CompaRNA - on-line benchmarks of RNA structure prediction methods

Laboratory of Structural Bioinformatics @ Adam Mickiewicz University in Poznan

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Overview

Metric	MaxExpect		CRWrnafold
MCC	0.468	>	0.395
Average MCC ± 95% Confidence Intervals	0.502 ± 0.013	>	0.408 ± 0.013
Sensitivity	0.452	>	0.398
Positive Predictive Value	0.485	>	0.394
Total TP	46819	>	41196
Total TN	135227149	>	135219201
Total FP	60776	<	73518
Total FP CONTRA	7992	<	10702
Total FP INCONS	41724	<	52585
Total FP COMP	11060	>	10231
Total FN	56795	<	62418
P-value	3.56938820447e-08

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Performance plots

Comparison of performance of MaxExpect and CRWrnafold. Positive Predictive Value (PPV) is plotted against sensitivity. Each dot represents a single test of each method. See tables below for raw data (individual counts for MaxExpect and CRWrnafold).
Average Matthews Correlation Coefficients (MCC) with 95% confidence intervals (CIs) were plotted for different RNA families, for which at least 3 members were present in the benchmarking dataset. 'n' denotes the number of MCCs used to calculate the average and CI. See tables below for raw data (individual counts for MaxExpect and CRWrnafold).
Comparison of average Matthews Correlation Coefficients (MCCs) for MaxExpect and CRWrnafold. The whiskers correspond to 95% confidence intervals (CIs). 'n' denotes the number of MCCs used to calculate average MCCs and CIs. See tables below for raw data (individual counts for MaxExpect and CRWrnafold).

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Performance of MaxExpect - scored higher in this pairwise comparison

1. Total counts & total scores for MaxExpect

Total Base Pair Counts
Total TP	46819
Total TN	135227149
Total FP	60776
Total FP CONTRA	7992
Total FP INCONS	41724
Total FP COMP	11060
Total FN	56795

Total Scores
MCC	0.468
Average MCC ± 95% Confidence Intervals	0.502 ± 0.013
Sensitivity	0.452
Positive Predictive Value	0.485
Nr of predictions	790

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2. Individual counts for MaxExpect [ download as .csv ]

