CompaRNA - on-line benchmarks of RNA structure prediction methods

Laboratory of Structural Bioinformatics @ Adam Mickiewicz University in Poznan

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Overview

Metric	McQFold		CRWrnafold
MCC	0.450	>	0.414
Average MCC ± 95% Confidence Intervals	0.470 ± 0.015	>	0.418 ± 0.014
Sensitivity	0.440	>	0.417
Positive Predictive Value	0.461	>	0.412
Total TP	28704	>	27194
Total TN	45992856	>	45989059
Total FP	38288	<	44217
Total FP CONTRA	5728	<	6703
Total FP INCONS	27821	<	32153
Total FP COMP	4739	<	5361
Total FN	36514	<	38024
P-value	3.56938820447e-08

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Performance plots

Comparison of performance of McQFold and CRWrnafold. Positive Predictive Value (PPV) is plotted against sensitivity. Each dot represents a single test of each method. See tables below for raw data (individual counts for McQFold and CRWrnafold).
Average Matthews Correlation Coefficients (MCC) with 95% confidence intervals (CIs) were plotted for different RNA families, for which at least 3 members were present in the benchmarking dataset. 'n' denotes the number of MCCs used to calculate the average and CI. See tables below for raw data (individual counts for McQFold and CRWrnafold).
Comparison of average Matthews Correlation Coefficients (MCCs) for McQFold and CRWrnafold. The whiskers correspond to 95% confidence intervals (CIs). 'n' denotes the number of MCCs used to calculate average MCCs and CIs. See tables below for raw data (individual counts for McQFold and CRWrnafold).

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Performance of McQFold - scored higher in this pairwise comparison

1. Total counts & total scores for McQFold

Total Base Pair Counts
Total TP	28704
Total TN	45992856
Total FP	38288
Total FP CONTRA	5728
Total FP INCONS	27821
Total FP COMP	4739
Total FN	36514

Total Scores
MCC	0.450
Average MCC ± 95% Confidence Intervals	0.470 ± 0.015
Sensitivity	0.440
Positive Predictive Value	0.461
Nr of predictions	669

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2. Individual counts for McQFold [ download as .csv ]

