CompaRNA - on-line benchmarks of RNA structure prediction methods

Laboratory of Structural Bioinformatics @ Adam Mickiewicz University in Poznan

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Overview

Metric	McQFold		Vsfold5
MCC	0.460	>	0.333
Average MCC ± 95% Confidence Intervals	0.479 ± 0.016	>	0.346 ± 0.015
Sensitivity	0.449	>	0.317
Positive Predictive Value	0.473	>	0.353
Total TP	24499	>	17272
Total TN	33297219	<	33300057
Total FP	30294	<	34447
Total FP CONTRA	4521	<	4615
Total FP INCONS	22740	<	27035
Total FP COMP	3033	>	2797
Total FN	30052	<	37279
P-value	3.56938820447e-08

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Performance plots

Comparison of performance of McQFold and Vsfold5. Positive Predictive Value (PPV) is plotted against sensitivity. Each dot represents a single test of each method. See tables below for raw data (individual counts for McQFold and Vsfold5).
Average Matthews Correlation Coefficients (MCC) with 95% confidence intervals (CIs) were plotted for different RNA families, for which at least 3 members were present in the benchmarking dataset. 'n' denotes the number of MCCs used to calculate the average and CI. See tables below for raw data (individual counts for McQFold and Vsfold5).
Comparison of average Matthews Correlation Coefficients (MCCs) for McQFold and Vsfold5. The whiskers correspond to 95% confidence intervals (CIs). 'n' denotes the number of MCCs used to calculate average MCCs and CIs. See tables below for raw data (individual counts for McQFold and Vsfold5).

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Performance of McQFold - scored higher in this pairwise comparison

1. Total counts & total scores for McQFold

Total Base Pair Counts
Total TP	24499
Total TN	33297219
Total FP	30294
Total FP CONTRA	4521
Total FP INCONS	22740
Total FP COMP	3033
Total FN	30052

Total Scores
MCC	0.460
Average MCC ± 95% Confidence Intervals	0.479 ± 0.016
Sensitivity	0.449
Positive Predictive Value	0.473
Nr of predictions	591

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2. Individual counts for McQFold [ download as .csv ]

RNA Chain	Rfam family	MCC	SENS	PPV	TP	TN	FP	FP CONTRA	FP INCONS	FP COMP	FN
ASE_00001	RNaseP_arch links to Rfam database...	0.78	0.73	0.82	55	34124	17	7	5	5	20
ASE_00002	RNaseP_arch links to Rfam database...	0.80	0.75	0.86	55	35447	12	4	5	3	18
ASE_00004	RNaseP_bact_a links to Rfam database...	0.50	0.48	0.52	47	47805	48	9	34	5	50
ASE_00005	RNaseP_bact_a links to Rfam database...	0.52	0.46	0.59	54	57878	40	0	38	2	63
ASE_00006	RNaseP_bact_a links to Rfam database...	0.35	0.34	0.36	32	47498	60	6	50	4	61
ASE_00007	RNaseP_bact_a links to Rfam database...	0.42	0.39	0.46	43	59591	55	2	49	4	67