RNA Chain	Rfam family	MCC	SENS	PPV	TP	TN	FP	FP CONTRA	FP INCONS	FP COMP	FN
ASE_00001	RNaseP_arch links to Rfam database...	0.63	0.61	0.66	46	34121	30	2	22	6	29
ASE_00002	RNaseP_arch links to Rfam database...	0.71	0.67	0.74	49	35445	20	2	15	3	24
ASE_00004	RNaseP_bact_a links to Rfam database...	0.71	0.69	0.74	67	47804	25	9	15	1	30
ASE_00005	RNaseP_bact_a links to Rfam database...	0.66	0.57	0.75	67	57881	28	0	22	6	50
ASE_00006	RNaseP_bact_a links to Rfam database...	0.55	0.55	0.55	51	47494	47	10	31	6	42
ASE_00007	RNaseP_bact_a links to Rfam database...	0.73	0.68	0.79	75	59590	27	0	20	7	35
ASE_00009	RNaseP_arch links to Rfam database...	0.36	0.34	0.38	23	26045	39	4	34	1	44
ASE_00012	RNaseP_bact_a links to Rfam database...	0.50	0.44	0.57	54	73825	45	2	39	4	69
ASE_00014	RNaseP_arch links to Rfam database...	0.42	0.42	0.44	44	54184	65	2	55	8	62
ASE_00017	RNaseP_nuc links to Rfam database...	0.18	0.20	0.16	13	50959	82	24	44	14	51
ASE_00018	RNaseP_bact_a links to Rfam database...	0.54	0.51	0.57	69	80479	55	1	52	2	65
ASE_00020	RNaseP_bact_a links to Rfam database...	0.60	0.57	0.64	72	73807	43	6	35	2	54
ASE_00021	RNaseP_bact_a links to Rfam database...	0.60	0.54	0.68	86	104069	48	4	37	7	74
ASE_00022	RNaseP_bact_b links to Rfam database...	0.49	0.45	0.54	56	82924	54	4	44	6	68
ASE_00023	RNaseP_bact_a links to Rfam database...	0.66	0.65	0.68	82	84134	42	5	34	3	45
ASE_00025	RNaseP_nuc links to Rfam database...	0.28	0.30	0.27	21	78529	108	9	47	52	50
ASE_00026	RNaseP_bact_a links to Rfam database...	0.56	0.52	0.60	57	59590	43	2	36	5	53
ASE_00028	RNaseP_bact_b links to Rfam database...	0.72	0.69	0.76	87	84551	37	5	23	9	39
ASE_00029	RNaseP_bact_a links to Rfam database...	0.60	0.56	0.64	68	82922	40	5	33	2	54
ASE_00030	RNaseP_bact_a links to Rfam database...	0.64	0.60	0.69	87	85365	40	3	36	1	58
ASE_00031	RNaseP_bact_a links to Rfam database...	0.72	0.68	0.76	86	86623	35	1	26	8	40
ASE_00032	RNaseP_bact_a links to Rfam database...	0.56	0.55	0.57	65	80086	55	7	42	6	53
ASE_00033	RNaseP_bact_a links to Rfam database...	0.33	0.30	0.38	36	64885	61	3	56	2	85
ASE_00035	RNaseP_bact_a links to Rfam database...	0.39	0.36	0.42	42	70400	65	4	54	7	76
ASE_00036	RNaseP_bact_a links to Rfam database...	0.51	0.48	0.53	64	75734	60	8	49	3	68
ASE_00037	RNaseP_bact_a links to Rfam database...	0.45	0.40	0.50	44	59252	47	0	44	3	66
ASE_00038	RNaseP_bact_a links to Rfam database...	0.75	0.70	0.81	71	53540	25	2	15	8	30
ASE_00040	RNaseP_bact_a links to Rfam database...	0.53	0.50	0.56	66	78886	58	3	48	7	67
ASE_00041	RNaseP_bact_a links to Rfam database...	0.45	0.42	0.48	45	57536	52	4	45	3	63
ASE_00042	RNaseP_bact_a links to Rfam database...	0.48	0.46	0.52	66	89972	66	2	60	4	79
ASE_00044	RNaseP_bact_a links to Rfam database...	0.74	0.73	0.74	77	54511	32	4	23	5	28
ASE_00046	RNaseP_bact_a links to Rfam database...	0.66	0.57	0.76	59	50325	21	0	19	2	44
ASE_00047	RNaseP_bact_a links to Rfam database...	0.59	0.56	0.61	73	74186	47	2	44	1	57
ASE_00052	RNaseP_bact_a links to Rfam database...	0.59	0.52	0.67	58	61338	35	3	26	6	54
ASE_00053	RNaseP_bact_a links to Rfam database...	0.63	0.59	0.68	79	79284	44	3	35	6	54
ASE_00056	-	0.53	0.44	0.63	32	30825	23	2	17	4	40
ASE_00057	RNaseP_bact_a links to Rfam database...	0.61	0.60	0.61	81	82082	56	8	44	4	53
ASE_00064	RNaseP_bact_a links to Rfam database...	0.39	0.39	0.38	35	45359	64	6	51	7	54
ASE_00066	RNaseP_bact_a links to Rfam database...	0.54	0.52	0.58	67	72274	51	1	48	2	63
ASE_00068	RNaseP_bact_a links to Rfam database...	0.62	0.56	0.69	48	37605	27	2	20	5	37
ASE_00069	RNaseP_bact_a links to Rfam database...	0.66	0.62	0.70	87	82903	41	5	33	3	53
ASE_00074	RNaseP_bact_a links to Rfam database...	0.52	0.51	0.54	61	67782	55	4	49	2	58
ASE_00075	RNaseP_bact_a links to Rfam database...	0.69	0.63	0.75	102	108675	41	2	32	7	60
ASE_00076	RNaseP_bact_a links to Rfam database...	0.51	0.49	0.53	58	68156	54	2	49	3	60
ASE_00077	RNaseP_bact_a links to Rfam database...	0.56	0.53	0.58	46	45071	39	4	29	6	40
ASE_00078	RNaseP_bact_a links to Rfam database...	0.72	0.66	0.79	55	43001	20	1	14	5	28
ASE_00079	RNaseP_bact_a links to Rfam database...	0.54	0.51	0.57	51	55522	39	2	36	1	49
ASE_00080	RNaseP_bact_a links to Rfam database...	0.57	0.54	0.60	66	71521	49	6	38	5	57
ASE_00081	RNaseP_bact_a links to Rfam database...	0.79	0.71	0.87	69	49691	11	1	9	1	28
ASE_00082	RNaseP_bact_a links to Rfam database...	0.80	0.73	0.88	85	70403	25	0	12	13	31
ASE_00083	RNaseP_bact_a links to Rfam database...	0.73	0.68	0.78	75	62385	26	2	19	5	35
ASE_00084	RNaseP_bact_a links to Rfam database...	0.78	0.75	0.82	74	53538	21	1	15	5	25
ASE_00087	RNaseP_bact_a links to Rfam database...	0.70	0.65	0.77	93	88289	34	1	27	6	51
ASE_00089	-	0.49	0.46	0.52	36	31306	37	1	32	4	43
ASE_00090	RNaseP_bact_a links to Rfam database...	0.67	0.67	0.67	68	55509	41	4	30	7	33
ASE_00092	RNaseP_bact_a links to Rfam database...	0.76	0.71	0.81	80	63447	23	3	16	4	33
ASE_00096	RNaseP_bact_a links to Rfam database...	0.47	0.45	0.50	52	63442	53	4	48	1	63
ASE_00099	RNaseP_bact_a links to Rfam database...	0.77	0.70	0.86	84	64522	19	0	14	5	36
ASE_00100	RNaseP_nuc links to Rfam database...	0.32	0.32	0.32	24	82141	105	5	45	55	52
ASE_00102	RNaseP_bact_a links to Rfam database...	0.56	0.51	0.62	85	117718	56	5	47	4	81
ASE_00104	RNaseP_bact_a links to Rfam database...	0.70	0.66	0.76	78	64158	28	2	23	3	41
ASE_00105	RNaseP_bact_a links to Rfam database...	0.44	0.41	0.47	45	64166	58	6	44	8	66
ASE_00107	RNaseP_bact_a links to Rfam database...	0.74	0.69	0.79	88	73041	26	1	23	2	39
ASE_00108	RNaseP_nuc links to Rfam database...	0.49	0.49	0.49	31	46908	62	3	29	30	32
ASE_00111	RNaseP_nuc links to Rfam database...	0.26	0.28	0.25	16	50022	66	11	37	18	41
ASE_00112	RNaseP_bact_a links to Rfam database...	0.74	0.72	0.77	83	75358	33	4	21	8	33
ASE_00115	RNaseP_bact_a links to Rfam database...	0.70	0.68	0.72	69	54519	35	4	23	8	32
ASE_00116	RNaseP_arch links to Rfam database...	0.32	0.30	0.34	20	31567	42	4	35	3	46
ASE_00118	RNaseP_bact_a links to Rfam database...	0.49	0.47	0.51	48	60632	49	3	43	3	54
ASE_00119	RNaseP_bact_a links to Rfam database...	0.82	0.81	0.83	87	62730	20	2	16	2	21
ASE_00120	RNaseP_arch links to Rfam database...	0.59	0.54	0.65	51	46892	30	3	25	2	43
ASE_00121	RNaseP_arch links to Rfam database...	0.25	0.25	0.25	23	45059	70	6	62	2	69
ASE_00122	RNaseP_bact_a links to Rfam database...	0.69	0.64	0.76	56	43291	18	0	18	0	32
ASE_00123	RNaseP_bact_a links to Rfam database...	0.53	0.51	0.56	43	38426	39	2	32	5	42
ASE_00125	RNaseP_bact_a links to Rfam database...	0.72	0.66	0.79	58	39267	23	0	15	8	30
ASE_00126	RNaseP_bact_a links to Rfam database...	0.82	0.80	0.84	66	40391	19	1	12	6	16
ASE_00128	RNaseP_bact_a links to Rfam database...	0.75	0.71	0.80	71	53212	26	1	17	8	29
ASE_00129	RNaseP_bact_a links to Rfam database...	0.72	0.69	0.75	77	62733	30	3	22	5	34
ASE_00131	RNaseP_bact_a links to Rfam database...	0.63	0.59	0.67	50	39265	33	1	24	8	35
ASE_00132	RNaseP_bact_a links to Rfam database...	0.68	0.64	0.72	61	50318	28	4	20	4	34
ASE_00134	RNaseP_bact_a links to Rfam database...	0.40	0.41	0.40	39	50305	62	8	51	3	56
ASE_00135	RNaseP_bact_a links to Rfam database...	0.66	0.63	0.68	69	63089	39	1	31	7	40
ASE_00136	RNaseP_bact_a links to Rfam database...	0.80	0.76	0.83	70	48121	22	0	14	8	22
ASE_00137	RNaseP_bact_a links to Rfam database...	0.65	0.62	0.67	61	48425	35	1	29	5	37
ASE_00138	RNaseP_bact_a links to Rfam database...	0.62	0.59	0.64	48	40395	29	7	20	2	33
ASE_00139	RNaseP_bact_a links to Rfam database...	0.63	0.58	0.69	60	54198	33	0	27	6	44
ASE_00140	RNaseP_bact_a links to Rfam database...	0.69	0.64	0.75	80	70770	29	4	22	3	45
ASE_00142	RNaseP_bact_a links to Rfam database...	0.69	0.65	0.74	79	67054	32	3	25	4	43
ASE_00145	RNaseP_arch links to Rfam database...	0.58	0.57	0.59	63	70018	48	4	40	4	48
ASE_00146	RNaseP_bact_a links to Rfam database...	0.63	0.57	0.69	71	70773	35	1	31	3	53
ASE_00148	RNaseP_arch links to Rfam database...	0.71	0.69	0.72	107	112427	45	3	38	4	47
ASE_00151	RNaseP_bact_a links to Rfam database...	0.71	0.66	0.76	65	51917	27	5	16	6	33
ASE_00153	RNaseP_nuc links to Rfam database...	0.57	0.59	0.54	43	57551	71	8	28	35	30
ASE_00154	RNaseP_arch links to Rfam database...	0.58	0.58	0.58	62	65234	49	4	41	4	45
ASE_00155	RNaseP_arch links to Rfam database...	0.53	0.51	0.54	73	93394	64	10	51	3	69
ASE_00163	RNaseP_bact_a links to Rfam database...	0.32	0.30	0.33	28	53217	64	4	52	8	65
ASE_00165	RNaseP_bact_a links to Rfam database...	0.45	0.45	0.46	45	52878	53	5	47	1	56
ASE_00168	RNaseP_nuc links to Rfam database...	0.18	0.22	0.15	14	60630	98	28	54	16	50
ASE_00169	RNaseP_bact_a links to Rfam database...	0.47	0.40	0.54	43	57212	40	1	35	4	64
ASE_00170	RNaseP_bact_a links to Rfam database...	0.72	0.68	0.77	63	48746	25	2	17	6	30
ASE_00171	RNaseP_bact_a links to Rfam database...	0.72	0.70	0.74	66	48427	24	6	17	1	28
ASE_00172	RNaseP_bact_a links to Rfam database...	0.73	0.69	0.78	73	58902	27	1	20	6	33
ASE_00174	RNaseP_bact_a links to Rfam database...	0.50	0.49	0.51	53	60972	52	8	42	2	56
ASE_00175	RNaseP_bact_a links to Rfam database...	0.70	0.66	0.73	71	59934	32	2	24	6	36
ASE_00176	RNaseP_bact_a links to Rfam database...	0.61	0.55	0.68	61	59941	32	4	25	3	49
ASE_00179	RNaseP_bact_a links to Rfam database...	0.58	0.57	0.59	48	44171	34	5	29	0	36
ASE_00180	RNaseP_bact_a links to Rfam database...	0.70	0.68	0.73	68	51267	30	7	18	5	32
ASE_00181	RNaseP_bact_a links to Rfam database...	0.70	0.64	0.76	68	57540	27	3	19	5	38
ASE_00182	RNaseP_bact_a links to Rfam database...	0.60	0.58	0.61	79	84126	53	5	45	3	57
ASE_00183	RNaseP_bact_a links to Rfam database...	0.71	0.67	0.75	76	61324	31	0	25	6	37
ASE_00184	RNaseP_bact_a links to Rfam database...	0.72	0.71	0.73	72	54516	30	1	26	3	30
ASE_00185	RNaseP_bact_a links to Rfam database...	0.75	0.70	0.81	90	73425	27	1	20	6	38
ASE_00186	RNaseP_bact_a links to Rfam database...	0.67	0.62	0.72	82	78889	39	3	29	7	50
ASE_00187	RNaseP_arch links to Rfam database...	0.40	0.38	0.43	44	68532	66	6	53	7	71
ASE_00189	RNaseP_bact_b links to Rfam database...	0.67	0.65	0.69	66	63095	34	1	28	5	36
ASE_00190	RNaseP_bact_b links to Rfam database...	0.60	0.57	0.63	51	45370	35	3	27	5	39
ASE_00192	RNaseP_bact_b links to Rfam database...	0.51	0.47	0.55	63	84552	57	6	45	6	70
ASE_00194	RNaseP_bact_b links to Rfam database...	0.48	0.45	0.50	54	73428	58	8	46	4	65
ASE_00195	-	0.64	0.59	0.69	78	86207	40	3	32	5	55
ASE_00196	RNaseP_arch links to Rfam database...	0.78	0.77	0.79	58	31553	19	2	13	4	17
ASE_00197	RNaseP_bact_a links to Rfam database...	0.60	0.57	0.64	82	89125	52	2	44	6	63
ASE_00198	RNaseP_bact_a links to Rfam database...	0.84	0.77	0.91	79	52563	14	2	6	6	23
ASE_00203	RNaseP_bact_a links to Rfam database...	0.72	0.70	0.75	67	46576	28	4	18	6	29
ASE_00204	RNaseP_bact_b links to Rfam database...	0.66	0.62	0.70	69	67798	34	6	23	5	43
ASE_00205	RNaseP_arch links to Rfam database...	0.62	0.62	0.62	56	45965	39	7	28	4	34
ASE_00209	RNaseP_arch links to Rfam database...	0.40	0.39	0.43	34	42991	46	5	41	0	54
ASE_00210	RNaseP_arch links to Rfam database...	0.65	0.66	0.64	43	27194	24	6	18	0	22
ASE_00212	RNaseP_bact_a links to Rfam database...	0.61	0.57	0.65	84	93832	50	1	44	5	64
ASE_00213	RNaseP_arch links to Rfam database...	0.72	0.71	0.73	47	27197	20	3	14	3	19
ASE_00214	RNaseP_bact_a links to Rfam database...	0.80	0.78	0.82	80	56182	27	3	15	9	23
ASE_00215	RNaseP_bact_a links to Rfam database...	0.60	0.58	0.63	57	48425	38	5	29	4	42
ASE_00216	RNaseP_bact_a links to Rfam database...	0.55	0.54	0.56	44	39262	35	9	25	1	38
ASE_00217	RNaseP_bact_a links to Rfam database...	0.38	0.34	0.41	31	40395	49	5	39	5	59
ASE_00221	RNaseP_bact_a links to Rfam database...	0.63	0.56	0.71	65	64529	30	1	25	4	52
ASE_00222	RNaseP_arch links to Rfam database...	0.58	0.56	0.60	88	111955	58	4	54	0	69
ASE_00227	RNaseP_bact_a links to Rfam database...	0.56	0.54	0.58	72	78879	52	7	45	0	61
ASE_00228	RNaseP_bact_a links to Rfam database...	0.53	0.53	0.53	46	46885	42	11	29	2	40
ASE_00229	RNaseP_bact_a links to Rfam database...	0.73	0.69	0.78	60	42409	23	1	16	6	27
ASE_00231	RNaseP_bact_a links to Rfam database...	0.62	0.59	0.64	57	47806	35	4	28	3	39
ASE_00232	RNaseP_bact_a links to Rfam database...	0.65	0.65	0.65	55	38419	32	10	19	3	29
ASE_00234	RNaseP_bact_a links to Rfam database...	0.60	0.55	0.66	71	75358	43	2	35	6	58
ASE_00237	RNaseP_nuc links to Rfam database...	0.00	0.00	0.00	0	45677	93	28	48	17	56
ASE_00238	RNaseP_bact_a links to Rfam database...	0.71	0.66	0.77	75	64163	29	2	21	6	39
ASE_00240	RNaseP_bact_a links to Rfam database...	0.68	0.65	0.72	60	46582	29	1	22	6	33
ASE_00241	RNaseP_bact_a links to Rfam database...	0.57	0.54	0.61	47	43879	35	1	29	5	40
ASE_00242	RNaseP_bact_a links to Rfam database...	0.63	0.60	0.67	67	60975	34	1	32	1	45
ASE_00246	RNaseP_nuc links to Rfam database...	0.36	0.37	0.36	25	48135	68	14	31	23	42
ASE_00247	RNaseP_nuc links to Rfam database...	0.62	0.63	0.63	40	54221	65	7	17	41	24
ASE_00248	RNaseP_bact_a links to Rfam database...	0.40	0.36	0.44	41	62388	53	2	50	1	73
ASE_00250	RNaseP_bact_a links to Rfam database...	0.64	0.58	0.70	76	78894	37	0	33	4	55
ASE_00252	RNaseP_bact_a links to Rfam database...	0.60	0.57	0.63	95	115289	64	2	54	8	73
ASE_00254	RNaseP_bact_a links to Rfam database...	0.38	0.35	0.41	29	36786	46	5	36	5	53
ASE_00255	RNaseP_bact_a links to Rfam database...	0.56	0.54	0.59	70	74572	52	4	45	3	60
ASE_00257	RNaseP_bact_a links to Rfam database...	0.58	0.56	0.61	54	50951	41	3	32	6	43
ASE_00259	RNaseP_bact_a links to Rfam database...	0.49	0.42	0.57	51	73063	42	3	36	3	70
ASE_00263	RNaseP_bact_a links to Rfam database...	0.69	0.68	0.71	81	70386	35	3	30	2	39
ASE_00264	RNaseP_nuc links to Rfam database...	0.54	0.51	0.58	51	49053	48	1	36	11	49
ASE_00267	RNaseP_bact_a links to Rfam database...	0.66	0.61	0.70	54	45073	32	1	22	9	34
ASE_00270	RNaseP_bact_a links to Rfam database...	0.81	0.78	0.84	100	72271	24	1	18	5	28
ASE_00274	RNaseP_bact_a links to Rfam database...	0.62	0.57	0.68	59	55524	30	5	23	2	44
ASE_00277	RNaseP_bact_a links to Rfam database...	0.43	0.43	0.42	39	48113	55	9	44	2	52
ASE_00279	RNaseP_bact_a links to Rfam database...	0.49	0.48	0.51	48	53207	48	7	39	2	53
ASE_00280	RNaseP_bact_a links to Rfam database...	0.51	0.49	0.54	48	51914	45	8	33	4	50
ASE_00281	RNaseP_bact_a links to Rfam database...	0.73	0.69	0.76	61	44471	28	0	19	9	27
ASE_00282	RNaseP_bact_a links to Rfam database...	0.44	0.44	0.45	56	77690	69	5	64	0	71
ASE_00283	RNaseP_bact_a links to Rfam database...	0.75	0.72	0.79	77	61678	27	3	18	6	30
ASE_00284	RNaseP_bact_a links to Rfam database...	0.68	0.66	0.71	71	58211	37	4	25	8	37
ASE_00285	RNaseP_bact_a links to Rfam database...	0.80	0.75	0.86	92	68899	25	3	12	10	30
ASE_00286	RNaseP_bact_a links to Rfam database...	0.40	0.38	0.42	35	46581	58	2	47	9	57
ASE_00287	RNaseP_bact_a links to Rfam database...	0.72	0.68	0.76	70	54854	28	2	20	6	33
ASE_00288	RNaseP_bact_a links to Rfam database...	0.32	0.31	0.33	29	45967	62	6	54	2	64
ASE_00289	RNaseP_bact_a links to Rfam database...	0.60	0.54	0.66	85	100897	47	3	40	4	72
ASE_00291	-	0.40	0.40	0.40	38	48422	57	9	47	1	56
ASE_00292	RNaseP_bact_a links to Rfam database...	0.47	0.43	0.52	60	81694	59	1	55	3	78
ASE_00294	RNaseP_bact_a links to Rfam database...	0.73	0.66	0.81	113	114342	31	0	26	5	58
ASE_00295	RNaseP_bact_a links to Rfam database...	0.62	0.54	0.70	71	73819	33	3	27	3	60
ASE_00296	RNaseP_bact_a links to Rfam database...	0.44	0.41	0.47	59	91680	69	7	60	2	86
ASE_00297	RNaseP_bact_a links to Rfam database...	0.75	0.72	0.77	71	52883	24	3	18	3	27
ASE_00298	RNaseP_bact_a links to Rfam database...	0.52	0.50	0.54	56	67425	50	1	46	3	57
ASE_00299	RNaseP_bact_a links to Rfam database...	0.55	0.54	0.57	54	49360	45	3	38	4	46
ASE_00313	RNaseP_nuc links to Rfam database...	0.66	0.67	0.64	60	62387	55	9	25	21	29
ASE_00316	RNaseP_nuc links to Rfam database...	0.57	0.54	0.60	53	107791	74	4	32	38	45
ASE_00318	RNaseP_bact_b links to Rfam database...	0.64	0.63	0.65	74	80087	44	14	25	5	44
ASE_00327	RNaseP_nuc links to Rfam database...	0.79	0.76	0.82	68	57208	34	5	10	19	21
ASE_00328	RNaseP_bact_b links to Rfam database...	0.67	0.63	0.73	70	72675	40	4	22	14	42
ASE_00330	RNaseP_nuc links to Rfam database...	0.64	0.66	0.62	59	56185	51	6	30	15	31
ASE_00332	RNaseP_bact_a links to Rfam database...	0.51	0.49	0.54	68	81683	62	2	57	3	70
ASE_00335	RNaseP_bact_b links to Rfam database...	0.62	0.58	0.66	67	75364	42	6	29	7	49
ASE_00337	RNaseP_nuc links to Rfam database...	0.39	0.41	0.38	29	39263	60	5	43	12	42
ASE_00338	RNaseP_nuc links to Rfam database...	0.68	0.63	0.74	62	66346	38	3	19	16	36
ASE_00339	RNaseP_bact_a links to Rfam database...	0.64	0.59	0.70	70	80100	37	2	28	7	49
ASE_00340	RNaseP_bact_a links to Rfam database...	0.74	0.74	0.73	63	45970	27	7	16	4	22
ASE_00342	RNaseP_bact_a links to Rfam database...	0.62	0.58	0.67	67	62381	34	1	32	1	48
ASE_00343	RNaseP_bact_a links to Rfam database...	0.68	0.68	0.69	77	83324	49	8	27	14	36
ASE_00346	RNaseP_arch links to Rfam database...	0.43	0.41	0.45	40	48117	56	4	44	8	57
ASE_00353	RNaseP_bact_a links to Rfam database...	0.57	0.57	0.58	61	57864	49	4	41	4	46
ASE_00359	RNaseP_arch links to Rfam database...	0.25	0.24	0.26	19	42704	55	5	50	0	61
ASE_00360	RNaseP_arch links to Rfam database...	0.29	0.28	0.31	18	29344	46	9	32	5	47
ASE_00361	RNaseP_bact_a links to Rfam database...	0.54	0.53	0.56	67	75347	55	10	42	3	60
ASE_00362	RNaseP_bact_a links to Rfam database...	0.58	0.58	0.58	53	48114	41	2	36	3	38
ASE_00363	RNaseP_bact_a links to Rfam database...	0.58	0.55	0.60	52	51274	41	2	32	7	42
ASE_00364	RNaseP_bact_a links to Rfam database...	0.74	0.70	0.78	74	54190	29	1	20	8	31
ASE_00366	RNaseP_bact_a links to Rfam database...	0.41	0.42	0.41	41	58553	60	6	53	1	57
ASE_00367	RNaseP_bact_a links to Rfam database...	0.55	0.51	0.59	44	42997	38	1	29	8	42
ASE_00369	RNaseP_bact_a links to Rfam database...	0.63	0.63	0.64	67	55841	39	1	36	2	40
ASE_00370	RNaseP_bact_a links to Rfam database...	0.77	0.73	0.82	61	41831	22	1	12	9	23
ASE_00372	RNaseP_bact_a links to Rfam database...	0.68	0.65	0.71	65	51911	33	5	22	6	35
ASE_00374	RNaseP_bact_a links to Rfam database...	0.72	0.72	0.72	63	44763	26	3	21	2	25
ASE_00375	RNaseP_bact_a links to Rfam database...	0.83	0.78	0.88	86	60280	19	1	11	7	24
ASE_00376	RNaseP_bact_a links to Rfam database...	0.67	0.64	0.71	67	56858	30	1	27	2	38
ASE_00377	RNaseP_bact_a links to Rfam database...	0.73	0.70	0.76	75	57531	30	3	21	6	32
ASE_00379	RNaseP_bact_a links to Rfam database...	0.60	0.56	0.63	50	45977	39	3	26	10	39
ASE_00380	RNaseP_bact_a links to Rfam database...	0.70	0.67	0.74	66	54857	28	6	17	5	33
ASE_00382	RNaseP_bact_a links to Rfam database...	0.67	0.65	0.70	55	41826	29	6	18	5	29
ASE_00383	RNaseP_bact_a links to Rfam database...	0.46	0.42	0.50	44	54527	47	3	41	3	61
ASE_00384	RNaseP_bact_a links to Rfam database...	0.61	0.59	0.63	54	48430	37	2	30	5	38
ASE_00385	RNaseP_bact_a links to Rfam database...	0.51	0.51	0.53	41	41827	41	12	25	4	40
ASE_00386	RNaseP_bact_a links to Rfam database...	0.54	0.51	0.57	49	50317	39	7	30	2	47
ASE_00387	RNaseP_bact_a links to Rfam database...	0.70	0.66	0.73	69	55851	30	1	24	5	35
ASE_00388	RNaseP_bact_a links to Rfam database...	0.61	0.55	0.67	49	45680	34	1	23	10	40
ASE_00390	RNaseP_bact_a links to Rfam database...	0.62	0.60	0.64	51	42115	39	0	29	10	34
ASE_00393	RNaseP_bact_a links to Rfam database...	0.48	0.46	0.51	43	47810	49	2	40	7	50
ASE_00394	RNaseP_bact_a links to Rfam database...	0.78	0.76	0.80	71	46882	23	2	16	5	22
ASE_00395	RNaseP_bact_a links to Rfam database...	0.67	0.65	0.68	55	41535	32	2	24	6	29
ASE_00396	RNaseP_bact_a links to Rfam database...	0.55	0.52	0.58	43	41542	36	2	29	5	40
ASE_00397	RNaseP_bact_a links to Rfam database...	0.58	0.56	0.60	59	54517	43	4	35	4	46
ASE_00398	RNaseP_bact_a links to Rfam database...	0.62	0.58	0.66	60	55854	39	1	30	8	44