RNA Chain	Rfam family	MCC	SENS	PPV	TP	TN	FP	FP CONTRA	FP INCONS	FP COMP	FN
ASE_00001	RNaseP_arch links to Rfam database...	0.78	0.73	0.82	55	34124	17	7	5	5	20
ASE_00002	RNaseP_arch links to Rfam database...	0.80	0.75	0.86	55	35447	12	4	5	3	18
ASE_00004	RNaseP_bact_a links to Rfam database...	0.50	0.48	0.52	47	47805	48	9	34	5	50
ASE_00005	RNaseP_bact_a links to Rfam database...	0.52	0.46	0.59	54	57878	40	0	38	2	63
ASE_00006	RNaseP_bact_a links to Rfam database...	0.35	0.34	0.36	32	47498	60	6	50	4	61
ASE_00007	RNaseP_bact_a links to Rfam database...	0.42	0.39	0.46	43	59591	55	2	49	4	67
ASE_00009	RNaseP_arch links to Rfam database...	0.67	0.64	0.70	43	26045	18	3	15	0	24
ASE_00012	RNaseP_bact_a links to Rfam database...	0.42	0.39	0.46	48	73816	61	3	53	5	75
ASE_00014	RNaseP_arch links to Rfam database...	0.47	0.47	0.48	50	54180	56	9	46	1	56
ASE_00017	RNaseP_nuc links to Rfam database...	0.18	0.20	0.17	13	50963	78	25	39	14	51
ASE_00018	RNaseP_bact_a links to Rfam database...	0.54	0.51	0.57	68	80482	52	2	49	1	66
ASE_00020	RNaseP_bact_a links to Rfam database...	0.47	0.47	0.48	59	73797	64	9	55	0	67
ASE_00021	RNaseP_bact_a links to Rfam database...	0.60	0.54	0.67	86	104068	47	2	40	5	74
ASE_00022	RNaseP_bact_b links to Rfam database...	0.60	0.56	0.65	70	82920	45	5	33	7	54
ASE_00023	RNaseP_bact_a links to Rfam database...	0.57	0.57	0.58	72	84131	57	6	46	5	55
ASE_00025	RNaseP_nuc links to Rfam database...	0.36	0.37	0.35	26	78531	92	6	43	43	45
ASE_00026	RNaseP_bact_a links to Rfam database...	0.34	0.31	0.38	34	59595	58	7	49	2	76
ASE_00028	RNaseP_bact_b links to Rfam database...	0.56	0.54	0.59	68	84550	50	11	37	2	58
ASE_00029	RNaseP_bact_a links to Rfam database...	0.53	0.49	0.58	60	82924	48	3	41	4	62
ASE_00030	RNaseP_bact_a links to Rfam database...	0.59	0.56	0.62	81	85360	51	6	44	1	64
ASE_00031	RNaseP_bact_a links to Rfam database...	0.54	0.50	0.58	63	86627	56	5	41	10	63
ASE_00032	RNaseP_bact_a links to Rfam database...	0.61	0.58	0.64	69	80093	39	12	26	1	49
ASE_00033	RNaseP_bact_a links to Rfam database...	0.38	0.34	0.42	41	64883	57	3	53	1	80
ASE_00035	RNaseP_bact_a links to Rfam database...	0.29	0.27	0.32	32	70401	71	9	58	4	86
ASE_00036	RNaseP_bact_a links to Rfam database...	0.48	0.45	0.50	60	75736	64	8	51	5	72
ASE_00037	RNaseP_bact_a links to Rfam database...	0.42	0.38	0.46	42	59248	50	5	45	0	68
ASE_00038	RNaseP_bact_a links to Rfam database...	0.41	0.39	0.43	39	53538	53	3	48	2	62
ASE_00040	RNaseP_bact_a links to Rfam database...	0.27	0.26	0.29	34	78886	88	9	74	5	99
ASE_00041	RNaseP_bact_a links to Rfam database...	0.46	0.43	0.51	46	57539	48	6	39	3	62
ASE_00042	RNaseP_bact_a links to Rfam database...	0.56	0.53	0.60	77	89972	53	4	47	2	68
ASE_00044	RNaseP_bact_a links to Rfam database...	0.78	0.76	0.80	80	54515	25	4	16	5	25
ASE_00046	RNaseP_bact_a links to Rfam database...	0.57	0.51	0.63	53	50319	32	3	28	1	50
ASE_00047	RNaseP_bact_a links to Rfam database...	0.46	0.42	0.50	54	74198	54	3	50	1	76
ASE_00052	RNaseP_bact_a links to Rfam database...	0.44	0.42	0.46	47	61323	59	9	46	4	65
ASE_00053	RNaseP_bact_a links to Rfam database...	0.56	0.55	0.57	73	79274	62	9	45	8	60
ASE_00056	-	0.43	0.43	0.42	31	30803	47	5	37	5	41
ASE_00057	RNaseP_bact_a links to Rfam database...	0.55	0.52	0.58	70	82095	57	13	37	7	64
ASE_00064	RNaseP_bact_a links to Rfam database...	0.50	0.49	0.51	44	45364	46	5	38	3	45
ASE_00066	RNaseP_bact_a links to Rfam database...	0.35	0.32	0.39	41	72286	64	3	60	1	89
ASE_00068	RNaseP_bact_a links to Rfam database...	0.70	0.60	0.82	51	37613	16	2	9	5	34
ASE_00069	RNaseP_bact_a links to Rfam database...	0.53	0.50	0.56	70	82902	60	6	50	4	70
ASE_00074	RNaseP_bact_a links to Rfam database...	0.42	0.40	0.44	48	67786	62	3	59	0	71
ASE_00075	RNaseP_bact_a links to Rfam database...	0.51	0.46	0.57	74	108681	62	4	52	6	88
ASE_00076	RNaseP_bact_a links to Rfam database...	0.51	0.47	0.56	56	68165	46	2	42	2	62
ASE_00077	RNaseP_bact_a links to Rfam database...	0.42	0.40	0.45	34	45075	47	5	36	6	52
ASE_00078	RNaseP_bact_a links to Rfam database...	0.55	0.52	0.58	43	42997	38	2	29	7	40
ASE_00079	RNaseP_bact_a links to Rfam database...	0.55	0.52	0.59	52	55523	39	5	31	3	48
ASE_00080	RNaseP_bact_a links to Rfam database...	0.32	0.30	0.35	37	71524	71	6	64	1	86
ASE_00081	RNaseP_bact_a links to Rfam database...	0.31	0.29	0.34	28	49688	56	5	49	2	69
ASE_00082	RNaseP_bact_a links to Rfam database...	0.38	0.36	0.40	42	70396	73	2	60	11	74
ASE_00083	RNaseP_bact_a links to Rfam database...	0.25	0.25	0.26	27	62379	75	6	69	0	83
ASE_00084	RNaseP_bact_a links to Rfam database...	0.60	0.57	0.64	56	53540	36	2	30	4	43
ASE_00087	RNaseP_bact_a links to Rfam database...	0.49	0.42	0.57	61	88303	52	2	44	6	83
ASE_00089	-	0.21	0.20	0.22	16	31303	58	2	54	2	63
ASE_00090	RNaseP_bact_a links to Rfam database...	0.52	0.52	0.52	53	55510	52	6	42	4	48
ASE_00092	RNaseP_bact_a links to Rfam database...	0.46	0.44	0.49	50	63444	55	6	46	3	63
ASE_00096	RNaseP_bact_a links to Rfam database...	0.56	0.50	0.63	58	63454	35	2	32	1	57
ASE_00099	RNaseP_bact_a links to Rfam database...	0.58	0.56	0.61	67	64510	44	4	39	1	53
ASE_00100	RNaseP_nuc links to Rfam database...	0.32	0.33	0.31	25	82134	111	7	49	55	51
ASE_00102	RNaseP_bact_a links to Rfam database...	0.47	0.45	0.50	75	117705	78	5	70	3	91
ASE_00104	RNaseP_bact_a links to Rfam database...	0.53	0.52	0.55	62	64148	52	8	43	1	57
ASE_00105	RNaseP_bact_a links to Rfam database...	0.35	0.32	0.38	36	64165	64	2	58	4	75
ASE_00107	RNaseP_bact_a links to Rfam database...	0.56	0.53	0.59	67	73039	48	1	46	1	60
ASE_00108	RNaseP_nuc links to Rfam database...	0.33	0.38	0.29	24	46888	72	19	40	13	39
ASE_00111	RNaseP_nuc links to Rfam database...	0.34	0.42	0.27	24	49998	74	33	31	10	33
ASE_00112	RNaseP_bact_a links to Rfam database...	0.74	0.70	0.78	81	75362	33	2	21	10	35
ASE_00115	RNaseP_bact_a links to Rfam database...	0.61	0.57	0.64	58	54525	40	4	28	8	43
ASE_00116	RNaseP_arch links to Rfam database...	0.52	0.50	0.54	33	31565	32	3	25	4	33
ASE_00118	RNaseP_bact_a links to Rfam database...	0.39	0.37	0.40	38	60632	60	3	53	4	64
ASE_00119	RNaseP_bact_a links to Rfam database...	0.83	0.81	0.86	87	62734	14	2	12	0	21
ASE_00120	RNaseP_arch links to Rfam database...	0.47	0.46	0.49	43	46883	45	4	41	0	51
ASE_00121	RNaseP_arch links to Rfam database...	0.47	0.46	0.48	42	45063	47	7	38	2	50
ASE_00122	RNaseP_bact_a links to Rfam database...	0.70	0.67	0.73	59	43284	25	1	21	3	29
ASE_00123	RNaseP_bact_a links to Rfam database...	0.43	0.40	0.47	34	38430	45	0	39	6	51
ASE_00125	RNaseP_bact_a links to Rfam database...	0.43	0.38	0.49	33	39272	38	2	33	3	55
ASE_00126	RNaseP_bact_a links to Rfam database...	0.54	0.51	0.57	42	40396	33	3	29	1	40
ASE_00128	RNaseP_bact_a links to Rfam database...	0.43	0.39	0.48	39	53219	47	3	40	4	61
ASE_00129	RNaseP_bact_a links to Rfam database...	0.61	0.59	0.62	66	62729	42	3	37	2	45
ASE_00131	RNaseP_bact_a links to Rfam database...	0.37	0.33	0.42	28	39274	43	3	35	5	57
ASE_00132	RNaseP_bact_a links to Rfam database...	0.65	0.60	0.71	57	50323	24	4	19	1	38
ASE_00134	RNaseP_bact_a links to Rfam database...	0.33	0.32	0.35	30	50317	57	7	49	1	65
ASE_00135	RNaseP_bact_a links to Rfam database...	0.30	0.28	0.31	31	63090	74	3	66	5	78
ASE_00136	RNaseP_bact_a links to Rfam database...	0.67	0.64	0.71	59	48122	32	1	23	8	33
ASE_00137	RNaseP_bact_a links to Rfam database...	0.53	0.52	0.55	51	48423	45	5	37	3	47
ASE_00138	RNaseP_bact_a links to Rfam database...	0.56	0.51	0.63	41	40405	25	4	20	1	40
ASE_00139	RNaseP_bact_a links to Rfam database...	0.55	0.52	0.58	54	54192	42	1	38	3	50
ASE_00140	RNaseP_bact_a links to Rfam database...	0.53	0.49	0.57	61	70769	47	7	39	1	64
ASE_00142	RNaseP_bact_a links to Rfam database...	0.59	0.57	0.61	69	67048	47	5	39	3	53
ASE_00145	RNaseP_arch links to Rfam database...	0.52	0.50	0.54	56	70022	50	2	45	3	55
ASE_00146	RNaseP_bact_a links to Rfam database...	0.53	0.49	0.58	61	70770	48	1	44	3	63
ASE_00148	RNaseP_arch links to Rfam database...	0.64	0.62	0.66	96	112430	49	4	45	0	58
ASE_00151	RNaseP_bact_a links to Rfam database...	0.53	0.49	0.58	48	51920	39	9	26	4	50
ASE_00153	RNaseP_nuc links to Rfam database...	0.51	0.53	0.49	39	57550	72	9	32	31	34
ASE_00154	RNaseP_arch links to Rfam database...	0.62	0.61	0.64	65	65239	37	1	36	0	42
ASE_00155	RNaseP_arch links to Rfam database...	0.59	0.56	0.62	80	93398	54	3	47	4	62
ASE_00163	RNaseP_bact_a links to Rfam database...	0.41	0.40	0.42	37	53213	57	4	47	6	56
ASE_00165	RNaseP_bact_a links to Rfam database...	0.40	0.39	0.42	39	52882	56	6	48	2	62
ASE_00168	RNaseP_nuc links to Rfam database...	0.32	0.38	0.28	24	60640	89	18	44	27	40
ASE_00169	RNaseP_bact_a links to Rfam database...	0.43	0.38	0.48	41	57205	47	2	43	2	66
ASE_00170	RNaseP_bact_a links to Rfam database...	0.72	0.69	0.74	64	48742	24	2	20	2	29
ASE_00171	RNaseP_bact_a links to Rfam database...	0.52	0.50	0.55	47	48431	38	3	35	0	47
ASE_00172	RNaseP_bact_a links to Rfam database...	0.50	0.47	0.54	50	58903	50	5	38	7	56
ASE_00174	RNaseP_bact_a links to Rfam database...	0.44	0.41	0.46	45	60978	53	5	47	1	64
ASE_00175	RNaseP_bact_a links to Rfam database...	0.22	0.21	0.23	23	59931	80	5	72	3	84
ASE_00176	RNaseP_bact_a links to Rfam database...	0.65	0.59	0.71	65	59940	30	4	22	4	45
ASE_00179	RNaseP_bact_a links to Rfam database...	0.54	0.52	0.56	44	44174	36	8	27	1	40
ASE_00180	RNaseP_bact_a links to Rfam database...	0.42	0.41	0.42	41	51263	60	4	52	4	59
ASE_00181	RNaseP_bact_a links to Rfam database...	0.53	0.54	0.53	57	57522	51	4	47	0	49
ASE_00182	RNaseP_bact_a links to Rfam database...	0.45	0.40	0.50	55	84145	57	2	53	2	81
ASE_00183	RNaseP_bact_a links to Rfam database...	0.67	0.63	0.71	71	61325	36	0	29	7	42
ASE_00184	RNaseP_bact_a links to Rfam database...	0.52	0.51	0.54	52	54519	46	8	36	2	50
ASE_00185	RNaseP_bact_a links to Rfam database...	0.29	0.28	0.31	36	73419	81	14	67	0	92
ASE_00186	RNaseP_bact_a links to Rfam database...	0.55	0.51	0.59	67	78889	56	3	44	9	65
ASE_00187	RNaseP_arch links to Rfam database...	0.51	0.48	0.56	55	68536	48	3	41	4	60
ASE_00189	RNaseP_bact_b links to Rfam database...	0.54	0.54	0.55	55	63090	47	7	38	2	47
ASE_00190	RNaseP_bact_b links to Rfam database...	0.55	0.52	0.57	47	45369	40	2	33	5	43
ASE_00192	RNaseP_bact_b links to Rfam database...	0.47	0.45	0.49	60	84543	68	10	53	5	73
ASE_00194	RNaseP_bact_b links to Rfam database...	0.40	0.39	0.42	47	73423	67	15	51	1	72
ASE_00195	-	0.61	0.58	0.64	77	86200	46	8	35	3	56
ASE_00196	RNaseP_arch links to Rfam database...	0.78	0.75	0.81	56	31557	16	2	11	3	19
ASE_00197	RNaseP_bact_a links to Rfam database...	0.42	0.39	0.45	56	89129	76	1	67	8	89
ASE_00198	RNaseP_bact_a links to Rfam database...	0.50	0.46	0.55	47	52564	44	2	37	5	55
ASE_00203	RNaseP_bact_a links to Rfam database...	0.54	0.55	0.53	53	46565	51	4	43	4	43
ASE_00204	RNaseP_bact_b links to Rfam database...	0.53	0.49	0.58	55	67801	46	7	33	6	57
ASE_00205	RNaseP_arch links to Rfam database...	0.52	0.52	0.53	47	45967	45	10	32	3	43
ASE_00209	RNaseP_arch links to Rfam database...	0.62	0.58	0.66	51	42994	26	4	22	0	37
ASE_00210	RNaseP_arch links to Rfam database...	0.57	0.55	0.58	36	27199	28	6	20	2	29
ASE_00212	RNaseP_bact_a links to Rfam database...	0.43	0.40	0.46	59	93832	80	3	67	10	89
ASE_00213	RNaseP_arch links to Rfam database...	0.71	0.70	0.73	46	27198	18	4	13	1	20
ASE_00214	RNaseP_bact_a links to Rfam database...	0.66	0.63	0.70	65	56187	35	2	26	7	38
ASE_00215	RNaseP_bact_a links to Rfam database...	0.30	0.28	0.32	28	48429	60	7	52	1	71
ASE_00216	RNaseP_bact_a links to Rfam database...	0.65	0.62	0.67	51	39264	26	7	18	1	31
ASE_00217	RNaseP_bact_a links to Rfam database...	0.21	0.19	0.25	17	40401	54	6	46	2	73
ASE_00221	RNaseP_bact_a links to Rfam database...	0.32	0.29	0.35	34	64522	65	3	61	1	83
ASE_00222	RNaseP_arch links to Rfam database...	0.52	0.50	0.55	78	111958	65	5	60	0	79
ASE_00227	RNaseP_bact_a links to Rfam database...	0.32	0.29	0.36	38	78898	67	3	64	0	95
ASE_00228	RNaseP_bact_a links to Rfam database...	0.38	0.37	0.40	32	46890	50	11	38	1	54
ASE_00229	RNaseP_bact_a links to Rfam database...	0.52	0.53	0.52	46	42398	44	6	36	2	41
ASE_00231	RNaseP_bact_a links to Rfam database...	0.63	0.60	0.67	58	47808	33	4	25	4	38
ASE_00232	RNaseP_bact_a links to Rfam database...	0.70	0.70	0.69	59	38418	29	8	18	3	25
ASE_00234	RNaseP_bact_a links to Rfam database...	0.31	0.28	0.34	36	75360	71	9	61	1	93
ASE_00237	RNaseP_nuc links to Rfam database...	0.11	0.13	0.09	7	45676	81	21	49	11	49
ASE_00238	RNaseP_bact_a links to Rfam database...	0.47	0.44	0.51	50	64163	50	2	46	2	64
ASE_00240	RNaseP_bact_a links to Rfam database...	0.26	0.26	0.27	24	46575	68	3	63	2	69
ASE_00241	RNaseP_bact_a links to Rfam database...	0.20	0.18	0.23	16	43886	55	3	51	1	71
ASE_00242	RNaseP_bact_a links to Rfam database...	0.63	0.59	0.67	66	60976	34	3	30	1	46
ASE_00246	RNaseP_nuc links to Rfam database...	0.29	0.28	0.30	19	48141	65	6	39	20	48
ASE_00247	RNaseP_nuc links to Rfam database...	0.60	0.63	0.57	40	54215	63	11	19	33	24
ASE_00248	RNaseP_bact_a links to Rfam database...	0.19	0.18	0.20	20	62382	81	6	73	2	94
ASE_00250	RNaseP_bact_a links to Rfam database...	0.61	0.57	0.64	75	78886	49	2	40	7	56
ASE_00252	RNaseP_bact_a links to Rfam database...	0.48	0.45	0.51	76	115292	77	4	68	5	92
ASE_00254	RNaseP_bact_a links to Rfam database...	0.38	0.37	0.40	30	36781	48	3	42	3	52
ASE_00255	RNaseP_bact_a links to Rfam database...	0.55	0.53	0.58	69	74572	54	4	46	4	61
ASE_00257	RNaseP_bact_a links to Rfam database...	0.50	0.48	0.53	47	50951	49	3	39	7	50
ASE_00259	RNaseP_bact_a links to Rfam database...	0.44	0.39	0.50	47	73059	50	5	42	3	74
ASE_00263	RNaseP_bact_a links to Rfam database...	0.62	0.59	0.65	71	70390	40	4	35	1	49
ASE_00264	RNaseP_nuc links to Rfam database...	0.43	0.43	0.44	43	49043	59	4	51	4	57
ASE_00267	RNaseP_bact_a links to Rfam database...	0.21	0.19	0.23	17	45075	63	8	50	5	71
ASE_00270	RNaseP_bact_a links to Rfam database...	0.45	0.42	0.49	54	72279	57	5	52	0	74
ASE_00274	RNaseP_bact_a links to Rfam database...	0.49	0.44	0.55	45	55529	38	5	32	1	58
ASE_00277	RNaseP_bact_a links to Rfam database...	0.39	0.37	0.40	34	48121	50	17	33	0	57
ASE_00279	RNaseP_bact_a links to Rfam database...	0.16	0.15	0.17	15	53215	73	2	69	2	86
ASE_00280	RNaseP_bact_a links to Rfam database...	0.40	0.40	0.41	39	51908	60	9	47	4	59
ASE_00281	RNaseP_bact_a links to Rfam database...	0.74	0.66	0.84	58	44482	17	0	11	6	30
ASE_00282	RNaseP_bact_a links to Rfam database...	0.55	0.50	0.60	64	77708	50	7	36	7	63
ASE_00283	RNaseP_bact_a links to Rfam database...	0.54	0.52	0.55	56	61675	47	3	42	2	51
ASE_00284	RNaseP_bact_a links to Rfam database...	0.21	0.20	0.22	22	58211	82	8	70	4	86
ASE_00285	RNaseP_bact_a links to Rfam database...	0.54	0.52	0.57	63	68895	53	2	46	5	59
ASE_00286	RNaseP_bact_a links to Rfam database...	0.38	0.35	0.42	32	46589	45	4	40	1	60
ASE_00287	RNaseP_bact_a links to Rfam database...	0.28	0.27	0.30	28	54852	67	9	57	1	75
ASE_00288	RNaseP_bact_a links to Rfam database...	0.68	0.60	0.78	56	45984	22	0	16	6	37
ASE_00289	RNaseP_bact_a links to Rfam database...	0.71	0.65	0.78	102	100895	33	3	25	5	55
ASE_00291	-	0.46	0.46	0.47	43	48425	50	9	39	2	51
ASE_00292	RNaseP_bact_a links to Rfam database...	0.42	0.38	0.48	52	81701	58	3	54	1	86
ASE_00294	RNaseP_bact_a links to Rfam database...	0.43	0.41	0.45	70	114326	87	5	80	2	101
ASE_00295	RNaseP_bact_a links to Rfam database...	0.46	0.41	0.52	54	73816	53	6	44	3	77
ASE_00296	RNaseP_bact_a links to Rfam database...	0.15	0.14	0.17	21	91680	105	6	99	0	124
ASE_00297	RNaseP_bact_a links to Rfam database...	0.34	0.33	0.36	32	52887	59	8	48	3	66
ASE_00298	RNaseP_bact_a links to Rfam database...	0.21	0.21	0.22	24	67418	87	14	72	1	89
ASE_00299	RNaseP_bact_a links to Rfam database...	0.48	0.45	0.51	45	49366	50	7	37	6	55
ASE_00313	RNaseP_nuc links to Rfam database...	0.60	0.57	0.62	51	62399	57	4	27	26	38
ASE_00316	RNaseP_nuc links to Rfam database...	0.45	0.48	0.42	47	107767	88	16	50	22	51
ASE_00318	RNaseP_bact_b links to Rfam database...	0.64	0.62	0.66	73	80090	41	10	27	4	45
ASE_00327	RNaseP_nuc links to Rfam database...	0.78	0.75	0.82	67	57209	33	3	12	18	22
ASE_00328	RNaseP_bact_b links to Rfam database...	0.61	0.60	0.63	67	72665	47	2	37	8	45
ASE_00330	RNaseP_nuc links to Rfam database...	0.64	0.67	0.63	60	56184	52	10	26	16	30
ASE_00332	RNaseP_bact_a links to Rfam database...	0.41	0.40	0.43	55	81683	75	3	69	3	83
ASE_00335	RNaseP_bact_b links to Rfam database...	0.62	0.58	0.68	67	75367	37	5	27	5	49
ASE_00337	RNaseP_nuc links to Rfam database...	0.54	0.56	0.52	40	39263	49	5	32	12	31
ASE_00338	RNaseP_nuc links to Rfam database...	0.44	0.43	0.45	42	66336	67	6	46	15	56
ASE_00339	RNaseP_bact_a links to Rfam database...	0.50	0.50	0.51	59	80085	64	7	49	8	60
ASE_00340	RNaseP_bact_a links to Rfam database...	0.34	0.35	0.33	30	45965	64	10	51	3	55
ASE_00342	RNaseP_bact_a links to Rfam database...	0.68	0.63	0.73	73	62381	29	2	25	2	42
ASE_00343	RNaseP_bact_a links to Rfam database...	0.69	0.69	0.69	78	83323	53	7	28	18	35
ASE_00346	RNaseP_arch links to Rfam database...	0.38	0.36	0.41	35	48120	53	4	46	3	62
ASE_00353	RNaseP_bact_a links to Rfam database...	0.61	0.60	0.62	64	57867	40	2	37	1	43
ASE_00359	RNaseP_arch links to Rfam database...	0.11	0.10	0.12	8	42711	62	2	57	3	72