ASE_00009	RNaseP_arch links to Rfam database...	0.67	0.64	0.70	43	26045	18	3	15	0	24
ASE_00012	RNaseP_bact_a links to Rfam database...	0.42	0.39	0.46	48	73816	61	3	53	5	75
ASE_00014	RNaseP_arch links to Rfam database...	0.47	0.47	0.48	50	54180	56	9	46	1	56
ASE_00017	RNaseP_nuc links to Rfam database...	0.18	0.20	0.17	13	50963	78	25	39	14	51
ASE_00018	RNaseP_bact_a links to Rfam database...	0.54	0.51	0.57	68	80482	52	2	49	1	66
ASE_00020	RNaseP_bact_a links to Rfam database...	0.47	0.47	0.48	59	73797	64	9	55	0	67
ASE_00022	RNaseP_bact_b links to Rfam database...	0.60	0.56	0.65	70	82920	45	5	33	7	54
ASE_00023	RNaseP_bact_a links to Rfam database...	0.57	0.57	0.58	72	84131	57	6	46	5	55
ASE_00025	RNaseP_nuc links to Rfam database...	0.36	0.37	0.35	26	78531	92	6	43	43	45
ASE_00026	RNaseP_bact_a links to Rfam database...	0.34	0.31	0.38	34	59595	58	7	49	2	76
ASE_00028	RNaseP_bact_b links to Rfam database...	0.56	0.54	0.59	68	84550	50	11	37	2	58
ASE_00029	RNaseP_bact_a links to Rfam database...	0.53	0.49	0.58	60	82924	48	3	41	4	62
ASE_00030	RNaseP_bact_a links to Rfam database...	0.59	0.56	0.62	81	85360	51	6	44	1	64
ASE_00031	RNaseP_bact_a links to Rfam database...	0.54	0.50	0.58	63	86627	56	5	41	10	63
ASE_00032	RNaseP_bact_a links to Rfam database...	0.61	0.58	0.64	69	80093	39	12	26	1	49
ASE_00033	RNaseP_bact_a links to Rfam database...	0.38	0.34	0.42	41	64883	57	3	53	1	80
ASE_00035	RNaseP_bact_a links to Rfam database...	0.29	0.27	0.32	32	70401	71	9	58	4	86
ASE_00036	RNaseP_bact_a links to Rfam database...	0.48	0.45	0.50	60	75736	64	8	51	5	72
ASE_00037	RNaseP_bact_a links to Rfam database...	0.42	0.38	0.46	42	59248	50	5	45	0	68
ASE_00038	RNaseP_bact_a links to Rfam database...	0.41	0.39	0.43	39	53538	53	3	48	2	62
ASE_00040	RNaseP_bact_a links to Rfam database...	0.27	0.26	0.29	34	78886	88	9	74	5	99
ASE_00041	RNaseP_bact_a links to Rfam database...	0.46	0.43	0.51	46	57539	48	6	39	3	62
ASE_00044	RNaseP_bact_a links to Rfam database...	0.78	0.76	0.80	80	54515	25	4	16	5	25
ASE_00046	RNaseP_bact_a links to Rfam database...	0.57	0.51	0.63	53	50319	32	3	28	1	50
ASE_00047	RNaseP_bact_a links to Rfam database...	0.46	0.42	0.50	54	74198	54	3	50	1	76
ASE_00052	RNaseP_bact_a links to Rfam database...	0.44	0.42	0.46	47	61323	59	9	46	4	65
ASE_00053	RNaseP_bact_a links to Rfam database...	0.56	0.55	0.57	73	79274	62	9	45	8	60
ASE_00056	-	0.43	0.43	0.42	31	30803	47	5	37	5	41
ASE_00057	RNaseP_bact_a links to Rfam database...	0.55	0.52	0.58	70	82095	57	13	37	7	64
ASE_00064	RNaseP_bact_a links to Rfam database...	0.50	0.49	0.51	44	45364	46	5	38	3	45
ASE_00066	RNaseP_bact_a links to Rfam database...	0.35	0.32	0.39	41	72286	64	3	60	1	89