ASE_00400	RNaseP_bact_a links to Rfam database...	0.66	0.63	0.70	67	57874	34	1	28	5	39
ASE_00401	RNaseP_bact_a links to Rfam database...	0.65	0.63	0.67	79	76910	40	5	34	1	47
ASE_00402	RNaseP_bact_a links to Rfam database...	0.73	0.68	0.77	58	42411	22	2	15	5	27
ASE_00403	RNaseP_bact_a links to Rfam database...	0.45	0.42	0.47	45	55850	54	1	49	4	62
ASE_00404	RNaseP_bact_a links to Rfam database...	0.53	0.49	0.58	42	42998	39	1	30	8	43
ASE_00406	RNaseP_bact_a links to Rfam database...	0.81	0.76	0.87	71	48746	21	0	11	10	23
ASE_00408	-	0.70	0.72	0.68	51	32310	30	4	20	6	20
ASE_00409	-	0.48	0.46	0.50	38	40965	39	4	34	1	45
ASE_00411	RNaseP_bact_a links to Rfam database...	0.49	0.46	0.52	41	49376	45	5	33	7	48
ASE_00412	RNaseP_bact_a links to Rfam database...	0.49	0.46	0.53	48	58220	47	5	38	4	57
ASE_00413	RNaseP_bact_a links to Rfam database...	0.64	0.65	0.63	53	44467	33	10	21	2	28
ASE_00414	RNaseP_bact_a links to Rfam database...	0.47	0.45	0.49	43	46273	51	2	42	7	52
ASE_00415	RNaseP_bact_a links to Rfam database...	0.66	0.65	0.66	67	54845	36	6	28	2	36
ASE_00416	RNaseP_bact_a links to Rfam database...	0.70	0.67	0.73	85	77304	41	1	31	9	42
ASE_00417	RNaseP_arch links to Rfam database...	0.36	0.37	0.35	37	54510	69	9	59	1	63
ASE_00418	RNaseP_arch links to Rfam database...	0.19	0.20	0.19	15	38702	67	8	56	3	60
ASE_00419	RNaseP_bact_a links to Rfam database...	0.82	0.80	0.85	82	54849	17	5	10	2	21
ASE_00422	RNaseP_bact_a links to Rfam database...	0.78	0.77	0.79	72	46880	26	5	14	7	22
ASE_00423	RNaseP_bact_a links to Rfam database...	0.58	0.58	0.58	63	56845	45	8	37	0	46
ASE_00426	RNaseP_bact_a links to Rfam database...	0.44	0.42	0.46	45	60977	53	2	51	0	63
ASE_00428	RNaseP_bact_a links to Rfam database...	0.78	0.75	0.81	94	76520	29	3	19	7	31
ASE_00429	-	0.55	0.52	0.60	34	28146	32	1	22	9	32
ASE_00430	RNaseP_bact_a links to Rfam database...	0.75	0.74	0.76	72	46876	30	5	18	7	25
ASE_00431	RNaseP_bact_a links to Rfam database...	0.65	0.57	0.74	54	46287	29	1	18	10	41
ASE_00434	RNaseP_bact_b links to Rfam database...	0.61	0.59	0.63	65	68162	46	5	33	8	45
ASE_00437	RNaseP_bact_a links to Rfam database...	0.44	0.41	0.49	55	79288	62	0	58	4	80
ASE_00438	RNaseP_bact_a links to Rfam database...	0.50	0.47	0.52	55	65961	50	2	48	0	61
ASE_00441	RNaseP_bact_a links to Rfam database...	0.79	0.74	0.84	83	64162	21	1	15	5	29
ASE_00447	RNaseP_bact_a links to Rfam database...	0.77	0.72	0.82	83	60277	24	1	17	6	33
ASE_00448	RNaseP_bact_a links to Rfam database...	0.22	0.22	0.22	25	64149	93	7	80	6	87
ASE_00451	RNaseP_bact_a links to Rfam database...	0.64	0.60	0.68	75	70765	41	3	33	5	50
CRW_00002	-	0.63	0.57	0.70	151	408844	107	5	60	42	113
CRW_00004	-	0.64	0.63	0.64	83	154160	75	12	35	28	48
CRW_00005	-	0.62	0.63	0.61	83	137938	73	13	41	19	49
CRW_00007	-	0.47	0.49	0.45	65	144848	85	26	52	7	68
CRW_00009	-	0.54	0.56	0.53	77	137930	91	8	60	23	61
CRW_00010	-	0.79	0.79	0.80	99	102707	40	6	19	15	27
CRW_00011	-	0.66	0.68	0.64	94	118195	65	7	45	13	44
CRW_00012	-	0.53	0.54	0.52	76	147006	83	14	57	12	65
CRW_00013	Intron_gpI links to Rfam database...	0.42	0.37	0.47	43	103648	69	4	45	20	72
CRW_00014	-	0.51	0.50	0.52	61	103623	69	12	44	13	62
CRW_00016	Intron_gpI links to Rfam database...	0.51	0.47	0.57	56	77322	56	6	37	13	64
CRW_00017	-	0.53	0.54	0.52	49	92140	70	16	30	24	42
CRW_00018	-	0.62	0.60	0.64	72	182598	89	7	33	49	49
CRW_00019	-	0.73	0.74	0.73	101	127626	62	4	34	24	36
CRW_00054	SSU_rRNA_bacteria links to Rfam database...	0.43	0.42	0.44	192	1107377	261	23	224	14	264
CRW_00068	SSU_rRNA_bacteria links to Rfam database...	0.44	0.43	0.45	197	1108869	251	32	207	12	260
CRW_00140	SSU_rRNA_bacteria links to Rfam database...	0.43	0.42	0.44	193	1135835	265	20	230	15	270
CRW_00173	SSU_rRNA_bacteria links to Rfam database...	0.26	0.26	0.27	115	1082230	324	28	283	13	330
CRW_00245	SSU_rRNA_bacteria links to Rfam database...	0.42	0.41	0.43	186	1105895	262	25	222	15	267
CRW_00270	SSU_rRNA_bacteria links to Rfam database...	0.54	0.54	0.55	244	1111842	223	23	177	23	211
CRW_00271	SSU_rRNA_bacteria links to Rfam database...	0.33	0.32	0.34	146	1122327	292	34	244	14	316
CRW_00273	SSU_rRNA_bacteria links to Rfam database...	0.42	0.40	0.45	180	1085197	237	27	197	13	266
CRW_00275	SSU_rRNA_bacteria links to Rfam database...	0.61	0.60	0.62	273	1114831	186	26	141	19	184
CRW_00277	SSU_rRNA_bacteria links to Rfam database...	0.35	0.33	0.37	148	1110390	267	37	220	10	305
CRW_00278	SSU_rRNA_bacteria links to Rfam database...	0.39	0.36	0.42	160	1129876	240	22	198	20	290
CRW_00280	SSU_rRNA_bacteria links to Rfam database...	0.36	0.35	0.37	157	1117836	279	37	230	12	296
CRW_00281	SSU_rRNA_bacteria links to Rfam database...	0.59	0.58	0.60	270	1144891	201	25	155	21	194
CRW_00283	SSU_rRNA_bacteria links to Rfam database...	0.35	0.34	0.36	146	1015622	282	41	216	25	286
CRW_00284	SSU_rRNA_bacteria links to Rfam database...	0.38	0.35	0.41	159	1131368	249	21	212	16	297
CRW_00285	SSU_rRNA_bacteria links to Rfam database...	0.56	0.54	0.58	246	1117835	199	26	153	20	212
CRW_00292	SSU_rRNA_bacteria links to Rfam database...	0.35	0.33	0.37	150	1123843	269	39	218	12	311
CRW_00338	-	0.17	0.19	0.16	74	1052974	390	83	295	12	321
CRW_00417	-	0.36	0.34	0.39	88	458179	146	24	112	10	174
CRW_00418	-	0.18	0.16	0.20	42	441120	176	15	153	8	218
CRW_00419	-	0.20	0.17	0.22	46	463957	168	14	149	5	219
CRW_00421	-	0.48	0.45	0.52	119	462976	126	15	93	18	147
CRW_00422	-	0.40	0.39	0.42	102	455291	162	21	121	20	161
CRW_00423	-	0.22	0.20	0.24	37	242401	131	19	99	13	152
CRW_00424	-	0.42	0.39	0.44	142	789075	201	18	161	22	221
CRW_00426	-	0.32	0.31	0.34	83	457199	173	24	140	9	182
CRW_00427	-	0.26	0.24	0.28	62	454361	174	27	131	16	199
CRW_00428	-	0.37	0.35	0.39	91	465860	158	24	120	14	169
CRW_00429	-	0.18	0.16	0.19	38	306736	165	31	131	3	195
CRW_00430	-	0.37	0.30	0.46	79	456317	101	12	82	7	187
CRW_00433	-	0.29	0.24	0.35	64	467846	124	10	108	6	199
CRW_00434	-	0.46	0.42	0.51	111	457227	117	19	89	9	152
CRW_00435	-	0.41	0.37	0.46	97	451515	119	8	105	6	168
CRW_00437	-	0.33	0.27	0.40	70	456316	108	16	88	4	190
CRW_00438	-	0.45	0.41	0.49	111	454354	125	17	99	9	157
CRW_00441	-	0.26	0.21	0.31	56	454399	130	14	112	4	206
CRW_00442	-	0.38	0.35	0.41	92	453401	144	32	103	9	169
CRW_00443	-	0.29	0.25	0.34	65	456299	140	18	108	14	195
CRW_00444	-	0.30	0.29	0.33	75	459131	162	23	132	7	188
CRW_00445	-	0.32	0.29	0.34	78	458175	161	28	122	11	187
CRW_00446	-	0.30	0.28	0.32	74	468762	173	19	141	13	191
CRW_00447	-	0.35	0.33	0.38	86	452448	159	15	127	17	174
CRW_00448	-	0.36	0.31	0.40	82	457243	134	16	105	13	179
CRW_00449	-	0.38	0.35	0.40	91	444871	140	22	112	6	169
CRW_00450	-	0.36	0.31	0.43	80	458217	118	6	100	12	182
CRW_00451	-	0.26	0.25	0.28	65	457212	182	22	147	13	199
CRW_00452	-	0.29	0.26	0.32	67	453421	158	17	123	18	195
CRW_00453	-	0.32	0.30	0.35	78	452450	155	25	123	7	183
CRW_00456	-	0.37	0.32	0.44	84	470743	119	21	87	11	181
CRW_00457	-	0.42	0.39	0.46	103	467805	134	17	103	14	161
CRW_00458	-	0.49	0.46	0.52	122	464894	129	22	92	15	142
CRW_00459	-	0.37	0.34	0.40	90	462015	154	22	114	18	173
CRW_00462	-	0.39	0.33	0.46	86	458215	114	9	93	12	175
CRW_00463	-	0.36	0.35	0.38	88	445809	151	25	118	8	166
CRW_00464	-	0.27	0.24	0.32	63	462041	145	14	123	8	201
CRW_00466	SSU_rRNA_bacteria links to Rfam database...	0.61	0.60	0.62	273	1116325	188	25	142	21	185
CRW_00530	-	0.33	0.34	0.32	90	534810	205	54	141	10	178
CRW_00535	-	0.31	0.31	0.30	102	898131	252	53	184	15	226
CRW_00538	-	0.34	0.30	0.38	91	811934	171	43	107	21	209
CRW_00542	-	0.20	0.21	0.19	65	994419	320	59	212	49	252
CRW_00589	SSU_rRNA_bacteria links to Rfam database...	0.32	0.31	0.34	136	1094057	285	28	239	18	309
CRW_00590	SSU_rRNA_bacteria links to Rfam database...	0.40	0.37	0.43	169	1119363	246	23	201	22	283
CRW_00591	SSU_rRNA_bacteria links to Rfam database...	0.44	0.43	0.44	194	1098463	264	36	210	18	252
CRW_00594	-	0.26	0.27	0.25	107	1028468	350	47	273	30	288
CRW_00596	-	0.22	0.23	0.22	87	1024209	323	42	258	23	299
CRW_00604	-	0.90	0.88	0.93	71	411702	185	1	4	180	10
CRW_00605	-	0.72	0.71	0.74	50	183853	120	1	17	102	20
CRW_00606	-	0.87	0.84	0.90	77	559067	237	0	9	228	15
CRW_00607	-	0.66	0.65	0.67	50	536055	254	9	16	229	27
CRW_00608	-	0.74	0.70	0.79	55	35708	25	0	15	10	24
CRW_00610	Intron_gpI links to Rfam database...	0.46	0.46	0.47	37	36237	41	7	34	0	44
CRW_00611	-	0.69	0.67	0.72	50	31306	27	0	19	8	25
CRW_00612	-	0.64	0.61	0.66	57	270394	174	1	28	145	36
CRW_00613	Intron_gpI links to Rfam database...	0.85	0.82	0.89	64	34908	16	0	8	8	14
CRW_00614	Intron_gpI links to Rfam database...	0.14	0.16	0.12	9	121696	125	18	48	59	48
CRW_00615	-	0.70	0.72	0.68	59	553791	259	11	17	231	23
CRW_00617	-	0.48	0.48	0.48	31	426362	233	10	23	200	33
CRW_00618	Intron_gpI links to Rfam database...	0.19	0.20	0.19	12	56217	69	7	44	18	49
CRW_00619	Intron_gpI links to Rfam database...	0.36	0.37	0.35	27	164947	145	7	44	94	46
CRW_00620	Intron_gpI links to Rfam database...	0.18	0.21	0.15	13	150890	150	18	54	78	50
CRW_00621	Intron_gpI links to Rfam database...	0.38	0.35	0.42	25	153121	125	6	29	90	46
CRW_00623	Intron_gpI links to Rfam database...	0.32	0.29	0.35	24	129727	109	5	39	65	59
CRW_00626	-	0.55	0.59	0.52	61	100907	72	19	38	15	43
CRW_00629	-	0.41	0.41	0.41	50	91256	75	13	59	3	72
CRW_00632	-	0.61	0.59	0.63	76	82907	51	4	41	6	52
CRW_00633	Intron_gpI links to Rfam database...	0.62	0.57	0.67	60	63457	32	8	21	3	46
CRW_00634	Intron_gpI links to Rfam database...	0.48	0.47	0.49	44	64531	49	9	36	4	50
CRW_00635	-	0.38	0.38	0.38	52	109142	93	11	73	9	85
CRW_00636	-	0.47	0.46	0.48	66	114823	76	10	61	5	77
CRW_00637	-	0.42	0.42	0.42	67	133743	102	18	75	9	91
CRW_00639	-	0.63	0.64	0.63	88	126616	58	17	35	6	50
CRW_00641	-	0.72	0.71	0.74	54	39830	24	3	16	5	22
CRW_00642	-	0.52	0.57	0.47	37	47199	50	9	33	8	28
CRW_00643	-	0.39	0.43	0.36	52	123110	99	25	69	5	70
CRW_00645	-	0.81	0.84	0.78	56	35439	25	6	10	9	11
CRW_00646	-	0.54	0.53	0.56	34	34919	33	4	23	6	30
CRW_00648	-	0.57	0.57	0.58	84	137930	71	12	49	10	64
CRW_00649	-	0.76	0.76	0.77	94	204358	108	2	26	80	30
CRW_00650	-	0.54	0.51	0.57	73	112922	61	2	53	6	69
CRW_00651	-	0.46	0.49	0.44	59	99993	78	16	60	2	62
CRW_00652	-	0.45	0.48	0.42	62	132209	102	8	76	18	68
CRW_00653	-	0.89	0.87	0.91	116	94703	14	2	9	3	18
CRW_00654	-	0.68	0.65	0.71	80	78097	38	3	30	5	44
CRW_00655	-	0.75	0.73	0.78	90	89138	31	5	20	6	34
CRW_00656	-	0.59	0.58	0.59	75	90398	58	18	34	6	54
CRW_00657	-	0.76	0.75	0.77	102	105898	38	4	26	8	34
CRW_00658	-	0.48	0.49	0.47	50	74584	62	18	39	5	52
CRW_00659	-	0.50	0.51	0.48	31	32321	42	9	24	9	30
CRW_00660	-	0.51	0.50	0.53	30	22098	27	5	22	0	30
CRW_00661	-	0.07	0.08	0.06	4	24247	61	18	41	2	47
CRW_00662	-	0.39	0.40	0.38	26	28612	49	7	35	7	39
CRW_00663	-	0.00	0.00	0.00	0	26031	76	12	63	1	61
CRW_00664	-	0.20	0.22	0.19	17	53538	75	23	50	2	61
CRW_00665	-	0.11	0.13	0.11	6	23596	58	16	35	7	42
CRW_00666	-	0.51	0.49	0.52	62	96022	67	7	50	10	64
CRW_00668	-	0.49	0.50	0.47	75	163719	99	17	67	15	75
CRW_00669	-	0.40	0.39	0.41	46	97349	68	21	45	2	73
CRW_00670	Intron_gpI links to Rfam database...	0.56	0.58	0.56	69	70001	57	12	43	2	51
CRW_00671	Intron_gpI links to Rfam database...	0.80	0.76	0.85	89	62730	20	1	15	4	28
CRW_00672	Intron_gpI links to Rfam database...	0.78	0.77	0.78	86	72280	32	6	18	8	25
CRW_00673	-	0.60	0.62	0.58	65	100015	60	16	32	12	40
CRW_00674	Intron_gpI links to Rfam database...	0.63	0.61	0.64	76	83318	45	8	34	3	48
CRW_00676	Intron_gpI links to Rfam database...	0.60	0.60	0.60	69	93413	64	12	34	18	46
CRW_00677	-	0.55	0.56	0.54	59	71900	56	12	39	5	46
CRW_00678	-	0.45	0.45	0.44	55	666309	273	12	59	202	66
CRW_00679	-	0.34	0.36	0.33	38	76522	79	14	62	3	69
CRW_00680	-	0.60	0.61	0.60	74	516512	219	10	40	169	48
CRW_00681	-	0.55	0.61	0.50	68	112914	83	25	43	15	44
CRW_00683	-	0.30	0.33	0.27	44	460156	239	29	91	119	91
CRW_00684	-	0.45	0.45	0.46	61	612037	256	19	54	183	74
CRW_00685	-	0.38	0.40	0.37	42	156967	113	13	58	42	64
CRW_00686	-	0.57	0.58	0.57	72	95139	67	7	48	12	53
CRW_00687	-	0.67	0.70	0.65	46	28609	29	8	17	4	20
CRW_00688	-	0.84	0.81	0.87	46	21892	10	0	7	3	11
CRW_00689	-	0.69	0.70	0.68	54	33590	28	10	16	2	23
CRW_00690	-	0.70	0.68	0.72	47	33346	24	4	14	6	22
CRW_00691	-	0.52	0.54	0.51	36	27191	35	2	32	1	31
CRW_00692	Intron_gpI links to Rfam database...	0.33	0.34	0.32	31	68537	80	17	50	13	59
CRW_00693	-	0.55	0.56	0.54	68	89126	69	8	51	10	54
CRW_00694	-	0.69	0.68	0.69	83	85785	47	4	33	10	39
CRW_00699	-	0.63	0.62	0.63	78	91683	47	10	35	2	48
CRW_00700	-	0.69	0.67	0.71	99	180762	74	8	32	34	48
CRW_00702	-	0.70	0.76	0.64	57	357346	172	24	8	140	18
CRW_00703	-	0.60	0.55	0.65	36	40415	27	3	16	8	30
CRW_00704	-	0.87	0.86	0.87	81	386667	187	2	10	175	13
CRW_00706	-	0.55	0.59	0.51	35	695541	326	15	19	292	24
CRW_00710	-	0.63	0.66	0.60	75	1040278	345	22	28	295	39
CRW_00712	-	0.70	0.70	0.69	76	952780	350	4	30	316	32
CRW_00713	-	0.81	0.74	0.88	75	731360	279	2	8	269	26
CRW_00714	-	0.51	0.50	0.51	54	186249	114	10	42	62	53
CRW_00715	-	0.81	0.80	0.81	83	69276	23	7	12	4	21
CRW_00716	-	0.71	0.74	0.69	66	193657	96	7	23	66	23
CRW_00717	-	0.67	0.61	0.73	90	153612	50	7	26	17	58
CRW_00718	-	0.71	0.69	0.72	132	189853	66	2	49	15	59
CRW_00719	-	0.56	0.53	0.59	48	230100	140	8	25	107	43
CRW_00720	-	0.10	0.11	0.10	10	208234	162	8	83	71	81
CRW_00721	-	0.60	0.63	0.57	43	58577	59	10	23	26	25
CRW_00764	-	0.10	0.10	0.10	20	252922	181	34	140	7	176
CRW_00765	-	0.40	0.37	0.43	95	452456	133	23	102	8	162
CRW_00766	-	0.35	0.30	0.40	72	440211	123	11	97	15	168
CRW_00768	-	0.43	0.40	0.46	103	471680	146	13	110	23	156
CRW_00769	-	0.56	0.54	0.59	135	451495	113	22	73	18	117
CRW_00772	SSU_rRNA_bacteria links to Rfam database...	0.22	0.21	0.23	85	945632	297	29	254	14	319
CRW_00773	-	0.52	0.48	0.55	125	451499	119	17	84	18	134
CRW_00774	-	0.35	0.32	0.38	84	488343	157	18	121	18	179
CRW_00775	-	0.13	0.13	0.13	27	314613	183	48	133	2	185
CRW_00777	-	0.38	0.38	0.39	116	719100	221	34	150	37	188
CRW_00778	SSU_rRNA_bacteria links to Rfam database...	0.29	0.29	0.29	112	1201643	316	45	225	46	272
CRW_00779	-	0.27	0.26	0.29	108	1031396	274	32	230	12	314
CRW_00780	-	0.27	0.24	0.30	61	475598	155	14	127	14	194
CRW_00783	-	0.29	0.26	0.32	68	453413	156	11	136	9	191
CRW_00784	-	0.27	0.25	0.30	65	456271	172	27	127	18	197
CRW_00785	-	0.26	0.23	0.30	58	452481	145	20	117	8	195
CRW_00787	-	0.44	0.40	0.47	123	646693	160	13	124	23	183
CRW_00789	SSU_rRNA_bacteria links to Rfam database...	0.37	0.37	0.38	165	1137350	293	39	232	22	282
CRW_00793	-	0.47	0.44	0.49	166	1048740	227	34	136	57	211
CRW_00794	-	0.29	0.28	0.31	68	434558	174	10	142	22	178
CRW_00796	-	0.29	0.27	0.32	64	384801	159	15	123	21	171
CRW_00797	-	0.39	0.38	0.41	130	692935	213	23	165	25	212
CRW_00801	-	0.39	0.36	0.42	90	438301	137	25	100	12	159
CRW_00802	-	0.20	0.18	0.22	45	460113	173	20	142	11	208
CRW_00813	-	0.28	0.31	0.26	41	530808	255	40	76	139	92
CRW_00815	-	0.72	0.72	0.73	113	159740	54	11	31	12	45
CRW_00816	-	0.40	0.41	0.39	53	143779	104	9	75	20	76
CRW_00820	-	0.70	0.67	0.73	97	136371	57	2	33	22	48
CRW_00849	SSU_rRNA_bacteria links to Rfam database...	0.58	0.58	0.59	271	1117802	215	14	173	28	199
CRW_00997	SSU_rRNA_bacteria links to Rfam database...	0.44	0.42	0.45	197	1135837	260	32	212	16	267
CRW_01134	-	0.37	0.35	0.40	148	964986	231	28	193	10	279
CRW_01168	-	0.39	0.38	0.39	156	900758	258	36	203	19	255
CRW_01186	-	0.29	0.28	0.30	108	836211	262	31	221	10	278
CRW_01188	-	0.17	0.17	0.17	67	837468	337	52	278	7	326
CRW_01189	-	0.21	0.20	0.22	80	862278	296	42	241	13	312
CRW_01214	-	0.26	0.24	0.28	96	931948	260	36	215	9	309
CRW_01222	-	0.24	0.24	0.24	96	912884	300	60	236	4	301
CRW_01224	-	0.36	0.34	0.37	134	912918	235	31	193	11	263
CRW_01239	-	0.26	0.26	0.27	98	840090	286	37	231	18	284
CRW_01250	-	0.34	0.31	0.38	118	781561	210	24	172	14	260
CRW_01260	-	0.16	0.15	0.17	60	912929	292	42	245	5	333
CRW_01266	-	0.26	0.27	0.26	101	818174	296	45	240	11	280
CRW_01271	-	0.36	0.36	0.36	137	827165	249	36	203	10	244
CRW_01275	-	0.39	0.38	0.40	164	1082246	265	39	207	19	268
CRW_01283	-	0.26	0.24	0.28	99	963611	268	33	223	12	310
CRW_01314	-	0.30	0.29	0.32	116	937404	259	31	214	14	291
CRW_01343	SSU_rRNA_archaea links to Rfam database...	0.37	0.35	0.38	154	977498	261	31	218	12	280
CRW_01344	-	0.31	0.29	0.33	106	791590	228	33	182	13	260
PDB_00005	Tymo_tRNA-like links to Rfam database...	0.88	0.79	1.00	11	935	0	0	0	0	3
PDB_00018	-	0.20	0.20	0.22	4	1017	14	2	12	0	16
PDB_00020	-	0.38	0.35	0.44	7	764	9	0	9	0	13
PDB_00041	-	0.70	0.50	1.00	6	624	0	0	0	0	6
PDB_00053	-	0.73	0.55	1.00	6	429	0	0	0	0	5
PDB_00056	-	0.93	0.88	1.00	14	616	0	0	0	0	2
PDB_00072	-	0.57	0.58	0.56	121	148025	94	10	84	0	89
PDB_00078	-	0.71	0.68	0.74	78	49665	27	5	22	0	37
PDB_00079	-	0.51	0.49	0.53	69	121641	84	10	51	23	73
PDB_00123	-	-0.01	0.00	0.00	0	4151	35	0	35	0	36
PDB_00124	-	-0.02	0.00	0.00	0	488	8	2	6	0	10
PDB_00128	-	0.80	0.71	0.91	10	485	1	0	1	0	4
PDB_00134	-	0.79	0.63	1.00	5	373	0	0	0	0	3
PDB_00138	-	0.79	0.63	1.00	5	373	0	0	0	0	3
PDB_00209	-	0.56	0.45	0.71	5	554	2	0	2	0	6
PDB_00243	-	0.63	0.58	0.70	7	620	3	0	3	0	5
PDB_00278	-	0.10	0.10	0.11	7	24912	57	2	55	0	65
PDB_00352	-	0.83	0.74	0.93	14	1210	1	0	1	0	5
PDB_00370	-	0.09	0.12	0.07	3	15182	40	10	30	0	22
PDB_00403	-	0.53	0.50	0.56	77	124612	70	13	48	9	76
PDB_00409	-	0.32	0.37	0.27	91	688216	320	75	169	76	154
PDB_00423	-	0.23	0.23	0.23	17	26723	56	6	50	0	57
PDB_00447	-	0.27	0.25	0.31	11	7104	25	6	19	0	33
PDB_00571	tRNA links to Rfam database...	0.42	0.36	0.50	9	3303	9	2	7	0	16
PDB_00701	-	0.10	0.10	0.10	11	45344	96	9	87	0	98
PDB_00703	SSU_rRNA_bacteria links to Rfam database...	0.57	0.52	0.62	259	1073427	187	20	139	28	236
PDB_00713	-	0.43	0.43	0.45	9	1996	11	0	11	0	12
PDB_00716	HDV_ribozyme links to Rfam database...	-0.01	0.00	0.00	0	2678	24	1	22	1	23
PDB_00747	-	0.76	0.66	0.88	53	24471	8	1	6	1	27
PDB_00804	-	0.31	0.32	0.31	16	15348	38	6	30	2	34
PDB_00805	-	0.62	0.59	0.65	178	467755	124	14	81	29	124
PDB_00827	Intron_gpI links to Rfam database...	0.77	0.65	0.91	53	26970	7	0	5	2	28
PDB_00828	Purine links to Rfam database...	0.88	0.78	1.00	21	2464	0	0	0	0	6
PDB_00829	Purine links to Rfam database...	0.86	0.75	1.00	18	2260	0	0	0	0	6
PDB_00842	-	0.79	0.63	1.00	5	373	0	0	0	0	3
PDB_00851	-	0.45	0.39	0.53	16	4723	14	0	14	0	25
PDB_00857	-	0.67	0.60	0.75	9	1069	3	0	3	0	6
PDB_00874	-	0.10	0.10	0.13	2	930	14	2	12	0	18
PDB_00886	-	-0.01	0.00	0.00	0	4148	38	0	38	0	40
PDB_00917	-	0.49	0.46	0.52	44	35161	47	3	37	7	51
PDB_00918	-	0.75	0.57	1.00	4	321	0	0	0	0	3
PDB_00919	RNaseP_bact_a links to Rfam database...	0.53	0.48	0.58	49	44169	39	3	32	4	54
PDB_01009	tRNA links to Rfam database...	0.51	0.57	0.46	12	2459	14	5	9	0	9
PDB_01020	Purine links to Rfam database...	0.86	0.74	1.00	17	2261	1	0	0	1	6
PDB_01040	-	0.30	0.30	0.32	6	1109	13	0	13	0	14
PDB_01059	-	0.75	0.57	1.00	4	227	0	0	0	0	3
PDB_01070	-	0.35	0.30	0.41	16	12681	23	0	23	0	38
PDB_01073	SAM links to Rfam database...	0.86	0.74	1.00	25	4346	1	0	0	1	9
PDB_01092	glmS links to Rfam database...	0.75	0.63	0.89	33	10116	6	0	4	2	19
PDB_01129	-	0.42	0.44	0.40	31	35433	51	21	26	4	40
PDB_01157	-	0.33	0.31	0.35	30	50001	55	9	46	0	68
PDB_01166	-	0.54	0.50	0.57	107	181918	87	18	63	6	105
PDB_01194	-	0.77	0.60	1.00	9	487	0	0	0	0	6
PDB_01201	-	0.82	0.68	1.00	15	1113	0	0	0	0	7
PDB_01203	-	0.71	0.63	0.80	12	1161	3	2	1	0	7
PDB_01250	-	0.13	0.12	0.15	5	12057	28	3	25	0	36
PDB_01260	-	0.64	0.48	0.86	12	1816	2	0	2	0	13
PDB_01261	-	0.74	0.65	0.85	218	467773	41	0	37	4	118
PDB_01273	SSU_rRNA_bacteria links to Rfam database...	0.45	0.43	0.46	211	1117804	273	31	214	28	280
PDB_01281	-	-0.03	0.00	0.00	0	366	12	0	12	0	14
PDB_01299	-	0.74	0.67	0.83	10	891	2	1	1	0	5
PDB_01309	-	-0.01	0.00	0.00	0	9118	62	9	53	0	39
RFA_00597	Telomerase-vert links to Rfam database...	0.24	0.26	0.23	28	97782	106	20	73	13	81
RFA_00598	Telomerase-vert links to Rfam database...	0.66	0.63	0.68	64	84572	59	3	27	29	37
RFA_00599	Telomerase-vert links to Rfam database...	0.72	0.72	0.71	80	101363	56	10	22	24	31
RFA_00600	Telomerase-vert links to Rfam database...	0.62	0.69	0.55	69	120170	89	30	26	33	31