ASE_00360	RNaseP_arch links to Rfam database...	0.40	0.37	0.44	24	29348	31	3	28	0	41
ASE_00361	RNaseP_bact_a links to Rfam database...	0.43	0.40	0.47	51	75358	59	8	49	2	76
ASE_00362	RNaseP_bact_a links to Rfam database...	0.53	0.53	0.53	48	48114	45	4	39	2	43
ASE_00363	RNaseP_bact_a links to Rfam database...	0.49	0.48	0.51	45	51272	50	5	38	7	49
ASE_00364	RNaseP_bact_a links to Rfam database...	0.55	0.51	0.59	54	54193	39	3	35	1	51
ASE_00366	RNaseP_bact_a links to Rfam database...	0.40	0.40	0.40	39	58555	60	10	49	1	59
ASE_00367	RNaseP_bact_a links to Rfam database...	0.44	0.43	0.45	37	42988	54	2	44	8	49
ASE_00369	RNaseP_bact_a links to Rfam database...	0.57	0.55	0.60	59	55846	42	6	34	2	48
ASE_00370	RNaseP_bact_a links to Rfam database...	0.43	0.40	0.47	34	41832	40	6	33	1	50
ASE_00372	RNaseP_bact_a links to Rfam database...	0.56	0.55	0.58	55	51908	43	7	33	3	45
ASE_00374	RNaseP_bact_a links to Rfam database...	0.56	0.56	0.56	49	44762	39	6	33	0	39
ASE_00375	RNaseP_bact_a links to Rfam database...	0.56	0.51	0.61	56	60286	41	2	34	5	54
ASE_00376	RNaseP_bact_a links to Rfam database...	0.55	0.51	0.60	54	56863	37	4	32	1	51
ASE_00377	RNaseP_bact_a links to Rfam database...	0.76	0.71	0.81	76	57536	23	2	16	5	31
ASE_00379	RNaseP_bact_a links to Rfam database...	0.46	0.44	0.49	39	45976	42	7	34	1	50
ASE_00380	RNaseP_bact_a links to Rfam database...	0.44	0.41	0.46	41	54857	51	1	47	3	58
ASE_00382	RNaseP_bact_a links to Rfam database...	0.73	0.68	0.78	57	41832	18	5	11	2	27
ASE_00383	RNaseP_bact_a links to Rfam database...	0.39	0.36	0.43	38	54526	51	3	48	0	67
ASE_00384	RNaseP_bact_a links to Rfam database...	0.32	0.30	0.35	28	48435	62	3	50	9	64
ASE_00385	RNaseP_bact_a links to Rfam database...	0.58	0.56	0.61	45	41831	31	10	19	2	36
ASE_00386	RNaseP_bact_a links to Rfam database...	0.58	0.56	0.60	54	50313	38	7	29	2	42
ASE_00387	RNaseP_bact_a links to Rfam database...	0.49	0.48	0.50	50	55845	53	5	45	3	54
ASE_00388	RNaseP_bact_a links to Rfam database...	0.51	0.49	0.54	44	45671	48	1	37	10	45
ASE_00390	RNaseP_bact_a links to Rfam database...	0.53	0.51	0.55	43	42117	46	1	34	11	42
ASE_00393	RNaseP_bact_a links to Rfam database...	0.37	0.34	0.41	32	47816	53	2	45	6	61
ASE_00394	RNaseP_bact_a links to Rfam database...	0.57	0.55	0.59	51	46884	41	2	34	5	42
ASE_00395	RNaseP_bact_a links to Rfam database...	0.71	0.67	0.76	56	41542	28	1	17	10	28
ASE_00396	RNaseP_bact_a links to Rfam database...	0.47	0.46	0.48	38	41536	46	8	34	4	45
ASE_00397	RNaseP_bact_a links to Rfam database...	0.51	0.47	0.55	49	54526	41	4	36	1	56
ASE_00398	RNaseP_bact_a links to Rfam database...	0.39	0.38	0.40	39	55847	61	6	53	2	65
ASE_00400	RNaseP_bact_a links to Rfam database...	0.54	0.53	0.54	56	57867	48	7	40	1	50
ASE_00401	RNaseP_bact_a links to Rfam database...	0.54	0.52	0.56	65	76912	53	7	44	2	61
ASE_00402	RNaseP_bact_a links to Rfam database...	0.59	0.55	0.64	47	42412	29	7	20	2	38
ASE_00403	RNaseP_bact_a links to Rfam database...	0.24	0.22	0.27	24	55855	70	4	62	4	83
ASE_00404	RNaseP_bact_a links to Rfam database...	0.17	0.16	0.18	14	42992	70	4	61	5	71
ASE_00406	RNaseP_bact_a links to Rfam database...	0.56	0.54	0.57	51	48739	49	2	36	11	43
ASE_00408	-	0.42	0.39	0.46	28	32324	39	3	30	6	43
ASE_00409	-	0.30	0.29	0.32	24	40965	57	6	46	5	59
ASE_00411	RNaseP_bact_a links to Rfam database...	0.27	0.27	0.27	24	49367	65	7	57	1	65
ASE_00412	RNaseP_bact_a links to Rfam database...	0.26	0.25	0.27	26	58215	71	9	61	1	79
ASE_00413	RNaseP_bact_a links to Rfam database...	0.48	0.48	0.49	39	44471	45	1	40	4	42
ASE_00414	RNaseP_bact_a links to Rfam database...	0.24	0.23	0.26	22	46276	65	0	62	3	73
ASE_00415	RNaseP_bact_a links to Rfam database...	0.62	0.59	0.65	61	54852	38	5	28	5	42
ASE_00416	RNaseP_bact_a links to Rfam database...	0.52	0.50	0.54	63	77304	57	5	49	3	64
ASE_00417	RNaseP_arch links to Rfam database...	0.36	0.37	0.36	37	54512	68	9	57	2	63
ASE_00418	RNaseP_arch links to Rfam database...	0.12	0.12	0.12	9	38703	71	10	59	2	66
ASE_00419	RNaseP_bact_a links to Rfam database...	0.75	0.71	0.78	73	54853	22	2	18	2	30
ASE_00422	RNaseP_bact_a links to Rfam database...	0.63	0.61	0.65	57	46883	38	3	28	7	37
ASE_00423	RNaseP_bact_a links to Rfam database...	0.36	0.35	0.38	38	56853	62	6	56	0	71
ASE_00426	RNaseP_bact_a links to Rfam database...	0.50	0.51	0.50	55	60965	55	10	45	0	53
ASE_00428	RNaseP_bact_a links to Rfam database...	0.54	0.51	0.57	64	76523	52	6	43	3	61
ASE_00429	-	0.64	0.59	0.68	39	28146	21	3	15	3	27
ASE_00430	RNaseP_bact_a links to Rfam database...	0.64	0.62	0.67	60	46881	36	1	29	6	37
ASE_00431	RNaseP_bact_a links to Rfam database...	0.58	0.52	0.64	49	46284	34	1	26	7	46
ASE_00434	RNaseP_bact_b links to Rfam database...	0.78	0.71	0.85	78	68173	28	1	13	14	32
ASE_00437	RNaseP_bact_a links to Rfam database...	0.45	0.42	0.48	57	79283	62	1	60	1	78
ASE_00438	RNaseP_bact_a links to Rfam database...	0.42	0.39	0.46	45	65968	53	1	52	0	71
ASE_00441	RNaseP_bact_a links to Rfam database...	0.73	0.65	0.81	73	64171	21	6	11	4	39
ASE_00447	RNaseP_bact_a links to Rfam database...	0.70	0.65	0.75	75	60278	31	4	21	6	41
ASE_00448	RNaseP_bact_a links to Rfam database...	0.37	0.34	0.40	38	64167	62	5	51	6	74
ASE_00451	RNaseP_bact_a links to Rfam database...	0.37	0.35	0.40	44	70766	67	2	64	1	81
CRW_00004	-	0.67	0.69	0.65	91	154150	77	9	40	28	40
CRW_00005	-	0.59	0.58	0.59	77	137945	75	6	47	22	55
CRW_00007	-	0.45	0.47	0.43	62	144847	96	21	61	14	71
CRW_00009	-	0.46	0.47	0.46	65	137933	94	12	65	17	73
CRW_00010	-	0.57	0.58	0.57	73	102703	64	14	41	9	53
CRW_00011	-	0.65	0.67	0.64	92	118198	57	9	42	6	46
CRW_00012	-	0.26	0.27	0.25	38	147000	122	27	88	7	103
CRW_00013	Intron_gpI links to Rfam database...	0.10	0.10	0.11	11	103641	107	9	79	19	104
CRW_00014	-	0.48	0.48	0.48	59	103617	70	12	52	6	64
CRW_00016	Intron_gpI links to Rfam database...	0.66	0.61	0.72	73	77320	38	5	23	10	47
CRW_00017	-	0.27	0.29	0.25	26	92131	104	22	56	26	65
CRW_00018	-	0.27	0.31	0.24	37	182556	138	39	78	21	84
CRW_00019	-	0.69	0.67	0.72	92	127637	57	9	27	21	45
CRW_00423	-	0.15	0.14	0.15	27	242379	163	24	126	13	162
CRW_00429	-	0.19	0.18	0.20	42	306725	171	21	148	2	191
CRW_00443	-	0.15	0.13	0.18	34	456305	172	19	132	21	226
CRW_00605	-	0.75	0.74	0.76	52	183853	112	1	15	96	18
CRW_00608	-	0.72	0.67	0.77	53	35709	16	1	15	0	26
CRW_00610	Intron_gpI links to Rfam database...	0.50	0.48	0.51	39	36239	38	6	31	1	42
CRW_00611	-	0.76	0.73	0.80	55	31306	21	4	10	7	20
CRW_00612	-	0.52	0.52	0.53	48	270390	161	1	41	119	45
CRW_00613	Intron_gpI links to Rfam database...	0.81	0.73	0.89	57	34916	15	0	7	8	21
CRW_00614	Intron_gpI links to Rfam database...	0.07	0.09	0.06	5	121689	132	26	51	55	52
CRW_00618	Intron_gpI links to Rfam database...	0.37	0.39	0.34	24	56210	60	15	31	14	37
CRW_00619	Intron_gpI links to Rfam database...	0.00	0.00	0.00	0	164963	138	7	55	76	73
CRW_00620	Intron_gpI links to Rfam database...	0.19	0.21	0.18	13	150901	128	14	47	67	50
CRW_00621	Intron_gpI links to Rfam database...	0.28	0.25	0.30	18	153121	121	12	30	79	53
CRW_00623	Intron_gpI links to Rfam database...	0.12	0.13	0.11	11	129696	122	21	67	34	72
CRW_00626	-	0.61	0.64	0.59	67	100911	62	9	38	15	37
CRW_00629	-	0.47	0.45	0.48	55	91264	60	11	48	1	67
CRW_00632	-	0.81	0.77	0.84	99	82910	24	7	12	5	29
CRW_00633	Intron_gpI links to Rfam database...	0.74	0.72	0.77	76	63447	26	8	15	3	30
CRW_00634	Intron_gpI links to Rfam database...	0.44	0.41	0.47	39	64537	48	18	26	4	55
CRW_00635	-	0.36	0.36	0.36	49	109142	90	15	72	3	88
CRW_00636	-	0.38	0.37	0.40	53	114826	84	18	63	3	90
CRW_00637	-	0.40	0.40	0.40	63	133746	97	9	85	3	95
CRW_00639	-	0.35	0.36	0.34	50	126611	99	24	71	4	88
CRW_00641	-	0.60	0.59	0.60	45	39828	38	6	24	8	31
CRW_00642	-	0.37	0.42	0.34	27	47198	62	15	38	9	38
CRW_00643	-	0.37	0.42	0.34	51	123104	111	29	72	10	71
CRW_00645	-	0.42	0.42	0.43	28	35446	45	10	27	8	39
CRW_00646	-	0.51	0.53	0.49	34	34910	38	7	29	2	30
CRW_00648	-	0.45	0.46	0.44	68	137920	95	11	76	8	80
CRW_00649	-	0.52	0.53	0.51	66	204350	127	9	55	63	58
CRW_00650	-	0.51	0.51	0.51	72	112908	74	10	60	4	70
CRW_00651	-	0.58	0.60	0.55	73	99996	65	11	48	6	48
CRW_00652	-	0.33	0.36	0.30	47	132200	116	24	84	8	83
CRW_00653	-	0.71	0.69	0.73	93	94703	37	2	32	3	41
CRW_00654	-	0.76	0.71	0.81	88	78101	25	4	17	4	36
CRW_00655	-	0.65	0.62	0.69	77	89141	36	7	28	1	47
CRW_00656	-	0.40	0.38	0.42	49	90407	75	10	59	6	80
CRW_00657	-	0.69	0.70	0.68	95	105890	50	7	38	5	41
CRW_00658	-	0.41	0.40	0.41	41	74592	58	12	46	0	61
CRW_00659	-	0.45	0.48	0.43	29	32317	48	8	31	9	32
CRW_00660	-	0.53	0.53	0.52	32	22094	30	5	24	1	28
CRW_00661	-	0.09	0.10	0.08	5	24247	61	20	38	3	46
CRW_00662	-	0.13	0.14	0.12	9	28606	71	8	57	6	56
CRW_00663	-	0.19	0.20	0.18	12	26041	59	7	46	6	49
CRW_00664	-	0.37	0.38	0.36	30	53544	61	12	42	7	48
CRW_00665	-	0.00	0.00	0.00	0	23592	62	16	45	1	48
CRW_00666	-	0.38	0.37	0.39	47	96019	85	8	67	10	79
CRW_00668	-	0.51	0.51	0.51	77	163728	83	13	60	10	73
CRW_00669	-	0.48	0.48	0.49	57	97344	61	18	42	1	62
CRW_00670	Intron_gpI links to Rfam database...	0.54	0.53	0.55	63	70011	53	6	45	2	57
CRW_00671	Intron_gpI links to Rfam database...	0.66	0.59	0.74	69	62742	28	5	19	4	48
CRW_00672	Intron_gpI links to Rfam database...	0.52	0.50	0.56	55	72291	48	9	35	4	56
CRW_00673	-	0.63	0.67	0.59	70	100010	50	28	20	2	35
CRW_00674	Intron_gpI links to Rfam database...	0.43	0.42	0.44	52	83319	69	14	51	4	72
CRW_00676	Intron_gpI links to Rfam database...	0.30	0.30	0.31	35	93414	85	9	70	6	80
CRW_00677	-	0.57	0.60	0.55	63	71895	55	14	38	3	42
CRW_00679	-	0.38	0.39	0.38	42	76525	71	18	51	2	65
CRW_00681	-	0.28	0.29	0.26	33	112925	97	30	62	5	79
CRW_00685	-	0.40	0.43	0.38	46	156958	99	26	50	23	60
CRW_00686	-	0.36	0.33	0.39	41	95162	76	4	59	13	84
CRW_00687	-	0.54	0.56	0.51	37	28608	37	8	27	2	29
CRW_00688	-	0.61	0.60	0.63	34	21891	22	0	20	2	23
CRW_00689	-	0.43	0.43	0.44	33	33595	47	7	35	5	44
CRW_00690	-	0.66	0.67	0.65	46	33340	29	9	16	4	23
CRW_00691	-	0.71	0.72	0.70	48	27192	25	4	17	4	19
CRW_00692	Intron_gpI links to Rfam database...	0.26	0.27	0.25	24	68538	77	23	50	4	66
CRW_00693	-	0.69	0.70	0.67	86	89124	51	9	34	8	36
CRW_00694	-	0.60	0.61	0.60	74	85782	52	9	40	3	48
CRW_00699	-	0.27	0.25	0.28	32	91692	82	12	70	0	94
CRW_00700	-	0.68	0.69	0.68	102	180750	71	14	35	22	45
CRW_00702	-	0.68	0.75	0.62	56	357344	176	25	10	141	19
CRW_00703	-	0.25	0.27	0.23	18	40390	66	14	48	4	48
CRW_00704	-	0.67	0.66	0.68	62	386669	180	11	18	151	32
CRW_00714	-	0.32	0.36	0.29	39	186220	127	28	68	31	68
CRW_00715	-	0.53	0.53	0.54	55	69276	49	6	41	2	49
CRW_00716	-	0.59	0.58	0.60	52	193667	101	9	25	67	37
CRW_00717	-	0.42	0.39	0.45	58	153607	87	13	57	17	90
CRW_00718	-	0.31	0.28	0.34	54	189878	115	11	93	11	137
CRW_00719	-	0.54	0.54	0.53	49	230089	113	11	32	70	42
CRW_00720	-	0.29	0.34	0.25	31	208211	121	25	68	28	60
CRW_00721	-	0.37	0.38	0.36	26	58581	61	14	32	15	42
CRW_00764	-	0.05	0.05	0.05	9	252931	177	35	141	1	187
CRW_00775	-	0.07	0.07	0.07	14	314619	197	49	139	9	198
CRW_00780	-	0.23	0.21	0.25	54	475586	170	24	136	10	201
CRW_00794	-	0.30	0.27	0.32	67	434571	161	24	116	21	179
CRW_00796	-	0.09	0.09	0.11	20	384814	170	27	142	1	215
CRW_00815	-	0.31	0.33	0.30	52	159719	126	25	99	2	106
CRW_00816	-	0.37	0.38	0.36	49	143778	102	15	74	13	80
CRW_00820	-	0.47	0.46	0.49	66	136368	83	10	59	14	79
PDB_00005	Tymo_tRNA-like links to Rfam database...	0.88	0.79	1.00	11	935	0	0	0	0	3
PDB_00018	-	0.19	0.20	0.21	4	1016	15	2	13	0	16
PDB_00020	-	0.75	0.65	0.87	13	765	2	0	2	0	7
PDB_00041	-	1.00	1.00	1.00	12	618	0	0	0	0	0
PDB_00053	-	1.00	1.00	1.00	11	424	0	0	0	0	0
PDB_00056	-	0.93	0.88	1.00	14	616	0	0	0	0	2
PDB_00072	-	0.30	0.31	0.30	65	148025	150	10	140	0	145
PDB_00078	-	0.68	0.63	0.73	73	49670	27	9	18	0	42
PDB_00079	-	0.48	0.44	0.53	62	121653	64	17	39	8	80
PDB_00123	-	0.33	0.33	0.33	12	4150	24	0	24	0	24
PDB_00124	-	0.86	0.90	0.82	9	485	2	2	0	0	1
PDB_00128	-	0.80	0.71	0.91	10	485	1	0	1	0	4
PDB_00134	-	0.79	0.63	1.00	5	373	0	0	0	0	3
PDB_00138	-	0.94	1.00	0.89	8	369	1	1	0	0	0
PDB_00209	-	0.96	1.00	0.92	11	549	1	1	0	0	0
PDB_00243	-	1.00	1.00	1.00	12	618	0	0	0	0	0
PDB_00278	-	0.61	0.57	0.65	41	24913	22	4	18	0	31
PDB_00352	-	0.86	0.79	0.94	15	1209	1	0	1	0	4
PDB_00370	-	0.00	0.00	0.00	0	15181	44	13	31	0	25
PDB_00403	-	0.53	0.52	0.54	79	124604	74	11	56	7	74
PDB_00423	-	0.55	0.50	0.61	37	26735	24	4	20	0	37
PDB_00447	-	0.11	0.11	0.12	5	7097	38	7	31	0	39
PDB_00571	tRNA links to Rfam database...	0.87	0.80	0.95	20	3300	1	1	0	0	5
PDB_00701	-	0.11	0.11	0.12	12	45351	88	9	79	0	97
PDB_00713	-	0.43	0.43	0.45	9	1996	11	0	11	0	12
PDB_00716	HDV_ribozyme links to Rfam database...	0.68	0.70	0.67	16	2677	9	0	8	1	7
PDB_00747	-	0.57	0.48	0.68	38	24475	19	1	17	1	42
PDB_00804	-	0.00	0.00	0.00	0	15344	56	10	46	0	50
PDB_00827	Intron_gpI links to Rfam database...	0.68	0.59	0.79	48	26967	15	0	13	2	33
PDB_00828	Purine links to Rfam database...	0.88	0.78	1.00	21	2464	0	0	0	0	6
PDB_00829	Purine links to Rfam database...	0.86	0.75	1.00	18	2260	0	0	0	0	6
PDB_00842	-	0.79	0.63	1.00	5	373	0	0	0	0	3
PDB_00851	-	0.49	0.44	0.56	18	4721	14	0	14	0	23
PDB_00857	-	1.00	1.00	1.00	15	1066	0	0	0	0	0
PDB_00874	-	-0.02	0.00	0.00	0	928	18	0	18	0	20
PDB_00886	-	-0.01	0.00	0.00	0	4147	39	0	39	0	40
PDB_00917	-	0.60	0.57	0.64	54	35161	34	4	26	4	41
PDB_00918	-	0.93	1.00	0.88	7	317	1	1	0	0	0
PDB_00919	RNaseP_bact_a links to Rfam database...	0.53	0.49	0.59	50	44168	38	3	32	3	53
PDB_01009	tRNA links to Rfam database...	0.90	0.90	0.90	19	2464	5	0	2	3	2
PDB_01020	Purine links to Rfam database...	0.86	0.74	1.00	17	2261	1	0	0	1	6
PDB_01040	-	0.30	0.30	0.32	6	1109	13	0	13	0	14
PDB_01059	-	0.88	1.00	0.78	7	222	2	2	0	0	0
PDB_01070	-	0.78	0.70	0.86	38	12676	6	0	6	0	16
PDB_01073	SAM links to Rfam database...	0.52	0.47	0.57	16	4343	13	2	10	1	18
PDB_01092	glmS links to Rfam database...	0.81	0.75	0.89	39	10109	6	1	4	1	13
PDB_01129	-	0.40	0.39	0.41	28	35443	44	12	28	4	43
PDB_01157	-	0.08	0.08	0.09	8	49999	81	10	69	2	90
PDB_01166	-	0.61	0.58	0.64	123	181914	73	14	55	4	89
PDB_01194	-	0.89	0.87	0.93	13	482	1	1	0	0	2
PDB_01201	-	0.88	0.77	1.00	17	1111	0	0	0	0	5
PDB_01203	-	0.74	0.68	0.81	13	1160	3	2	1	0	6
PDB_01250	-	0.17	0.15	0.19	6	12059	25	5	20	0	35
PDB_01260	-	0.92	0.92	0.92	23	1805	2	1	1	0	2
PDB_01281	-	-0.04	0.00	0.00	0	365	13	0	13	0	14
PDB_01299	-	0.71	0.67	0.77	10	890	3	1	2	0	5
PDB_01309	-	0.12	0.15	0.10	6	9122	56	12	40	4	33
RFA_00597	Telomerase-vert links to Rfam database...	0.34	0.37	0.31	40	97776	101	20	67	14	69
RFA_00598	Telomerase-vert links to Rfam database...	0.35	0.36	0.35	36	84563	76	12	55	9	65
RFA_00599	Telomerase-vert links to Rfam database...	0.39	0.40	0.38	44	101359	92	13	59	20	67
RFA_00600	Telomerase-vert links to Rfam database...	0.18	0.21	0.16	21	120164	129	29	81	19	79
RFA_00601	Telomerase-vert links to Rfam database...	0.09	0.10	0.08	11	99104	129	18	102	9	103
RFA_00602	Telomerase-vert links to Rfam database...	0.41	0.44	0.39	51	101343	91	19	62	10	65
RFA_00632	HDV_ribozyme links to Rfam database...	0.88	0.89	0.86	25	4066	4	3	1	0	3
RFA_00636	HDV_ribozyme links to Rfam database...	0.73	0.71	0.74	20	3978	7	5	2	0	8
RFA_00767	Corona_pk3 links to Rfam database...	1.00	1.00	1.00	18	1873	0	0	0	0	0
RFA_00768	Corona_pk3 links to Rfam database...	1.00	1.00	1.00	18	1873	0	0	0	0	0
RFA_00769	Corona_pk3 links to Rfam database...	0.85	0.94	0.77	17	1931	5	4	1	0	1
RFA_00770	Corona_pk3 links to Rfam database...	0.88	0.78	1.00	14	2002	4	0	0	4	4
RFA_00773	Corona_pk3 links to Rfam database...	0.97	1.00	0.95	18	1934	5	1	0	4	0
RFA_00779	Corona_pk3 links to Rfam database...	0.97	0.94	1.00	17	1936	0	0	0	0	1
RFA_00808	RydC links to Rfam database...	1.00	1.00	1.00	16	2000	0	0	0	0	0
RFA_00809	RydC links to Rfam database...	0.79	0.81	0.76	13	2128	4	0	4	0	3
TMR_00007	tmRNA links to Rfam database...	0.34	0.32	0.36	35	61679	67	14	48	5	73
TMR_00008	tmRNA links to Rfam database...	0.36	0.36	0.37	38	65964	71	12	52	7	68
TMR_00010	tmRNA links to Rfam database...	0.35	0.35	0.35	34	57873	63	7	56	0	62
TMR_00012	tmRNA links to Rfam database...	0.31	0.31	0.32	25	64541	72	12	42	18	56
TMR_00014	tmRNA links to Rfam database...	0.66	0.64	0.69	70	68534	41	12	19	10	40
TMR_00017	tmRNA links to Rfam database...	0.25	0.24	0.26	24	67070	73	5	62	6	78
TMR_00018	tmRNA links to Rfam database...	0.56	0.59	0.54	54	64520	48	15	31	2	38
TMR_00028	tmRNA links to Rfam database...	0.52	0.51	0.53	49	62743	45	5	38	2	48
TMR_00030	tmRNA links to Rfam database...	0.23	0.23	0.23	25	75746	88	12	72	4	86
TMR_00034	tmRNA links to Rfam database...	0.60	0.60	0.61	66	59923	47	6	36	5	44
TMR_00035	tmRNA links to Rfam database...	0.57	0.60	0.55	59	67788	59	11	38	10	39
TMR_00036	tmRNA links to Rfam database...	0.49	0.51	0.47	52	90415	64	13	45	6	49
TMR_00038	tmRNA links to Rfam database...	0.28	0.28	0.29	31	71145	81	15	62	4	79
TMR_00042	tmRNA links to Rfam database...	0.16	0.15	0.16	15	62744	81	8	68	5	83
TMR_00046	tmRNA links to Rfam database...	0.28	0.29	0.26	28	62729	78	15	63	0	68
TMR_00047	tmRNA links to Rfam database...	0.29	0.33	0.25	19	48439	70	23	35	12	38
TMR_00048	tmRNA links to Rfam database...	0.31	0.33	0.30	31	64876	75	16	57	2	64
TMR_00049	tmRNA links to Rfam database...	0.52	0.52	0.52	45	63103	52	7	35	10	42
TMR_00051	tmRNA links to Rfam database...	0.56	0.54	0.59	51	65616	49	3	33	13	43
TMR_00055	tmRNA links to Rfam database...	0.27	0.26	0.29	30	78898	78	13	62	3	84