ASE_00068	RNaseP_bact_a links to Rfam database...	0.70	0.60	0.82	51	37613	16	2	9	5	34
ASE_00069	RNaseP_bact_a links to Rfam database...	0.53	0.50	0.56	70	82902	60	6	50	4	70
ASE_00074	RNaseP_bact_a links to Rfam database...	0.42	0.40	0.44	48	67786	62	3	59	0	71
ASE_00076	RNaseP_bact_a links to Rfam database...	0.51	0.47	0.56	56	68165	46	2	42	2	62
ASE_00077	RNaseP_bact_a links to Rfam database...	0.42	0.40	0.45	34	45075	47	5	36	6	52
ASE_00078	RNaseP_bact_a links to Rfam database...	0.55	0.52	0.58	43	42997	38	2	29	7	40
ASE_00079	RNaseP_bact_a links to Rfam database...	0.55	0.52	0.59	52	55523	39	5	31	3	48
ASE_00080	RNaseP_bact_a links to Rfam database...	0.32	0.30	0.35	37	71524	71	6	64	1	86
ASE_00081	RNaseP_bact_a links to Rfam database...	0.31	0.29	0.34	28	49688	56	5	49	2	69
ASE_00082	RNaseP_bact_a links to Rfam database...	0.38	0.36	0.40	42	70396	73	2	60	11	74
ASE_00083	RNaseP_bact_a links to Rfam database...	0.25	0.25	0.26	27	62379	75	6	69	0	83
ASE_00084	RNaseP_bact_a links to Rfam database...	0.60	0.57	0.64	56	53540	36	2	30	4	43
ASE_00087	RNaseP_bact_a links to Rfam database...	0.49	0.42	0.57	61	88303	52	2	44	6	83
ASE_00089	-	0.21	0.20	0.22	16	31303	58	2	54	2	63
ASE_00090	RNaseP_bact_a links to Rfam database...	0.52	0.52	0.52	53	55510	52	6	42	4	48
ASE_00092	RNaseP_bact_a links to Rfam database...	0.46	0.44	0.49	50	63444	55	6	46	3	63
ASE_00096	RNaseP_bact_a links to Rfam database...	0.56	0.50	0.63	58	63454	35	2	32	1	57
ASE_00099	RNaseP_bact_a links to Rfam database...	0.58	0.56	0.61	67	64510	44	4	39	1	53
ASE_00100	RNaseP_nuc links to Rfam database...	0.32	0.33	0.31	25	82134	111	7	49	55	51
ASE_00104	RNaseP_bact_a links to Rfam database...	0.53	0.52	0.55	62	64148	52	8	43	1	57
ASE_00105	RNaseP_bact_a links to Rfam database...	0.35	0.32	0.38	36	64165	64	2	58	4	75
ASE_00107	RNaseP_bact_a links to Rfam database...	0.56	0.53	0.59	67	73039	48	1	46	1	60
ASE_00108	RNaseP_nuc links to Rfam database...	0.33	0.38	0.29	24	46888	72	19	40	13	39
ASE_00111	RNaseP_nuc links to Rfam database...	0.34	0.42	0.27	24	49998	74	33	31	10	33
ASE_00112	RNaseP_bact_a links to Rfam database...	0.74	0.70	0.78	81	75362	33	2	21	10	35
ASE_00115	RNaseP_bact_a links to Rfam database...	0.61	0.57	0.64	58	54525	40	4	28	8	43
ASE_00116	RNaseP_arch links to Rfam database...	0.52	0.50	0.54	33	31565	32	3	25	4	33
ASE_00118	RNaseP_bact_a links to Rfam database...	0.39	0.37	0.40	38	60632	60	3	53	4	64
ASE_00119	RNaseP_bact_a links to Rfam database...	0.83	0.81	0.86	87	62734	14	2	12	0	21
ASE_00120	RNaseP_arch links to Rfam database...	0.47	0.46	0.49	43	46883	45	4	41	0	51
ASE_00121	RNaseP_arch links to Rfam database...	0.47	0.46	0.48	42	45063	47	7	38	2	50
