43	0.39	43	64511	66	15	51	0	57
TMR_00472	tmRNA links to Rfam database...	0.30	0.32	0.28	31	64509	82	20	60	2	66
TMR_00478	tmRNA links to Rfam database...	0.21	0.23	0.20	23	71895	95	15	77	3	76
TMR_00498	tmRNA links to Rfam database...	0.17	0.18	0.16	18	68894	100	17	77	6	81
TMR_00499	tmRNA links to Rfam database...	0.35	0.36	0.34	36	64513	78	8	63	7	63
TMR_00501	tmRNA links to Rfam database...	0.43	0.45	0.41	41	62382	63	8	50	5	51
TMR_00502	tmRNA links to Rfam database...	0.21	0.24	0.19	22	75350	98	20	74	4	71
TMR_00503	tmRNA links to Rfam database...	0.39	0.39	0.40	43	67788	73	6	59	8	68
TMR_00519	tmRNA links to Rfam database...	0.13	0.14	0.12	13	63083	94	17	77	0	82
TMR_00520	tmRNA links to Rfam database...	0.23	0.23	0.23	23	63088	87	8	71	8	76
TMR_00522	tmRNA links to Rfam database...	0.07	0.07	0.07	7	63085	104	14	84	6	90
TMR_00528	tmRNA links to Rfam database...	0.26	0.26	0.27	25	63096	77	16	53	8	72
TMR_00540	tmRNA links to Rfam database...	0.36	0.37	0.36	38	73429	70	18	51	1	66
TMR_00541	tmRNA links to Rfam database...	0.48	0.49	0.48	51	61670	65	5	50	10	54
TMR_00544	tmRNA links to Rfam database...	0.47	0.47	0.47	51	89568	71	17	40	14	57
TMR_00547	tmRNA links to Rfam database...	0.44	0.45	0.44	45	65238	58	9	49	0	55
TMR_00553	tmRNA links to Rfam database...	0.38	0.40	0.36	32	48116	57	22	35	0	49
TMR_00559	tmRNA links to Rfam database...	0.44	0.45	0.44	45	62379	62	11	46	5	56
TMR_00560	tmRNA links to Rfam database...	0.50	0.50	0.51	49	60979	54	4	43	7	49
TMR_00562	tmRNA links to Rfam database...	0.43	0.43	0.43	44	72668	66	15	44	7	58
TMR_00563	tmRNA links to Rfam database...	0.26	0.28	0.25	29	75348	93	21	68	4	74
TMR_00566	tmRNA links to Rfam database...	0.23	0.24	0.23	24	60622	84	15	65	4	76
TMR_00568	tmRNA links to Rfam database...	0.36	0.37	0.36	37	60622	72	15	52	5	62
TMR_00570	tmRNA links to Rfam database...	0.50	0.49	0.51	48	60284	54	7	39	8	49
TMR_00571	tmRNA links to Rfam database...	0.50	0.49	0.52	49	60631	55	6	40	9	50
TMR_00576	tmRNA links to Rfam database...	0.45	0.46	0.45	47	60273	65	12	46	7	55
TMR_00579	tmRNA links to Rfam database...	0.20	0.23	0.18	21	80484	101	22	74	5	69
TMR_00580	tmRNA links to Rfam database...	0.27	0.26	0.28	26	60633	75	6	61	8	74
TMR_00581	tmRNA links to Rfam database...	0.29	0.30	0.29	29	62380	78	12	60	6	69
TMR_00584	tmRNA links to Rfam database...	0.55	0.58	0.53	56	60969	53	10	40	3	41
TMR_00586	tmRNA links to Rfam database...	0.27	0.27	0.27	26	60978	76	12	59	5	71
TMR_00587	tmRNA links to Rfam database...	0.74	0.74	0.74	74	61325	31	7	19	5	26
TMR_00588	tmRNA links to Rfam database...	0.28	0.29	0.27	29	77315	87	14	63	10	72
TMR_00594	tmRNA links to Rfam database...	0.35	0.37	0.34	38	79289	76	18	56	2	66
TMR_00596	tmRNA links to Rfam database...	0.22	0.23	0.20	22	78102	92	22	64	6	73
TMR_00599	tmRNA links to Rfam database...	0.20	0.25	0.17	18	63083	90	37	52	1	54
TMR_00600	tmRNA links to Rfam database...	0.40	0.39	0.41	45	79691	67	4	60	3	70
TMR_00601	tmRNA links to Rfam database...	0.14	0.17	0.13	7	58940	96	11	38	47	35