RFA_00601	Telomerase-vert links to Rfam database...	0.49	0.52	0.46	59	99108	82	28	40	14	55
RFA_00602	Telomerase-vert links to Rfam database...	0.66	0.68	0.64	79	101352	64	17	27	20	37
RFA_00632	HDV_ribozyme links to Rfam database...	0.34	0.36	0.33	10	4065	20	2	18	0	18
RFA_00636	HDV_ribozyme links to Rfam database...	0.41	0.43	0.40	12	3975	18	2	16	0	16
RFA_00767	Corona_pk3 links to Rfam database...	0.63	0.56	0.71	10	1877	4	0	4	0	8
RFA_00768	Corona_pk3 links to Rfam database...	0.47	0.44	0.50	8	1875	8	1	7	0	10
RFA_00769	Corona_pk3 links to Rfam database...	0.54	0.56	0.53	10	1934	9	4	5	0	8
RFA_00770	Corona_pk3 links to Rfam database...	0.63	0.56	0.71	10	2002	7	0	4	3	8
RFA_00773	Corona_pk3 links to Rfam database...	0.59	0.56	0.63	10	1937	6	1	5	0	8
RFA_00779	Corona_pk3 links to Rfam database...	0.61	0.56	0.67	10	1938	5	2	3	0	8
RFA_00808	RydC links to Rfam database...	0.62	0.56	0.69	9	2003	4	0	4	0	7
RFA_00809	RydC links to Rfam database...	0.37	0.38	0.38	6	2129	10	1	9	0	10
TMR_00007	tmRNA links to Rfam database...	0.41	0.38	0.45	41	61684	56	8	43	5	67
TMR_00008	tmRNA links to Rfam database...	0.53	0.51	0.55	54	65968	51	12	32	7	52
TMR_00010	tmRNA links to Rfam database...	0.25	0.25	0.25	24	57874	76	8	64	4	72
TMR_00012	tmRNA links to Rfam database...	0.41	0.43	0.39	35	64531	70	19	35	16	46
TMR_00014	tmRNA links to Rfam database...	0.60	0.58	0.63	64	68533	48	13	25	10	46
TMR_00017	tmRNA links to Rfam database...	0.51	0.49	0.53	50	67067	50	10	34	6	52
TMR_00018	tmRNA links to Rfam database...	0.37	0.37	0.37	34	64527	63	11	48	4	58
TMR_00028	tmRNA links to Rfam database...	0.40	0.40	0.40	39	62738	61	8	50	3	58
TMR_00030	tmRNA links to Rfam database...	0.29	0.29	0.30	32	75747	81	12	64	5	79
TMR_00034	tmRNA links to Rfam database...	0.63	0.61	0.65	67	59928	43	7	29	7	43
TMR_00035	tmRNA links to Rfam database...	0.40	0.43	0.38	42	67784	72	25	45	2	56
TMR_00036	tmRNA links to Rfam database...	0.55	0.54	0.56	55	90427	69	13	30	26	46
TMR_00038	tmRNA links to Rfam database...	0.22	0.21	0.23	23	71154	80	9	67	4	87
TMR_00042	tmRNA links to Rfam database...	0.35	0.35	0.36	34	62740	64	3	58	3	64
TMR_00046	tmRNA links to Rfam database...	0.28	0.28	0.28	27	62740	72	11	57	4	69
TMR_00047	tmRNA links to Rfam database...	0.30	0.33	0.27	19	48446	67	15	36	16	38
TMR_00048	tmRNA links to Rfam database...	0.23	0.24	0.23	23	64880	83	15	62	6	72
TMR_00049	tmRNA links to Rfam database...	0.57	0.59	0.56	51	63099	53	10	30	13	36
TMR_00051	tmRNA links to Rfam database...	0.74	0.68	0.80	64	65623	37	3	13	21	30
TMR_00055	tmRNA links to Rfam database...	0.25	0.26	0.24	30	78878	95	21	74	0	84
TMR_00057	tmRNA links to Rfam database...	0.17	0.20	0.15	16	73810	106	24	70	12	63
TMR_00061	tmRNA links to Rfam database...	0.30	0.29	0.30	29	59589	76	9	58	9	70
TMR_00062	tmRNA links to Rfam database...	0.58	0.56	0.60	58	78509	53	7	32	14	46
TMR_00064	tmRNA links to Rfam database...	0.50	0.49	0.51	50	76930	48	22	26	0	53
TMR_00065	tmRNA links to Rfam database...	0.53	0.52	0.54	55	76534	48	13	34	1	51
TMR_00067	tmRNA links to Rfam database...	0.39	0.39	0.39	45	82099	71	10	61	0	69
TMR_00073	tmRNA links to Rfam database...	0.58	0.50	0.67	59	65615	30	4	25	1	58
TMR_00076	tmRNA links to Rfam database...	0.39	0.40	0.38	40	70770	74	16	50	8	60
TMR_00080	tmRNA links to Rfam database...	0.41	0.40	0.42	38	70409	53	14	39	0	58
TMR_00081	tmRNA links to Rfam database...	0.55	0.51	0.59	54	67070	38	10	27	1	52
TMR_00082	tmRNA links to Rfam database...	0.70	0.68	0.71	65	67805	31	8	18	5	31
TMR_00083	tmRNA links to Rfam database...	0.47	0.46	0.48	48	68164	60	13	40	7	57
TMR_00092	tmRNA links to Rfam database...	0.39	0.42	0.37	42	67413	77	17	56	4	59
TMR_00093	tmRNA links to Rfam database...	0.38	0.37	0.40	38	64165	65	13	45	7	64
TMR_00096	tmRNA links to Rfam database...	0.50	0.48	0.52	48	64887	55	11	34	10	52
TMR_00101	tmRNA links to Rfam database...	0.42	0.39	0.45	42	64167	61	11	41	9	65
TMR_00102	tmRNA links to Rfam database...	0.24	0.25	0.23	25	64154	85	14	68	3	76
TMR_00103	tmRNA links to Rfam database...	0.56	0.57	0.55	62	64149	54	11	39	4	46
TMR_00104	-	0.09	0.10	0.08	7	66710	83	25	53	5	63
TMR_00106	tmRNA links to Rfam database...	0.40	0.39	0.41	47	89985	72	13	55	4	73
TMR_00109	tmRNA links to Rfam database...	0.55	0.52	0.59	63	88303	48	8	36	4	59
TMR_00111	tmRNA links to Rfam database...	0.40	0.41	0.39	50	90397	81	18	60	3	72
TMR_00116	tmRNA links to Rfam database...	0.77	0.72	0.82	75	64888	31	5	12	14	29
TMR_00117	tmRNA links to Rfam database...	0.68	0.67	0.69	79	80086	44	6	29	9	39
TMR_00118	tmRNA links to Rfam database...	0.47	0.47	0.48	56	81290	67	6	54	7	64
TMR_00119	tmRNA links to Rfam database...	0.32	0.32	0.32	33	71906	75	9	62	4	71
TMR_00123	tmRNA links to Rfam database...	0.40	0.39	0.41	39	66335	61	11	45	5	62
TMR_00124	tmRNA links to Rfam database...	0.60	0.58	0.61	57	70407	50	11	25	14	41
TMR_00125	tmRNA links to Rfam database...	0.39	0.39	0.39	39	64161	65	12	49	4	60
TMR_00127	tmRNA links to Rfam database...	0.48	0.47	0.48	46	62740	59	4	45	10	51
TMR_00128	tmRNA links to Rfam database...	0.39	0.40	0.40	38	60979	58	17	41	0	58
TMR_00131	tmRNA links to Rfam database...	0.47	0.43	0.51	43	64895	50	3	39	8	56
TMR_00135	tmRNA links to Rfam database...	0.33	0.33	0.33	33	62735	74	15	52	7	66
TMR_00136	tmRNA links to Rfam database...	0.21	0.22	0.21	22	74588	84	18	63	3	79
TMR_00137	tmRNA links to Rfam database...	0.22	0.21	0.22	19	60990	74	9	57	8	70
TMR_00139	tmRNA links to Rfam database...	0.60	0.64	0.56	58	62025	51	19	26	6	33
TMR_00140	tmRNA links to Rfam database...	0.52	0.52	0.52	52	73820	64	4	44	16	48
TMR_00142	tmRNA links to Rfam database...	0.50	0.51	0.50	52	70771	65	10	43	12	50
TMR_00143	tmRNA links to Rfam database...	0.48	0.48	0.48	49	64518	63	9	44	10	54
TMR_00144	tmRNA links to Rfam database...	0.26	0.26	0.25	27	74199	84	17	62	5	76
TMR_00146	tmRNA links to Rfam database...	0.83	0.88	0.79	37	32084	36	6	4	26	5
TMR_00150	tmRNA links to Rfam database...	0.73	0.71	0.75	30	43031	43	1	9	33	12
TMR_00152	tmRNA links to Rfam database...	0.27	0.26	0.28	30	81298	88	12	66	10	85
TMR_00155	tmRNA links to Rfam database...	0.57	0.54	0.61	56	61684	46	5	31	10	48
TMR_00156	tmRNA links to Rfam database...	0.38	0.35	0.41	34	60295	53	5	44	4	63
TMR_00158	tmRNA links to Rfam database...	0.50	0.48	0.53	48	60635	47	6	37	4	51
TMR_00159	tmRNA links to Rfam database...	0.57	0.58	0.57	53	62035	53	10	30	13	39
TMR_00160	tmRNA links to Rfam database...	0.45	0.44	0.45	42	64527	59	14	37	8	53
TMR_00164	tmRNA links to Rfam database...	0.42	0.42	0.42	44	66691	70	7	53	10	62
TMR_00165	tmRNA links to Rfam database...	0.32	0.31	0.33	30	61686	69	8	52	9	67
TMR_00166	tmRNA links to Rfam database...	0.46	0.43	0.51	43	61691	48	6	36	6	58
TMR_00168	tmRNA links to Rfam database...	0.72	0.68	0.76	78	60972	26	0	25	1	36
TMR_00173	tmRNA links to Rfam database...	0.36	0.36	0.36	15	42153	55	10	17	28	27
TMR_00179	tmRNA links to Rfam database...	0.61	0.58	0.64	57	67072	46	6	26	14	41
TMR_00180	tmRNA links to Rfam database...	0.66	0.66	0.66	65	67062	52	6	28	18	34
TMR_00182	tmRNA links to Rfam database...	0.17	0.17	0.17	17	66330	87	12	71	4	85
TMR_00183	tmRNA links to Rfam database...	0.25	0.24	0.25	25	63091	79	5	69	5	78
TMR_00184	tmRNA links to Rfam database...	0.43	0.42	0.43	43	63091	66	3	53	10	59
TMR_00193	tmRNA links to Rfam database...	0.40	0.41	0.40	33	59257	61	9	41	11	47
TMR_00194	tmRNA links to Rfam database...	0.42	0.42	0.43	39	62744	60	10	42	8	54
TMR_00196	tmRNA links to Rfam database...	0.38	0.35	0.41	34	60992	54	8	41	5	63
TMR_00199	tmRNA links to Rfam database...	0.55	0.57	0.54	52	62739	53	18	26	9	40
TMR_00200	-	0.60	0.52	0.68	39	41559	29	2	16	11	36
TMR_00204	tmRNA links to Rfam database...	0.44	0.41	0.47	40	60292	52	20	26	6	57
TMR_00207	tmRNA links to Rfam database...	0.29	0.28	0.30	29	72294	71	7	60	4	74
TMR_00223	tmRNA links to Rfam database...	0.26	0.26	0.26	25	64165	75	16	55	4	70
TMR_00224	tmRNA links to Rfam database...	0.42	0.38	0.46	38	64898	50	4	40	6	63
TMR_00226	tmRNA links to Rfam database...	0.46	0.47	0.46	49	69645	63	10	47	6	56
TMR_00227	tmRNA links to Rfam database...	0.35	0.36	0.34	36	70018	76	11	60	5	65
TMR_00228	tmRNA links to Rfam database...	0.31	0.32	0.30	35	88292	88	20	63	5	73
TMR_00234	tmRNA links to Rfam database...	0.31	0.32	0.31	33	58889	77	12	62	3	69
TMR_00238	tmRNA links to Rfam database...	0.32	0.33	0.32	33	84562	79	13	58	8	68
TMR_00239	tmRNA links to Rfam database...	0.50	0.50	0.49	48	61679	53	8	41	4	48
TMR_00240	tmRNA links to Rfam database...	0.61	0.58	0.64	49	63113	34	6	22	6	36
TMR_00246	-	0.54	0.59	0.50	20	78170	106	4	16	86	14
TMR_00248	tmRNA links to Rfam database...	0.14	0.18	0.11	7	54223	96	23	32	41	31
TMR_00257	tmRNA links to Rfam database...	0.12	0.11	0.12	11	67072	82	7	71	4	87
TMR_00259	tmRNA links to Rfam database...	0.56	0.55	0.58	57	67797	45	10	32	3	46
TMR_00261	tmRNA links to Rfam database...	0.58	0.58	0.57	59	66691	48	13	32	3	42
TMR_00262	tmRNA links to Rfam database...	0.57	0.57	0.58	59	74203	47	17	26	4	45
TMR_00271	tmRNA links to Rfam database...	0.64	0.60	0.67	55	64179	37	6	21	10	36
TMR_00274	tmRNA links to Rfam database...	0.31	0.30	0.31	32	66691	78	12	60	6	73
TMR_00278	tmRNA links to Rfam database...	0.51	0.51	0.51	52	67795	62	5	44	13	50
TMR_00279	tmRNA links to Rfam database...	0.57	0.57	0.56	54	68910	53	7	35	11	40
TMR_00280	tmRNA links to Rfam database...	0.51	0.50	0.51	51	65966	67	3	46	18	50
TMR_00283	tmRNA links to Rfam database...	0.50	0.48	0.53	46	65254	50	2	39	9	50
TMR_00289	tmRNA links to Rfam database...	0.57	0.56	0.58	55	67066	53	5	35	13	43
TMR_00290	tmRNA links to Rfam database...	0.48	0.48	0.48	44	64170	61	2	45	14	48
TMR_00296	tmRNA links to Rfam database...	0.28	0.28	0.28	27	68911	73	16	52	5	71
TMR_00298	tmRNA links to Rfam database...	0.50	0.51	0.49	52	68158	64	10	45	9	49
TMR_00300	tmRNA links to Rfam database...	0.55	0.55	0.55	62	70387	62	11	40	11	50
TMR_00301	tmRNA links to Rfam database...	0.42	0.43	0.41	41	82114	65	16	44	5	55
TMR_00302	tmRNA links to Rfam database...	0.29	0.30	0.28	28	77321	79	25	47	7	66
TMR_00305	tmRNA links to Rfam database...	0.68	0.64	0.72	65	60985	33	8	17	8	37
TMR_00306	tmRNA links to Rfam database...	0.45	0.43	0.46	46	64161	56	12	42	2	60
TMR_00310	tmRNA links to Rfam database...	0.37	0.36	0.38	35	63810	67	11	47	9	63
TMR_00317	tmRNA links to Rfam database...	0.65	0.64	0.66	65	68166	40	10	24	6	37
TMR_00331	tmRNA links to Rfam database...	0.68	0.72	0.65	59	66704	43	8	24	11	23
TMR_00332	tmRNA links to Rfam database...	0.49	0.43	0.54	43	67082	41	7	29	5	56
TMR_00334	tmRNA links to Rfam database...	0.68	0.62	0.74	63	66710	33	4	18	11	38
TMR_00337	tmRNA links to Rfam database...	0.55	0.52	0.58	62	82921	49	12	33	4	57
TMR_00340	tmRNA links to Rfam database...	0.52	0.52	0.52	42	64180	55	9	30	16	39
TMR_00341	tmRNA links to Rfam database...	0.35	0.37	0.33	34	63088	71	16	52	3	58
TMR_00343	tmRNA links to Rfam database...	0.48	0.44	0.53	46	64893	50	4	37	9	59
TMR_00345	tmRNA links to Rfam database...	0.66	0.64	0.67	67	63803	41	6	27	8	37
TMR_00346	tmRNA links to Rfam database...	0.26	0.26	0.27	24	64172	72	13	52	7	70
TMR_00348	tmRNA links to Rfam database...	0.25	0.24	0.27	24	77332	82	10	55	17	75
TMR_00352	tmRNA links to Rfam database...	0.36	0.40	0.32	30	95172	97	18	46	33	45
TMR_00353	tmRNA links to Rfam database...	0.44	0.47	0.42	49	84138	81	20	48	13	56
TMR_00357	tmRNA links to Rfam database...	0.40	0.37	0.44	34	82951	59	14	29	16	58
TMR_00358	tmRNA links to Rfam database...	0.47	0.46	0.47	46	74980	56	27	25	4	53
TMR_00361	-	0.29	0.33	0.26	24	93436	86	20	48	18	48
TMR_00366	tmRNA links to Rfam database...	0.51	0.51	0.52	51	67798	58	12	35	11	49
TMR_00372	tmRNA links to Rfam database...	0.61	0.61	0.61	59	70404	54	6	31	17	37
TMR_00374	tmRNA links to Rfam database...	0.27	0.26	0.29	24	81727	74	10	49	15	68
TMR_00375	tmRNA links to Rfam database...	0.53	0.52	0.54	51	73441	51	11	33	7	47
TMR_00376	tmRNA links to Rfam database...	0.69	0.67	0.70	64	74600	45	13	14	18	31
TMR_00378	tmRNA links to Rfam database...	0.26	0.25	0.28	24	67810	73	14	48	11	73
TMR_00383	tmRNA links to Rfam database...	0.41	0.41	0.41	41	66695	67	12	47	8	59
TMR_00384	tmRNA links to Rfam database...	0.30	0.29	0.31	31	65604	75	3	65	7	77
TMR_00393	tmRNA links to Rfam database...	0.60	0.62	0.58	33	53244	54	6	18	30	20
TMR_00395	tmRNA links to Rfam database...	0.51	0.49	0.54	53	64522	49	6	39	4	56
TMR_00398	tmRNA links to Rfam database...	0.45	0.43	0.47	46	65244	55	2	49	4	60
TMR_00399	tmRNA links to Rfam database...	0.35	0.34	0.36	32	64892	62	12	44	6	62
TMR_00404	tmRNA links to Rfam database...	0.37	0.40	0.35	37	67422	80	26	43	11	55
TMR_00408	tmRNA links to Rfam database...	0.58	0.60	0.56	53	65972	55	13	28	14	35
TMR_00409	tmRNA links to Rfam database...	0.85	0.85	0.85	39	68589	65	1	6	58	7
TMR_00411	tmRNA links to Rfam database...	0.66	0.67	0.66	58	60987	41	12	18	11	29
TMR_00415	tmRNA links to Rfam database...	0.44	0.44	0.45	44	67064	56	8	45	3	57
TMR_00419	tmRNA links to Rfam database...	0.56	0.51	0.61	57	81717	54	6	30	18	54
TMR_00422	tmRNA links to Rfam database...	0.51	0.52	0.51	48	67801	60	9	38	13	44
TMR_00423	tmRNA links to Rfam database...	0.08	0.10	0.08	7	63810	95	19	67	9	66
TMR_00427	tmRNA links to Rfam database...	0.34	0.32	0.36	31	67441	61	13	43	5	66
TMR_00429	tmRNA links to Rfam database...	0.56	0.52	0.59	57	74595	48	7	32	9	52
TMR_00430	tmRNA links to Rfam database...	0.27	0.27	0.27	29	82513	79	17	62	0	80
TMR_00431	tmRNA links to Rfam database...	0.68	0.69	0.68	38	51947	65	5	13	47	17
TMR_00432	tmRNA links to Rfam database...	0.38	0.38	0.38	40	79694	73	11	55	7	64
TMR_00433	tmRNA links to Rfam database...	0.50	0.48	0.52	51	80102	48	5	42	1	55
TMR_00439	tmRNA links to Rfam database...	0.48	0.50	0.46	51	68524	70	21	39	10	50
TMR_00441	tmRNA links to Rfam database...	0.11	0.12	0.11	10	62033	94	24	61	9	73
TMR_00443	tmRNA links to Rfam database...	0.54	0.51	0.57	53	67068	47	11	29	7	51
TMR_00448	tmRNA links to Rfam database...	0.34	0.33	0.36	30	62045	59	4	49	6	62
TMR_00451	tmRNA links to Rfam database...	0.18	0.19	0.18	17	63449	84	20	60	4	72
TMR_00457	tmRNA links to Rfam database...	0.40	0.38	0.42	39	78513	58	15	39	4	63
TMR_00458	tmRNA links to Rfam database...	0.46	0.46	0.46	43	63453	57	9	41	7	50
TMR_00460	tmRNA links to Rfam database...	0.46	0.43	0.49	46	79307	57	11	37	9	60
TMR_00465	tmRNA links to Rfam database...	0.26	0.28	0.25	26	64159	80	27	49	4	68
TMR_00469	tmRNA links to Rfam database...	0.53	0.53	0.52	53	64519	52	17	31	4	47
TMR_00472	tmRNA links to Rfam database...	0.42	0.40	0.44	39	64532	60	8	41	11	58
TMR_00478	tmRNA links to Rfam database...	0.19	0.20	0.17	20	71895	100	19	76	5	79
TMR_00498	tmRNA links to Rfam database...	0.33	0.35	0.32	35	68896	84	16	59	9	64
TMR_00499	tmRNA links to Rfam database...	0.21	0.21	0.20	21	64517	89	8	74	7	78
TMR_00501	tmRNA links to Rfam database...	0.44	0.46	0.43	42	62383	58	12	44	2	50
TMR_00502	tmRNA links to Rfam database...	0.22	0.24	0.21	22	75359	94	18	67	9	71
TMR_00503	tmRNA links to Rfam database...	0.43	0.41	0.45	46	67793	66	4	53	9	65
TMR_00519	tmRNA links to Rfam database...	0.39	0.39	0.40	37	63098	66	12	43	11	58
TMR_00520	tmRNA links to Rfam database...	0.52	0.52	0.53	51	63094	55	14	31	10	48
TMR_00522	tmRNA links to Rfam database...	0.39	0.39	0.40	38	63095	66	13	44	9	59
TMR_00528	tmRNA links to Rfam database...	0.30	0.29	0.32	28	63102	70	16	44	10	69
TMR_00540	tmRNA links to Rfam database...	0.44	0.41	0.47	43	73444	60	11	38	11	61
TMR_00541	tmRNA links to Rfam database...	0.40	0.40	0.40	42	61671	72	3	60	9	63
TMR_00544	tmRNA links to Rfam database...	0.54	0.52	0.55	56	89575	55	8	37	10	52
TMR_00547	tmRNA links to Rfam database...	0.39	0.39	0.39	39	65240	64	6	56	2	61
TMR_00553	tmRNA links to Rfam database...	0.40	0.38	0.42	31	48131	49	5	38	6	50
TMR_00559	tmRNA links to Rfam database...	0.39	0.38	0.40	38	62386	61	10	47	4	63
TMR_00560	tmRNA links to Rfam database...	0.57	0.54	0.60	53	60987	46	4	31	11	45
TMR_00562	tmRNA links to Rfam database...	0.32	0.31	0.33	32	72673	72	11	55	6	70
TMR_00563	tmRNA links to Rfam database...	0.64	0.61	0.67	63	75372	43	9	22	12	40
TMR_00566	tmRNA links to Rfam database...	0.67	0.60	0.74	60	60645	32	2	19	11	40
TMR_00568	tmRNA links to Rfam database...	0.36	0.34	0.38	34	60636	62	4	52	6	65
TMR_00570	tmRNA links to Rfam database...	0.57	0.55	0.60	53	60289	48	5	31	12	44
TMR_00571	tmRNA links to Rfam database...	0.66	0.61	0.71	60	60642	38	2	22	14	39
TMR_00576	tmRNA links to Rfam database...	0.62	0.61	0.63	62	60279	47	13	24	10	40
TMR_00579	tmRNA links to Rfam database...	0.25	0.28	0.22	25	80488	98	18	70	10	65
TMR_00580	tmRNA links to Rfam database...	0.68	0.64	0.72	64	60637	36	2	23	11	36
TMR_00581	tmRNA links to Rfam database...	0.24	0.21	0.26	21	62401	64	2	57	5	77
TMR_00584	tmRNA links to Rfam database...	0.59	0.57	0.61	55	60985	47	3	32	12	42
TMR_00586	tmRNA links to Rfam database...	0.50	0.49	0.51	48	60980	57	8	39	10	49
TMR_00587	tmRNA links to Rfam database...	0.60	0.57	0.63	57	61334	40	6	28	6	43
TMR_00588	tmRNA links to Rfam database...	0.26	0.27	0.25	27	77312	89	22	60	7	74
TMR_00594	tmRNA links to Rfam database...	0.14	0.14	0.13	15	79285	106	24	77	5	89
TMR_00596	tmRNA links to Rfam database...	0.30	0.28	0.32	27	78125	73	12	46	15	68
TMR_00599	tmRNA links to Rfam database...	0.24	0.28	0.22	20	63097	79	26	47	6	52
TMR_00600	tmRNA links to Rfam database...	0.33	0.33	0.32	38	79682	82	12	68	2	77
TMR_00601	tmRNA links to Rfam database...	0.31	0.29	0.33	12	58960	76	7	17	52	30
TMR_00603	tmRNA links to Rfam database...	0.67	0.60	0.74	26	60343	67	1	8	58	17
TMR_00604	tmRNA links to Rfam database...	0.65	0.63	0.67	71	62729	35	4	31	0	41
TMR_00605	tmRNA links to Rfam database...	0.54	0.52	0.57	56	74207	47	14	28	5	52
TMR_00606	tmRNA links to Rfam database...	0.42	0.41	0.44	44	68905	64	5	52	7	63
TMR_00609	tmRNA links to Rfam database...	0.70	0.67	0.72	76	63441	39	2	27	10	37
TMR_00610	tmRNA links to Rfam database...	0.62	0.63	0.63	65	62024	51	7	32	12	39
TMR_00611	tmRNA links to Rfam database...	0.44	0.45	0.43	46	61317	62	13	49	0	56
TMR_00612	tmRNA links to Rfam database...	0.36	0.37	0.35	38	60617	75	9	62	4	66
TMR_00614	tmRNA links to Rfam database...	0.72	0.69	0.75	72	60979	33	2	22	9	32
TMR_00615	tmRNA links to Rfam database...	0.68	0.63	0.73	60	63821	33	8	14	11	36
TMR_00616	tmRNA links to Rfam database...	0.41	0.40	0.41	40	67064	62	12	45	5	59
TMR_00617	tmRNA links to Rfam database...	0.46	0.50	0.43	29	34648	49	13	26	10	29
TMR_00623	tmRNA links to Rfam database...	0.44	0.44	0.45	47	61321	63	2	55	6	61
TMR_00624	tmRNA links to Rfam database...	0.71	0.69	0.73	75	62378	40	6	22	12	33
TMR_00625	tmRNA links to Rfam database...	0.41	0.42	0.39	45	78888	79	19	51	9	61
TMR_00626	tmRNA links to Rfam database...	0.23	0.23	0.23	25	67787	88	12	72	4	84
TMR_00680	tmRNA links to Rfam database...	0.36	0.36	0.35	36	67793	75	11	56	8	63
TMR_00681	tmRNA links to Rfam database...	0.38	0.36	0.39	35	65977	62	8	46	8	62
TMR_00683	tmRNA links to Rfam database...	0.17	0.18	0.15	18	82911	108	17	82	9	82
TMR_00686	tmRNA links to Rfam database...	0.44	0.45	0.42	49	71137	78	16	51	11	59
TMR_00687	tmRNA links to Rfam database...	0.56	0.53	0.59	59	71531	51	11	30	10	52
TMR_00696	tmRNA links to Rfam database...	0.16	0.16	0.17	18	84971	101	12	77	12	96
TMR_00698	tmRNA links to Rfam database...	0.47	0.45	0.50	47	63096	50	11	36	3	57
TMR_00699	tmRNA links to Rfam database...	0.49	0.44	0.55	45	67079	42	4	33	5	57
TMR_00702	tmRNA links to Rfam database...	0.39	0.36	0.42	36	67075	55	12	38	5	64
TMR_00703	tmRNA links to Rfam database...	0.50	0.49	0.52	49	67433	51	6	40	5	50
TMR_00706	tmRNA links to Rfam database...	0.59	0.56	0.62	58	66336	39	7	29	3	45
TMR_00711	tmRNA links to Rfam database...	0.61	0.61	0.60	60	67796	45	13	27	5	38
TMR_00712	tmRNA links to Rfam database...	0.30	0.31	0.30	34	78491	84	13	68	3	75
TMR_00716	tmRNA links to Rfam database...	0.32	0.31	0.33	31	62741	67	12	51	4	69