ASE_00122	RNaseP_bact_a links to Rfam database...	0.70	0.67	0.73	59	43284	25	1	21	3	29
ASE_00123	RNaseP_bact_a links to Rfam database...	0.43	0.40	0.47	34	38430	45	0	39	6	51
ASE_00125	RNaseP_bact_a links to Rfam database...	0.43	0.38	0.49	33	39272	38	2	33	3	55
ASE_00126	RNaseP_bact_a links to Rfam database...	0.54	0.51	0.57	42	40396	33	3	29	1	40
ASE_00128	RNaseP_bact_a links to Rfam database...	0.43	0.39	0.48	39	53219	47	3	40	4	61
ASE_00129	RNaseP_bact_a links to Rfam database...	0.61	0.59	0.62	66	62729	42	3	37	2	45
ASE_00131	RNaseP_bact_a links to Rfam database...	0.37	0.33	0.42	28	39274	43	3	35	5	57
ASE_00132	RNaseP_bact_a links to Rfam database...	0.65	0.60	0.71	57	50323	24	4	19	1	38
ASE_00134	RNaseP_bact_a links to Rfam database...	0.33	0.32	0.35	30	50317	57	7	49	1	65
ASE_00135	RNaseP_bact_a links to Rfam database...	0.30	0.28	0.31	31	63090	74	3	66	5	78
ASE_00136	RNaseP_bact_a links to Rfam database...	0.67	0.64	0.71	59	48122	32	1	23	8	33
ASE_00137	RNaseP_bact_a links to Rfam database...	0.53	0.52	0.55	51	48423	45	5	37	3	47
ASE_00138	RNaseP_bact_a links to Rfam database...	0.56	0.51	0.63	41	40405	25	4	20	1	40
ASE_00139	RNaseP_bact_a links to Rfam database...	0.55	0.52	0.58	54	54192	42	1	38	3	50
ASE_00140	RNaseP_bact_a links to Rfam database...	0.53	0.49	0.57	61	70769	47	7	39	1	64
ASE_00142	RNaseP_bact_a links to Rfam database...	0.59	0.57	0.61	69	67048	47	5	39	3	53
ASE_00145	RNaseP_arch links to Rfam database...	0.52	0.50	0.54	56	70022	50	2	45	3	55
ASE_00146	RNaseP_bact_a links to Rfam database...	0.53	0.49	0.58	61	70770	48	1	44	3	63
ASE_00151	RNaseP_bact_a links to Rfam database...	0.53	0.49	0.58	48	51920	39	9	26	4	50
ASE_00153	RNaseP_nuc links to Rfam database...	0.51	0.53	0.49	39	57550	72	9	32	31	34
ASE_00154	RNaseP_arch links to Rfam database...	0.62	0.61	0.64	65	65239	37	1	36	0	42
ASE_00155	RNaseP_arch links to Rfam database...	0.59	0.56	0.62	80	93398	54	3	47	4	62
ASE_00163	RNaseP_bact_a links to Rfam database...	0.41	0.40	0.42	37	53213	57	4	47	6	56
ASE_00165	RNaseP_bact_a links to Rfam database...	0.40	0.39	0.42	39	52882	56	6	48	2	62
ASE_00168	RNaseP_nuc links to Rfam database...	0.32	0.38	0.28	24	60640	89	18	44	27	40
ASE_00169	RNaseP_bact_a links to Rfam database...	0.43	0.38	0.48	41	57205	47	2	43	2	66
ASE_00170	RNaseP_bact_a links to Rfam database...	0.72	0.69	0.74	64	48742	24	2	20	2	29
ASE_00171	RNaseP_bact_a links to Rfam database...	0.52	0.50	0.55	47	48431	38	3	35	0	47
ASE_00172	RNaseP_bact_a links to Rfam database...	0.50	0.47	0.54	50	58903	50	5	38	7	56
ASE_00174	RNaseP_bact_a links to Rfam database...	0.44	0.41	0.46	45	60978	53	5	47	1	64
ASE_00175	RNaseP_bact_a links to Rfam database...	0.22	0.21	0.23	23	59931	80	5	72	3	84