TMR_00057	tmRNA links to Rfam database...	0.34	0.38	0.30	30	73820	83	23	47	13	49
TMR_00061	tmRNA links to Rfam database...	0.19	0.19	0.20	19	59589	84	9	68	7	80
TMR_00062	tmRNA links to Rfam database...	0.72	0.69	0.74	72	78509	40	8	17	15	32
TMR_00064	tmRNA links to Rfam database...	0.45	0.45	0.46	46	76927	55	18	37	0	57
TMR_00065	tmRNA links to Rfam database...	0.50	0.48	0.53	51	76540	46	14	31	1	55
TMR_00067	tmRNA links to Rfam database...	0.38	0.39	0.38	44	82100	73	11	60	2	70
TMR_00073	tmRNA links to Rfam database...	0.40	0.38	0.42	45	65597	62	6	55	1	72
TMR_00076	tmRNA links to Rfam database...	0.37	0.38	0.37	38	70773	75	8	57	10	62
TMR_00080	tmRNA links to Rfam database...	0.45	0.46	0.44	44	70400	57	19	37	1	52
TMR_00081	tmRNA links to Rfam database...	0.55	0.50	0.62	53	67075	33	9	24	0	53
TMR_00082	tmRNA links to Rfam database...	0.50	0.49	0.52	47	67805	48	11	33	4	49
TMR_00083	tmRNA links to Rfam database...	0.37	0.37	0.37	39	68159	71	11	56	4	66
TMR_00092	tmRNA links to Rfam database...	0.46	0.50	0.42	50	67409	72	15	54	3	51
TMR_00093	tmRNA links to Rfam database...	0.23	0.24	0.23	24	64157	80	14	66	0	78
TMR_00096	tmRNA links to Rfam database...	0.26	0.26	0.27	26	64883	71	11	60	0	74
TMR_00101	tmRNA links to Rfam database...	0.48	0.47	0.50	50	64161	55	8	42	5	57
TMR_00102	tmRNA links to Rfam database...	0.46	0.47	0.45	47	64156	61	17	41	3	54
TMR_00103	tmRNA links to Rfam database...	0.67	0.67	0.67	72	64153	37	7	29	1	36
TMR_00104	-	0.17	0.19	0.15	13	66709	77	22	51	4	57
TMR_00106	tmRNA links to Rfam database...	0.41	0.40	0.42	48	89985	67	21	46	0	72
TMR_00109	tmRNA links to Rfam database...	0.40	0.37	0.45	45	88309	63	9	47	7	77
TMR_00111	tmRNA links to Rfam database...	0.49	0.47	0.52	57	90415	61	7	46	8	65
TMR_00116	tmRNA links to Rfam database...	0.62	0.60	0.65	62	64885	45	3	30	12	42
TMR_00117	tmRNA links to Rfam database...	0.64	0.62	0.66	73	80090	46	4	33	9	45
TMR_00118	tmRNA links to Rfam database...	0.34	0.33	0.35	39	81295	73	5	67	1	81
TMR_00119	tmRNA links to Rfam database...	0.31	0.31	0.32	32	71910	73	9	59	5	72
TMR_00123	tmRNA links to Rfam database...	0.26	0.25	0.27	25	66338	71	4	63	4	76
TMR_00124	tmRNA links to Rfam database...	0.49	0.49	0.49	48	70403	61	12	37	12	50
TMR_00125	tmRNA links to Rfam database...	0.63	0.62	0.65	61	64167	37	6	27	4	38
TMR_00127	tmRNA links to Rfam database...	0.65	0.64	0.67	62	62742	31	13	18	0	35
TMR_00128	tmRNA links to Rfam database...	0.44	0.44	0.44	42	60979	56	11	43	2	54
TMR_00131	tmRNA links to Rfam database...	0.46	0.44	0.47	44	64886	57	11	39	7	55
TMR_00135	tmRNA links to Rfam database...	0.75	0.70	0.80	69	62749	23	6	11	6	30
TMR_00136	tmRNA links to Rfam database...	0.28	0.30	0.27	30	74579	88	13	69	6	71
TMR_00137	tmRNA links to Rfam database...	0.39	0.36	0.43	32	61000	48	8	35	5	57
TMR_00139	tmRNA links to Rfam database...	0.65	0.68	0.62	62	62028	47	20	18	9	29
TMR_00140	tmRNA links to Rfam database...	0.62	0.59	0.66	59	73831	37	7	23	7	41
TMR_00142	tmRNA links to Rfam database...	0.54	0.53	0.55	54	70778	56	10	34	12	48
TMR_00143	tmRNA links to Rfam database...	0.49	0.48	0.52	49	64525	56	9	37	10	54
TMR_00144	tmRNA links to Rfam database...	0.37	0.36	0.39	37	74209	64	11	48	5	66
TMR_00146	tmRNA links to Rfam database...	0.84	0.71	1.00	30	32101	23	0	0	23	12
TMR_00150	tmRNA links to Rfam database...	0.46	0.50	0.43	21	43022	50	10	18	22	21
TMR_00152	tmRNA links to Rfam database...	0.31	0.30	0.32	35	81296	83	8	67	8	80
TMR_00155	tmRNA links to Rfam database...	0.56	0.53	0.59	55	61683	45	4	34	7	49
TMR_00156	tmRNA links to Rfam database...	0.24	0.24	0.24	23	60282	77	19	54	4	74
TMR_00158	tmRNA links to Rfam database...	0.51	0.49	0.52	49	60632	49	4	41	4	50
TMR_00159	tmRNA links to Rfam database...	0.19	0.21	0.19	19	62026	83	19	64	0	73
TMR_00160	tmRNA links to Rfam database...	0.37	0.37	0.37	35	64525	70	15	45	10	60
TMR_00164	tmRNA links to Rfam database...	0.54	0.52	0.56	55	66697	51	4	39	8	51
TMR_00165	tmRNA links to Rfam database...	0.49	0.48	0.51	47	61683	55	11	35	9	50
TMR_00166	tmRNA links to Rfam database...	0.27	0.27	0.28	27	61679	78	7	63	8	74
TMR_00168	tmRNA links to Rfam database...	0.79	0.79	0.80	90	60962	24	6	17	1	24
TMR_00173	tmRNA links to Rfam database...	0.34	0.40	0.29	17	42137	64	19	22	23	25
TMR_00179	tmRNA links to Rfam database...	0.42	0.42	0.41	41	67062	65	10	48	7	57
TMR_00180	tmRNA links to Rfam database...	0.38	0.37	0.39	37	67067	63	19	38	6	62
TMR_00182	tmRNA links to Rfam database...	0.10	0.10	0.11	10	66339	87	10	71	6	92
TMR_00183	tmRNA links to Rfam database...	0.22	0.22	0.22	23	63087	85	12	68	5	80
TMR_00184	tmRNA links to Rfam database...	0.40	0.41	0.40	42	63084	68	6	58	4	60
TMR_00193	tmRNA links to Rfam database...	0.19	0.20	0.18	16	59251	80	20	53	7	64
TMR_00194	tmRNA links to Rfam database...	0.41	0.40	0.42	37	62746	55	11	41	3	56
TMR_00196	tmRNA links to Rfam database...	0.42	0.38	0.46	37	60995	51	6	37	8	60
TMR_00199	tmRNA links to Rfam database...	0.27	0.25	0.28	23	62754	62	18	40	4	69
TMR_00200	-	0.40	0.40	0.41	30	41542	54	8	36	10	45
TMR_00204	tmRNA links to Rfam database...	0.51	0.47	0.55	46	60294	47	7	31	9	51
TMR_00207	tmRNA links to Rfam database...	0.25	0.24	0.25	25	72291	81	7	67	7	78
TMR_00223	tmRNA links to Rfam database...	0.45	0.43	0.48	41	64175	49	12	33	4	54
TMR_00224	tmRNA links to Rfam database...	0.40	0.39	0.41	39	64884	62	10	47	5	62
TMR_00226	tmRNA links to Rfam database...	0.48	0.48	0.49	50	69648	61	10	43	8	55
TMR_00227	tmRNA links to Rfam database...	0.44	0.46	0.43	46	70018	65	12	49	4	55
TMR_00228	tmRNA links to Rfam database...	0.31	0.32	0.30	35	88294	89	22	59	8	73
TMR_00234	tmRNA links to Rfam database...	0.36	0.32	0.41	33	58915	53	9	39	5	69
TMR_00238	tmRNA links to Rfam database...	0.33	0.36	0.31	36	84549	87	16	65	6	65
TMR_00239	tmRNA links to Rfam database...	0.60	0.63	0.58	60	61672	47	11	33	3	36
TMR_00240	tmRNA links to Rfam database...	0.53	0.54	0.52	46	63101	49	13	30	6	39
TMR_00246	-	0.52	0.50	0.55	17	78179	97	3	11	83	17
TMR_00248	tmRNA links to Rfam database...	0.16	0.18	0.13	7	54232	77	20	26	31	31
TMR_00257	tmRNA links to Rfam database...	0.24	0.22	0.25	22	67073	67	13	53	1	76
TMR_00259	tmRNA links to Rfam database...	0.60	0.57	0.63	59	67802	38	11	24	3	44
TMR_00261	tmRNA links to Rfam database...	0.41	0.41	0.42	41	66698	56	12	44	0	60
TMR_00262	tmRNA links to Rfam database...	0.44	0.46	0.42	48	74191	66	19	47	0	56
TMR_00271	tmRNA links to Rfam database...	0.44	0.45	0.44	41	64168	61	6	46	9	50
TMR_00274	tmRNA links to Rfam database...	0.26	0.27	0.25	28	66683	91	13	71	7	77
TMR_00278	tmRNA links to Rfam database...	0.44	0.45	0.42	46	67787	72	5	58	9	56
TMR_00279	tmRNA links to Rfam database...	0.46	0.48	0.45	45	68905	63	10	46	7	49
TMR_00280	tmRNA links to Rfam database...	0.48	0.49	0.48	49	65963	67	6	48	13	52
TMR_00283	tmRNA links to Rfam database...	0.51	0.53	0.49	51	65237	56	14	39	3	45
TMR_00289	tmRNA links to Rfam database...	0.41	0.41	0.42	40	67065	67	11	45	11	58
TMR_00290	tmRNA links to Rfam database...	0.38	0.36	0.41	33	64181	48	11	36	1	59
TMR_00296	tmRNA links to Rfam database...	0.22	0.23	0.21	23	68898	88	19	66	3	75
TMR_00298	tmRNA links to Rfam database...	0.40	0.42	0.39	42	68157	72	11	55	6	59
TMR_00300	tmRNA links to Rfam database...	0.64	0.60	0.68	67	70401	42	3	29	10	45
TMR_00301	tmRNA links to Rfam database...	0.28	0.26	0.29	25	82130	66	12	48	6	71
TMR_00302	tmRNA links to Rfam database...	0.52	0.55	0.48	52	77313	71	20	36	15	42
TMR_00305	tmRNA links to Rfam database...	0.49	0.47	0.52	48	60983	50	9	35	6	54
TMR_00306	tmRNA links to Rfam database...	0.29	0.29	0.29	31	64155	81	7	68	6	75
TMR_00310	tmRNA links to Rfam database...	0.61	0.59	0.63	58	63811	42	6	28	8	40
TMR_00317	tmRNA links to Rfam database...	0.60	0.61	0.59	62	68160	47	13	30	4	40
TMR_00331	tmRNA links to Rfam database...	0.30	0.33	0.28	27	66697	85	11	60	14	55
TMR_00332	tmRNA links to Rfam database...	0.51	0.48	0.55	48	67073	45	7	33	5	51
TMR_00334	tmRNA links to Rfam database...	0.56	0.54	0.58	55	66700	48	8	32	8	46
TMR_00337	tmRNA links to Rfam database...	0.60	0.58	0.62	69	82917	43	12	30	1	50
TMR_00340	tmRNA links to Rfam database...	0.47	0.46	0.49	37	64185	59	3	36	20	44
TMR_00341	tmRNA links to Rfam database...	0.29	0.30	0.28	28	63091	73	17	54	2	64
TMR_00343	tmRNA links to Rfam database...	0.39	0.39	0.39	41	64876	67	10	53	4	64
TMR_00345	tmRNA links to Rfam database...	0.54	0.54	0.53	56	63798	49	12	37	0	48
TMR_00346	tmRNA links to Rfam database...	0.57	0.54	0.60	51	64176	38	9	25	4	43
TMR_00348	tmRNA links to Rfam database...	0.54	0.49	0.60	49	77339	50	7	26	17	50
TMR_00352	tmRNA links to Rfam database...	0.14	0.16	0.12	12	95168	106	29	57	20	63
TMR_00353	tmRNA links to Rfam database...	0.53	0.54	0.51	57	84143	64	23	32	9	48
TMR_00357	tmRNA links to Rfam database...	0.57	0.62	0.53	57	82921	57	23	27	7	35
TMR_00358	tmRNA links to Rfam database...	0.46	0.47	0.44	47	74972	65	20	39	6	52
TMR_00361	-	0.34	0.38	0.32	27	93443	62	20	38	4	45
TMR_00366	tmRNA links to Rfam database...	0.50	0.51	0.50	51	67794	55	15	36	4	49
TMR_00372	tmRNA links to Rfam database...	0.49	0.48	0.50	46	70408	56	10	36	10	50
TMR_00374	tmRNA links to Rfam database...	0.21	0.23	0.20	21	81706	88	18	65	5	71
TMR_00375	tmRNA links to Rfam database...	0.48	0.51	0.45	50	73425	71	17	44	10	48
TMR_00376	tmRNA links to Rfam database...	0.34	0.37	0.32	35	74582	81	20	54	7	60
TMR_00378	tmRNA links to Rfam database...	0.43	0.44	0.42	43	67793	60	13	47	0	54
TMR_00383	tmRNA links to Rfam database...	0.29	0.31	0.28	31	66683	83	12	69	2	69
TMR_00384	tmRNA links to Rfam database...	0.20	0.19	0.20	21	65599	91	7	76	8	87
TMR_00393	tmRNA links to Rfam database...	0.52	0.58	0.46	31	53234	61	17	19	25	22
TMR_00395	tmRNA links to Rfam database...	0.44	0.42	0.47	46	64522	56	8	44	4	63
TMR_00398	tmRNA links to Rfam database...	0.40	0.39	0.42	41	65244	60	6	50	4	65
TMR_00399	tmRNA links to Rfam database...	0.26	0.27	0.25	25	64879	79	17	59	3	69
TMR_00404	tmRNA links to Rfam database...	0.42	0.46	0.39	42	67419	67	21	46	0	50
TMR_00408	tmRNA links to Rfam database...	0.38	0.40	0.36	35	65969	72	16	46	10	53
TMR_00409	tmRNA links to Rfam database...	0.57	0.59	0.55	27	68586	66	5	17	44	19
TMR_00411	tmRNA links to Rfam database...	0.40	0.39	0.41	34	60993	54	13	35	6	53
TMR_00415	tmRNA links to Rfam database...	0.31	0.32	0.31	32	67057	75	13	59	3	69
TMR_00419	tmRNA links to Rfam database...	0.63	0.63	0.63	70	81698	60	19	23	18	41
TMR_00422	tmRNA links to Rfam database...	0.59	0.58	0.60	53	67808	48	6	29	13	39
TMR_00423	tmRNA links to Rfam database...	0.12	0.14	0.11	10	63816	87	19	58	10	63
TMR_00427	tmRNA links to Rfam database...	0.33	0.31	0.36	30	67445	60	9	44	7	67
TMR_00429	tmRNA links to Rfam database...	0.58	0.60	0.57	65	74577	51	13	36	2	44
TMR_00430	tmRNA links to Rfam database...	0.45	0.44	0.47	48	82519	56	17	37	2	61
TMR_00431	tmRNA links to Rfam database...	0.63	0.62	0.64	34	51950	52	7	12	33	21
TMR_00432	tmRNA links to Rfam database...	0.31	0.33	0.30	34	79687	80	9	70	1	70
TMR_00433	tmRNA links to Rfam database...	0.17	0.17	0.17	18	80092	90	13	77	0	88
TMR_00439	tmRNA links to Rfam database...	0.41	0.45	0.38	45	68518	82	19	53	10	56
TMR_00441	tmRNA links to Rfam database...	0.14	0.16	0.12	13	62019	102	19	77	6	70
TMR_00443	tmRNA links to Rfam database...	0.52	0.48	0.56	50	67071	42	9	31	2	54
TMR_00448	tmRNA links to Rfam database...	0.59	0.57	0.61	52	62043	40	3	30	7	40
TMR_00451	tmRNA links to Rfam database...	0.21	0.22	0.20	20	63448	82	16	62	4	69
TMR_00457	tmRNA links to Rfam database...	0.43	0.44	0.42	45	78500	63	11	50	2	57
TMR_00458	tmRNA links to Rfam database...	0.37	0.34	0.40	32	63465	53	15	34	4	61
TMR_00460	tmRNA links to Rfam database...	0.43	0.42	0.44	44	79302	62	8	47	7	62
TMR_00465	tmRNA links to Rfam database...	0.32	0.32	0.32	30	64166	69	19	46	4	64
TMR_00469	tmRNA links to Rfam database...	0.35	0.34	0.35	34	64524	67	5	57	5	66
TMR_00472	tmRNA links to Rfam database...	0.23	0.24	0.23	23	64519	86	16	62	8	74
TMR_00478	tmRNA links to Rfam database...	0.19	0.19	0.18	19	71905	91	15	71	5	80
TMR_00498	tmRNA links to Rfam database...	0.44	0.44	0.44	44	68905	68	14	43	11	55
TMR_00499	tmRNA links to Rfam database...	0.35	0.37	0.33	37	64509	79	6	68	5	62
TMR_00501	tmRNA links to Rfam database...	0.44	0.46	0.42	42	62381	60	14	44	2	50
TMR_00502	tmRNA links to Rfam database...	0.36	0.37	0.36	34	75372	75	8	52	15	59
TMR_00503	tmRNA links to Rfam database...	0.17	0.16	0.18	18	67795	83	5	78	0	93
TMR_00519	tmRNA links to Rfam database...	0.25	0.25	0.24	24	63091	77	12	63	2	71
TMR_00520	tmRNA links to Rfam database...	0.35	0.33	0.37	33	63100	66	11	46	9	66
TMR_00522	tmRNA links to Rfam database...	0.37	0.36	0.39	35	63100	62	5	50	7	62
TMR_00528	tmRNA links to Rfam database...	0.46	0.44	0.48	43	63100	58	12	35	11	54
TMR_00540	tmRNA links to Rfam database...	0.10	0.11	0.11	11	73432	101	12	81	8	93
TMR_00541	tmRNA links to Rfam database...	0.31	0.30	0.32	32	61675	76	8	61	7	73
TMR_00544	tmRNA links to Rfam database...	0.36	0.34	0.37	37	89577	73	10	52	11	71
TMR_00547	tmRNA links to Rfam database...	0.45	0.44	0.46	44	65246	51	7	44	0	56
TMR_00553	tmRNA links to Rfam database...	0.49	0.49	0.49	40	48123	47	15	27	5	41
TMR_00559	tmRNA links to Rfam database...	0.35	0.33	0.37	33	62391	63	7	50	6	68
TMR_00560	tmRNA links to Rfam database...	0.33	0.31	0.37	30	60993	57	5	47	5	68
TMR_00562	tmRNA links to Rfam database...	0.25	0.26	0.24	27	72660	86	14	70	2	75
TMR_00563	tmRNA links to Rfam database...	0.59	0.59	0.59	61	75363	48	13	29	6	42
TMR_00566	tmRNA links to Rfam database...	0.38	0.37	0.39	37	60631	58	9	49	0	63
TMR_00568	tmRNA links to Rfam database...	0.35	0.33	0.37	33	60637	62	7	49	6	66
TMR_00570	tmRNA links to Rfam database...	0.62	0.58	0.67	56	60295	35	3	24	8	41
TMR_00571	tmRNA links to Rfam database...	0.43	0.41	0.45	41	60635	57	9	41	7	58
TMR_00576	tmRNA links to Rfam database...	0.59	0.58	0.60	59	60280	46	12	27	7	43
TMR_00579	tmRNA links to Rfam database...	0.17	0.19	0.16	17	80496	100	21	67	12	73
TMR_00580	tmRNA links to Rfam database...	0.46	0.43	0.49	43	60638	48	5	40	3	57
TMR_00581	tmRNA links to Rfam database...	0.51	0.50	0.53	49	62388	49	11	33	5	49
TMR_00584	tmRNA links to Rfam database...	0.58	0.55	0.61	53	60988	42	5	29	8	44
TMR_00586	tmRNA links to Rfam database...	0.42	0.39	0.44	38	60989	53	9	39	5	59
TMR_00587	tmRNA links to Rfam database...	0.83	0.83	0.83	83	61325	23	4	13	6	17
TMR_00588	tmRNA links to Rfam database...	0.42	0.43	0.41	43	77316	70	13	49	8	58
TMR_00594	tmRNA links to Rfam database...	0.31	0.31	0.31	32	79297	74	12	60	2	72
TMR_00596	tmRNA links to Rfam database...	0.35	0.34	0.36	32	78120	71	13	45	13	63
TMR_00599	tmRNA links to Rfam database...	0.30	0.35	0.25	25	63091	75	29	45	1	47
TMR_00600	tmRNA links to Rfam database...	0.15	0.15	0.15	17	79688	95	10	85	0	98
TMR_00601	tmRNA links to Rfam database...	0.79	0.71	0.88	30	58962	47	1	3	43	12
TMR_00603	tmRNA links to Rfam database...	0.63	0.72	0.54	31	60321	70	10	16	44	12
TMR_00604	tmRNA links to Rfam database...	0.69	0.70	0.68	78	62720	38	6	31	1	34
TMR_00605	tmRNA links to Rfam database...	0.53	0.53	0.53	57	74197	55	22	29	4	51
TMR_00606	tmRNA links to Rfam database...	0.53	0.52	0.54	56	68903	56	6	41	9	51
TMR_00609	tmRNA links to Rfam database...	0.73	0.73	0.73	83	63433	36	6	24	6	30
TMR_00610	tmRNA links to Rfam database...	0.67	0.65	0.68	68	62028	40	7	25	8	36
TMR_00611	tmRNA links to Rfam database...	0.76	0.78	0.74	80	61317	33	8	20	5	22
TMR_00612	tmRNA links to Rfam database...	0.50	0.53	0.47	55	60609	62	9	53	0	49
TMR_00614	tmRNA links to Rfam database...	0.60	0.58	0.63	60	60980	42	2	33	7	44
TMR_00615	tmRNA links to Rfam database...	0.49	0.47	0.51	45	63815	45	14	29	2	51
TMR_00616	tmRNA links to Rfam database...	0.26	0.26	0.26	26	67061	78	9	65	4	73
TMR_00617	tmRNA links to Rfam database...	0.39	0.43	0.36	25	34646	47	16	29	2	33
TMR_00623	tmRNA links to Rfam database...	0.50	0.47	0.53	51	61328	48	5	41	2	57
TMR_00624	tmRNA links to Rfam database...	0.73	0.72	0.73	78	62374	31	13	16	2	30
TMR_00625	tmRNA links to Rfam database...	0.32	0.34	0.31	36	78887	84	18	62	4	70
TMR_00626	tmRNA links to Rfam database...	0.43	0.43	0.43	47	67787	68	4	58	6	62
TMR_00680	tmRNA links to Rfam database...	0.25	0.26	0.25	26	67790	80	19	61	0	73
TMR_00681	tmRNA links to Rfam database...	0.48	0.47	0.49	46	65973	51	8	39	4	51
TMR_00683	tmRNA links to Rfam database...	0.26	0.27	0.26	27	82923	92	17	61	14	73
TMR_00686	tmRNA links to Rfam database...	0.33	0.34	0.32	37	71138	82	17	61	4	71
TMR_00687	tmRNA links to Rfam database...	0.25	0.25	0.24	28	71515	92	13	75	4	83
TMR_00696	tmRNA links to Rfam database...	0.47	0.44	0.50	50	84978	63	10	40	13	64
TMR_00698	tmRNA links to Rfam database...	0.16	0.16	0.16	17	63081	92	21	71	0	87
TMR_00699	tmRNA links to Rfam database...	0.41	0.41	0.41	42	67059	60	11	49	0	60
TMR_00702	tmRNA links to Rfam database...	0.25	0.26	0.25	26	67055	83	7	73	3	74
TMR_00703	tmRNA links to Rfam database...	0.38	0.37	0.40	37	67435	58	5	51	2	62
TMR_00706	tmRNA links to Rfam database...	0.44	0.41	0.47	42	66341	48	8	39	1	61
TMR_00711	tmRNA links to Rfam database...	0.55	0.56	0.53	55	67793	55	12	36	7	43
TMR_00712	tmRNA links to Rfam database...	0.27	0.28	0.26	30	78491	85	18	67	0	79
TMR_00716	tmRNA links to Rfam database...	0.12	0.12	0.13	12	62741	86	6	76	4	88