^top

Performance of CRWrnafold - scored lower in this pairwise comparison

1. Total counts & total scores for CRWrnafold

Total Base Pair Counts
Total TP	41196
Total TN	135219201
Total FP	73518
Total FP CONTRA	10702
Total FP INCONS	52585
Total FP COMP	10231
Total FN	62418

Total Scores
MCC	0.395
Average MCC ± 95% Confidence Intervals	0.408 ± 0.013
Sensitivity	0.398
Positive Predictive Value	0.394
Nr of predictions	790

^top

2. Individual counts for CRWrnafold [ download as .csv ]

RNA Chain	Rfam family	MCC	SENS	PPV	TP	TN	FP	FP CONTRA	FP INCONS	FP COMP	FN
ASE_00001	RNaseP_arch links to Rfam database...	0.61	0.57	0.64	43	34124	30	3	21	6	32
ASE_00002	RNaseP_arch links to Rfam database...	0.59	0.56	0.63	41	35446	31	2	22	7	32
ASE_00004	RNaseP_bact_a links to Rfam database...	0.69	0.68	0.69	66	47800	30	9	20	1	31
ASE_00005	RNaseP_bact_a links to Rfam database...	0.50	0.48	0.52	56	57863	51	3	48	0	61
ASE_00006	RNaseP_bact_a links to Rfam database...	0.29	0.29	0.30	27	47495	65	8	56	1	66
ASE_00007	RNaseP_bact_a links to Rfam database...	0.34	0.33	0.36	36	59585	65	3	61	1	74
ASE_00009	RNaseP_arch links to Rfam database...	0.68	0.67	0.69	45	26041	20	5	15	0	22
ASE_00012	RNaseP_bact_a links to Rfam database...	0.42	0.41	0.43	51	73800	75	6	63	6	72
ASE_00014	RNaseP_arch links to Rfam database...	0.47	0.47	0.47	50	54179	57	7	49	1	56
ASE_00017	RNaseP_nuc links to Rfam database...	0.25	0.28	0.22	18	50958	82	22	42	18	46
ASE_00018	RNaseP_bact_a links to Rfam database...	0.53	0.51	0.56	68	80480	54	4	49	1	66
ASE_00020	RNaseP_bact_a links to Rfam database...	0.63	0.60	0.68	75	73809	39	6	30	3	51
ASE_00021	RNaseP_bact_a links to Rfam database...	0.59	0.55	0.62	88	104055	57	8	45	4	72
ASE_00022	RNaseP_bact_b links to Rfam database...	0.49	0.46	0.51	57	82917	58	9	45	4	67
ASE_00023	RNaseP_bact_a links to Rfam database...	0.47	0.47	0.48	60	84129	72	9	57	6	67
ASE_00025	RNaseP_nuc links to Rfam database...	0.29	0.30	0.28	21	78531	108	10	44	54	50
ASE_00026	RNaseP_bact_a links to Rfam database...	0.30	0.30	0.30	33	59575	80	7	70	3	77
ASE_00028	RNaseP_bact_b links to Rfam database...	0.57	0.55	0.59	69	84550	54	9	38	7	57
ASE_00029	RNaseP_bact_a links to Rfam database...	0.50	0.48	0.51	59	82913	56	9	47	0	63
ASE_00030	RNaseP_bact_a links to Rfam database...	0.64	0.61	0.67	89	85359	44	4	39	1	56
ASE_00031	RNaseP_bact_a links to Rfam database...	0.39	0.38	0.39	48	86614	79	9	65	5	78
ASE_00032	RNaseP_bact_a links to Rfam database...	0.49	0.47	0.51	56	80090	62	3	51	8	62
ASE_00033	RNaseP_bact_a links to Rfam database...	0.35	0.34	0.36	41	64867	73	12	60	1	80
ASE_00035	RNaseP_bact_a links to Rfam database...	0.12	0.12	0.13	14	70389	100	12	85	3	104
ASE_00036	RNaseP_bact_a links to Rfam database...	0.60	0.58	0.62	77	75731	50	8	39	3	55
ASE_00037	RNaseP_bact_a links to Rfam database...	0.41	0.39	0.43	43	59240	59	5	52	2	67
ASE_00038	RNaseP_bact_a links to Rfam database...	0.55	0.53	0.57	54	53533	46	4	37	5	47
ASE_00040	RNaseP_bact_a links to Rfam database...	0.45	0.43	0.48	57	78883	69	4	59	6	76
ASE_00041	RNaseP_bact_a links to Rfam database...	0.39	0.36	0.41	39	57536	61	5	50	6	69
ASE_00042	RNaseP_bact_a links to Rfam database...	0.42	0.40	0.45	58	89970	75	6	66	3	87
ASE_00044	RNaseP_bact_a links to Rfam database...	0.78	0.76	0.79	80	54514	26	4	17	5	25
ASE_00046	RNaseP_bact_a links to Rfam database...	0.46	0.44	0.49	45	50311	49	6	41	2	58
ASE_00047	RNaseP_bact_a links to Rfam database...	0.34	0.32	0.36	42	74189	75	3	71	1	88
ASE_00052	RNaseP_bact_a links to Rfam database...	0.38	0.36	0.40	40	61325	65	4	56	5	72
ASE_00053	RNaseP_bact_a links to Rfam database...	0.45	0.44	0.46	59	79274	70	9	59	2	74
ASE_00056	-	0.33	0.33	0.33	24	30804	50	6	42	2	48
ASE_00057	RNaseP_bact_a links to Rfam database...	0.53	0.51	0.55	68	82091	63	8	48	7	66
ASE_00064	RNaseP_bact_a links to Rfam database...	0.35	0.35	0.35	31	45363	66	2	55	9	58
ASE_00066	RNaseP_bact_a links to Rfam database...	0.37	0.35	0.39	45	72276	71	4	65	2	85
ASE_00068	RNaseP_bact_a links to Rfam database...	0.21	0.20	0.22	17	37599	61	6	53	2	68
ASE_00069	RNaseP_bact_a links to Rfam database...	0.56	0.53	0.59	74	82903	54	7	44	3	66
ASE_00074	RNaseP_bact_a links to Rfam database...	0.50	0.49	0.51	58	67783	56	4	51	1	61
ASE_00075	RNaseP_bact_a links to Rfam database...	0.64	0.60	0.68	97	108669	49	5	40	4	65
ASE_00076	RNaseP_bact_a links to Rfam database...	0.57	0.54	0.61	64	68160	45	3	38	4	54
ASE_00077	RNaseP_bact_a links to Rfam database...	0.32	0.30	0.33	26	45072	58	8	44	6	60
ASE_00078	RNaseP_bact_a links to Rfam database...	0.12	0.12	0.12	10	42988	78	4	69	5	73
ASE_00079	RNaseP_bact_a links to Rfam database...	0.50	0.46	0.53	46	55525	43	2	38	3	54
ASE_00080	RNaseP_bact_a links to Rfam database...	0.35	0.33	0.36	41	71518	72	5	67	0	82
ASE_00081	RNaseP_bact_a links to Rfam database...	0.32	0.30	0.35	29	49686	56	3	52	1	68
ASE_00082	RNaseP_bact_a links to Rfam database...	0.45	0.41	0.49	48	70402	60	1	49	10	68
ASE_00083	RNaseP_bact_a links to Rfam database...	0.75	0.71	0.79	78	62382	28	1	20	7	32
ASE_00084	RNaseP_bact_a links to Rfam database...	0.39	0.38	0.40	38	53532	60	6	52	2	61
ASE_00087	RNaseP_bact_a links to Rfam database...	0.58	0.54	0.62	78	88285	48	3	44	1	66
ASE_00089	-	0.39	0.38	0.40	30	31300	46	1	44	1	49
ASE_00090	RNaseP_bact_a links to Rfam database...	0.61	0.61	0.61	62	55510	44	2	37	5	39
ASE_00092	RNaseP_bact_a links to Rfam database...	0.56	0.55	0.56	62	63436	53	9	39	5	51
ASE_00096	RNaseP_bact_a links to Rfam database...	0.35	0.35	0.36	40	63435	73	5	66	2	75
ASE_00099	RNaseP_bact_a links to Rfam database...	0.64	0.63	0.65	75	64505	41	4	36	1	45
ASE_00100	RNaseP_nuc links to Rfam database...	0.24	0.25	0.24	19	82135	112	11	50	51	57
ASE_00102	RNaseP_bact_a links to Rfam database...	0.24	0.23	0.25	38	117705	113	13	99	1	128
ASE_00104	RNaseP_bact_a links to Rfam database...	0.46	0.44	0.48	52	64153	57	3	53	1	67
ASE_00105	RNaseP_bact_a links to Rfam database...	0.47	0.46	0.49	51	64157	59	7	46	6	60
ASE_00107	RNaseP_bact_a links to Rfam database...	0.66	0.64	0.69	81	73036	37	2	34	1	46
ASE_00108	RNaseP_nuc links to Rfam database...	0.40	0.43	0.37	27	46898	73	13	33	27	36
ASE_00111	RNaseP_nuc links to Rfam database...	0.26	0.33	0.20	19	49990	87	31	46	10	38
ASE_00112	RNaseP_bact_a links to Rfam database...	0.60	0.59	0.61	69	75353	51	3	41	7	47
ASE_00115	RNaseP_bact_a links to Rfam database...	0.66	0.63	0.69	64	54522	37	4	25	8	37
ASE_00116	RNaseP_arch links to Rfam database...	0.04	0.05	0.05	3	31562	66	6	55	5	63
ASE_00118	RNaseP_bact_a links to Rfam database...	0.49	0.47	0.51	48	60631	53	2	45	6	54
ASE_00119	RNaseP_bact_a links to Rfam database...	0.86	0.84	0.88	91	62732	15	2	10	3	17
ASE_00120	RNaseP_arch links to Rfam database...	0.58	0.55	0.60	52	46885	34	4	30	0	42
ASE_00121	RNaseP_arch links to Rfam database...	0.43	0.42	0.43	39	45059	57	6	46	5	53
ASE_00122	RNaseP_bact_a links to Rfam database...	0.26	0.25	0.28	22	43286	62	2	55	5	66
ASE_00123	RNaseP_bact_a links to Rfam database...	0.35	0.33	0.37	28	38427	54	0	48	6	57
ASE_00125	RNaseP_bact_a links to Rfam database...	0.51	0.50	0.52	44	39255	42	4	37	1	44
ASE_00126	RNaseP_bact_a links to Rfam database...	0.38	0.37	0.39	30	40393	49	6	41	2	52
ASE_00128	RNaseP_bact_a links to Rfam database...	0.62	0.60	0.65	60	53208	37	6	27	4	40
ASE_00129	RNaseP_bact_a links to Rfam database...	0.64	0.60	0.67	67	62735	34	3	30	1	44
ASE_00131	RNaseP_bact_a links to Rfam database...	0.51	0.48	0.55	41	39265	39	1	33	5	44
ASE_00132	RNaseP_bact_a links to Rfam database...	0.22	0.22	0.23	21	50312	71	11	59	1	74
ASE_00134	RNaseP_bact_a links to Rfam database...	0.42	0.42	0.43	40	50310	59	5	48	6	55
ASE_00135	RNaseP_bact_a links to Rfam database...	0.46	0.46	0.46	50	63082	60	7	51	2	59
ASE_00136	RNaseP_bact_a links to Rfam database...	0.45	0.45	0.45	41	48114	54	8	42	4	51
ASE_00137	RNaseP_bact_a links to Rfam database...	0.37	0.37	0.37	36	48419	62	3	58	1	62
ASE_00138	RNaseP_bact_a links to Rfam database...	0.24	0.23	0.25	19	40395	61	5	51	5	62
ASE_00139	RNaseP_bact_a links to Rfam database...	0.61	0.58	0.64	60	54191	38	2	32	4	44
ASE_00140	RNaseP_bact_a links to Rfam database...	0.64	0.59	0.69	74	70769	34	7	26	1	51
ASE_00142	RNaseP_bact_a links to Rfam database...	0.70	0.66	0.73	81	67050	35	3	27	5	41
ASE_00145	RNaseP_arch links to Rfam database...	0.36	0.35	0.36	39	70018	73	5	63	5	72
ASE_00146	RNaseP_bact_a links to Rfam database...	0.49	0.47	0.52	58	70765	54	8	45	1	66
ASE_00148	RNaseP_arch links to Rfam database...	0.48	0.47	0.50	72	112432	71	10	61	0	82
ASE_00151	RNaseP_bact_a links to Rfam database...	0.41	0.39	0.43	38	51915	56	7	43	6	60
ASE_00153	RNaseP_nuc links to Rfam database...	0.68	0.68	0.67	50	57555	66	2	23	41	23
ASE_00154	RNaseP_arch links to Rfam database...	0.44	0.43	0.45	46	65239	60	4	52	4	61
ASE_00155	RNaseP_arch links to Rfam database...	0.40	0.40	0.41	57	93388	86	10	73	3	85
ASE_00163	RNaseP_bact_a links to Rfam database...	0.29	0.29	0.30	27	53210	73	5	59	9	66
ASE_00165	RNaseP_bact_a links to Rfam database...	0.44	0.43	0.46	43	52882	50	6	44	0	58
ASE_00168	RNaseP_nuc links to Rfam database...	0.18	0.22	0.15	14	60632	96	24	56	16	50
ASE_00169	RNaseP_bact_a links to Rfam database...	0.23	0.22	0.24	24	57192	78	4	71	3	83
ASE_00170	RNaseP_bact_a links to Rfam database...	0.66	0.65	0.67	60	48739	34	6	23	5	33
ASE_00171	RNaseP_bact_a links to Rfam database...	0.46	0.45	0.48	42	48429	45	5	40	0	52
ASE_00172	RNaseP_bact_a links to Rfam database...	0.56	0.54	0.58	57	58897	43	3	39	1	49
ASE_00174	RNaseP_bact_a links to Rfam database...	0.47	0.45	0.49	49	60976	53	4	46	3	60
ASE_00175	RNaseP_bact_a links to Rfam database...	0.24	0.24	0.25	26	59926	86	2	77	7	81
ASE_00176	RNaseP_bact_a links to Rfam database...	0.49	0.46	0.52	51	59932	49	9	39	1	59
ASE_00179	RNaseP_bact_a links to Rfam database...	0.56	0.56	0.56	47	44169	39	7	30	2	37
ASE_00180	RNaseP_bact_a links to Rfam database...	0.55	0.53	0.58	53	51268	40	8	31	1	47
ASE_00181	RNaseP_bact_a links to Rfam database...	0.42	0.42	0.43	44	57527	64	2	57	5	62
ASE_00182	RNaseP_bact_a links to Rfam database...	0.51	0.49	0.54	67	84130	58	4	54	0	69
ASE_00183	RNaseP_bact_a links to Rfam database...	0.55	0.53	0.57	60	61319	49	5	41	3	53
ASE_00184	RNaseP_bact_a links to Rfam database...	0.51	0.50	0.52	51	54516	49	4	44	1	51
ASE_00185	RNaseP_bact_a links to Rfam database...	0.64	0.62	0.66	79	73417	44	5	35	4	49
ASE_00186	RNaseP_bact_a links to Rfam database...	0.62	0.60	0.65	79	78882	47	4	38	5	53
ASE_00187	RNaseP_arch links to Rfam database...	0.33	0.31	0.35	36	68531	71	6	62	3	79
ASE_00189	RNaseP_bact_b links to Rfam database...	0.49	0.48	0.51	49	63094	51	3	44	4	53
ASE_00190	RNaseP_bact_b links to Rfam database...	0.52	0.51	0.53	46	45365	46	7	33	6	44
ASE_00192	RNaseP_bact_b links to Rfam database...	0.40	0.39	0.42	52	84542	78	11	61	6	81
ASE_00194	RNaseP_bact_b links to Rfam database...	0.41	0.40	0.42	48	73423	69	6	59	4	71
ASE_00195	-	0.61	0.61	0.62	81	86189	53	7	43	3	52
ASE_00196	RNaseP_arch links to Rfam database...	0.80	0.79	0.81	59	31553	20	2	12	6	16
ASE_00197	RNaseP_bact_a links to Rfam database...	0.57	0.54	0.60	79	89122	56	5	47	4	66
ASE_00198	RNaseP_bact_a links to Rfam database...	0.56	0.56	0.57	57	52550	43	7	36	0	45
ASE_00203	RNaseP_bact_a links to Rfam database...	0.62	0.61	0.63	59	46572	39	5	29	5	37
ASE_00204	RNaseP_bact_b links to Rfam database...	0.43	0.42	0.45	47	67791	63	7	51	5	65
ASE_00205	RNaseP_arch links to Rfam database...	0.45	0.46	0.44	41	45963	55	8	44	3	49
ASE_00209	RNaseP_arch links to Rfam database...	0.37	0.35	0.39	31	42992	50	4	44	2	57
ASE_00210	RNaseP_arch links to Rfam database...	0.48	0.48	0.49	31	27198	38	3	29	6	34
ASE_00212	RNaseP_bact_a links to Rfam database...	0.58	0.55	0.61	82	93826	57	4	49	4	66
ASE_00213	RNaseP_arch links to Rfam database...	0.60	0.61	0.60	40	27194	28	6	21	1	26
ASE_00214	RNaseP_bact_a links to Rfam database...	0.72	0.71	0.74	73	56181	37	4	22	11	30
ASE_00215	RNaseP_bact_a links to Rfam database...	0.46	0.44	0.47	44	48422	51	4	46	1	55
ASE_00216	RNaseP_bact_a links to Rfam database...	0.71	0.71	0.72	58	39259	23	7	16	0	24
ASE_00217	RNaseP_bact_a links to Rfam database...	0.26	0.24	0.28	22	40391	58	3	54	1	68
ASE_00221	RNaseP_bact_a links to Rfam database...	0.49	0.44	0.55	51	64527	45	1	41	3	66
ASE_00222	RNaseP_arch links to Rfam database...	0.62	0.61	0.63	96	111949	60	4	52	4	61
ASE_00227	RNaseP_bact_a links to Rfam database...	0.52	0.50	0.54	66	78881	56	4	52	0	67
ASE_00228	RNaseP_bact_a links to Rfam database...	0.34	0.34	0.35	29	46887	61	9	46	6	57
ASE_00229	RNaseP_bact_a links to Rfam database...	0.44	0.43	0.46	37	42405	47	5	39	3	50
ASE_00231	RNaseP_bact_a links to Rfam database...	0.62	0.63	0.63	60	47799	37	7	29	1	36
ASE_00232	RNaseP_bact_a links to Rfam database...	0.68	0.68	0.69	57	38420	27	8	18	1	27
ASE_00234	RNaseP_bact_a links to Rfam database...	0.52	0.50	0.55	64	75350	55	4	48	3	65
ASE_00237	RNaseP_nuc links to Rfam database...	0.09	0.11	0.07	6	45672	87	25	50	12	50
ASE_00238	RNaseP_bact_a links to Rfam database...	0.56	0.54	0.57	62	64152	51	3	44	4	52
ASE_00240	RNaseP_bact_a links to Rfam database...	0.04	0.04	0.05	4	46581	84	5	75	4	89
ASE_00241	RNaseP_bact_a links to Rfam database...	0.53	0.52	0.54	45	43873	46	2	36	8	42
ASE_00242	RNaseP_bact_a links to Rfam database...	0.48	0.46	0.50	51	60973	54	3	48	3	61
ASE_00246	RNaseP_nuc links to Rfam database...	0.18	0.21	0.16	14	48118	79	29	44	6	53
ASE_00247	RNaseP_nuc links to Rfam database...	0.40	0.41	0.39	26	54219	80	1	39	40	38
ASE_00248	RNaseP_bact_a links to Rfam database...	0.28	0.27	0.30	31	62378	72	7	65	0	83
ASE_00250	RNaseP_bact_a links to Rfam database...	0.51	0.50	0.52	65	78878	65	11	49	5	66
ASE_00252	RNaseP_bact_a links to Rfam database...	0.41	0.39	0.43	66	115288	91	6	80	5	102
ASE_00254	RNaseP_bact_a links to Rfam database...	0.62	0.61	0.64	50	36778	34	3	25	6	32
ASE_00255	RNaseP_bact_a links to Rfam database...	0.58	0.55	0.61	72	74573	52	4	42	6	58
ASE_00257	RNaseP_bact_a links to Rfam database...	0.53	0.53	0.53	51	50944	49	6	39	4	46
ASE_00259	RNaseP_bact_a links to Rfam database...	0.35	0.33	0.36	40	73043	72	7	63	2	81
ASE_00263	RNaseP_bact_a links to Rfam database...	0.77	0.77	0.77	92	70380	29	6	22	1	28
ASE_00264	RNaseP_nuc links to Rfam database...	0.41	0.41	0.41	41	49040	65	6	54	5	59
ASE_00267	RNaseP_bact_a links to Rfam database...	0.17	0.17	0.17	15	45064	77	8	63	6	73
ASE_00270	RNaseP_bact_a links to Rfam database...	0.62	0.59	0.65	76	72273	41	7	34	0	52
ASE_00274	RNaseP_bact_a links to Rfam database...	0.41	0.41	0.42	42	55512	57	10	47	0	61
ASE_00277	RNaseP_bact_a links to Rfam database...	0.30	0.30	0.31	27	48117	61	8	53	0	64
ASE_00279	RNaseP_bact_a links to Rfam database...	0.30	0.29	0.31	29	53208	64	10	54	0	72
ASE_00280	RNaseP_bact_a links to Rfam database...	0.42	0.42	0.43	41	51907	56	5	50	1	57
ASE_00281	RNaseP_bact_a links to Rfam database...	0.47	0.44	0.49	39	44472	41	1	39	1	49
ASE_00282	RNaseP_bact_a links to Rfam database...	0.55	0.53	0.58	67	77699	54	7	42	5	60
ASE_00283	RNaseP_bact_a links to Rfam database...	0.73	0.72	0.75	77	61673	30	3	23	4	30
ASE_00284	RNaseP_bact_a links to Rfam database...	0.52	0.51	0.52	55	58206	52	7	43	2	53
ASE_00285	RNaseP_bact_a links to Rfam database...	0.50	0.48	0.53	58	68897	54	7	44	3	64