ASE_00176	RNaseP_bact_a links to Rfam database...	0.65	0.59	0.71	65	59940	30	4	22	4	45
ASE_00179	RNaseP_bact_a links to Rfam database...	0.54	0.52	0.56	44	44174	36	8	27	1	40
ASE_00180	RNaseP_bact_a links to Rfam database...	0.42	0.41	0.42	41	51263	60	4	52	4	59
ASE_00181	RNaseP_bact_a links to Rfam database...	0.53	0.54	0.53	57	57522	51	4	47	0	49
ASE_00182	RNaseP_bact_a links to Rfam database...	0.45	0.40	0.50	55	84145	57	2	53	2	81
ASE_00183	RNaseP_bact_a links to Rfam database...	0.67	0.63	0.71	71	61325	36	0	29	7	42
ASE_00184	RNaseP_bact_a links to Rfam database...	0.52	0.51	0.54	52	54519	46	8	36	2	50
ASE_00185	RNaseP_bact_a links to Rfam database...	0.29	0.28	0.31	36	73419	81	14	67	0	92
ASE_00186	RNaseP_bact_a links to Rfam database...	0.55	0.51	0.59	67	78889	56	3	44	9	65
ASE_00187	RNaseP_arch links to Rfam database...	0.51	0.48	0.56	55	68536	48	3	41	4	60
ASE_00189	RNaseP_bact_b links to Rfam database...	0.54	0.54	0.55	55	63090	47	7	38	2	47
ASE_00190	RNaseP_bact_b links to Rfam database...	0.55	0.52	0.57	47	45369	40	2	33	5	43
ASE_00192	RNaseP_bact_b links to Rfam database...	0.47	0.45	0.49	60	84543	68	10	53	5	73
ASE_00194	RNaseP_bact_b links to Rfam database...	0.40	0.39	0.42	47	73423	67	15	51	1	72
ASE_00195	-	0.61	0.58	0.64	77	86200	46	8	35	3	56
ASE_00196	RNaseP_arch links to Rfam database...	0.78	0.75	0.81	56	31557	16	2	11	3	19
ASE_00197	RNaseP_bact_a links to Rfam database...	0.42	0.39	0.45	56	89129	76	1	67	8	89
ASE_00198	RNaseP_bact_a links to Rfam database...	0.50	0.46	0.55	47	52564	44	2	37	5	55
ASE_00203	RNaseP_bact_a links to Rfam database...	0.54	0.55	0.53	53	46565	51	4	43	4	43
ASE_00204	RNaseP_bact_b links to Rfam database...	0.53	0.49	0.58	55	67801	46	7	33	6	57
ASE_00205	RNaseP_arch links to Rfam database...	0.52	0.52	0.53	47	45967	45	10	32	3	43
ASE_00209	RNaseP_arch links to Rfam database...	0.62	0.58	0.66	51	42994	26	4	22	0	37
ASE_00210	RNaseP_arch links to Rfam database...	0.57	0.55	0.58	36	27199	28	6	20	2	29
ASE_00213	RNaseP_arch links to Rfam database...	0.71	0.70	0.73	46	27198	18	4	13	1	20
ASE_00214	RNaseP_bact_a links to Rfam database...	0.66	0.63	0.70	65	56187	35	2	26	7	38
ASE_00215	RNaseP_bact_a links to Rfam database...	0.30	0.28	0.32	28	48429	60	7	52	1	71
ASE_00216	RNaseP_bact_a links to Rfam database...	0.65	0.62	0.67	51	39264	26	7	18	1	31
ASE_00217	RNaseP_bact_a links to Rfam database...	0.21	0.19	0.25	17	40401	54	6	46	2	73
ASE_00221	RNaseP_bact_a links to Rfam database...	0.32	0.29	0.35	34	64522	65	3	61	1	83
ASE_00227	RNaseP_bact_a links to Rfam database...	0.32	0.29	0.36	38	78898	67	3	64	0	95
ASE_00228	RNaseP_bact_a links to Rfam database...	0.38	0.37	0.40	32	46890	50	11	38	1	54