TMR_00603	tmRNA links to Rfam database...	0.55	0.58	0.52	25	60330	84	4	19	61	18
TMR_00604	tmRNA links to Rfam database...	0.65	0.63	0.66	71	62728	40	2	34	4	41
TMR_00605	tmRNA links to Rfam database...	0.37	0.40	0.35	43	74183	82	20	59	3	65
TMR_00606	tmRNA links to Rfam database...	0.51	0.50	0.51	54	68900	60	8	44	8	53
TMR_00609	tmRNA links to Rfam database...	0.63	0.64	0.63	72	63431	43	17	26	0	41
TMR_00610	tmRNA links to Rfam database...	0.54	0.54	0.54	56	62025	58	9	38	11	48
TMR_00611	tmRNA links to Rfam database...	0.64	0.67	0.61	68	61314	47	8	35	4	34
TMR_00612	tmRNA links to Rfam database...	0.46	0.46	0.45	48	60620	62	6	52	4	56
TMR_00614	tmRNA links to Rfam database...	0.30	0.30	0.30	31	60972	78	10	62	6	73
TMR_00615	tmRNA links to Rfam database...	0.55	0.59	0.52	57	63793	56	19	34	3	39
TMR_00616	tmRNA links to Rfam database...	0.42	0.43	0.40	43	67054	70	10	54	6	56
TMR_00617	tmRNA links to Rfam database...	0.30	0.34	0.26	20	34638	61	18	40	3	38
TMR_00623	tmRNA links to Rfam database...	0.39	0.37	0.41	40	61328	64	2	55	7	68
TMR_00624	tmRNA links to Rfam database...	0.58	0.57	0.58	62	62374	51	9	36	6	46
TMR_00625	tmRNA links to Rfam database...	0.23	0.25	0.22	26	78883	98	25	69	4	80
TMR_00626	tmRNA links to Rfam database...	0.45	0.47	0.44	51	67779	69	16	50	3	58
TMR_00680	tmRNA links to Rfam database...	0.24	0.25	0.23	25	67787	89	16	68	5	74
TMR_00681	tmRNA links to Rfam database...	0.62	0.63	0.60	61	65965	50	7	33	10	36
TMR_00683	tmRNA links to Rfam database...	0.11	0.12	0.10	12	82902	120	29	85	6	88
TMR_00686	tmRNA links to Rfam database...	0.31	0.32	0.29	35	71133	96	17	68	11	73
TMR_00687	tmRNA links to Rfam database...	0.35	0.36	0.35	40	71516	76	13	62	1	71
TMR_00696	tmRNA links to Rfam database...	0.55	0.55	0.56	63	84965	68	9	41	18	51
TMR_00698	tmRNA links to Rfam database...	0.32	0.34	0.32	35	63079	76	20	56	0	69
TMR_00699	tmRNA links to Rfam database...	0.45	0.45	0.44	46	67057	58	10	48	0	56
TMR_00702	tmRNA links to Rfam database...	0.32	0.32	0.33	32	67063	70	8	58	4	68
TMR_00703	tmRNA links to Rfam database...	0.41	0.41	0.41	41	67427	62	9	51	2	58
TMR_00706	tmRNA links to Rfam database...	0.49	0.49	0.50	50	66329	55	4	47	4	53
TMR_00711	tmRNA links to Rfam database...	0.55	0.58	0.53	57	67788	57	15	36	6	41
TMR_00712	tmRNA links to Rfam database...	0.12	0.13	0.11	14	78482	112	29	81	2	95
TMR_00716	tmRNA links to Rfam database...	0.12	0.12	0.11	12	62730	101	9	84	8	88

^top

Matthews Correlation Coeffient, Sensitivity and Positive Predictive Value have been calculated based on the paper by Gardener & Giegerich, 2004.

Table of contents:

Overview

Performance plots

Performance of IPknot - scored higher in this pairwise comparison

1. Total counts & total scores for IPknot

2. Individual counts for IPknot [ download as .csv ]

Performance of CRWrnafold - scored lower in this pairwise comparison

1. Total counts & total scores for CRWrnafold

2. Individual counts for CRWrnafold [ download as .csv ]