ASE_00286	RNaseP_bact_a links to Rfam database...	0.28	0.28	0.29	26	46574	70	8	57	5	66
ASE_00287	RNaseP_bact_a links to Rfam database...	0.34	0.32	0.36	33	54854	63	5	54	4	70
ASE_00288	RNaseP_bact_a links to Rfam database...	0.36	0.33	0.39	31	45976	53	4	45	4	62
ASE_00289	RNaseP_bact_a links to Rfam database...	0.42	0.40	0.44	63	100883	83	7	72	4	94
ASE_00291	-	0.54	0.53	0.55	50	48425	44	0	41	3	44
ASE_00292	RNaseP_bact_a links to Rfam database...	0.45	0.43	0.48	59	81687	65	5	59	1	79
ASE_00294	RNaseP_bact_a links to Rfam database...	0.38	0.36	0.41	61	114334	89	2	84	3	110
ASE_00295	RNaseP_bact_a links to Rfam database...	0.37	0.35	0.39	46	73803	74	4	67	3	85
ASE_00296	RNaseP_bact_a links to Rfam database...	0.21	0.21	0.22	30	91671	105	6	99	0	115
ASE_00297	RNaseP_bact_a links to Rfam database...	0.54	0.54	0.54	53	52877	48	5	40	3	45
ASE_00298	RNaseP_bact_a links to Rfam database...	0.41	0.39	0.43	44	67425	66	1	58	7	69
ASE_00299	RNaseP_bact_a links to Rfam database...	0.45	0.46	0.45	46	49353	64	7	49	8	54
ASE_00313	RNaseP_nuc links to Rfam database...	0.62	0.62	0.62	55	62392	56	5	29	22	34
ASE_00316	RNaseP_nuc links to Rfam database...	0.58	0.60	0.55	59	107773	85	13	35	37	39
ASE_00318	RNaseP_bact_b links to Rfam database...	0.53	0.53	0.54	62	80086	56	11	41	4	56
ASE_00327	RNaseP_nuc links to Rfam database...	0.71	0.71	0.71	63	57202	43	4	22	17	26
ASE_00328	RNaseP_bact_b links to Rfam database...	0.56	0.54	0.58	60	72668	47	7	36	4	52
ASE_00330	RNaseP_nuc links to Rfam database...	0.55	0.56	0.54	50	56188	56	6	36	14	40
ASE_00332	RNaseP_bact_a links to Rfam database...	0.55	0.54	0.57	74	81680	58	5	51	2	64
ASE_00335	RNaseP_bact_b links to Rfam database...	0.53	0.52	0.55	60	75356	56	10	40	6	56
ASE_00337	RNaseP_nuc links to Rfam database...	0.29	0.31	0.28	22	39262	66	11	45	10	49
ASE_00338	RNaseP_nuc links to Rfam database...	0.35	0.35	0.35	34	66332	80	7	57	16	64
ASE_00339	RNaseP_bact_a links to Rfam database...	0.47	0.46	0.48	55	80086	67	15	44	8	64
ASE_00340	RNaseP_bact_a links to Rfam database...	0.32	0.32	0.32	27	45971	62	10	48	4	58
ASE_00342	RNaseP_bact_a links to Rfam database...	0.55	0.52	0.58	60	62378	47	2	41	4	55
ASE_00343	RNaseP_bact_a links to Rfam database...	0.28	0.29	0.27	33	83312	97	13	78	6	80
ASE_00346	RNaseP_arch links to Rfam database...	0.45	0.44	0.47	43	48113	53	5	44	4	54
ASE_00353	RNaseP_bact_a links to Rfam database...	0.38	0.38	0.38	41	57863	70	3	63	4	66
ASE_00359	RNaseP_arch links to Rfam database...	0.27	0.28	0.27	22	42695	61	8	53	0	58
ASE_00360	RNaseP_arch links to Rfam database...	0.30	0.29	0.30	19	29340	46	10	34	2	46
ASE_00361	RNaseP_bact_a links to Rfam database...	0.47	0.45	0.50	57	75352	61	9	48	4	70
ASE_00362	RNaseP_bact_a links to Rfam database...	0.63	0.62	0.64	56	48117	36	4	28	4	35
ASE_00363	RNaseP_bact_a links to Rfam database...	0.34	0.34	0.34	32	51267	68	4	57	7	62
ASE_00364	RNaseP_bact_a links to Rfam database...	0.44	0.42	0.46	44	54189	58	4	48	6	61
ASE_00366	RNaseP_bact_a links to Rfam database...	0.42	0.42	0.41	41	58554	62	13	45	4	57
ASE_00367	RNaseP_bact_a links to Rfam database...	0.26	0.27	0.26	23	42982	69	8	58	3	63
ASE_00369	RNaseP_bact_a links to Rfam database...	0.65	0.64	0.67	68	55844	38	4	29	5	39
ASE_00370	RNaseP_bact_a links to Rfam database...	0.51	0.50	0.51	42	41823	47	4	36	7	42
ASE_00372	RNaseP_bact_a links to Rfam database...	0.59	0.59	0.58	59	51902	44	8	34	2	41
ASE_00374	RNaseP_bact_a links to Rfam database...	0.19	0.18	0.20	16	44769	65	13	52	0	72
ASE_00375	RNaseP_bact_a links to Rfam database...	0.68	0.64	0.73	70	60282	30	1	25	4	40
ASE_00376	RNaseP_bact_a links to Rfam database...	0.43	0.43	0.44	45	56851	57	3	54	0	60
ASE_00377	RNaseP_bact_a links to Rfam database...	0.68	0.66	0.70	71	57529	36	4	26	6	36
ASE_00379	RNaseP_bact_a links to Rfam database...	0.44	0.43	0.45	38	45971	53	6	41	6	51
ASE_00380	RNaseP_bact_a links to Rfam database...	0.54	0.53	0.56	52	54853	45	7	34	4	47
ASE_00382	RNaseP_bact_a links to Rfam database...	0.42	0.42	0.42	35	41822	52	7	41	4	49
ASE_00383	RNaseP_bact_a links to Rfam database...	0.32	0.31	0.34	33	54517	65	4	61	0	72
ASE_00384	RNaseP_bact_a links to Rfam database...	0.31	0.30	0.31	28	48427	61	3	58	0	64
ASE_00385	RNaseP_bact_a links to Rfam database...	0.24	0.25	0.24	20	41822	64	10	53	1	61
ASE_00386	RNaseP_bact_a links to Rfam database...	0.39	0.39	0.41	37	50312	58	7	47	4	59
ASE_00387	RNaseP_bact_a links to Rfam database...	0.46	0.45	0.47	47	55844	57	5	49	3	57
ASE_00388	RNaseP_bact_a links to Rfam database...	0.33	0.33	0.33	29	45665	65	5	54	6	60
ASE_00390	RNaseP_bact_a links to Rfam database...	0.20	0.19	0.21	16	42119	67	2	58	7	69
ASE_00393	RNaseP_bact_a links to Rfam database...	0.24	0.24	0.26	22	47809	71	4	60	7	71
ASE_00394	RNaseP_bact_a links to Rfam database...	0.56	0.55	0.57	51	46882	39	3	35	1	42
ASE_00395	RNaseP_bact_a links to Rfam database...	0.39	0.39	0.39	33	41532	58	4	47	7	51
ASE_00396	RNaseP_bact_a links to Rfam database...	0.13	0.13	0.14	11	41535	72	4	66	2	72
ASE_00397	RNaseP_bact_a links to Rfam database...	0.52	0.50	0.55	52	54520	47	3	40	4	53
ASE_00398	RNaseP_bact_a links to Rfam database...	0.59	0.56	0.62	58	55851	45	3	33	9	46
ASE_00400	RNaseP_bact_a links to Rfam database...	0.53	0.52	0.53	55	57867	49	4	44	1	51
ASE_00401	RNaseP_bact_a links to Rfam database...	0.58	0.57	0.58	72	76904	52	11	41	0	54
ASE_00402	RNaseP_bact_a links to Rfam database...	0.28	0.27	0.29	23	42408	56	2	53	1	62
ASE_00403	RNaseP_bact_a links to Rfam database...	0.49	0.47	0.51	50	55847	52	3	45	4	57
ASE_00404	RNaseP_bact_a links to Rfam database...	0.24	0.24	0.25	20	42991	65	4	56	5	65
ASE_00406	RNaseP_bact_a links to Rfam database...	0.25	0.24	0.26	23	48739	73	5	61	7	71
ASE_00408	-	0.49	0.49	0.48	35	32312	42	3	35	4	36
ASE_00409	-	0.48	0.48	0.48	40	40958	43	5	38	0	43
ASE_00411	RNaseP_bact_a links to Rfam database...	0.24	0.24	0.24	21	49369	71	5	60	6	68
ASE_00412	RNaseP_bact_a links to Rfam database...	0.57	0.55	0.60	58	58214	42	6	33	3	47
ASE_00413	RNaseP_bact_a links to Rfam database...	0.28	0.30	0.27	24	44462	65	14	51	0	57
ASE_00414	RNaseP_bact_a links to Rfam database...	0.24	0.23	0.25	22	46273	70	5	60	5	73
ASE_00415	RNaseP_bact_a links to Rfam database...	0.41	0.41	0.42	42	54845	61	9	50	2	61
ASE_00416	RNaseP_bact_a links to Rfam database...	0.46	0.45	0.48	57	77301	69	8	55	6	70
ASE_00417	RNaseP_arch links to Rfam database...	0.48	0.48	0.48	48	54515	54	8	44	2	52
ASE_00418	RNaseP_arch links to Rfam database...	0.18	0.19	0.17	14	38699	70	7	61	2	61
ASE_00419	RNaseP_bact_a links to Rfam database...	0.72	0.68	0.76	70	54854	27	3	19	5	33
ASE_00422	RNaseP_bact_a links to Rfam database...	0.71	0.69	0.73	65	46882	30	2	22	6	29
ASE_00423	RNaseP_bact_a links to Rfam database...	0.65	0.65	0.65	71	56844	39	9	29	1	38
ASE_00426	RNaseP_bact_a links to Rfam database...	0.22	0.21	0.22	23	60972	80	7	73	0	85
ASE_00428	RNaseP_bact_a links to Rfam database...	0.53	0.50	0.55	63	76522	55	8	43	4	62
ASE_00429	-	0.45	0.45	0.45	30	28137	38	6	30	2	36
ASE_00430	RNaseP_bact_a links to Rfam database...	0.68	0.66	0.71	64	46881	32	3	23	6	33
ASE_00431	RNaseP_bact_a links to Rfam database...	0.35	0.34	0.38	32	46275	56	5	48	3	63
ASE_00434	RNaseP_bact_b links to Rfam database...	0.50	0.50	0.50	55	68154	64	10	46	8	55
ASE_00437	RNaseP_bact_a links to Rfam database...	0.33	0.32	0.34	43	79274	84	6	78	0	92
ASE_00438	RNaseP_bact_a links to Rfam database...	0.47	0.45	0.49	52	65959	55	5	50	0	64
ASE_00441	RNaseP_bact_a links to Rfam database...	0.82	0.76	0.89	85	64166	20	1	9	10	27
ASE_00447	RNaseP_bact_a links to Rfam database...	0.45	0.43	0.48	50	60273	59	1	54	4	66
ASE_00448	RNaseP_bact_a links to Rfam database...	0.18	0.18	0.18	20	64148	99	6	87	6	92
ASE_00451	RNaseP_bact_a links to Rfam database...	0.42	0.41	0.44	51	70759	66	3	63	0	74
CRW_00002	-	0.32	0.31	0.33	82	408808	203	23	147	33	182
CRW_00004	-	0.47	0.47	0.46	62	154156	105	9	63	33	69
CRW_00005	-	0.52	0.52	0.53	68	137947	87	4	56	27	64
CRW_00007	-	0.21	0.23	0.20	31	144834	131	39	87	5	102
CRW_00009	-	0.51	0.53	0.50	73	137928	97	15	59	23	65
CRW_00010	-	0.52	0.54	0.51	68	102698	81	8	57	16	58
CRW_00011	-	0.63	0.66	0.60	91	118190	69	9	51	9	47
CRW_00012	-	0.18	0.20	0.16	28	146981	148	34	110	4	113
CRW_00013	Intron_gpI links to Rfam database...	0.24	0.25	0.24	29	103617	106	20	74	12	86
CRW_00014	-	0.43	0.44	0.42	54	103612	86	9	65	12	69
CRW_00016	Intron_gpI links to Rfam database...	0.59	0.56	0.61	67	77312	55	6	36	13	53
CRW_00017	-	0.49	0.52	0.47	47	92135	81	13	40	28	44
CRW_00018	-	0.37	0.45	0.31	54	182538	132	48	70	14	67
CRW_00019	-	0.74	0.75	0.73	103	127624	60	8	30	22	34
CRW_00054	SSU_rRNA_bacteria links to Rfam database...	0.57	0.56	0.57	257	1107367	210	22	170	18	199
CRW_00068	SSU_rRNA_bacteria links to Rfam database...	0.57	0.57	0.58	259	1108856	209	20	170	19	198
CRW_00140	SSU_rRNA_bacteria links to Rfam database...	0.49	0.49	0.48	226	1135811	256	30	211	15	237
CRW_00173	SSU_rRNA_bacteria links to Rfam database...	0.38	0.38	0.39	168	1082220	282	31	237	14	277
CRW_00245	SSU_rRNA_bacteria links to Rfam database...	0.53	0.53	0.54	240	1105883	225	26	179	20	213
CRW_00270	SSU_rRNA_bacteria links to Rfam database...	0.49	0.49	0.50	225	1111832	246	27	202	17	230
CRW_00271	SSU_rRNA_bacteria links to Rfam database...	0.69	0.67	0.71	311	1122312	152	21	107	24	151
CRW_00273	SSU_rRNA_bacteria links to Rfam database...	0.41	0.41	0.41	181	1085155	279	39	226	14	265
CRW_00275	SSU_rRNA_bacteria links to Rfam database...	0.65	0.65	0.66	296	1114820	177	28	127	22	161
CRW_00277	SSU_rRNA_bacteria links to Rfam database...	0.44	0.43	0.44	196	1110351	263	35	213	15	257
CRW_00278	SSU_rRNA_bacteria links to Rfam database...	0.41	0.40	0.42	182	1129824	270	20	230	20	268
CRW_00280	SSU_rRNA_bacteria links to Rfam database...	0.67	0.66	0.68	299	1117818	160	18	125	17	154
CRW_00281	SSU_rRNA_bacteria links to Rfam database...	0.60	0.59	0.61	274	1144893	197	27	147	23	190
CRW_00283	SSU_rRNA_bacteria links to Rfam database...	0.38	0.38	0.37	164	1015587	296	41	233	22	268
CRW_00284	SSU_rRNA_bacteria links to Rfam database...	0.51	0.50	0.51	228	1131314	245	27	191	27	228
CRW_00285	SSU_rRNA_bacteria links to Rfam database...	0.68	0.67	0.69	305	1117819	160	25	111	24	153
CRW_00292	SSU_rRNA_bacteria links to Rfam database...	0.33	0.33	0.34	151	1123806	312	48	245	19	310
CRW_00338	-	0.11	0.12	0.10	47	1052969	417	74	336	7	348
CRW_00417	-	0.47	0.46	0.49	121	458154	138	19	109	10	141
CRW_00418	-	0.11	0.11	0.12	28	441094	219	29	179	11	232
CRW_00419	-	0.11	0.11	0.11	28	463922	224	26	190	8	237
CRW_00421	-	0.44	0.44	0.45	116	462946	156	22	119	15	150
CRW_00422	-	0.26	0.25	0.27	66	455293	196	40	136	20	197
CRW_00423	-	0.14	0.15	0.13	28	242337	197	39	152	6	161
CRW_00424	-	0.30	0.31	0.30	113	789017	287	29	237	21	250
CRW_00426	-	0.22	0.22	0.22	58	457187	213	31	170	12	207
CRW_00427	-	0.30	0.30	0.30	78	454321	200	36	146	18	183
CRW_00428	-	0.22	0.22	0.22	56	465839	213	30	170	13	204
CRW_00429	-	0.16	0.17	0.15	39	306679	223	33	185	5	194
CRW_00430	-	0.28	0.27	0.29	73	456241	183	22	154	7	193
CRW_00433	-	0.24	0.24	0.26	62	467785	187	23	158	6	201
CRW_00434	-	0.28	0.27	0.30	71	457208	176	24	143	9	192
CRW_00435	-	0.34	0.33	0.35	87	451479	166	32	127	7	178
CRW_00437	-	0.37	0.37	0.38	95	456241	166	25	129	12	165
CRW_00438	-	0.37	0.35	0.39	94	454341	154	16	130	8	174
CRW_00441	-	0.34	0.32	0.35	85	454341	166	23	132	11	177
CRW_00442	-	0.36	0.36	0.35	95	453360	184	38	135	11	166
CRW_00443	-	0.31	0.30	0.32	79	456243	194	27	141	26	181
CRW_00444	-	0.30	0.30	0.31	78	459108	186	25	150	11	185
CRW_00445	-	0.28	0.27	0.28	72	458149	187	34	148	5	193
CRW_00446	-	0.25	0.25	0.26	66	468741	200	28	161	11	199
CRW_00447	-	0.28	0.28	0.28	72	452417	197	30	157	10	188
CRW_00448	-	0.21	0.21	0.21	55	457190	217	34	167	16	206
CRW_00449	-	0.21	0.20	0.22	51	444861	190	28	156	6	209
CRW_00450	-	0.28	0.27	0.29	72	458156	192	23	152	17	190
CRW_00451	-	0.22	0.22	0.23	57	457196	202	24	169	9	207
CRW_00452	-	0.32	0.31	0.33	81	453380	179	30	137	12	181
CRW_00453	-	0.14	0.13	0.15	35	452439	210	30	172	8	226
CRW_00456	-	0.15	0.14	0.15	38	470689	214	27	181	6	227
CRW_00457	-	0.25	0.24	0.27	63	467791	186	25	149	12	201
CRW_00458	-	0.43	0.43	0.44	113	464872	153	31	114	8	151
CRW_00459	-	0.35	0.34	0.36	89	461993	180	16	143	21	174
CRW_00462	-	0.24	0.23	0.25	61	458160	190	33	149	8	200
CRW_00463	-	0.52	0.50	0.54	126	445807	130	25	82	23	128
CRW_00464	-	0.30	0.29	0.31	77	461995	176	26	143	7	187
CRW_00466	SSU_rRNA_bacteria links to Rfam database...	0.71	0.70	0.71	320	1116316	158	22	107	29	138
CRW_00530	-	0.23	0.25	0.21	67	534774	263	62	192	9	201
CRW_00535	-	0.33	0.35	0.30	116	898086	295	80	188	27	212
CRW_00538	-	0.23	0.25	0.21	76	811810	307	80	209	18	224
CRW_00542	-	0.12	0.14	0.11	45	994333	407	100	277	30	272
CRW_00589	SSU_rRNA_bacteria links to Rfam database...	0.35	0.34	0.36	153	1094035	290	40	232	18	292
CRW_00590	SSU_rRNA_bacteria links to Rfam database...	0.61	0.59	0.64	268	1119334	184	21	133	30	184
CRW_00591	SSU_rRNA_bacteria links to Rfam database...	0.56	0.56	0.56	249	1098461	218	30	163	25	197
CRW_00594	-	0.21	0.23	0.20	89	1028443	369	80	283	6	306
CRW_00596	-	0.23	0.24	0.21	92	1024167	349	55	282	12	294
CRW_00604	-	0.60	0.64	0.55	52	411684	224	14	28	182	29
CRW_00605	-	0.37	0.39	0.35	27	183843	150	17	34	99	43
CRW_00606	-	0.66	0.68	0.64	63	559055	272	9	26	237	29
CRW_00607	-	0.53	0.55	0.52	42	536049	294	8	31	255	35
CRW_00608	-	0.64	0.63	0.64	50	35700	30	6	22	2	29
CRW_00610	Intron_gpI links to Rfam database...	0.46	0.44	0.48	36	36240	39	7	32	0	45
CRW_00611	-	0.80	0.79	0.81	59	31302	17	4	10	3	16
CRW_00612	-	0.22	0.27	0.18	25	270342	207	29	84	94	68
CRW_00613	Intron_gpI links to Rfam database...	0.79	0.74	0.84	58	34911	19	0	11	8	20
CRW_00614	Intron_gpI links to Rfam database...	0.09	0.11	0.08	6	121691	140	26	48	66	51
CRW_00615	-	0.31	0.35	0.26	29	553768	313	24	57	232	53
CRW_00617	-	0.14	0.17	0.12	11	426336	250	28	51	171	53
CRW_00618	Intron_gpI links to Rfam database...	0.20	0.21	0.19	13	56212	77	12	43	22	48
CRW_00619	Intron_gpI links to Rfam database...	0.23	0.26	0.20	19	164932	156	20	54	82	54
CRW_00620	Intron_gpI links to Rfam database...	0.17	0.21	0.14	13	150882	154	25	55	74	50
CRW_00621	Intron_gpI links to Rfam database...	0.17	0.17	0.17	12	153109	150	13	47	90	59
CRW_00623	Intron_gpI links to Rfam database...	0.13	0.14	0.11	12	129686	140	24	73	43	71
CRW_00626	-	0.47	0.54	0.41	56	100890	91	28	51	12	48
CRW_00629	-	0.50	0.52	0.49	63	91250	67	18	47	2	59
CRW_00632	-	0.55	0.55	0.55	71	82900	65	8	49	8	57
CRW_00633	Intron_gpI links to Rfam database...	0.39	0.42	0.38	44	63429	73	15	58	0	62
CRW_00634	Intron_gpI links to Rfam database...	0.25	0.28	0.22	26	64504	92	23	67	2	68
CRW_00635	-	0.38	0.38	0.38	52	109140	92	16	70	6	85
CRW_00636	-	0.48	0.49	0.46	70	114809	89	16	65	8	73
CRW_00637	-	0.47	0.48	0.46	76	133738	95	13	76	6	82
CRW_00639	-	0.50	0.52	0.48	72	126607	82	23	54	5	66
CRW_00641	-	0.36	0.37	0.36	28	39825	58	12	38	8	48
CRW_00642	-	0.43	0.46	0.41	30	47204	58	7	37	14	35
CRW_00643	-	0.38	0.41	0.36	50	123116	107	25	65	17	72
CRW_00645	-	0.81	0.84	0.78	56	35439	25	6	10	9	11
CRW_00646	-	0.50	0.53	0.47	34	34907	45	7	32	6	30
CRW_00648	-	0.27	0.28	0.27	42	137917	119	18	98	3	106
CRW_00649	-	0.60	0.64	0.56	79	204340	131	8	53	70	45