ASE_00229	RNaseP_bact_a links to Rfam database...	0.52	0.53	0.52	46	42398	44	6	36	2	41
ASE_00231	RNaseP_bact_a links to Rfam database...	0.63	0.60	0.67	58	47808	33	4	25	4	38
ASE_00232	RNaseP_bact_a links to Rfam database...	0.70	0.70	0.69	59	38418	29	8	18	3	25
ASE_00234	RNaseP_bact_a links to Rfam database...	0.31	0.28	0.34	36	75360	71	9	61	1	93
ASE_00237	RNaseP_nuc links to Rfam database...	0.11	0.13	0.09	7	45676	81	21	49	11	49
ASE_00238	RNaseP_bact_a links to Rfam database...	0.47	0.44	0.51	50	64163	50	2	46	2	64
ASE_00240	RNaseP_bact_a links to Rfam database...	0.26	0.26	0.27	24	46575	68	3	63	2	69
ASE_00241	RNaseP_bact_a links to Rfam database...	0.20	0.18	0.23	16	43886	55	3	51	1	71
ASE_00242	RNaseP_bact_a links to Rfam database...	0.63	0.59	0.67	66	60976	34	3	30	1	46
ASE_00246	RNaseP_nuc links to Rfam database...	0.29	0.28	0.30	19	48141	65	6	39	20	48
ASE_00247	RNaseP_nuc links to Rfam database...	0.60	0.63	0.57	40	54215	63	11	19	33	24
ASE_00248	RNaseP_bact_a links to Rfam database...	0.19	0.18	0.20	20	62382	81	6	73	2	94
ASE_00250	RNaseP_bact_a links to Rfam database...	0.61	0.57	0.64	75	78886	49	2	40	7	56
ASE_00254	RNaseP_bact_a links to Rfam database...	0.38	0.37	0.40	30	36781	48	3	42	3	52
ASE_00255	RNaseP_bact_a links to Rfam database...	0.55	0.53	0.58	69	74572	54	4	46	4	61
ASE_00257	RNaseP_bact_a links to Rfam database...	0.50	0.48	0.53	47	50951	49	3	39	7	50
ASE_00259	RNaseP_bact_a links to Rfam database...	0.44	0.39	0.50	47	73059	50	5	42	3	74
ASE_00263	RNaseP_bact_a links to Rfam database...	0.62	0.59	0.65	71	70390	40	4	35	1	49
ASE_00264	RNaseP_nuc links to Rfam database...	0.43	0.43	0.44	43	49043	59	4	51	4	57
ASE_00267	RNaseP_bact_a links to Rfam database...	0.21	0.19	0.23	17	45075	63	8	50	5	71
ASE_00270	RNaseP_bact_a links to Rfam database...	0.45	0.42	0.49	54	72279	57	5	52	0	74
ASE_00274	RNaseP_bact_a links to Rfam database...	0.49	0.44	0.55	45	55529	38	5	32	1	58
ASE_00277	RNaseP_bact_a links to Rfam database...	0.39	0.37	0.40	34	48121	50	17	33	0	57
ASE_00279	RNaseP_bact_a links to Rfam database...	0.16	0.15	0.17	15	53215	73	2	69	2	86
ASE_00280	RNaseP_bact_a links to Rfam database...	0.40	0.40	0.41	39	51908	60	9	47	4	59
ASE_00281	RNaseP_bact_a links to Rfam database...	0.74	0.66	0.84	58	44482	17	0	11	6	30
ASE_00282	RNaseP_bact_a links to Rfam database...	0.55	0.50	0.60	64	77708	50	7	36	7	63
ASE_00283	RNaseP_bact_a links to Rfam database...	0.54	0.52	0.55	56	61675	47	3	42	2	51
ASE_00284	RNaseP_bact_a links to Rfam database...	0.21	0.20	0.22	22	58211	82	8	70	4	86
ASE_00285	RNaseP_bact_a links to Rfam database...	0.54	0.52	0.57	63	68895	53	2	46	5	59
ASE_00286	RNaseP_bact_a links to Rfam database...	0.38	0.35	0.42	32	46589	45	4	40	1	60