^top

Performance of CRWrnafold - scored lower in this pairwise comparison

1. Total counts & total scores for CRWrnafold

Total Base Pair Counts
Total TP	27194
Total TN	45989059
Total FP	44217
Total FP CONTRA	6703
Total FP INCONS	32153
Total FP COMP	5361
Total FN	38024

Total Scores
MCC	0.414
Average MCC ± 95% Confidence Intervals	0.418 ± 0.014
Sensitivity	0.417
Positive Predictive Value	0.412
Nr of predictions	669

^top

2. Individual counts for CRWrnafold [ download as .csv ]

RNA Chain	Rfam family	MCC	SENS	PPV	TP	TN	FP	FP CONTRA	FP INCONS	FP COMP	FN
ASE_00001	RNaseP_arch links to Rfam database...	0.61	0.57	0.64	43	34124	30	3	21	6	32
ASE_00002	RNaseP_arch links to Rfam database...	0.59	0.56	0.63	41	35446	31	2	22	7	32
ASE_00004	RNaseP_bact_a links to Rfam database...	0.69	0.68	0.69	66	47800	30	9	20	1	31
ASE_00005	RNaseP_bact_a links to Rfam database...	0.50	0.48	0.52	56	57863	51	3	48	0	61
ASE_00006	RNaseP_bact_a links to Rfam database...	0.29	0.29	0.30	27	47495	65	8	56	1	66
ASE_00007	RNaseP_bact_a links to Rfam database...	0.34	0.33	0.36	36	59585	65	3	61	1	74
ASE_00009	RNaseP_arch links to Rfam database...	0.68	0.67	0.69	45	26041	20	5	15	0	22
ASE_00012	RNaseP_bact_a links to Rfam database...	0.42	0.41	0.43	51	73800	75	6	63	6	72
ASE_00014	RNaseP_arch links to Rfam database...	0.47	0.47	0.47	50	54179	57	7	49	1	56
ASE_00017	RNaseP_nuc links to Rfam database...	0.25	0.28	0.22	18	50958	82	22	42	18	46
ASE_00018	RNaseP_bact_a links to Rfam database...	0.53	0.51	0.56	68	80480	54	4	49	1	66
ASE_00020	RNaseP_bact_a links to Rfam database...	0.63	0.60	0.68	75	73809	39	6	30	3	51
ASE_00021	RNaseP_bact_a links to Rfam database...	0.59	0.55	0.62	88	104055	57	8	45	4	72
ASE_00022	RNaseP_bact_b links to Rfam database...	0.49	0.46	0.51	57	82917	58	9	45	4	67
ASE_00023	RNaseP_bact_a links to Rfam database...	0.47	0.47	0.48	60	84129	72	9	57	6	67
ASE_00025	RNaseP_nuc links to Rfam database...	0.29	0.30	0.28	21	78531	108	10	44	54	50
ASE_00026	RNaseP_bact_a links to Rfam database...	0.30	0.30	0.30	33	59575	80	7	70	3	77
ASE_00028	RNaseP_bact_b links to Rfam database...	0.57	0.55	0.59	69	84550	54	9	38	7	57
ASE_00029	RNaseP_bact_a links to Rfam database...	0.50	0.48	0.51	59	82913	56	9	47	0	63
ASE_00030	RNaseP_bact_a links to Rfam database...	0.64	0.61	0.67	89	85359	44	4	39	1	56
ASE_00031	RNaseP_bact_a links to Rfam database...	0.39	0.38	0.39	48	86614	79	9	65	5	78
ASE_00032	RNaseP_bact_a links to Rfam database...	0.49	0.47	0.51	56	80090	62	3	51	8	62
ASE_00033	RNaseP_bact_a links to Rfam database...	0.35	0.34	0.36	41	64867	73	12	60	1	80
ASE_00035	RNaseP_bact_a links to Rfam database...	0.12	0.12	0.13	14	70389	100	12	85	3	104
ASE_00036	RNaseP_bact_a links to Rfam database...	0.60	0.58	0.62	77	75731	50	8	39	3	55
ASE_00037	RNaseP_bact_a links to Rfam database...	0.41	0.39	0.43	43	59240	59	5	52	2	67
ASE_00038	RNaseP_bact_a links to Rfam database...	0.55	0.53	0.57	54	53533	46	4	37	5	47
ASE_00040	RNaseP_bact_a links to Rfam database...	0.45	0.43	0.48	57	78883	69	4	59	6	76
ASE_00041	RNaseP_bact_a links to Rfam database...	0.39	0.36	0.41	39	57536	61	5	50	6	69
ASE_00042	RNaseP_bact_a links to Rfam database...	0.42	0.40	0.45	58	89970	75	6	66	3	87
ASE_00044	RNaseP_bact_a links to Rfam database...	0.78	0.76	0.79	80	54514	26	4	17	5	25
ASE_00046	RNaseP_bact_a links to Rfam database...	0.46	0.44	0.49	45	50311	49	6	41	2	58
ASE_00047	RNaseP_bact_a links to Rfam database...	0.34	0.32	0.36	42	74189	75	3	71	1	88
ASE_00052	RNaseP_bact_a links to Rfam database...	0.38	0.36	0.40	40	61325	65	4	56	5	72
ASE_00053	RNaseP_bact_a links to Rfam database...	0.45	0.44	0.46	59	79274	70	9	59	2	74
ASE_00056	-	0.33	0.33	0.33	24	30804	50	6	42	2	48
ASE_00057	RNaseP_bact_a links to Rfam database...	0.53	0.51	0.55	68	82091	63	8	48	7	66
ASE_00064	RNaseP_bact_a links to Rfam database...	0.35	0.35	0.35	31	45363	66	2	55	9	58
ASE_00066	RNaseP_bact_a links to Rfam database...	0.37	0.35	0.39	45	72276	71	4	65	2	85
ASE_00068	RNaseP_bact_a links to Rfam database...	0.21	0.20	0.22	17	37599	61	6	53	2	68
ASE_00069	RNaseP_bact_a links to Rfam database...	0.56	0.53	0.59	74	82903	54	7	44	3	66
ASE_00074	RNaseP_bact_a links to Rfam database...	0.50	0.49	0.51	58	67783	56	4	51	1	61
ASE_00075	RNaseP_bact_a links to Rfam database...	0.64	0.60	0.68	97	108669	49	5	40	4	65
ASE_00076	RNaseP_bact_a links to Rfam database...	0.57	0.54	0.61	64	68160	45	3	38	4	54
ASE_00077	RNaseP_bact_a links to Rfam database...	0.32	0.30	0.33	26	45072	58	8	44	6	60
ASE_00078	RNaseP_bact_a links to Rfam database...	0.12	0.12	0.12	10	42988	78	4	69	5	73
ASE_00079	RNaseP_bact_a links to Rfam database...	0.50	0.46	0.53	46	55525	43	2	38	3	54
ASE_00080	RNaseP_bact_a links to Rfam database...	0.35	0.33	0.36	41	71518	72	5	67	0	82
ASE_00081	RNaseP_bact_a links to Rfam database...	0.32	0.30	0.35	29	49686	56	3	52	1	68
ASE_00082	RNaseP_bact_a links to Rfam database...	0.45	0.41	0.49	48	70402	60	1	49	10	68
ASE_00083	RNaseP_bact_a links to Rfam database...	0.75	0.71	0.79	78	62382	28	1	20	7	32
ASE_00084	RNaseP_bact_a links to Rfam database...	0.39	0.38	0.40	38	53532	60	6	52	2	61
ASE_00087	RNaseP_bact_a links to Rfam database...	0.58	0.54	0.62	78	88285	48	3	44	1	66
ASE_00089	-	0.39	0.38	0.40	30	31300	46	1	44	1	49
ASE_00090	RNaseP_bact_a links to Rfam database...	0.61	0.61	0.61	62	55510	44	2	37	5	39
ASE_00092	RNaseP_bact_a links to Rfam database...	0.56	0.55	0.56	62	63436	53	9	39	5	51
ASE_00096	RNaseP_bact_a links to Rfam database...	0.35	0.35	0.36	40	63435	73	5	66	2	75
ASE_00099	RNaseP_bact_a links to Rfam database...	0.64	0.63	0.65	75	64505	41	4	36	1	45
ASE_00100	RNaseP_nuc links to Rfam database...	0.24	0.25	0.24	19	82135	112	11	50	51	57
ASE_00102	RNaseP_bact_a links to Rfam database...	0.24	0.23	0.25	38	117705	113	13	99	1	128
ASE_00104	RNaseP_bact_a links to Rfam database...	0.46	0.44	0.48	52	64153	57	3	53	1	67
ASE_00105	RNaseP_bact_a links to Rfam database...	0.47	0.46	0.49	51	64157	59	7	46	6	60
ASE_00107	RNaseP_bact_a links to Rfam database...	0.66	0.64	0.69	81	73036	37	2	34	1	46
ASE_00108	RNaseP_nuc links to Rfam database...	0.40	0.43	0.37	27	46898	73	13	33	27	36
ASE_00111	RNaseP_nuc links to Rfam database...	0.26	0.33	0.20	19	49990	87	31	46	10	38
ASE_00112	RNaseP_bact_a links to Rfam database...	0.60	0.59	0.61	69	75353	51	3	41	7	47
ASE_00115	RNaseP_bact_a links to Rfam database...	0.66	0.63	0.69	64	54522	37	4	25	8	37
ASE_00116	RNaseP_arch links to Rfam database...	0.04	0.05	0.05	3	31562	66	6	55	5	63
ASE_00118	RNaseP_bact_a links to Rfam database...	0.49	0.47	0.51	48	60631	53	2	45	6	54
ASE_00119	RNaseP_bact_a links to Rfam database...	0.86	0.84	0.88	91	62732	15	2	10	3	17
ASE_00120	RNaseP_arch links to Rfam database...	0.58	0.55	0.60	52	46885	34	4	30	0	42
ASE_00121	RNaseP_arch links to Rfam database...	0.43	0.42	0.43	39	45059	57	6	46	5	53
ASE_00122	RNaseP_bact_a links to Rfam database...	0.26	0.25	0.28	22	43286	62	2	55	5	66
ASE_00123	RNaseP_bact_a links to Rfam database...	0.35	0.33	0.37	28	38427	54	0	48	6	57
ASE_00125	RNaseP_bact_a links to Rfam database...	0.51	0.50	0.52	44	39255	42	4	37	1	44
ASE_00126	RNaseP_bact_a links to Rfam database...	0.38	0.37	0.39	30	40393	49	6	41	2	52
ASE_00128	RNaseP_bact_a links to Rfam database...	0.62	0.60	0.65	60	53208	37	6	27	4	40
ASE_00129	RNaseP_bact_a links to Rfam database...	0.64	0.60	0.67	67	62735	34	3	30	1	44
ASE_00131	RNaseP_bact_a links to Rfam database...	0.51	0.48	0.55	41	39265	39	1	33	5	44
ASE_00132	RNaseP_bact_a links to Rfam database...	0.22	0.22	0.23	21	50312	71	11	59	1	74
ASE_00134	RNaseP_bact_a links to Rfam database...	0.42	0.42	0.43	40	50310	59	5	48	6	55
ASE_00135	RNaseP_bact_a links to Rfam database...	0.46	0.46	0.46	50	63082	60	7	51	2	59
ASE_00136	RNaseP_bact_a links to Rfam database...	0.45	0.45	0.45	41	48114	54	8	42	4	51
ASE_00137	RNaseP_bact_a links to Rfam database...	0.37	0.37	0.37	36	48419	62	3	58	1	62
ASE_00138	RNaseP_bact_a links to Rfam database...	0.24	0.23	0.25	19	40395	61	5	51	5	62
ASE_00139	RNaseP_bact_a links to Rfam database...	0.61	0.58	0.64	60	54191	38	2	32	4	44
ASE_00140	RNaseP_bact_a links to Rfam database...	0.64	0.59	0.69	74	70769	34	7	26	1	51
ASE_00142	RNaseP_bact_a links to Rfam database...	0.70	0.66	0.73	81	67050	35	3	27	5	41
ASE_00145	RNaseP_arch links to Rfam database...	0.36	0.35	0.36	39	70018	73	5	63	5	72
ASE_00146	RNaseP_bact_a links to Rfam database...	0.49	0.47	0.52	58	70765	54	8	45	1	66
ASE_00148	RNaseP_arch links to Rfam database...	0.48	0.47	0.50	72	112432	71	10	61	0	82
ASE_00151	RNaseP_bact_a links to Rfam database...	0.41	0.39	0.43	38	51915	56	7	43	6	60
ASE_00153	RNaseP_nuc links to Rfam database...	0.68	0.68	0.67	50	57555	66	2	23	41	23
ASE_00154	RNaseP_arch links to Rfam database...	0.44	0.43	0.45	46	65239	60	4	52	4	61
ASE_00155	RNaseP_arch links to Rfam database...	0.40	0.40	0.41	57	93388	86	10	73	3	85
ASE_00163	RNaseP_bact_a links to Rfam database...	0.29	0.29	0.30	27	53210	73	5	59	9	66
ASE_00165	RNaseP_bact_a links to Rfam database...	0.44	0.43	0.46	43	52882	50	6	44	0	58
ASE_00168	RNaseP_nuc links to Rfam database...	0.18	0.22	0.15	14	60632	96	24	56	16	50
ASE_00169	RNaseP_bact_a links to Rfam database...	0.23	0.22	0.24	24	57192	78	4	71	3	83
ASE_00170	RNaseP_bact_a links to Rfam database...	0.66	0.65	0.67	60	48739	34	6	23	5	33
ASE_00171	RNaseP_bact_a links to Rfam database...	0.46	0.45	0.48	42	48429	45	5	40	0	52
ASE_00172	RNaseP_bact_a links to Rfam database...	0.56	0.54	0.58	57	58897	43	3	39	1	49
ASE_00174	RNaseP_bact_a links to Rfam database...	0.47	0.45	0.49	49	60976	53	4	46	3	60
ASE_00175	RNaseP_bact_a links to Rfam database...	0.24	0.24	0.25	26	59926	86	2	77	7	81
ASE_00176	RNaseP_bact_a links to Rfam database...	0.49	0.46	0.52	51	59932	49	9	39	1	59
ASE_00179	RNaseP_bact_a links to Rfam database...	0.56	0.56	0.56	47	44169	39	7	30	2	37
ASE_00180	RNaseP_bact_a links to Rfam database...	0.55	0.53	0.58	53	51268	40	8	31	1	47
ASE_00181	RNaseP_bact_a links to Rfam database...	0.42	0.42	0.43	44	57527	64	2	57	5	62
ASE_00182	RNaseP_bact_a links to Rfam database...	0.51	0.49	0.54	67	84130	58	4	54	0	69
ASE_00183	RNaseP_bact_a links to Rfam database...	0.55	0.53	0.57	60	61319	49	5	41	3	53
ASE_00184	RNaseP_bact_a links to Rfam database...	0.51	0.50	0.52	51	54516	49	4	44	1	51
ASE_00185	RNaseP_bact_a links to Rfam database...	0.64	0.62	0.66	79	73417	44	5	35	4	49
ASE_00186	RNaseP_bact_a links to Rfam database...	0.62	0.60	0.65	79	78882	47	4	38	5	53
ASE_00187	RNaseP_arch links to Rfam database...	0.33	0.31	0.35	36	68531	71	6	62	3	79
ASE_00189	RNaseP_bact_b links to Rfam database...	0.49	0.48	0.51	49	63094	51	3	44	4	53
ASE_00190	RNaseP_bact_b links to Rfam database...	0.52	0.51	0.53	46	45365	46	7	33	6	44
ASE_00192	RNaseP_bact_b links to Rfam database...	0.40	0.39	0.42	52	84542	78	11	61	6	81
ASE_00194	RNaseP_bact_b links to Rfam database...	0.41	0.40	0.42	48	73423	69	6	59	4	71
ASE_00195	-	0.61	0.61	0.62	81	86189	53	7	43	3	52
ASE_00196	RNaseP_arch links to Rfam database...	0.80	0.79	0.81	59	31553	20	2	12	6	16
ASE_00197	RNaseP_bact_a links to Rfam database...	0.57	0.54	0.60	79	89122	56	5	47	4	66
ASE_00198	RNaseP_bact_a links to Rfam database...	0.56	0.56	0.57	57	52550	43	7	36	0	45
ASE_00203	RNaseP_bact_a links to Rfam database...	0.62	0.61	0.63	59	46572	39	5	29	5	37
ASE_00204	RNaseP_bact_b links to Rfam database...	0.43	0.42	0.45	47	67791	63	7	51	5	65
ASE_00205	RNaseP_arch links to Rfam database...	0.45	0.46	0.44	41	45963	55	8	44	3	49
ASE_00209	RNaseP_arch links to Rfam database...	0.37	0.35	0.39	31	42992	50	4	44	2	57
ASE_00210	RNaseP_arch links to Rfam database...	0.48	0.48	0.49	31	27198	38	3	29	6	34
ASE_00212	RNaseP_bact_a links to Rfam database...	0.58	0.55	0.61	82	93826	57	4	49	4	66
ASE_00213	RNaseP_arch links to Rfam database...	0.60	0.61	0.60	40	27194	28	6	21	1	26
ASE_00214	RNaseP_bact_a links to Rfam database...	0.72	0.71	0.74	73	56181	37	4	22	11	30
ASE_00215	RNaseP_bact_a links to Rfam database...	0.46	0.44	0.47	44	48422	51	4	46	1	55
ASE_00216	RNaseP_bact_a links to Rfam database...	0.71	0.71	0.72	58	39259	23	7	16	0	24
ASE_00217	RNaseP_bact_a links to Rfam database...	0.26	0.24	0.28	22	40391	58	3	54	1	68
ASE_00221	RNaseP_bact_a links to Rfam database...	0.49	0.44	0.55	51	64527	45	1	41	3	66
ASE_00222	RNaseP_arch links to Rfam database...	0.62	0.61	0.63	96	111949	60	4	52	4	61
ASE_00227	RNaseP_bact_a links to Rfam database...	0.52	0.50	0.54	66	78881	56	4	52	0	67
ASE_00228	RNaseP_bact_a links to Rfam database...	0.34	0.34	0.35	29	46887	61	9	46	6	57
ASE_00229	RNaseP_bact_a links to Rfam database...	0.44	0.43	0.46	37	42405	47	5	39	3	50
ASE_00231	RNaseP_bact_a links to Rfam database...	0.62	0.63	0.63	60	47799	37	7	29	1	36
ASE_00232	RNaseP_bact_a links to Rfam database...	0.68	0.68	0.69	57	38420	27	8	18	1	27
ASE_00234	RNaseP_bact_a links to Rfam database...	0.52	0.50	0.55	64	75350	55	4	48	3	65
ASE_00237	RNaseP_nuc links to Rfam database...	0.09	0.11	0.07	6	45672	87	25	50	12	50
ASE_00238	RNaseP_bact_a links to Rfam database...	0.56	0.54	0.57	62	64152	51	3	44	4	52
ASE_00240	RNaseP_bact_a links to Rfam database...	0.04	0.04	0.05	4	46581	84	5	75	4	89
ASE_00241	RNaseP_bact_a links to Rfam database...	0.53	0.52	0.54	45	43873	46	2	36	8	42