CRW_00650	-	0.33	0.34	0.33	48	112906	101	7	89	5	94
CRW_00651	-	0.25	0.26	0.24	32	99992	106	21	83	2	89
CRW_00652	-	0.57	0.59	0.55	77	132214	90	12	52	26	53
CRW_00653	-	0.66	0.66	0.65	89	94693	55	5	43	7	45
CRW_00654	-	0.83	0.82	0.83	102	78087	26	2	19	5	22
CRW_00655	-	0.67	0.68	0.67	84	89127	48	7	35	6	40
CRW_00656	-	0.37	0.36	0.38	46	90403	78	10	66	2	83
CRW_00657	-	0.79	0.79	0.78	108	105891	35	3	28	4	28
CRW_00658	-	0.34	0.35	0.32	36	74579	79	17	59	3	66
CRW_00659	-	0.30	0.33	0.28	20	32314	59	14	37	8	41
CRW_00660	-	0.54	0.55	0.54	33	22094	31	5	23	3	27
CRW_00661	-	0.00	0.00	0.00	0	24242	68	20	48	0	51
CRW_00662	-	0.41	0.42	0.41	27	28614	48	7	32	9	38
CRW_00663	-	0.00	0.00	0.00	0	26036	71	11	59	1	61
CRW_00664	-	0.19	0.21	0.18	16	53540	83	16	56	11	62
CRW_00665	-	0.00	0.00	0.00	0	23592	63	19	42	2	48
CRW_00666	-	0.37	0.39	0.35	49	96002	94	14	76	4	77
CRW_00668	-	0.31	0.32	0.31	48	163723	122	15	92	15	102
CRW_00669	-	0.30	0.31	0.28	37	97331	97	21	72	4	82
CRW_00670	Intron_gpI links to Rfam database...	0.45	0.47	0.44	56	69999	70	9	61	0	64
CRW_00671	Intron_gpI links to Rfam database...	0.61	0.58	0.64	68	62728	44	7	32	5	49
CRW_00672	Intron_gpI links to Rfam database...	0.76	0.77	0.75	85	72276	39	6	23	10	26
CRW_00673	-	0.70	0.75	0.65	79	100006	60	22	21	17	26
CRW_00674	Intron_gpI links to Rfam database...	0.55	0.55	0.56	68	83314	58	12	42	4	56
CRW_00676	Intron_gpI links to Rfam database...	0.52	0.57	0.47	65	93390	78	24	49	5	50
CRW_00677	-	0.52	0.53	0.51	56	71901	57	12	41	4	49
CRW_00678	-	0.39	0.41	0.36	50	666297	318	15	73	230	71
CRW_00679	-	0.36	0.37	0.35	40	76523	79	13	60	6	67
CRW_00680	-	0.35	0.40	0.30	49	516475	256	34	78	144	73
CRW_00681	-	0.21	0.22	0.19	25	112920	115	20	85	10	87
CRW_00683	-	0.21	0.23	0.19	31	460161	267	33	95	139	104
CRW_00684	-	0.29	0.32	0.27	43	612013	300	32	83	185	92
CRW_00685	-	0.55	0.61	0.50	65	156949	98	21	45	32	41
CRW_00686	-	0.36	0.38	0.35	47	95133	94	11	75	8	78
CRW_00687	-	0.58	0.62	0.54	41	28604	35	5	30	0	25
CRW_00688	-	0.62	0.65	0.59	37	21882	27	10	16	1	20
CRW_00689	-	0.66	0.70	0.62	54	33583	35	11	22	2	23
CRW_00690	-	0.54	0.54	0.54	37	33342	37	6	26	5	32
CRW_00691	-	0.53	0.55	0.51	37	27188	37	4	32	1	30
CRW_00692	Intron_gpI links to Rfam database...	0.39	0.40	0.39	36	68542	75	10	47	18	54
CRW_00693	-	0.58	0.60	0.56	73	89123	65	9	48	8	49
CRW_00694	-	0.61	0.61	0.60	75	85781	55	11	38	6	47
CRW_00699	-	0.58	0.58	0.59	73	91682	58	4	47	7	53
CRW_00700	-	0.54	0.56	0.52	82	180743	98	17	59	22	65
CRW_00702	-	0.24	0.35	0.16	26	357274	237	91	44	102	49
CRW_00703	-	0.23	0.26	0.21	17	40388	72	20	45	7	49
CRW_00704	-	0.82	0.81	0.83	76	386668	201	0	16	185	18
CRW_00706	-	0.48	0.54	0.43	32	695536	339	10	32	297	27
CRW_00710	-	0.57	0.57	0.57	65	1040288	387	11	39	337	49
CRW_00712	-	0.27	0.33	0.22	36	952727	403	48	79	276	72
CRW_00713	-	0.58	0.58	0.58	59	731343	329	4	39	286	42
CRW_00714	-	0.43	0.49	0.38	52	186219	130	20	64	46	55
CRW_00715	-	0.69	0.68	0.70	71	69276	33	2	29	2	33
CRW_00716	-	0.68	0.71	0.66	63	193657	122	7	26	89	26
CRW_00717	-	0.33	0.33	0.34	49	153589	114	19	78	17	99
CRW_00718	-	0.23	0.22	0.23	42	189856	148	10	128	10	149
CRW_00719	-	0.40	0.42	0.38	38	230081	164	14	48	102	53
CRW_00720	-	0.10	0.11	0.09	10	208229	174	12	84	78	81
CRW_00721	-	0.59	0.57	0.61	39	58589	56	3	22	31	29
CRW_00764	-	0.09	0.09	0.09	18	252909	196	38	151	7	178
CRW_00765	-	0.41	0.41	0.40	106	452413	176	25	132	19	151
CRW_00766	-	0.18	0.18	0.18	43	440153	206	27	168	11	197
CRW_00768	-	0.38	0.37	0.38	96	471656	179	22	132	25	163
CRW_00769	-	0.43	0.42	0.44	106	451484	154	27	108	19	146
CRW_00772	SSU_rRNA_bacteria links to Rfam database...	0.19	0.18	0.19	74	945610	325	42	274	9	330
CRW_00773	-	0.47	0.46	0.48	120	451476	149	24	105	20	139
CRW_00774	-	0.18	0.18	0.18	47	488302	225	39	178	8	216
CRW_00775	-	0.19	0.20	0.18	42	314587	215	38	154	23	170
CRW_00777	-	0.25	0.27	0.24	82	719059	279	63	196	20	222
CRW_00778	SSU_rRNA_bacteria links to Rfam database...	0.42	0.41	0.42	159	1201646	291	25	195	71	225
CRW_00779	-	0.28	0.28	0.27	120	1031326	338	33	287	18	302
CRW_00780	-	0.13	0.13	0.13	34	475544	230	36	186	8	221
CRW_00783	-	0.20	0.20	0.20	51	453371	220	26	180	14	208
CRW_00784	-	0.26	0.26	0.27	67	456240	199	26	157	16	195
CRW_00785	-	0.30	0.29	0.30	74	452430	189	23	149	17	179
CRW_00787	-	0.28	0.29	0.28	88	646633	259	39	193	27	218
CRW_00789	SSU_rRNA_bacteria links to Rfam database...	0.51	0.50	0.52	224	1137356	236	32	174	30	223
CRW_00793	-	0.31	0.32	0.31	120	1048689	320	49	218	53	257
CRW_00794	-	0.25	0.25	0.25	62	434530	200	22	164	14	184
CRW_00796	-	0.13	0.13	0.14	30	384783	202	26	164	12	205
CRW_00797	-	0.25	0.26	0.24	89	692885	299	49	230	20	253
CRW_00801	-	0.43	0.44	0.43	109	438263	163	37	107	19	140
CRW_00802	-	0.30	0.30	0.31	75	460078	195	26	141	28	178
CRW_00813	-	0.18	0.23	0.14	31	530751	279	68	115	96	102
CRW_00815	-	0.46	0.48	0.43	76	159720	103	25	74	4	82
CRW_00816	-	0.37	0.40	0.34	52	143765	104	27	72	5	77
CRW_00820	-	0.46	0.48	0.45	69	136350	95	7	77	11	76
CRW_00849	SSU_rRNA_bacteria links to Rfam database...	0.47	0.47	0.47	222	1117790	269	18	230	21	248
CRW_00997	SSU_rRNA_bacteria links to Rfam database...	0.69	0.69	0.69	318	1135820	167	27	113	27	146
CRW_01134	-	0.29	0.29	0.29	123	964928	311	41	263	7	304
CRW_01168	-	0.41	0.41	0.41	168	900747	251	32	206	13	243
CRW_01186	-	0.27	0.27	0.27	105	836184	289	42	240	7	281
CRW_01188	-	0.12	0.12	0.11	48	837445	375	55	317	3	345
CRW_01189	-	0.24	0.24	0.23	95	862232	324	57	257	10	297
CRW_01214	-	0.21	0.21	0.22	85	931905	318	31	274	13	320
CRW_01222	-	0.26	0.25	0.26	101	912892	291	46	237	8	296
CRW_01224	-	0.24	0.24	0.24	94	912883	306	34	265	7	303
CRW_01239	-	0.21	0.21	0.21	81	840064	325	54	257	14	301
CRW_01250	-	0.30	0.30	0.30	114	781500	271	38	223	10	264
CRW_01260	-	0.15	0.15	0.15	59	912890	348	33	294	21	334
CRW_01266	-	0.30	0.30	0.30	115	818176	283	35	234	14	266
CRW_01271	-	0.29	0.30	0.28	115	827136	300	53	237	10	266
CRW_01275	-	0.33	0.33	0.33	144	1082222	305	49	241	15	288
CRW_01283	-	0.39	0.39	0.39	161	963557	267	29	219	19	248
CRW_01314	-	0.28	0.27	0.28	110	937374	293	34	247	12	297
CRW_01343	SSU_rRNA_archaea links to Rfam database...	0.37	0.36	0.38	158	977489	271	43	211	17	276
CRW_01344	-	0.23	0.23	0.23	83	791549	283	43	236	4	283
PDB_00005	Tymo_tRNA-like links to Rfam database...	0.88	0.79	1.00	11	935	0	0	0	0	3
PDB_00018	-	0.21	0.20	0.25	4	1019	12	2	10	0	16
PDB_00020	-	0.42	0.35	0.54	7	767	6	0	6	0	13
PDB_00041	-	0.70	0.50	1.00	6	624	0	0	0	0	6
PDB_00053	-	0.73	0.55	1.00	6	429	0	0	0	0	5
PDB_00056	-	0.93	0.88	1.00	14	616	0	0	0	0	2
PDB_00072	-	0.33	0.35	0.32	73	148015	152	34	118	0	137
PDB_00078	-	0.54	0.52	0.56	60	49662	48	5	43	0	55
PDB_00079	-	0.65	0.63	0.68	90	121638	72	11	32	29	52
PDB_00123	-	-0.01	0.00	0.00	0	4155	31	0	31	0	36
PDB_00124	-	-0.02	0.00	0.00	0	488	8	2	6	0	10
PDB_00128	-	0.80	0.71	0.91	10	485	1	0	1	0	4
PDB_00134	-	0.66	0.63	0.71	5	371	2	0	2	0	3
PDB_00138	-	0.79	0.63	1.00	5	373	0	0	0	0	3
PDB_00209	-	0.68	0.55	0.86	6	554	1	1	0	0	5
PDB_00243	-	0.76	0.58	1.00	7	623	0	0	0	0	5
PDB_00278	-	0.13	0.13	0.13	9	24908	59	5	54	0	63
PDB_00352	-	0.39	0.37	0.44	7	1209	9	0	9	0	12
PDB_00370	-	0.00	0.00	0.00	0	15179	46	13	33	0	25
PDB_00403	-	0.45	0.44	0.45	68	124598	92	18	66	8	85
PDB_00409	-	0.27	0.31	0.23	77	688219	317	88	167	62	168
PDB_00423	-	0.28	0.27	0.29	20	26726	50	5	45	0	54
PDB_00447	-	-0.01	0.00	0.00	0	7110	30	6	24	0	44
PDB_00571	tRNA links to Rfam database...	0.85	0.76	0.95	19	3301	1	1	0	0	6
PDB_00701	-	0.10	0.10	0.10	11	45344	96	10	86	0	98
PDB_00703	SSU_rRNA_bacteria links to Rfam database...	0.65	0.61	0.69	304	1073402	166	18	121	27	191
PDB_00713	-	-0.01	0.00	0.00	0	1998	19	1	17	1	21
PDB_00716	HDV_ribozyme links to Rfam database...	-0.01	0.00	0.00	0	2680	22	0	21	1	23
PDB_00747	-	0.49	0.44	0.56	35	24468	28	2	26	0	45
PDB_00804	-	0.00	0.00	0.00	0	15344	56	10	46	0	50
PDB_00805	-	0.59	0.58	0.60	176	467736	139	17	99	23	126
PDB_00827	Intron_gpI links to Rfam database...	0.69	0.63	0.76	51	26961	18	0	16	2	30
PDB_00828	Purine links to Rfam database...	0.88	0.78	1.00	21	2464	0	0	0	0	6
PDB_00829	Purine links to Rfam database...	0.86	0.75	1.00	18	2260	0	0	0	0	6
PDB_00842	-	0.79	0.63	1.00	5	373	0	0	0	0	3
PDB_00851	-	0.42	0.39	0.47	16	4719	18	4	14	0	25
PDB_00857	-	0.77	0.60	1.00	9	1072	0	0	0	0	6
PDB_00874	-	0.10	0.10	0.13	2	931	13	2	11	0	18
PDB_00886	-	-0.01	0.00	0.00	0	4152	34	0	34	0	40
PDB_00917	-	0.50	0.48	0.52	46	35156	48	5	38	5	49
PDB_00918	-	0.56	0.43	0.75	3	321	1	1	0	0	4
PDB_00919	RNaseP_bact_a links to Rfam database...	0.36	0.33	0.39	34	44165	56	6	48	2	69
PDB_01009	tRNA links to Rfam database...	0.90	0.90	0.90	19	2464	4	0	2	2	2
PDB_01020	Purine links to Rfam database...	0.86	0.74	1.00	17	2261	1	0	0	1	6
PDB_01040	-	0.31	0.30	0.35	6	1111	11	0	11	0	14
PDB_01059	-	0.56	0.43	0.75	3	227	1	1	0	0	4
PDB_01070	-	0.27	0.26	0.29	14	12672	34	0	34	0	40
PDB_01073	SAM links to Rfam database...	0.52	0.47	0.59	16	4344	12	1	10	1	18
PDB_01092	glmS links to Rfam database...	0.68	0.62	0.76	32	10111	12	1	9	2	20
PDB_01129	-	0.30	0.31	0.29	22	35435	58	23	31	4	49
PDB_01157	-	0.28	0.27	0.29	26	49997	63	13	50	0	72
PDB_01166	-	0.43	0.42	0.45	88	181909	116	23	86	7	124
PDB_01194	-	0.44	0.33	0.63	5	488	3	1	2	0	10
PDB_01201	-	0.82	0.68	1.00	15	1113	0	0	0	0	7
PDB_01203	-	0.74	0.68	0.81	13	1160	3	2	1	0	6
PDB_01250	-	0.15	0.15	0.16	6	12053	31	4	27	0	35
PDB_01260	-	0.44	0.36	0.56	9	1814	7	0	7	0	16
PDB_01261	-	0.48	0.45	0.50	152	467726	150	4	146	0	184
PDB_01273	SSU_rRNA_bacteria links to Rfam database...	0.54	0.52	0.56	253	1117806	233	20	181	32	238
PDB_01281	-	-0.03	0.00	0.00	0	366	12	0	12	0	14
PDB_01299	-	-0.01	0.00	0.00	0	894	9	2	7	0	15
PDB_01309	-	-0.01	0.00	0.00	0	9122	58	7	51	0	39
RFA_00597	Telomerase-vert links to Rfam database...	0.23	0.26	0.21	28	97771	118	29	75	14	81
RFA_00598	Telomerase-vert links to Rfam database...	0.35	0.37	0.34	37	84557	94	11	61	22	64
RFA_00599	Telomerase-vert links to Rfam database...	0.69	0.72	0.67	80	101355	60	17	23	20	31
RFA_00600	Telomerase-vert links to Rfam database...	0.26	0.30	0.23	30	120165	121	30	70	21	70
RFA_00601	Telomerase-vert links to Rfam database...	0.51	0.54	0.50	61	99112	81	10	52	19	53
RFA_00602	Telomerase-vert links to Rfam database...	0.50	0.53	0.47	61	101346	90	13	55	22	55
RFA_00632	HDV_ribozyme links to Rfam database...	0.37	0.36	0.38	10	4069	19	0	16	3	18
RFA_00636	HDV_ribozyme links to Rfam database...	0.51	0.50	0.52	14	3978	13	3	10	0	14
RFA_00767	Corona_pk3 links to Rfam database...	0.59	0.56	0.63	10	1875	6	3	3	0	8
RFA_00768	Corona_pk3 links to Rfam database...	0.47	0.44	0.50	8	1875	8	1	7	0	10
RFA_00769	Corona_pk3 links to Rfam database...	0.54	0.56	0.53	10	1934	9	4	5	0	8
RFA_00770	Corona_pk3 links to Rfam database...	-0.01	0.00	0.00	0	2002	17	1	13	3	18
RFA_00773	Corona_pk3 links to Rfam database...	0.59	0.56	0.63	10	1937	6	1	5	0	8
RFA_00779	Corona_pk3 links to Rfam database...	0.59	0.56	0.63	10	1937	6	3	3	0	8
RFA_00808	RydC links to Rfam database...	-0.01	0.00	0.00	0	2000	18	2	14	2	16
RFA_00809	RydC links to Rfam database...	0.40	0.38	0.43	6	2131	8	1	7	0	10
TMR_00007	tmRNA links to Rfam database...	0.33	0.32	0.33	35	61671	74	8	62	4	73
TMR_00008	tmRNA links to Rfam database...	0.44	0.45	0.43	48	65955	71	13	50	8	58
TMR_00010	tmRNA links to Rfam database...	0.24	0.25	0.23	24	57866	86	14	66	6	72
TMR_00012	tmRNA links to Rfam database...	0.39	0.42	0.37	34	64528	74	20	38	16	47
TMR_00014	tmRNA links to Rfam database...	0.57	0.55	0.60	60	68535	48	5	35	8	50
TMR_00017	tmRNA links to Rfam database...	0.49	0.47	0.51	48	67067	52	11	35	6	54
TMR_00018	tmRNA links to Rfam database...	0.58	0.60	0.57	55	64523	47	13	29	5	37
TMR_00028	tmRNA links to Rfam database...	0.20	0.22	0.19	21	62727	88	13	74	1	76
TMR_00030	tmRNA links to Rfam database...	0.20	0.21	0.20	23	75739	96	19	74	3	88
TMR_00034	tmRNA links to Rfam database...	0.61	0.60	0.62	66	59924	47	11	30	6	44
TMR_00035	tmRNA links to Rfam database...	0.36	0.38	0.35	37	67790	77	9	60	8	61
TMR_00036	tmRNA links to Rfam database...	0.57	0.58	0.56	59	90420	75	9	37	29	42
TMR_00038	tmRNA links to Rfam database...	0.18	0.19	0.18	21	71137	101	12	83	6	89
TMR_00042	tmRNA links to Rfam database...	0.32	0.32	0.32	31	62739	68	8	57	3	67
TMR_00046	tmRNA links to Rfam database...	0.42	0.43	0.41	41	62736	64	12	46	6	55
TMR_00047	tmRNA links to Rfam database...	0.29	0.33	0.25	19	48439	72	17	41	14	38
TMR_00048	tmRNA links to Rfam database...	0.13	0.14	0.13	13	64876	98	11	80	7	82
TMR_00049	tmRNA links to Rfam database...	0.35	0.36	0.35	31	63102	70	7	50	13	56
TMR_00051	tmRNA links to Rfam database...	0.53	0.51	0.56	48	65617	56	5	33	18	46
TMR_00055	tmRNA links to Rfam database...	0.49	0.48	0.50	55	78892	60	9	47	4	59
TMR_00057	tmRNA links to Rfam database...	0.14	0.16	0.12	13	73810	104	28	69	7	66
TMR_00061	tmRNA links to Rfam database...	0.21	0.21	0.21	21	59587	85	8	69	8	78
TMR_00062	tmRNA links to Rfam database...	0.62	0.64	0.60	67	78494	58	14	31	13	37
TMR_00064	tmRNA links to Rfam database...	0.25	0.26	0.23	27	76912	90	21	68	1	76
TMR_00065	tmRNA links to Rfam database...	0.37	0.40	0.35	42	76517	79	22	55	2	64
TMR_00067	tmRNA links to Rfam database...	0.30	0.31	0.29	35	82093	87	16	71	0	79
TMR_00073	tmRNA links to Rfam database...	0.18	0.18	0.18	21	65588	94	8	86	0	96
TMR_00076	tmRNA links to Rfam database...	0.43	0.45	0.42	45	70769	67	12	50	5	55
TMR_00080	tmRNA links to Rfam database...	0.25	0.26	0.24	25	70396	79	21	58	0	71
TMR_00081	tmRNA links to Rfam database...	0.25	0.25	0.25	27	67054	80	17	63	0	79
TMR_00082	tmRNA links to Rfam database...	0.22	0.22	0.21	21	67798	83	19	58	6	75
TMR_00083	tmRNA links to Rfam database...	0.39	0.39	0.40	41	68162	70	5	57	8	64
TMR_00092	tmRNA links to Rfam database...	0.56	0.58	0.54	59	67418	57	13	38	6	42
TMR_00093	tmRNA links to Rfam database...	0.49	0.51	0.48	52	64153	59	12	44	3	50
TMR_00096	tmRNA links to Rfam database...	0.38	0.39	0.38	39	64877	72	11	53	8	61
TMR_00101	tmRNA links to Rfam database...	0.44	0.44	0.44	47	64154	66	9	51	6	60
TMR_00102	tmRNA links to Rfam database...	0.27	0.29	0.26	29	64148	85	22	62	1	72
TMR_00103	tmRNA links to Rfam database...	0.61	0.63	0.59	68	64146	48	15	32	1	40
TMR_00104	-	0.06	0.07	0.05	5	66702	97	32	56	9	65
TMR_00106	tmRNA links to Rfam database...	0.33	0.34	0.32	41	89973	89	24	62	3	79
TMR_00109	tmRNA links to Rfam database...	0.22	0.22	0.23	27	88291	99	18	74	7	95
TMR_00111	tmRNA links to Rfam database...	0.36	0.36	0.37	44	90405	84	14	62	8	78
TMR_00116	tmRNA links to Rfam database...	0.68	0.66	0.70	69	64881	43	6	24	13	35
TMR_00117	tmRNA links to Rfam database...	0.56	0.57	0.55	67	80079	59	15	39	5	51
TMR_00118	tmRNA links to Rfam database...	0.14	0.14	0.14	17	81287	108	16	86	6	103
TMR_00119	tmRNA links to Rfam database...	0.49	0.49	0.49	51	71905	59	13	41	5	53
TMR_00123	tmRNA links to Rfam database...	0.60	0.58	0.63	59	66336	40	6	29	5	42
TMR_00124	tmRNA links to Rfam database...	0.38	0.40	0.37	39	70395	74	19	47	8	59
TMR_00125	tmRNA links to Rfam database...	0.19	0.20	0.19	20	64153	90	17	71	2	79
TMR_00127	tmRNA links to Rfam database...	0.48	0.47	0.48	46	62740	55	5	44	6	51
TMR_00128	tmRNA links to Rfam database...	0.23	0.24	0.22	23	60970	88	14	68	6	73
TMR_00131	tmRNA links to Rfam database...	0.27	0.27	0.27	27	64881	80	14	58	8	72
TMR_00135	tmRNA links to Rfam database...	0.33	0.34	0.31	34	62726	77	21	54	2	65