ASE_00287	RNaseP_bact_a links to Rfam database...	0.28	0.27	0.30	28	54852	67	9	57	1	75
ASE_00288	RNaseP_bact_a links to Rfam database...	0.68	0.60	0.78	56	45984	22	0	16	6	37
ASE_00291	-	0.46	0.46	0.47	43	48425	50	9	39	2	51
ASE_00292	RNaseP_bact_a links to Rfam database...	0.42	0.38	0.48	52	81701	58	3	54	1	86
ASE_00295	RNaseP_bact_a links to Rfam database...	0.46	0.41	0.52	54	73816	53	6	44	3	77
ASE_00296	RNaseP_bact_a links to Rfam database...	0.15	0.14	0.17	21	91680	105	6	99	0	124
ASE_00297	RNaseP_bact_a links to Rfam database...	0.34	0.33	0.36	32	52887	59	8	48	3	66
ASE_00298	RNaseP_bact_a links to Rfam database...	0.21	0.21	0.22	24	67418	87	14	72	1	89
ASE_00299	RNaseP_bact_a links to Rfam database...	0.48	0.45	0.51	45	49366	50	7	37	6	55
ASE_00313	RNaseP_nuc links to Rfam database...	0.60	0.57	0.62	51	62399	57	4	27	26	38
ASE_00318	RNaseP_bact_b links to Rfam database...	0.64	0.62	0.66	73	80090	41	10	27	4	45
ASE_00327	RNaseP_nuc links to Rfam database...	0.78	0.75	0.82	67	57209	33	3	12	18	22
ASE_00328	RNaseP_bact_b links to Rfam database...	0.61	0.60	0.63	67	72665	47	2	37	8	45
ASE_00330	RNaseP_nuc links to Rfam database...	0.64	0.67	0.63	60	56184	52	10	26	16	30
ASE_00332	RNaseP_bact_a links to Rfam database...	0.41	0.40	0.43	55	81683	75	3	69	3	83
ASE_00335	RNaseP_bact_b links to Rfam database...	0.62	0.58	0.68	67	75367	37	5	27	5	49
ASE_00337	RNaseP_nuc links to Rfam database...	0.54	0.56	0.52	40	39263	49	5	32	12	31
ASE_00338	RNaseP_nuc links to Rfam database...	0.44	0.43	0.45	42	66336	67	6	46	15	56
ASE_00339	RNaseP_bact_a links to Rfam database...	0.50	0.50	0.51	59	80085	64	7	49	8	60
ASE_00340	RNaseP_bact_a links to Rfam database...	0.34	0.35	0.33	30	45965	64	10	51	3	55
ASE_00342	RNaseP_bact_a links to Rfam database...	0.68	0.63	0.73	73	62381	29	2	25	2	42
ASE_00343	RNaseP_bact_a links to Rfam database...	0.69	0.69	0.69	78	83323	53	7	28	18	35
ASE_00346	RNaseP_arch links to Rfam database...	0.38	0.36	0.41	35	48120	53	4	46	3	62
ASE_00353	RNaseP_bact_a links to Rfam database...	0.61	0.60	0.62	64	57867	40	2	37	1	43
ASE_00359	RNaseP_arch links to Rfam database...	0.11	0.10	0.12	8	42711	62	2	57	3	72
ASE_00360	RNaseP_arch links to Rfam database...	0.40	0.37	0.44	24	29348	31	3	28	0	41
ASE_00361	RNaseP_bact_a links to Rfam database...	0.43	0.40	0.47	51	75358	59	8	49	2	76
ASE_00362	RNaseP_bact_a links to Rfam database...	0.53	0.53	0.53	48	48114	45	4	39	2	43
ASE_00363	RNaseP_bact_a links to Rfam database...	0.49	0.48	0.51	45	51272	50	5	38	7	49
ASE_00364	RNaseP_bact_a links to Rfam database...	0.55	0.51	0.59	54	54193	39	3	35	1	51
ASE_00366	RNaseP_bact_a links to Rfam database...	0.40	0.40	0.40	39	58555	60	10	49	1	59