ASE_00242	RNaseP_bact_a links to Rfam database...	0.48	0.46	0.50	51	60973	54	3	48	3	61
ASE_00246	RNaseP_nuc links to Rfam database...	0.18	0.21	0.16	14	48118	79	29	44	6	53
ASE_00247	RNaseP_nuc links to Rfam database...	0.40	0.41	0.39	26	54219	80	1	39	40	38
ASE_00248	RNaseP_bact_a links to Rfam database...	0.28	0.27	0.30	31	62378	72	7	65	0	83
ASE_00250	RNaseP_bact_a links to Rfam database...	0.51	0.50	0.52	65	78878	65	11	49	5	66
ASE_00252	RNaseP_bact_a links to Rfam database...	0.41	0.39	0.43	66	115288	91	6	80	5	102
ASE_00254	RNaseP_bact_a links to Rfam database...	0.62	0.61	0.64	50	36778	34	3	25	6	32
ASE_00255	RNaseP_bact_a links to Rfam database...	0.58	0.55	0.61	72	74573	52	4	42	6	58
ASE_00257	RNaseP_bact_a links to Rfam database...	0.53	0.53	0.53	51	50944	49	6	39	4	46
ASE_00259	RNaseP_bact_a links to Rfam database...	0.35	0.33	0.36	40	73043	72	7	63	2	81
ASE_00263	RNaseP_bact_a links to Rfam database...	0.77	0.77	0.77	92	70380	29	6	22	1	28
ASE_00264	RNaseP_nuc links to Rfam database...	0.41	0.41	0.41	41	49040	65	6	54	5	59
ASE_00267	RNaseP_bact_a links to Rfam database...	0.17	0.17	0.17	15	45064	77	8	63	6	73
ASE_00270	RNaseP_bact_a links to Rfam database...	0.62	0.59	0.65	76	72273	41	7	34	0	52
ASE_00274	RNaseP_bact_a links to Rfam database...	0.41	0.41	0.42	42	55512	57	10	47	0	61
ASE_00277	RNaseP_bact_a links to Rfam database...	0.30	0.30	0.31	27	48117	61	8	53	0	64
ASE_00279	RNaseP_bact_a links to Rfam database...	0.30	0.29	0.31	29	53208	64	10	54	0	72
ASE_00280	RNaseP_bact_a links to Rfam database...	0.42	0.42	0.43	41	51907	56	5	50	1	57
ASE_00281	RNaseP_bact_a links to Rfam database...	0.47	0.44	0.49	39	44472	41	1	39	1	49
ASE_00282	RNaseP_bact_a links to Rfam database...	0.55	0.53	0.58	67	77699	54	7	42	5	60
ASE_00283	RNaseP_bact_a links to Rfam database...	0.73	0.72	0.75	77	61673	30	3	23	4	30
ASE_00284	RNaseP_bact_a links to Rfam database...	0.52	0.51	0.52	55	58206	52	7	43	2	53
ASE_00285	RNaseP_bact_a links to Rfam database...	0.50	0.48	0.53	58	68897	54	7	44	3	64
ASE_00286	RNaseP_bact_a links to Rfam database...	0.28	0.28	0.29	26	46574	70	8	57	5	66
ASE_00287	RNaseP_bact_a links to Rfam database...	0.34	0.32	0.36	33	54854	63	5	54	4	70
ASE_00288	RNaseP_bact_a links to Rfam database...	0.36	0.33	0.39	31	45976	53	4	45	4	62
ASE_00289	RNaseP_bact_a links to Rfam database...	0.42	0.40	0.44	63	100883	83	7	72	4	94
ASE_00291	-	0.54	0.53	0.55	50	48425	44	0	41	3	44
ASE_00292	RNaseP_bact_a links to Rfam database...	0.45	0.43	0.48	59	81687	65	5	59	1	79
ASE_00294	RNaseP_bact_a links to Rfam database...	0.38	0.36	0.41	61	114334	89	2	84	3	110
ASE_00295	RNaseP_bact_a links to Rfam database...	0.37	0.35	0.39	46	73803	74	4	67	3	85
ASE_00296	RNaseP_bact_a links to Rfam database...	0.21	0.21	0.22	30	91671	105	6	99	0	115
ASE_00297	RNaseP_bact_a links to Rfam database...	0.54	0.54	0.54	53	52877	48	5	40	3	45
ASE_00298	RNaseP_bact_a links to Rfam database...	0.41	0.39	0.43	44	67425	66	1	58	7	69
ASE_00299	RNaseP_bact_a links to Rfam database...	0.45	0.46	0.45	46	49353	64	7	49	8	54
ASE_00313	RNaseP_nuc links to Rfam database...	0.62	0.62	0.62	55	62392	56	5	29	22	34
ASE_00316	RNaseP_nuc links to Rfam database...	0.58	0.60	0.55	59	107773	85	13	35	37	39
ASE_00318	RNaseP_bact_b links to Rfam database...	0.53	0.53	0.54	62	80086	56	11	41	4	56
ASE_00327	RNaseP_nuc links to Rfam database...	0.71	0.71	0.71	63	57202	43	4	22	17	26
ASE_00328	RNaseP_bact_b links to Rfam database...	0.56	0.54	0.58	60	72668	47	7	36	4	52
ASE_00330	RNaseP_nuc links to Rfam database...	0.55	0.56	0.54	50	56188	56	6	36	14	40
ASE_00332	RNaseP_bact_a links to Rfam database...	0.55	0.54	0.57	74	81680	58	5	51	2	64
ASE_00335	RNaseP_bact_b links to Rfam database...	0.53	0.52	0.55	60	75356	56	10	40	6	56
ASE_00337	RNaseP_nuc links to Rfam database...	0.29	0.31	0.28	22	39262	66	11	45	10	49
ASE_00338	RNaseP_nuc links to Rfam database...	0.35	0.35	0.35	34	66332	80	7	57	16	64
ASE_00339	RNaseP_bact_a links to Rfam database...	0.47	0.46	0.48	55	80086	67	15	44	8	64
ASE_00340	RNaseP_bact_a links to Rfam database...	0.32	0.32	0.32	27	45971	62	10	48	4	58
ASE_00342	RNaseP_bact_a links to Rfam database...	0.55	0.52	0.58	60	62378	47	2	41	4	55
ASE_00343	RNaseP_bact_a links to Rfam database...	0.28	0.29	0.27	33	83312	97	13	78	6	80
ASE_00346	RNaseP_arch links to Rfam database...	0.45	0.44	0.47	43	48113	53	5	44	4	54
ASE_00353	RNaseP_bact_a links to Rfam database...	0.38	0.38	0.38	41	57863	70	3	63	4	66
ASE_00359	RNaseP_arch links to Rfam database...	0.27	0.28	0.27	22	42695	61	8	53	0	58
ASE_00360	RNaseP_arch links to Rfam database...	0.30	0.29	0.30	19	29340	46	10	34	2	46
ASE_00361	RNaseP_bact_a links to Rfam database...	0.47	0.45	0.50	57	75352	61	9	48	4	70
ASE_00362	RNaseP_bact_a links to Rfam database...	0.63	0.62	0.64	56	48117	36	4	28	4	35
ASE_00363	RNaseP_bact_a links to Rfam database...	0.34	0.34	0.34	32	51267	68	4	57	7	62
ASE_00364	RNaseP_bact_a links to Rfam database...	0.44	0.42	0.46	44	54189	58	4	48	6	61
ASE_00366	RNaseP_bact_a links to Rfam database...	0.42	0.42	0.41	41	58554	62	13	45	4	57
ASE_00367	RNaseP_bact_a links to Rfam database...	0.26	0.27	0.26	23	42982	69	8	58	3	63
ASE_00369	RNaseP_bact_a links to Rfam database...	0.65	0.64	0.67	68	55844	38	4	29	5	39
ASE_00370	RNaseP_bact_a links to Rfam database...	0.51	0.50	0.51	42	41823	47	4	36	7	42
ASE_00372	RNaseP_bact_a links to Rfam database...	0.59	0.59	0.58	59	51902	44	8	34	2	41
ASE_00374	RNaseP_bact_a links to Rfam database...	0.19	0.18	0.20	16	44769	65	13	52	0	72
ASE_00375	RNaseP_bact_a links to Rfam database...	0.68	0.64	0.73	70	60282	30	1	25	4	40
ASE_00376	RNaseP_bact_a links to Rfam database...	0.43	0.43	0.44	45	56851	57	3	54	0	60
ASE_00377	RNaseP_bact_a links to Rfam database...	0.68	0.66	0.70	71	57529	36	4	26	6	36
ASE_00379	RNaseP_bact_a links to Rfam database...	0.44	0.43	0.45	38	45971	53	6	41	6	51
ASE_00380	RNaseP_bact_a links to Rfam database...	0.54	0.53	0.56	52	54853	45	7	34	4	47
ASE_00382	RNaseP_bact_a links to Rfam database...	0.42	0.42	0.42	35	41822	52	7	41	4	49
ASE_00383	RNaseP_bact_a links to Rfam database...	0.32	0.31	0.34	33	54517	65	4	61	0	72
ASE_00384	RNaseP_bact_a links to Rfam database...	0.31	0.30	0.31	28	48427	61	3	58	0	64
ASE_00385	RNaseP_bact_a links to Rfam database...	0.24	0.25	0.24	20	41822	64	10	53	1	61
ASE_00386	RNaseP_bact_a links to Rfam database...	0.39	0.39	0.41	37	50312	58	7	47	4	59
ASE_00387	RNaseP_bact_a links to Rfam database...	0.46	0.45	0.47	47	55844	57	5	49	3	57
ASE_00388	RNaseP_bact_a links to Rfam database...	0.33	0.33	0.33	29	45665	65	5	54	6	60
ASE_00390	RNaseP_bact_a links to Rfam database...	0.20	0.19	0.21	16	42119	67	2	58	7	69
ASE_00393	RNaseP_bact_a links to Rfam database...	0.24	0.24	0.26	22	47809	71	4	60	7	71
ASE_00394	RNaseP_bact_a links to Rfam database...	0.56	0.55	0.57	51	46882	39	3	35	1	42
ASE_00395	RNaseP_bact_a links to Rfam database...	0.39	0.39	0.39	33	41532	58	4	47	7	51
ASE_00396	RNaseP_bact_a links to Rfam database...	0.13	0.13	0.14	11	41535	72	4	66	2	72
ASE_00397	RNaseP_bact_a links to Rfam database...	0.52	0.50	0.55	52	54520	47	3	40	4	53
ASE_00398	RNaseP_bact_a links to Rfam database...	0.59	0.56	0.62	58	55851	45	3	33	9	46
ASE_00400	RNaseP_bact_a links to Rfam database...	0.53	0.52	0.53	55	57867	49	4	44	1	51
ASE_00401	RNaseP_bact_a links to Rfam database...	0.58	0.57	0.58	72	76904	52	11	41	0	54
ASE_00402	RNaseP_bact_a links to Rfam database...	0.28	0.27	0.29	23	42408	56	2	53	1	62
ASE_00403	RNaseP_bact_a links to Rfam database...	0.49	0.47	0.51	50	55847	52	3	45	4	57
ASE_00404	RNaseP_bact_a links to Rfam database...	0.24	0.24	0.25	20	42991	65	4	56	5	65
ASE_00406	RNaseP_bact_a links to Rfam database...	0.25	0.24	0.26	23	48739	73	5	61	7	71
ASE_00408	-	0.49	0.49	0.48	35	32312	42	3	35	4	36
ASE_00409	-	0.48	0.48	0.48	40	40958	43	5	38	0	43
ASE_00411	RNaseP_bact_a links to Rfam database...	0.24	0.24	0.24	21	49369	71	5	60	6	68
ASE_00412	RNaseP_bact_a links to Rfam database...	0.57	0.55	0.60	58	58214	42	6	33	3	47
ASE_00413	RNaseP_bact_a links to Rfam database...	0.28	0.30	0.27	24	44462	65	14	51	0	57
ASE_00414	RNaseP_bact_a links to Rfam database...	0.24	0.23	0.25	22	46273	70	5	60	5	73
ASE_00415	RNaseP_bact_a links to Rfam database...	0.41	0.41	0.42	42	54845	61	9	50	2	61
ASE_00416	RNaseP_bact_a links to Rfam database...	0.46	0.45	0.48	57	77301	69	8	55	6	70
ASE_00417	RNaseP_arch links to Rfam database...	0.48	0.48	0.48	48	54515	54	8	44	2	52
ASE_00418	RNaseP_arch links to Rfam database...	0.18	0.19	0.17	14	38699	70	7	61	2	61
ASE_00419	RNaseP_bact_a links to Rfam database...	0.72	0.68	0.76	70	54854	27	3	19	5	33
ASE_00422	RNaseP_bact_a links to Rfam database...	0.71	0.69	0.73	65	46882	30	2	22	6	29
ASE_00423	RNaseP_bact_a links to Rfam database...	0.65	0.65	0.65	71	56844	39	9	29	1	38
ASE_00426	RNaseP_bact_a links to Rfam database...	0.22	0.21	0.22	23	60972	80	7	73	0	85
ASE_00428	RNaseP_bact_a links to Rfam database...	0.53	0.50	0.55	63	76522	55	8	43	4	62
ASE_00429	-	0.45	0.45	0.45	30	28137	38	6	30	2	36
ASE_00430	RNaseP_bact_a links to Rfam database...	0.68	0.66	0.71	64	46881	32	3	23	6	33
ASE_00431	RNaseP_bact_a links to Rfam database...	0.35	0.34	0.38	32	46275	56	5	48	3	63
ASE_00434	RNaseP_bact_b links to Rfam database...	0.50	0.50	0.50	55	68154	64	10	46	8	55
ASE_00437	RNaseP_bact_a links to Rfam database...	0.33	0.32	0.34	43	79274	84	6	78	0	92
ASE_00438	RNaseP_bact_a links to Rfam database...	0.47	0.45	0.49	52	65959	55	5	50	0	64
ASE_00441	RNaseP_bact_a links to Rfam database...	0.82	0.76	0.89	85	64166	20	1	9	10	27
ASE_00447	RNaseP_bact_a links to Rfam database...	0.45	0.43	0.48	50	60273	59	1	54	4	66
ASE_00448	RNaseP_bact_a links to Rfam database...	0.18	0.18	0.18	20	64148	99	6	87	6	92
ASE_00451	RNaseP_bact_a links to Rfam database...	0.42	0.41	0.44	51	70759	66	3	63	0	74
CRW_00004	-	0.47	0.47	0.46	62	154156	105	9	63	33	69
CRW_00005	-	0.52	0.52	0.53	68	137947	87	4	56	27	64
CRW_00007	-	0.21	0.23	0.20	31	144834	131	39	87	5	102
CRW_00009	-	0.51	0.53	0.50	73	137928	97	15	59	23	65
CRW_00010	-	0.52	0.54	0.51	68	102698	81	8	57	16	58
CRW_00011	-	0.63	0.66	0.60	91	118190	69	9	51	9	47
CRW_00012	-	0.18	0.20	0.16	28	146981	148	34	110	4	113
CRW_00013	Intron_gpI links to Rfam database...	0.24	0.25	0.24	29	103617	106	20	74	12	86
CRW_00014	-	0.43	0.44	0.42	54	103612	86	9	65	12	69
CRW_00016	Intron_gpI links to Rfam database...	0.59	0.56	0.61	67	77312	55	6	36	13	53
CRW_00017	-	0.49	0.52	0.47	47	92135	81	13	40	28	44
CRW_00018	-	0.37	0.45	0.31	54	182538	132	48	70	14	67
CRW_00019	-	0.74	0.75	0.73	103	127624	60	8	30	22	34
CRW_00423	-	0.14	0.15	0.13	28	242337	197	39	152	6	161
CRW_00429	-	0.16	0.17	0.15	39	306679	223	33	185	5	194
CRW_00443	-	0.31	0.30	0.32	79	456243	194	27	141	26	181
CRW_00605	-	0.37	0.39	0.35	27	183843	150	17	34	99	43
CRW_00608	-	0.64	0.63	0.64	50	35700	30	6	22	2	29
CRW_00610	Intron_gpI links to Rfam database...	0.46	0.44	0.48	36	36240	39	7	32	0	45
CRW_00611	-	0.80	0.79	0.81	59	31302	17	4	10	3	16
CRW_00612	-	0.22	0.27	0.18	25	270342	207	29	84	94	68
CRW_00613	Intron_gpI links to Rfam database...	0.79	0.74	0.84	58	34911	19	0	11	8	20
CRW_00614	Intron_gpI links to Rfam database...	0.09	0.11	0.08	6	121691	140	26	48	66	51
CRW_00618	Intron_gpI links to Rfam database...	0.20	0.21	0.19	13	56212	77	12	43	22	48
CRW_00619	Intron_gpI links to Rfam database...	0.23	0.26	0.20	19	164932	156	20	54	82	54
CRW_00620	Intron_gpI links to Rfam database...	0.17	0.21	0.14	13	150882	154	25	55	74	50
CRW_00621	Intron_gpI links to Rfam database...	0.17	0.17	0.17	12	153109	150	13	47	90	59
CRW_00623	Intron_gpI links to Rfam database...	0.13	0.14	0.11	12	129686	140	24	73	43	71
CRW_00626	-	0.47	0.54	0.41	56	100890	91	28	51	12	48
CRW_00629	-	0.50	0.52	0.49	63	91250	67	18	47	2	59
CRW_00632	-	0.55	0.55	0.55	71	82900	65	8	49	8	57
CRW_00633	Intron_gpI links to Rfam database...	0.39	0.42	0.38	44	63429	73	15	58	0	62
CRW_00634	Intron_gpI links to Rfam database...	0.25	0.28	0.22	26	64504	92	23	67	2	68
CRW_00635	-	0.38	0.38	0.38	52	109140	92	16	70	6	85
CRW_00636	-	0.48	0.49	0.46	70	114809	89	16	65	8	73
CRW_00637	-	0.47	0.48	0.46	76	133738	95	13	76	6	82
CRW_00639	-	0.50	0.52	0.48	72	126607	82	23	54	5	66
CRW_00641	-	0.36	0.37	0.36	28	39825	58	12	38	8	48
CRW_00642	-	0.43	0.46	0.41	30	47204	58	7	37	14	35
CRW_00643	-	0.38	0.41	0.36	50	123116	107	25	65	17	72
CRW_00645	-	0.81	0.84	0.78	56	35439	25	6	10	9	11
CRW_00646	-	0.50	0.53	0.47	34	34907	45	7	32	6	30
CRW_00648	-	0.27	0.28	0.27	42	137917	119	18	98	3	106
CRW_00649	-	0.60	0.64	0.56	79	204340	131	8	53	70	45
CRW_00650	-	0.33	0.34	0.33	48	112906	101	7	89	5	94
CRW_00651	-	0.25	0.26	0.24	32	99992	106	21	83	2	89
CRW_00652	-	0.57	0.59	0.55	77	132214	90	12	52	26	53
CRW_00653	-	0.66	0.66	0.65	89	94693	55	5	43	7	45
CRW_00654	-	0.83	0.82	0.83	102	78087	26	2	19	5	22
CRW_00655	-	0.67	0.68	0.67	84	89127	48	7	35	6	40
CRW_00656	-	0.37	0.36	0.38	46	90403	78	10	66	2	83
CRW_00657	-	0.79	0.79	0.78	108	105891	35	3	28	4	28
CRW_00658	-	0.34	0.35	0.32	36	74579	79	17	59	3	66
CRW_00659	-	0.30	0.33	0.28	20	32314	59	14	37	8	41
CRW_00660	-	0.54	0.55	0.54	33	22094	31	5	23	3	27
CRW_00661	-	0.00	0.00	0.00	0	24242	68	20	48	0	51
CRW_00662	-	0.41	0.42	0.41	27	28614	48	7	32	9	38
CRW_00663	-	0.00	0.00	0.00	0	26036	71	11	59	1	61
CRW_00664	-	0.19	0.21	0.18	16	53540	83	16	56	11	62