TMR_00136	tmRNA links to Rfam database...	0.15	0.17	0.14	17	74570	104	23	81	0	84
TMR_00137	tmRNA links to Rfam database...	0.26	0.27	0.25	24	60978	77	17	56	4	65
TMR_00139	tmRNA links to Rfam database...	0.06	0.07	0.05	6	62015	111	25	82	4	85
TMR_00140	tmRNA links to Rfam database...	0.27	0.28	0.27	28	73815	92	6	71	15	72
TMR_00142	tmRNA links to Rfam database...	0.45	0.46	0.45	47	70771	69	16	42	11	55
TMR_00143	tmRNA links to Rfam database...	0.47	0.46	0.48	47	64523	60	8	42	10	56
TMR_00144	tmRNA links to Rfam database...	0.27	0.28	0.25	29	74191	88	18	67	3	74
TMR_00146	tmRNA links to Rfam database...	0.79	0.86	0.73	36	32082	43	9	4	30	6
TMR_00150	tmRNA links to Rfam database...	0.78	0.79	0.77	33	43028	51	3	7	41	9
TMR_00152	tmRNA links to Rfam database...	0.24	0.24	0.24	28	81288	100	11	79	10	87
TMR_00155	tmRNA links to Rfam database...	0.54	0.53	0.56	55	61678	52	7	36	9	49
TMR_00156	tmRNA links to Rfam database...	0.19	0.20	0.19	19	60280	84	11	68	5	78
TMR_00158	tmRNA links to Rfam database...	0.44	0.43	0.45	43	60630	58	9	44	5	56
TMR_00159	tmRNA links to Rfam database...	0.31	0.33	0.30	30	62029	80	14	55	11	62
TMR_00160	tmRNA links to Rfam database...	0.25	0.26	0.24	25	64516	79	13	66	0	70
TMR_00164	tmRNA links to Rfam database...	0.42	0.41	0.43	43	66696	64	6	50	8	63
TMR_00165	tmRNA links to Rfam database...	0.32	0.33	0.31	32	61673	80	12	59	9	65
TMR_00166	tmRNA links to Rfam database...	0.16	0.17	0.16	17	61672	90	10	77	3	84
TMR_00168	tmRNA links to Rfam database...	0.72	0.69	0.75	79	60970	30	0	26	4	35
TMR_00173	tmRNA links to Rfam database...	0.29	0.36	0.24	15	42133	75	20	27	28	27
TMR_00179	tmRNA links to Rfam database...	0.18	0.18	0.18	18	67060	91	18	65	8	80
TMR_00180	tmRNA links to Rfam database...	0.63	0.64	0.62	63	67059	50	11	28	11	36
TMR_00182	tmRNA links to Rfam database...	0.40	0.41	0.40	42	66325	68	8	55	5	60
TMR_00183	tmRNA links to Rfam database...	0.17	0.17	0.17	18	63084	93	10	78	5	85
TMR_00184	tmRNA links to Rfam database...	0.40	0.41	0.39	42	63081	69	6	61	2	60
TMR_00193	tmRNA links to Rfam database...	0.26	0.26	0.25	21	59256	70	19	44	7	59
TMR_00194	tmRNA links to Rfam database...	0.26	0.27	0.25	25	62735	78	16	59	3	68
TMR_00196	tmRNA links to Rfam database...	0.30	0.31	0.29	30	60972	73	18	55	0	67
TMR_00199	tmRNA links to Rfam database...	0.52	0.53	0.51	49	62739	54	13	34	7	43
TMR_00200	-	0.34	0.35	0.34	26	41539	60	4	47	9	49
TMR_00204	tmRNA links to Rfam database...	0.42	0.41	0.44	40	60287	60	16	35	9	57
TMR_00207	tmRNA links to Rfam database...	0.30	0.31	0.30	32	72282	83	7	69	7	71
TMR_00223	tmRNA links to Rfam database...	0.38	0.39	0.38	37	64164	64	13	47	4	58
TMR_00224	tmRNA links to Rfam database...	0.39	0.38	0.40	38	64886	62	9	47	6	63
TMR_00226	tmRNA links to Rfam database...	0.25	0.26	0.24	27	69639	90	15	70	5	78
TMR_00227	tmRNA links to Rfam database...	0.33	0.35	0.31	35	70011	82	19	60	3	66
TMR_00228	tmRNA links to Rfam database...	0.29	0.31	0.27	34	88286	95	24	66	5	74
TMR_00234	tmRNA links to Rfam database...	0.31	0.32	0.30	33	58885	80	11	67	2	69
TMR_00238	tmRNA links to Rfam database...	0.23	0.25	0.21	25	84548	99	20	73	6	76
TMR_00239	tmRNA links to Rfam database...	0.48	0.49	0.47	47	61677	54	10	42	2	49
TMR_00240	tmRNA links to Rfam database...	0.22	0.25	0.21	21	63088	84	23	58	3	64
TMR_00246	-	0.46	0.50	0.41	17	78169	106	7	17	82	17
TMR_00248	tmRNA links to Rfam database...	0.12	0.16	0.10	6	54224	99	21	34	44	32
TMR_00257	tmRNA links to Rfam database...	0.51	0.52	0.50	51	67058	57	10	42	5	47
TMR_00259	tmRNA links to Rfam database...	0.33	0.32	0.35	33	67801	69	11	51	7	70
TMR_00261	tmRNA links to Rfam database...	0.57	0.59	0.55	60	66685	53	17	33	3	41
TMR_00262	tmRNA links to Rfam database...	0.54	0.56	0.53	58	74195	58	14	38	6	46
TMR_00271	tmRNA links to Rfam database...	0.32	0.33	0.32	30	64166	73	10	55	8	61
TMR_00274	tmRNA links to Rfam database...	0.30	0.30	0.29	32	66684	84	14	65	5	73
TMR_00278	tmRNA links to Rfam database...	0.50	0.52	0.49	53	67788	65	9	46	10	49
TMR_00279	tmRNA links to Rfam database...	0.57	0.56	0.57	53	68913	50	5	35	10	41
TMR_00280	tmRNA links to Rfam database...	0.55	0.56	0.54	57	65961	63	3	45	15	44
TMR_00283	tmRNA links to Rfam database...	0.37	0.40	0.34	38	65230	76	18	55	3	58
TMR_00289	tmRNA links to Rfam database...	0.56	0.57	0.54	56	67058	58	14	33	11	42
TMR_00290	tmRNA links to Rfam database...	0.54	0.54	0.54	50	64168	49	12	31	6	42
TMR_00296	tmRNA links to Rfam database...	0.49	0.49	0.48	48	68907	62	11	40	11	50
TMR_00298	tmRNA links to Rfam database...	0.39	0.40	0.38	40	68160	71	11	54	6	61
TMR_00300	tmRNA links to Rfam database...	0.66	0.69	0.64	77	70379	47	12	32	3	35
TMR_00301	tmRNA links to Rfam database...	0.22	0.24	0.20	23	82102	90	20	70	0	73
TMR_00302	tmRNA links to Rfam database...	0.26	0.29	0.23	27	77305	98	24	65	9	67
TMR_00305	tmRNA links to Rfam database...	0.47	0.48	0.46	49	60969	57	16	41	0	53
TMR_00306	tmRNA links to Rfam database...	0.24	0.25	0.23	26	64147	88	19	69	0	80
TMR_00310	tmRNA links to Rfam database...	0.57	0.55	0.60	54	63813	48	6	30	12	44
TMR_00317	tmRNA links to Rfam database...	0.55	0.58	0.52	59	68151	58	15	40	3	43
TMR_00331	tmRNA links to Rfam database...	0.30	0.33	0.27	27	66695	84	10	63	11	55
TMR_00332	tmRNA links to Rfam database...	0.31	0.31	0.31	31	67062	76	14	54	8	68
TMR_00334	tmRNA links to Rfam database...	0.43	0.42	0.45	42	66701	61	5	47	9	59
TMR_00337	tmRNA links to Rfam database...	0.12	0.13	0.12	15	82902	111	14	97	0	104
TMR_00340	tmRNA links to Rfam database...	0.47	0.48	0.47	39	64178	66	7	37	22	42
TMR_00341	tmRNA links to Rfam database...	0.20	0.22	0.19	20	63086	90	18	66	6	72
TMR_00343	tmRNA links to Rfam database...	0.39	0.40	0.39	42	64872	66	9	57	0	63
TMR_00345	tmRNA links to Rfam database...	0.54	0.52	0.56	54	63806	50	5	38	7	50
TMR_00346	tmRNA links to Rfam database...	0.48	0.48	0.47	45	64166	59	4	46	9	49
TMR_00348	tmRNA links to Rfam database...	0.14	0.14	0.14	14	77320	104	17	70	17	85
TMR_00352	tmRNA links to Rfam database...	0.23	0.25	0.20	19	95172	114	24	51	39	56
TMR_00353	tmRNA links to Rfam database...	0.52	0.52	0.52	55	84149	64	12	39	13	50
TMR_00357	tmRNA links to Rfam database...	0.50	0.54	0.47	50	82921	72	21	36	15	42
TMR_00358	tmRNA links to Rfam database...	0.42	0.45	0.39	45	74964	76	26	43	7	54
TMR_00361	-	0.36	0.43	0.30	31	93425	89	27	45	17	41
TMR_00366	tmRNA links to Rfam database...	0.28	0.29	0.27	29	67789	85	19	59	7	71
TMR_00372	tmRNA links to Rfam database...	0.52	0.53	0.50	51	70399	64	8	42	14	45
TMR_00374	tmRNA links to Rfam database...	0.12	0.13	0.11	12	81704	112	27	67	18	80
TMR_00375	tmRNA links to Rfam database...	0.44	0.48	0.41	47	73422	72	20	47	5	51
TMR_00376	tmRNA links to Rfam database...	0.49	0.51	0.48	48	74590	71	13	40	18	47
TMR_00378	tmRNA links to Rfam database...	0.33	0.34	0.32	33	67792	78	13	58	7	64
TMR_00383	tmRNA links to Rfam database...	0.18	0.19	0.17	19	66685	93	14	77	2	81
TMR_00384	tmRNA links to Rfam database...	0.51	0.50	0.52	54	65600	54	5	44	5	54
TMR_00393	tmRNA links to Rfam database...	0.65	0.68	0.62	36	53243	57	8	14	35	17
TMR_00395	tmRNA links to Rfam database...	0.36	0.36	0.36	39	64513	70	7	61	2	70
TMR_00398	tmRNA links to Rfam database...	0.36	0.35	0.37	37	65240	68	4	60	4	69
TMR_00399	tmRNA links to Rfam database...	0.18	0.19	0.17	18	64876	88	17	69	2	76
TMR_00404	tmRNA links to Rfam database...	0.20	0.22	0.18	20	67418	93	24	66	3	72
TMR_00408	tmRNA links to Rfam database...	0.39	0.42	0.36	37	65964	74	24	41	9	51
TMR_00409	tmRNA links to Rfam database...	0.54	0.65	0.45	30	68569	87	14	22	51	16
TMR_00411	tmRNA links to Rfam database...	0.18	0.18	0.17	16	60981	91	18	60	13	71
TMR_00415	tmRNA links to Rfam database...	0.65	0.62	0.67	63	67067	35	5	26	4	38
TMR_00419	tmRNA links to Rfam database...	0.18	0.19	0.18	21	81694	101	12	83	6	90
TMR_00422	tmRNA links to Rfam database...	0.27	0.29	0.26	27	67792	87	18	59	10	65
TMR_00423	tmRNA links to Rfam database...	0.17	0.19	0.15	14	63810	94	19	60	15	59
TMR_00427	tmRNA links to Rfam database...	0.16	0.16	0.15	16	67421	96	15	76	5	81
TMR_00429	tmRNA links to Rfam database...	0.39	0.39	0.39	43	74580	78	10	58	10	66
TMR_00430	tmRNA links to Rfam database...	0.21	0.22	0.20	24	82500	100	25	72	3	85
TMR_00431	tmRNA links to Rfam database...	0.64	0.69	0.59	38	51939	56	15	11	30	17
TMR_00432	tmRNA links to Rfam database...	0.21	0.22	0.19	23	79682	102	13	82	7	81
TMR_00433	tmRNA links to Rfam database...	0.45	0.47	0.43	50	80083	68	18	49	1	56
TMR_00439	tmRNA links to Rfam database...	0.29	0.31	0.27	31	68522	86	15	67	4	70
TMR_00441	tmRNA links to Rfam database...	0.12	0.13	0.10	11	62021	99	26	70	3	72
TMR_00443	tmRNA links to Rfam database...	0.41	0.42	0.41	44	67053	72	15	49	8	60
TMR_00448	tmRNA links to Rfam database...	0.49	0.47	0.51	43	62043	50	6	36	8	49
TMR_00451	tmRNA links to Rfam database...	0.26	0.27	0.26	24	63454	75	9	59	7	65
TMR_00457	tmRNA links to Rfam database...	0.35	0.35	0.34	36	78500	78	8	62	8	66
TMR_00458	tmRNA links to Rfam database...	0.10	0.11	0.10	10	63450	94	8	78	8	83
TMR_00460	tmRNA links to Rfam database...	0.38	0.39	0.37	41	79289	76	11	60	5	65
TMR_00465	tmRNA links to Rfam database...	0.26	0.28	0.24	26	64154	81	22	59	0	68
TMR_00469	tmRNA links to Rfam database...	0.41	0.43	0.39	43	64511	66	15	51	0	57
TMR_00472	tmRNA links to Rfam database...	0.30	0.32	0.28	31	64509	82	20	60	2	66
TMR_00478	tmRNA links to Rfam database...	0.21	0.23	0.20	23	71895	95	15	77	3	76
TMR_00498	tmRNA links to Rfam database...	0.17	0.18	0.16	18	68894	100	17	77	6	81
TMR_00499	tmRNA links to Rfam database...	0.35	0.36	0.34	36	64513	78	8	63	7	63
TMR_00501	tmRNA links to Rfam database...	0.43	0.45	0.41	41	62382	63	8	50	5	51
TMR_00502	tmRNA links to Rfam database...	0.21	0.24	0.19	22	75350	98	20	74	4	71
TMR_00503	tmRNA links to Rfam database...	0.39	0.39	0.40	43	67788	73	6	59	8	68
TMR_00519	tmRNA links to Rfam database...	0.13	0.14	0.12	13	63083	94	17	77	0	82
TMR_00520	tmRNA links to Rfam database...	0.23	0.23	0.23	23	63088	87	8	71	8	76
TMR_00522	tmRNA links to Rfam database...	0.07	0.07	0.07	7	63085	104	14	84	6	90
TMR_00528	tmRNA links to Rfam database...	0.26	0.26	0.27	25	63096	77	16	53	8	72
TMR_00540	tmRNA links to Rfam database...	0.36	0.37	0.36	38	73429	70	18	51	1	66
TMR_00541	tmRNA links to Rfam database...	0.48	0.49	0.48	51	61670	65	5	50	10	54
TMR_00544	tmRNA links to Rfam database...	0.47	0.47	0.47	51	89568	71	17	40	14	57
TMR_00547	tmRNA links to Rfam database...	0.44	0.45	0.44	45	65238	58	9	49	0	55
TMR_00553	tmRNA links to Rfam database...	0.38	0.40	0.36	32	48116	57	22	35	0	49
TMR_00559	tmRNA links to Rfam database...	0.44	0.45	0.44	45	62379	62	11	46	5	56
TMR_00560	tmRNA links to Rfam database...	0.50	0.50	0.51	49	60979	54	4	43	7	49
TMR_00562	tmRNA links to Rfam database...	0.43	0.43	0.43	44	72668	66	15	44	7	58
TMR_00563	tmRNA links to Rfam database...	0.26	0.28	0.25	29	75348	93	21	68	4	74
TMR_00566	tmRNA links to Rfam database...	0.23	0.24	0.23	24	60622	84	15	65	4	76
TMR_00568	tmRNA links to Rfam database...	0.36	0.37	0.36	37	60622	72	15	52	5	62
TMR_00570	tmRNA links to Rfam database...	0.50	0.49	0.51	48	60284	54	7	39	8	49
TMR_00571	tmRNA links to Rfam database...	0.50	0.49	0.52	49	60631	55	6	40	9	50
TMR_00576	tmRNA links to Rfam database...	0.45	0.46	0.45	47	60273	65	12	46	7	55
TMR_00579	tmRNA links to Rfam database...	0.20	0.23	0.18	21	80484	101	22	74	5	69
TMR_00580	tmRNA links to Rfam database...	0.27	0.26	0.28	26	60633	75	6	61	8	74
TMR_00581	tmRNA links to Rfam database...	0.29	0.30	0.29	29	62380	78	12	60	6	69
TMR_00584	tmRNA links to Rfam database...	0.55	0.58	0.53	56	60969	53	10	40	3	41
TMR_00586	tmRNA links to Rfam database...	0.27	0.27	0.27	26	60978	76	12	59	5	71
TMR_00587	tmRNA links to Rfam database...	0.74	0.74	0.74	74	61325	31	7	19	5	26
TMR_00588	tmRNA links to Rfam database...	0.28	0.29	0.27	29	77315	87	14	63	10	72
TMR_00594	tmRNA links to Rfam database...	0.35	0.37	0.34	38	79289	76	18	56	2	66
TMR_00596	tmRNA links to Rfam database...	0.22	0.23	0.20	22	78102	92	22	64	6	73
TMR_00599	tmRNA links to Rfam database...	0.20	0.25	0.17	18	63083	90	37	52	1	54
TMR_00600	tmRNA links to Rfam database...	0.40	0.39	0.41	45	79691	67	4	60	3	70
TMR_00601	tmRNA links to Rfam database...	0.14	0.17	0.13	7	58940	96	11	38	47	35
TMR_00603	tmRNA links to Rfam database...	0.55	0.58	0.52	25	60330	84	4	19	61	18
TMR_00604	tmRNA links to Rfam database...	0.65	0.63	0.66	71	62728	40	2	34	4	41
TMR_00605	tmRNA links to Rfam database...	0.37	0.40	0.35	43	74183	82	20	59	3	65
TMR_00606	tmRNA links to Rfam database...	0.51	0.50	0.51	54	68900	60	8	44	8	53
TMR_00609	tmRNA links to Rfam database...	0.63	0.64	0.63	72	63431	43	17	26	0	41
TMR_00610	tmRNA links to Rfam database...	0.54	0.54	0.54	56	62025	58	9	38	11	48
TMR_00611	tmRNA links to Rfam database...	0.64	0.67	0.61	68	61314	47	8	35	4	34
TMR_00612	tmRNA links to Rfam database...	0.46	0.46	0.45	48	60620	62	6	52	4	56
TMR_00614	tmRNA links to Rfam database...	0.30	0.30	0.30	31	60972	78	10	62	6	73
TMR_00615	tmRNA links to Rfam database...	0.55	0.59	0.52	57	63793	56	19	34	3	39
TMR_00616	tmRNA links to Rfam database...	0.42	0.43	0.40	43	67054	70	10	54	6	56
TMR_00617	tmRNA links to Rfam database...	0.30	0.34	0.26	20	34638	61	18	40	3	38
TMR_00623	tmRNA links to Rfam database...	0.39	0.37	0.41	40	61328	64	2	55	7	68
TMR_00624	tmRNA links to Rfam database...	0.58	0.57	0.58	62	62374	51	9	36	6	46
TMR_00625	tmRNA links to Rfam database...	0.23	0.25	0.22	26	78883	98	25	69	4	80
TMR_00626	tmRNA links to Rfam database...	0.45	0.47	0.44	51	67779	69	16	50	3	58
TMR_00680	tmRNA links to Rfam database...	0.24	0.25	0.23	25	67787	89	16	68	5	74
TMR_00681	tmRNA links to Rfam database...	0.62	0.63	0.60	61	65965	50	7	33	10	36
TMR_00683	tmRNA links to Rfam database...	0.11	0.12	0.10	12	82902	120	29	85	6	88
TMR_00686	tmRNA links to Rfam database...	0.31	0.32	0.29	35	71133	96	17	68	11	73
TMR_00687	tmRNA links to Rfam database...	0.35	0.36	0.35	40	71516	76	13	62	1	71
TMR_00696	tmRNA links to Rfam database...	0.55	0.55	0.56	63	84965	68	9	41	18	51
TMR_00698	tmRNA links to Rfam database...	0.32	0.34	0.32	35	63079	76	20	56	0	69
TMR_00699	tmRNA links to Rfam database...	0.45	0.45	0.44	46	67057	58	10	48	0	56
TMR_00702	tmRNA links to Rfam database...	0.32	0.32	0.33	32	67063	70	8	58	4	68
TMR_00703	tmRNA links to Rfam database...	0.41	0.41	0.41	41	67427	62	9	51	2	58
TMR_00706	tmRNA links to Rfam database...	0.49	0.49	0.50	50	66329	55	4	47	4	53
TMR_00711	tmRNA links to Rfam database...	0.55	0.58	0.53	57	67788	57	15	36	6	41
TMR_00712	tmRNA links to Rfam database...	0.12	0.13	0.11	14	78482	112	29	81	2	95
TMR_00716	tmRNA links to Rfam database...	0.12	0.12	0.11	12	62730	101	9	84	8	88

^top

Matthews Correlation Coeffient, Sensitivity and Positive Predictive Value have been calculated based on the paper by Gardener & Giegerich, 2004.

Table of contents:

Overview

Performance plots

Performance of MaxExpect - scored higher in this pairwise comparison

1. Total counts & total scores for MaxExpect

2. Individual counts for MaxExpect [ download as .csv ]

Performance of CRWrnafold - scored lower in this pairwise comparison

1. Total counts & total scores for CRWrnafold

2. Individual counts for CRWrnafold [ download as .csv ]