CRW_00665	-	0.00	0.00	0.00	0	23592	63	19	42	2	48
CRW_00666	-	0.37	0.39	0.35	49	96002	94	14	76	4	77
CRW_00668	-	0.31	0.32	0.31	48	163723	122	15	92	15	102
CRW_00669	-	0.30	0.31	0.28	37	97331	97	21	72	4	82
CRW_00670	Intron_gpI links to Rfam database...	0.45	0.47	0.44	56	69999	70	9	61	0	64
CRW_00671	Intron_gpI links to Rfam database...	0.61	0.58	0.64	68	62728	44	7	32	5	49
CRW_00672	Intron_gpI links to Rfam database...	0.76	0.77	0.75	85	72276	39	6	23	10	26
CRW_00673	-	0.70	0.75	0.65	79	100006	60	22	21	17	26
CRW_00674	Intron_gpI links to Rfam database...	0.55	0.55	0.56	68	83314	58	12	42	4	56
CRW_00676	Intron_gpI links to Rfam database...	0.52	0.57	0.47	65	93390	78	24	49	5	50
CRW_00677	-	0.52	0.53	0.51	56	71901	57	12	41	4	49
CRW_00679	-	0.36	0.37	0.35	40	76523	79	13	60	6	67
CRW_00681	-	0.21	0.22	0.19	25	112920	115	20	85	10	87
CRW_00685	-	0.55	0.61	0.50	65	156949	98	21	45	32	41
CRW_00686	-	0.36	0.38	0.35	47	95133	94	11	75	8	78
CRW_00687	-	0.58	0.62	0.54	41	28604	35	5	30	0	25
CRW_00688	-	0.62	0.65	0.59	37	21882	27	10	16	1	20
CRW_00689	-	0.66	0.70	0.62	54	33583	35	11	22	2	23
CRW_00690	-	0.54	0.54	0.54	37	33342	37	6	26	5	32
CRW_00691	-	0.53	0.55	0.51	37	27188	37	4	32	1	30
CRW_00692	Intron_gpI links to Rfam database...	0.39	0.40	0.39	36	68542	75	10	47	18	54
CRW_00693	-	0.58	0.60	0.56	73	89123	65	9	48	8	49
CRW_00694	-	0.61	0.61	0.60	75	85781	55	11	38	6	47
CRW_00699	-	0.58	0.58	0.59	73	91682	58	4	47	7	53
CRW_00700	-	0.54	0.56	0.52	82	180743	98	17	59	22	65
CRW_00702	-	0.24	0.35	0.16	26	357274	237	91	44	102	49
CRW_00703	-	0.23	0.26	0.21	17	40388	72	20	45	7	49
CRW_00704	-	0.82	0.81	0.83	76	386668	201	0	16	185	18
CRW_00714	-	0.43	0.49	0.38	52	186219	130	20	64	46	55
CRW_00715	-	0.69	0.68	0.70	71	69276	33	2	29	2	33
CRW_00716	-	0.68	0.71	0.66	63	193657	122	7	26	89	26
CRW_00717	-	0.33	0.33	0.34	49	153589	114	19	78	17	99
CRW_00718	-	0.23	0.22	0.23	42	189856	148	10	128	10	149
CRW_00719	-	0.40	0.42	0.38	38	230081	164	14	48	102	53
CRW_00720	-	0.10	0.11	0.09	10	208229	174	12	84	78	81
CRW_00721	-	0.59	0.57	0.61	39	58589	56	3	22	31	29
CRW_00764	-	0.09	0.09	0.09	18	252909	196	38	151	7	178
CRW_00775	-	0.19	0.20	0.18	42	314587	215	38	154	23	170
CRW_00780	-	0.13	0.13	0.13	34	475544	230	36	186	8	221
CRW_00794	-	0.25	0.25	0.25	62	434530	200	22	164	14	184
CRW_00796	-	0.13	0.13	0.14	30	384783	202	26	164	12	205
CRW_00815	-	0.46	0.48	0.43	76	159720	103	25	74	4	82
CRW_00816	-	0.37	0.40	0.34	52	143765	104	27	72	5	77
CRW_00820	-	0.46	0.48	0.45	69	136350	95	7	77	11	76
PDB_00005	Tymo_tRNA-like links to Rfam database...	0.88	0.79	1.00	11	935	0	0	0	0	3
PDB_00018	-	0.21	0.20	0.25	4	1019	12	2	10	0	16
PDB_00020	-	0.42	0.35	0.54	7	767	6	0	6	0	13
PDB_00041	-	0.70	0.50	1.00	6	624	0	0	0	0	6
PDB_00053	-	0.73	0.55	1.00	6	429	0	0	0	0	5
PDB_00056	-	0.93	0.88	1.00	14	616	0	0	0	0	2
PDB_00072	-	0.33	0.35	0.32	73	148015	152	34	118	0	137
PDB_00078	-	0.54	0.52	0.56	60	49662	48	5	43	0	55
PDB_00079	-	0.65	0.63	0.68	90	121638	72	11	32	29	52
PDB_00123	-	-0.01	0.00	0.00	0	4155	31	0	31	0	36
PDB_00124	-	-0.02	0.00	0.00	0	488	8	2	6	0	10
PDB_00128	-	0.80	0.71	0.91	10	485	1	0	1	0	4
PDB_00134	-	0.66	0.63	0.71	5	371	2	0	2	0	3
PDB_00138	-	0.79	0.63	1.00	5	373	0	0	0	0	3
PDB_00209	-	0.68	0.55	0.86	6	554	1	1	0	0	5
PDB_00243	-	0.76	0.58	1.00	7	623	0	0	0	0	5
PDB_00278	-	0.13	0.13	0.13	9	24908	59	5	54	0	63
PDB_00352	-	0.39	0.37	0.44	7	1209	9	0	9	0	12
PDB_00370	-	0.00	0.00	0.00	0	15179	46	13	33	0	25
PDB_00403	-	0.45	0.44	0.45	68	124598	92	18	66	8	85
PDB_00423	-	0.28	0.27	0.29	20	26726	50	5	45	0	54
PDB_00447	-	-0.01	0.00	0.00	0	7110	30	6	24	0	44
PDB_00571	tRNA links to Rfam database...	0.85	0.76	0.95	19	3301	1	1	0	0	6
PDB_00701	-	0.10	0.10	0.10	11	45344	96	10	86	0	98
PDB_00713	-	-0.01	0.00	0.00	0	1998	19	1	17	1	21
PDB_00716	HDV_ribozyme links to Rfam database...	-0.01	0.00	0.00	0	2680	22	0	21	1	23
PDB_00747	-	0.49	0.44	0.56	35	24468	28	2	26	0	45
PDB_00804	-	0.00	0.00	0.00	0	15344	56	10	46	0	50
PDB_00827	Intron_gpI links to Rfam database...	0.69	0.63	0.76	51	26961	18	0	16	2	30
PDB_00828	Purine links to Rfam database...	0.88	0.78	1.00	21	2464	0	0	0	0	6
PDB_00829	Purine links to Rfam database...	0.86	0.75	1.00	18	2260	0	0	0	0	6
PDB_00842	-	0.79	0.63	1.00	5	373	0	0	0	0	3
PDB_00851	-	0.42	0.39	0.47	16	4719	18	4	14	0	25
PDB_00857	-	0.77	0.60	1.00	9	1072	0	0	0	0	6
PDB_00874	-	0.10	0.10	0.13	2	931	13	2	11	0	18
PDB_00886	-	-0.01	0.00	0.00	0	4152	34	0	34	0	40
PDB_00917	-	0.50	0.48	0.52	46	35156	48	5	38	5	49
PDB_00918	-	0.56	0.43	0.75	3	321	1	1	0	0	4
PDB_00919	RNaseP_bact_a links to Rfam database...	0.36	0.33	0.39	34	44165	56	6	48	2	69
PDB_01009	tRNA links to Rfam database...	0.90	0.90	0.90	19	2464	4	0	2	2	2
PDB_01020	Purine links to Rfam database...	0.86	0.74	1.00	17	2261	1	0	0	1	6
PDB_01040	-	0.31	0.30	0.35	6	1111	11	0	11	0	14
PDB_01059	-	0.56	0.43	0.75	3	227	1	1	0	0	4
PDB_01070	-	0.27	0.26	0.29	14	12672	34	0	34	0	40
PDB_01073	SAM links to Rfam database...	0.52	0.47	0.59	16	4344	12	1	10	1	18
PDB_01092	glmS links to Rfam database...	0.68	0.62	0.76	32	10111	12	1	9	2	20
PDB_01129	-	0.30	0.31	0.29	22	35435	58	23	31	4	49
PDB_01157	-	0.28	0.27	0.29	26	49997	63	13	50	0	72
PDB_01166	-	0.43	0.42	0.45	88	181909	116	23	86	7	124
PDB_01194	-	0.44	0.33	0.63	5	488	3	1	2	0	10
PDB_01201	-	0.82	0.68	1.00	15	1113	0	0	0	0	7
PDB_01203	-	0.74	0.68	0.81	13	1160	3	2	1	0	6
PDB_01250	-	0.15	0.15	0.16	6	12053	31	4	27	0	35
PDB_01260	-	0.44	0.36	0.56	9	1814	7	0	7	0	16
PDB_01281	-	-0.03	0.00	0.00	0	366	12	0	12	0	14
PDB_01299	-	-0.01	0.00	0.00	0	894	9	2	7	0	15
PDB_01309	-	-0.01	0.00	0.00	0	9122	58	7	51	0	39
RFA_00597	Telomerase-vert links to Rfam database...	0.23	0.26	0.21	28	97771	118	29	75	14	81
RFA_00598	Telomerase-vert links to Rfam database...	0.35	0.37	0.34	37	84557	94	11	61	22	64
RFA_00599	Telomerase-vert links to Rfam database...	0.69	0.72	0.67	80	101355	60	17	23	20	31
RFA_00600	Telomerase-vert links to Rfam database...	0.26	0.30	0.23	30	120165	121	30	70	21	70
RFA_00601	Telomerase-vert links to Rfam database...	0.51	0.54	0.50	61	99112	81	10	52	19	53
RFA_00602	Telomerase-vert links to Rfam database...	0.50	0.53	0.47	61	101346	90	13	55	22	55
RFA_00632	HDV_ribozyme links to Rfam database...	0.37	0.36	0.38	10	4069	19	0	16	3	18
RFA_00636	HDV_ribozyme links to Rfam database...	0.51	0.50	0.52	14	3978	13	3	10	0	14
RFA_00767	Corona_pk3 links to Rfam database...	0.59	0.56	0.63	10	1875	6	3	3	0	8
RFA_00768	Corona_pk3 links to Rfam database...	0.47	0.44	0.50	8	1875	8	1	7	0	10
RFA_00769	Corona_pk3 links to Rfam database...	0.54	0.56	0.53	10	1934	9	4	5	0	8
RFA_00770	Corona_pk3 links to Rfam database...	-0.01	0.00	0.00	0	2002	17	1	13	3	18
RFA_00773	Corona_pk3 links to Rfam database...	0.59	0.56	0.63	10	1937	6	1	5	0	8
RFA_00779	Corona_pk3 links to Rfam database...	0.59	0.56	0.63	10	1937	6	3	3	0	8
RFA_00808	RydC links to Rfam database...	-0.01	0.00	0.00	0	2000	18	2	14	2	16
RFA_00809	RydC links to Rfam database...	0.40	0.38	0.43	6	2131	8	1	7	0	10
TMR_00007	tmRNA links to Rfam database...	0.33	0.32	0.33	35	61671	74	8	62	4	73
TMR_00008	tmRNA links to Rfam database...	0.44	0.45	0.43	48	65955	71	13	50	8	58
TMR_00010	tmRNA links to Rfam database...	0.24	0.25	0.23	24	57866	86	14	66	6	72
TMR_00012	tmRNA links to Rfam database...	0.39	0.42	0.37	34	64528	74	20	38	16	47
TMR_00014	tmRNA links to Rfam database...	0.57	0.55	0.60	60	68535	48	5	35	8	50
TMR_00017	tmRNA links to Rfam database...	0.49	0.47	0.51	48	67067	52	11	35	6	54
TMR_00018	tmRNA links to Rfam database...	0.58	0.60	0.57	55	64523	47	13	29	5	37
TMR_00028	tmRNA links to Rfam database...	0.20	0.22	0.19	21	62727	88	13	74	1	76
TMR_00030	tmRNA links to Rfam database...	0.20	0.21	0.20	23	75739	96	19	74	3	88
TMR_00034	tmRNA links to Rfam database...	0.61	0.60	0.62	66	59924	47	11	30	6	44
TMR_00035	tmRNA links to Rfam database...	0.36	0.38	0.35	37	67790	77	9	60	8	61
TMR_00036	tmRNA links to Rfam database...	0.57	0.58	0.56	59	90420	75	9	37	29	42
TMR_00038	tmRNA links to Rfam database...	0.18	0.19	0.18	21	71137	101	12	83	6	89
TMR_00042	tmRNA links to Rfam database...	0.32	0.32	0.32	31	62739	68	8	57	3	67
TMR_00046	tmRNA links to Rfam database...	0.42	0.43	0.41	41	62736	64	12	46	6	55
TMR_00047	tmRNA links to Rfam database...	0.29	0.33	0.25	19	48439	72	17	41	14	38
TMR_00048	tmRNA links to Rfam database...	0.13	0.14	0.13	13	64876	98	11	80	7	82
TMR_00049	tmRNA links to Rfam database...	0.35	0.36	0.35	31	63102	70	7	50	13	56
TMR_00051	tmRNA links to Rfam database...	0.53	0.51	0.56	48	65617	56	5	33	18	46
TMR_00055	tmRNA links to Rfam database...	0.49	0.48	0.50	55	78892	60	9	47	4	59
TMR_00057	tmRNA links to Rfam database...	0.14	0.16	0.12	13	73810	104	28	69	7	66
TMR_00061	tmRNA links to Rfam database...	0.21	0.21	0.21	21	59587	85	8	69	8	78
TMR_00062	tmRNA links to Rfam database...	0.62	0.64	0.60	67	78494	58	14	31	13	37
TMR_00064	tmRNA links to Rfam database...	0.25	0.26	0.23	27	76912	90	21	68	1	76
TMR_00065	tmRNA links to Rfam database...	0.37	0.40	0.35	42	76517	79	22	55	2	64
TMR_00067	tmRNA links to Rfam database...	0.30	0.31	0.29	35	82093	87	16	71	0	79
TMR_00073	tmRNA links to Rfam database...	0.18	0.18	0.18	21	65588	94	8	86	0	96
TMR_00076	tmRNA links to Rfam database...	0.43	0.45	0.42	45	70769	67	12	50	5	55
TMR_00080	tmRNA links to Rfam database...	0.25	0.26	0.24	25	70396	79	21	58	0	71
TMR_00081	tmRNA links to Rfam database...	0.25	0.25	0.25	27	67054	80	17	63	0	79
TMR_00082	tmRNA links to Rfam database...	0.22	0.22	0.21	21	67798	83	19	58	6	75
TMR_00083	tmRNA links to Rfam database...	0.39	0.39	0.40	41	68162	70	5	57	8	64
TMR_00092	tmRNA links to Rfam database...	0.56	0.58	0.54	59	67418	57	13	38	6	42
TMR_00093	tmRNA links to Rfam database...	0.49	0.51	0.48	52	64153	59	12	44	3	50
TMR_00096	tmRNA links to Rfam database...	0.38	0.39	0.38	39	64877	72	11	53	8	61
TMR_00101	tmRNA links to Rfam database...	0.44	0.44	0.44	47	64154	66	9	51	6	60
TMR_00102	tmRNA links to Rfam database...	0.27	0.29	0.26	29	64148	85	22	62	1	72
TMR_00103	tmRNA links to Rfam database...	0.61	0.63	0.59	68	64146	48	15	32	1	40
TMR_00104	-	0.06	0.07	0.05	5	66702	97	32	56	9	65
TMR_00106	tmRNA links to Rfam database...	0.33	0.34	0.32	41	89973	89	24	62	3	79
TMR_00109	tmRNA links to Rfam database...	0.22	0.22	0.23	27	88291	99	18	74	7	95
TMR_00111	tmRNA links to Rfam database...	0.36	0.36	0.37	44	90405	84	14	62	8	78
TMR_00116	tmRNA links to Rfam database...	0.68	0.66	0.70	69	64881	43	6	24	13	35
TMR_00117	tmRNA links to Rfam database...	0.56	0.57	0.55	67	80079	59	15	39	5	51
TMR_00118	tmRNA links to Rfam database...	0.14	0.14	0.14	17	81287	108	16	86	6	103
TMR_00119	tmRNA links to Rfam database...	0.49	0.49	0.49	51	71905	59	13	41	5	53
TMR_00123	tmRNA links to Rfam database...	0.60	0.58	0.63	59	66336	40	6	29	5	42
TMR_00124	tmRNA links to Rfam database...	0.38	0.40	0.37	39	70395	74	19	47	8	59
TMR_00125	tmRNA links to Rfam database...	0.19	0.20	0.19	20	64153	90	17	71	2	79
TMR_00127	tmRNA links to Rfam database...	0.48	0.47	0.48	46	62740	55	5	44	6	51
TMR_00128	tmRNA links to Rfam database...	0.23	0.24	0.22	23	60970	88	14	68	6	73
TMR_00131	tmRNA links to Rfam database...	0.27	0.27	0.27	27	64881	80	14	58	8	72
TMR_00135	tmRNA links to Rfam database...	0.33	0.34	0.31	34	62726	77	21	54	2	65
TMR_00136	tmRNA links to Rfam database...	0.15	0.17	0.14	17	74570	104	23	81	0	84
TMR_00137	tmRNA links to Rfam database...	0.26	0.27	0.25	24	60978	77	17	56	4	65
TMR_00139	tmRNA links to Rfam database...	0.06	0.07	0.05	6	62015	111	25	82	4	85
TMR_00140	tmRNA links to Rfam database...	0.27	0.28	0.27	28	73815	92	6	71	15	72
TMR_00142	tmRNA links to Rfam database...	0.45	0.46	0.45	47	70771	69	16	42	11	55
TMR_00143	tmRNA links to Rfam database...	0.47	0.46	0.48	47	64523	60	8	42	10	56
TMR_00144	tmRNA links to Rfam database...	0.27	0.28	0.25	29	74191	88	18	67	3	74
TMR_00146	tmRNA links to Rfam database...	0.79	0.86	0.73	36	32082	43	9	4	30	6
TMR_00150	tmRNA links to Rfam database...	0.78	0.79	0.77	33	43028	51	3	7	41	9
TMR_00152	tmRNA links to Rfam database...	0.24	0.24	0.24	28	81288	100	11	79	10	87
TMR_00155	tmRNA links to Rfam database...	0.54	0.53	0.56	55	61678	52	7	36	9	49
TMR_00156	tmRNA links to Rfam database...	0.19	0.20	0.19	19	60280	84	11	68	5	78
TMR_00158	tmRNA links to Rfam database...	0.44	0.43	0.45	43	60630	58	9	44	5	56
TMR_00159	tmRNA links to Rfam database...	0.31	0.33	0.30	30	62029	80	14	55	11	62
TMR_00160	tmRNA links to Rfam database...	0.25	0.26	0.24	25	64516	79	13	66	0	70
TMR_00164	tmRNA links to Rfam database...	0.42	0.41	0.43	43	66696	64	6	50	8	63
TMR_00165	tmRNA links to Rfam database...	0.32	0.33	0.31	32	61673	80	12	59	9	65
TMR_00166	tmRNA links to Rfam database...	0.16	0.17	0.16	17	61672	90	10	77	3	84
TMR_00168	tmRNA links to Rfam database...	0.72	0.69	0.75	79	60970	30	0	26	4	35
TMR_00173	tmRNA links to Rfam database...	0.29	0.36	0.24	15	42133	75	20	27	28	27
TMR_00179	tmRNA links to Rfam database...	0.18	0.18	0.18	18	67060	91	18	65	8	80
TMR_00180	tmRNA links to Rfam database...	0.63	0.64	0.62	63	67059	50	11	28	11	36
TMR_00182	tmRNA links to Rfam database...	0.40	0.41	0.40	42	66325	68	8	55	5	60
TMR_00183	tmRNA links to Rfam database...	0.17	0.17	0.17	18	63084	93	10	78	5	85
TMR_00184	tmRNA links to Rfam database...	0.40	0.41	0.39	42	63081	69	6	61	2	60
TMR_00193	tmRNA links to Rfam database...	0.26	0.26	0.25	21	59256	70	19	44	7	59
TMR_00194	tmRNA links to Rfam database...	0.26	0.27	0.25	25	62735	78	16	59	3	68
TMR_00196	tmRNA links to Rfam database...	0.30	0.31	0.29	30	60972	73	18	55	0	67
TMR_00199	tmRNA links to Rfam database...	0.52	0.53	0.51	49	62739	54	13	34	7	43
TMR_00200	-	0.34	0.35	0.34	26	41539	60	4	47	9	49
TMR_00204	tmRNA links to Rfam database...	0.42	0.41	0.44	40	60287	60	16	35	9	57
TMR_00207	tmRNA links to Rfam database...	0.30	0.31	0.30	32	72282	83	7	69	7	71
TMR_00223	tmRNA links to Rfam database...	0.38	0.39	0.38	37	64164	64	13	47	4	58
TMR_00224	tmRNA links to Rfam database...	0.39	0.38	0.40	38	64886	62	9	47	6	63
TMR_00226	tmRNA links to Rfam database...	0.25	0.26	0.24	27	69639	90	15	70	5	78
TMR_00227	tmRNA links to Rfam database...	0.33	0.35	0.31	35	70011	82	19	60	3	66
TMR_00228	tmRNA links to Rfam database...	0.29	0.31	0.27	34	88286	95	24	66	5	74
TMR_00234	tmRNA links to Rfam database...	0.31	0.32	0.30	33	58885	80	11	67	2	69
TMR_00238	tmRNA links to Rfam database...	0.23	0.25	0.21	25	84548	99	20	73	6	76
TMR_00239	tmRNA links to Rfam database...	0.48	0.49	0.47	47	61677	54	10	42	2	49
TMR_00240	tmRNA links to Rfam database...	0.22	0.25	0.21	21	63088	84	23	58	3	64
TMR_00246	-	0.46	0.50	0.41	17	78169	106	7	17	82	17
TMR_00248	tmRNA links to Rfam database...	0.12	0.16	0.10	6	54224	99	21	34	44	32
TMR_00257	tmRNA links to Rfam database...	0.51	0.52	0.50	51	67058	57	10	42	5	47
TMR_00259	tmRNA links to Rfam database...	0.33	0.32	0.35	33	67801	69	11	51	7	70
TMR_00261	tmRNA links to Rfam database...	0.57	0.59	0.55	60	66685	53	17	33	3	41
TMR_00262	tmRNA links to Rfam database...	0.54	0.56	0.53	58	74195	58	14	38	6	46
TMR_00271	tmRNA links to Rfam database...	0.32	0.33	0.32	30	64166	73	10	55	8	61
TMR_00274	tmRNA links to Rfam database...	0.30	0.30	0.29	32	66684	84	14	65	5	73
TMR_00278	tmRNA links to Rfam database...	0.50	0.52	0.49	53	67788	65	9	46	10	49
TMR_00279	tmRNA links to Rfam database...	0.57	0.56	0.57	53	68913	50	5	35	10	41
TMR_00280	tmRNA links to Rfam database...	0.55	0.56	0.54	57	65961	63	3	45	15	44
TMR_00283	tmRNA links to Rfam database...	0.37	0.40	0.34	38	65230	76	18	55	3	58
TMR_00289	tmRNA links to Rfam database...	0.56	0.57	0.54	56	67058	58	14	33	11	42
TMR_00290	tmRNA links to Rfam database...	0.54	0.54	0.54	50	64168	49	12	31	6	42
TMR_00296	tmRNA links to Rfam database...	0.49	0.49	0.48	48	68907	62	11	40	11	50
TMR_00298	tmRNA links to Rfam database...	0.39	0.40	0.38	40	68160	71	11	54	6	61
TMR_00300	tmRNA links to Rfam database...	0.66	0.69	0.64	77	70379	47	12	32	3	35
TMR_00301	tmRNA links to Rfam database...	0.22	0.24	0.20	23	82102	90	20	70	0	73
TMR_00302	tmRNA links to Rfam database...	0.26	0.29	0.23	27	77305	98	24	65	9	67
TMR_00305	tmRNA links to Rfam database...	0.47	0.48	0.46	49	60969	57	16	41	0	53
TMR_00306	tmRNA links to Rfam database...	0.24	0.25	0.23	26	64147	88	19	69	0	80
TMR_00310	tmRNA links to Rfam database...	0.57	0.55	0.60	54	63813	48	6	30	12	44
TMR_00317	tmRNA links to Rfam database...	0.55	0.58	0.52	59	68151	58	15	40	3	43
TMR_00331	tmRNA links to Rfam database...	0.30	0.33	0.27	27	66695	84	10	63	11	55
TMR_00332	tmRNA links to Rfam database...	0.31	0.31	0.31	31	67062	76	14	54	8	68
TMR_00334	tmRNA links to Rfam database...	0.43	0.42	0.45	42	66701	61	5	47	9	59
TMR_00337	tmRNA links to Rfam database...	0.12	0.13	0.12	15	82902	111	14	97	0	104
TMR_00340	tmRNA links to Rfam database...	0.47	0.48	0.47	39	64178	66	7	37	22	42
TMR_00341	tmRNA links to Rfam database...	0.20	0.22	0.19	20	63086	90	18	66	6	72
TMR_00343	tmRNA links to Rfam database...	0.39	0.40	0.39	42	64872	66	9	57	0	63
TMR_00345	tmRNA links to Rfam database...	0.54	0.52	0.56	54	63806	50	5	38	7	50
TMR_00346	tmRNA links to Rfam database...	0.48	0.48	0.47	45	64166	59	4	46	9	49
TMR_00348	tmRNA links to Rfam database...	0.14	0.14	0.14	14	77320	104	17	70	17	85
TMR_00352	tmRNA links to Rfam database...	0.23	0.25	0.20	19	95172	114	24	51	39	56
TMR_00353	tmRNA links to Rfam database...	0.52	0.52	0.52	55	84149	64	12	39	13	50
TMR_00357	tmRNA links to Rfam database...	0.50	0.54	0.47	50	82921	72	21	36	15	42
TMR_00358	tmRNA links to Rfam database...	0.42	0.45	0.39	45	74964	76	26	43	7	54
TMR_00361	-	0.36	0.43	0.30	31	93425	89	27	45	17	41
TMR_00366	tmRNA links to Rfam database...	0.28	0.29	0.27	29	67789	85	19	59	7	71
TMR_00372	tmRNA links to Rfam database...	0.52	0.53	0.50	51	70399	64	8	42	14	45
TMR_00374	tmRNA links to Rfam database...	0.12	0.13	0.11	12	81704	112	27	67	18	80
TMR_00375	tmRNA links to Rfam database...	0.44	0.48	0.41	47	73422	72	20	47	5	51
TMR_00376	tmRNA links to Rfam database...	0.49	0.51	0.48	48	74590	71	13	40	18	47
TMR_00378	tmRNA links to Rfam database...	0.33	0.34	0.32	33	67792	78	13	58	7	64
TMR_00383	tmRNA links to Rfam database...	0.18	0.19	0.17	19	66685	93	14	77	2	81
TMR_00384	tmRNA links to Rfam database...	0.51	0.50	0.52	54	65600	54	5	44	5	54
TMR_00393	tmRNA links to Rfam database...	0.65	0.68	0.62	36	53243	57	8	14	35	17
TMR_00395	tmRNA links to Rfam database...	0.36	0.36	0.36	39	64513	70	7	61	2	70
TMR_00398	tmRNA links to Rfam database...	0.36	0.35	0.37	37	65240	68	4	60	4	69
TMR_00399	tmRNA links to Rfam database...	0.18	0.19	0.17	18	64876	88	17	69	2	76
TMR_00404	tmRNA links to Rfam database...	0.20	0.22	0.18	20	67418	93	24	66	3	72
TMR_00408	tmRNA links to Rfam database...	0.39	0.42	0.36	37	65964	74	24	41	9	51
TMR_00409	tmRNA links to Rfam database...	0.54	0.65	0.45	30	68569	87	14	22	51	16
TMR_00411	tmRNA links to Rfam database...	0.18	0.18	0.17	16	60981	91	18	60	13	71
TMR_00415	tmRNA links to Rfam database...	0.65	0.62	0.67	63	67067	35	5	26	4	38
TMR_00419	tmRNA links to Rfam database...	0.18	0.19	0.18	21	81694	101	12	83	6	90
TMR_00422	tmRNA links to Rfam database...	0.27	0.29	0.26	27	67792	87	18	59	10	65
TMR_00423	tmRNA links to Rfam database...	0.17	0.19	0.15	14	63810	94	19	60	15	59
TMR_00427	tmRNA links to Rfam database...	0.16	0.16	0.15	16	67421	96	15	76	5	81
TMR_00429	tmRNA links to Rfam database...	0.39	0.39	0.39	43	74580	78	10	58	10	66
TMR_00430	tmRNA links to Rfam database...	0.21	0.22	0.20	24	82500	100	25	72	3	85
TMR_00431	tmRNA links to Rfam database...	0.64	0.69	0.59	38	51939	56	15	11	30	17
TMR_00432	tmRNA links to Rfam database...	0.21	0.22	0.19	23	79682	102	13	82	7	81
TMR_00433	tmRNA links to Rfam database...	0.45	0.47	0.43	50	80083	68	18	49	1	56
TMR_00439	tmRNA links to Rfam database...	0.29	0.31	0.27	31	68522	86	15	67	4	70
TMR_00441	tmRNA links to Rfam database...	0.12	0.13	0.10	11	62021	99	26	70	3	72
TMR_00443	tmRNA links to Rfam database...	0.41	0.42	0.41	44	67053	72	15	49	8	60
TMR_00448	tmRNA links to Rfam database...	0.49	0.47	0.51	43	62043	50	6	36	8	49
TMR_00451	tmRNA links to Rfam database...	0.26	0.27	0.26	24	63454	75	9	59	7	65
TMR_00457	tmRNA links to Rfam database...	0.35	0.35	0.34	36	78500	78	8	62	8	66
TMR_00458	tmRNA links to Rfam database...	0.10	0.11	0.10	10	63450	94	8	78	8	83
TMR_00460	tmRNA links to Rfam database...	0.38	0.39	0.37	41	79289	76	11	60	5	65
TMR_00465	tmRNA links to Rfam database...	0.26	0.28	0.24	26	64154	81	22	59	0	68
TMR_00469	tmRNA links to Rfam database...	0.41	0.43	0.39	43	64511	66	15	51	0	57
TMR_00472	tmRNA links to Rfam database...	0.30	0.32	0.28	31	64509	82	20	60	2	66
TMR_00478	tmRNA links to Rfam database...	0.21	0.23	0.20	23	71895	95	15	77	3	76
TMR_00498	tmRNA links to Rfam database...	0.17	0.18	0.16	18	68894	100	17	77	6	81
TMR_00499	tmRNA links to Rfam database...	0.35	0.36	0.34	36	64513	78	8	63	7	63
TMR_00501	tmRNA links to Rfam database...	0.43	0.45	0.41	41	62382	63	8	50	5	51
TMR_00502	tmRNA links to Rfam database...	0.21	0.24	0.19	22	75350	98	20	74	4	71
TMR_00503	tmRNA links to Rfam database...	0.39	0.39	0.40	43	67788	73	6	59	8	68
TMR_00519	tmRNA links to Rfam database...	0.13	0.14	0.12	13	63083	94	17	77	0	82
TMR_00520	tmRNA links to Rfam database...	0.23	0.23	0.23	23	63088	87	8	71	8	76
TMR_00522	tmRNA links to Rfam database...	0.07	0.07	0.07	7	63085	104	14	84	6	90
TMR_00528	tmRNA links to Rfam database...	0.26	0.26	0.27	25	63096	77	16	53	8	72
TMR_00540	tmRNA links to Rfam database...	0.36	0.37	0.36	38	73429	70	18	51	1	66
TMR_00541	tmRNA links to Rfam database...	0.48	0.49	0.48	51	61670	65	5	50	10	54
TMR_00544	tmRNA links to Rfam database...	0.47	0.47	0.47	51	89568	71	17	40	14	57
TMR_00547	tmRNA links to Rfam database...	0.44	0.45	0.44	45	65238	58	9	49	0	55
TMR_00553	tmRNA links to Rfam database...	0.38	0.40	0.36	32	48116	57	22	35	0	49
TMR_00559	tmRNA links to Rfam database...	0.44	0.45	0.44	45	62379	62	11	46	5	56
TMR_00560	tmRNA links to Rfam database...	0.50	0.50	0.51	49	60979	54	4	43	7	49
TMR_00562	tmRNA links to Rfam database...	0.43	0.43	0.43	44	72668	66	15	44	7	58
TMR_00563	tmRNA links to Rfam database...	0.26	0.28	0.25	29	75348	93	21	68	4	74
TMR_00566	tmRNA links to Rfam database...	0.23	0.24	0.23	24	60622	84	15	65	4	76
TMR_00568	tmRNA links to Rfam database...	0.36	0.37	0.36	37	60622	72	15	52	5	62
TMR_00570	tmRNA links to Rfam database...	0.50	0.49	0.51	48	60284	54	7	39	8	49
TMR_00571	tmRNA links to Rfam database...	0.50	0.49	0.52	49	60631	55	6	40	9	50
TMR_00576	tmRNA links to Rfam database...	0.45	0.46	0.45	47	60273	65	12	46	7	55
TMR_00579	tmRNA links to Rfam database...	0.20	0.23	0.18	21	80484	101	22	74	5	69
TMR_00580	tmRNA links to Rfam database...	0.27	0.26	0.28	26	60633	75	6	61	8	74
TMR_00581	tmRNA links to Rfam database...	0.29	0.30	0.29	29	62380	78	12	60	6	69
TMR_00584	tmRNA links to Rfam database...	0.55	0.58	0.53	56	60969	53	10	40	3	41
TMR_00586	tmRNA links to Rfam database...	0.27	0.27	0.27	26	60978	76	12	59	5	71
TMR_00587	tmRNA links to Rfam database...	0.74	0.74	0.74	74	61325	31	7	19	5	26
TMR_00588	tmRNA links to Rfam database...	0.28	0.29	0.27	29	77315	87	14	63	10	72
TMR_00594	tmRNA links to Rfam database...	0.35	0.37	0.34	38	79289	76	18	56	2	66
TMR_00596	tmRNA links to Rfam database...	0.22	0.23	0.20	22	78102	92	22	64	6	73
TMR_00599	tmRNA links to Rfam database...	0.20	0.25	0.17	18	63083	90	37	52	1	54
TMR_00600	tmRNA links to Rfam database...	0.40	0.39	0.41	45	79691	67	4	60	3	70
TMR_00601	tmRNA links to Rfam database...	0.14	0.17	0.13	7	58940	96	11	38	47	35
TMR_00603	tmRNA links to Rfam database...	0.55	0.58	0.52	25	60330	84	4	19	61	18
TMR_00604	tmRNA links to Rfam database...	0.65	0.63	0.66	71	62728	40	2	34	4	41
TMR_00605	tmRNA links to Rfam database...	0.37	0.40	0.35	43	74183	82	20	59	3	65
TMR_00606	tmRNA links to Rfam database...	0.51	0.50	0.51	54	68900	60	8	44	8	53
TMR_00609	tmRNA links to Rfam database...	0.63	0.64	0.63	72	63431	43	17	26	0	41
TMR_00610	tmRNA links to Rfam database...	0.54	0.54	0.54	56	62025	58	9	38	11	48
TMR_00611	tmRNA links to Rfam database...	0.64	0.67	0.61	68	61314	47	8	35	4	34
TMR_00612	tmRNA links to Rfam database...	0.46	0.46	0.45	48	60620	62	6	52	4	56
TMR_00614	tmRNA links to Rfam database...	0.30	0.30	0.30	31	60972	78	10	62	6	73
TMR_00615	tmRNA links to Rfam database...	0.55	0.59	0.52	57	63793	56	19	34	3	39
TMR_00616	tmRNA links to Rfam database...	0.42	0.43	0.40	43	67054	70	10	54	6	56
TMR_00617	tmRNA links to Rfam database...	0.30	0.34	0.26	20	34638	61	18	40	3	38
TMR_00623	tmRNA links to Rfam database...	0.39	0.37	0.41	40	61328	64	2	55	7	68
TMR_00624	tmRNA links to Rfam database...	0.58	0.57	0.58	62	62374	51	9	36	6	46
TMR_00625	tmRNA links to Rfam database...	0.23	0.25	0.22	26	78883	98	25	69	4	80
TMR_00626	tmRNA links to Rfam database...	0.45	0.47	0.44	51	67779	69	16	50	3	58
TMR_00680	tmRNA links to Rfam database...	0.24	0.25	0.23	25	67787	89	16	68	5	74
TMR_00681	tmRNA links to Rfam database...	0.62	0.63	0.60	61	65965	50	7	33	10	36
TMR_00683	tmRNA links to Rfam database...	0.11	0.12	0.10	12	82902	120	29	85	6	88
TMR_00686	tmRNA links to Rfam database...	0.31	0.32	0.29	35	71133	96	17	68	11	73
TMR_00687	tmRNA links to Rfam database...	0.35	0.36	0.35	40	71516	76	13	62	1	71
TMR_00696	tmRNA links to Rfam database...	0.55	0.55	0.56	63	84965	68	9	41	18	51
TMR_00698	tmRNA links to Rfam database...	0.32	0.34	0.32	35	63079	76	20	56	0	69
TMR_00699	tmRNA links to Rfam database...	0.45	0.45	0.44	46	67057	58	10	48	0	56
TMR_00702	tmRNA links to Rfam database...	0.32	0.32	0.33	32	67063	70	8	58	4	68
TMR_00703	tmRNA links to Rfam database...	0.41	0.41	0.41	41	67427	62	9	51	2	58
TMR_00706	tmRNA links to Rfam database...	0.49	0.49	0.50	50	66329	55	4	47	4	53
TMR_00711	tmRNA links to Rfam database...	0.55	0.58	0.53	57	67788	57	15	36	6	41
TMR_00712	tmRNA links to Rfam database...	0.12	0.13	0.11	14	78482	112	29	81	2	95
TMR_00716	tmRNA links to Rfam database...	0.12	0.12	0.11	12	62730	101	9	84	8	88

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Matthews Correlation Coeffient, Sensitivity and Positive Predictive Value have been calculated based on the paper by Gardener & Giegerich, 2004.

Table of contents:

Overview

Performance plots

Performance of McQFold - scored higher in this pairwise comparison

1. Total counts & total scores for McQFold

2. Individual counts for McQFold [ download as .csv ]

Performance of CRWrnafold - scored lower in this pairwise comparison

1. Total counts & total scores for CRWrnafold

2. Individual counts for CRWrnafold [ download as .csv ]