ASE_00367	RNaseP_bact_a links to Rfam database...	0.44	0.43	0.45	37	42988	54	2	44	8	49
ASE_00369	RNaseP_bact_a links to Rfam database...	0.57	0.55	0.60	59	55846	42	6	34	2	48
ASE_00370	RNaseP_bact_a links to Rfam database...	0.43	0.40	0.47	34	41832	40	6	33	1	50
ASE_00372	RNaseP_bact_a links to Rfam database...	0.56	0.55	0.58	55	51908	43	7	33	3	45
ASE_00374	RNaseP_bact_a links to Rfam database...	0.56	0.56	0.56	49	44762	39	6	33	0	39
ASE_00375	RNaseP_bact_a links to Rfam database...	0.56	0.51	0.61	56	60286	41	2	34	5	54
ASE_00376	RNaseP_bact_a links to Rfam database...	0.55	0.51	0.60	54	56863	37	4	32	1	51
ASE_00377	RNaseP_bact_a links to Rfam database...	0.76	0.71	0.81	76	57536	23	2	16	5	31
ASE_00379	RNaseP_bact_a links to Rfam database...	0.46	0.44	0.49	39	45976	42	7	34	1	50
ASE_00380	RNaseP_bact_a links to Rfam database...	0.44	0.41	0.46	41	54857	51	1	47	3	58
ASE_00382	RNaseP_bact_a links to Rfam database...	0.73	0.68	0.78	57	41832	18	5	11	2	27
ASE_00383	RNaseP_bact_a links to Rfam database...	0.39	0.36	0.43	38	54526	51	3	48	0	67
ASE_00384	RNaseP_bact_a links to Rfam database...	0.32	0.30	0.35	28	48435	62	3	50	9	64
ASE_00385	RNaseP_bact_a links to Rfam database...	0.58	0.56	0.61	45	41831	31	10	19	2	36
ASE_00386	RNaseP_bact_a links to Rfam database...	0.58	0.56	0.60	54	50313	38	7	29	2	42
ASE_00387	RNaseP_bact_a links to Rfam database...	0.49	0.48	0.50	50	55845	53	5	45	3	54
ASE_00388	RNaseP_bact_a links to Rfam database...	0.51	0.49	0.54	44	45671	48	1	37	10	45
ASE_00390	RNaseP_bact_a links to Rfam database...	0.53	0.51	0.55	43	42117	46	1	34	11	42
ASE_00393	RNaseP_bact_a links to Rfam database...	0.37	0.34	0.41	32	47816	53	2	45	6	61
ASE_00394	RNaseP_bact_a links to Rfam database...	0.57	0.55	0.59	51	46884	41	2	34	5	42
ASE_00395	RNaseP_bact_a links to Rfam database...	0.71	0.67	0.76	56	41542	28	1	17	10	28
ASE_00396	RNaseP_bact_a links to Rfam database...	0.47	0.46	0.48	38	41536	46	8	34	4	45
ASE_00397	RNaseP_bact_a links to Rfam database...	0.51	0.47	0.55	49	54526	41	4	36	1	56
ASE_00398	RNaseP_bact_a links to Rfam database...	0.39	0.38	0.40	39	55847	61	6	53	2	65
ASE_00400	RNaseP_bact_a links to Rfam database...	0.54	0.53	0.54	56	57867	48	7	40	1	50
ASE_00401	RNaseP_bact_a links to Rfam database...	0.54	0.52	0.56	65	76912	53	7	44	2	61
ASE_00402	RNaseP_bact_a links to Rfam database...	0.59	0.55	0.64	47	42412	29	7	20	2	38
ASE_00403	RNaseP_bact_a links to Rfam database...	0.24	0.22	0.27	24	55855	70	4	62	4	83
ASE_00404	RNaseP_bact_a links to Rfam database...	0.17	0.16	0.18	14	42992	70	4	61	5	71
ASE_00406	RNaseP_bact_a links to Rfam database...	0.56	0.54	0.57	51	48739	49	2	36	11	43
ASE_00408	-	0.42	0.39	0.46	28	32324	39	3	30	6	43
ASE_00409	-	0.30	0.29	0.32	24	40965	57	6	46	5	59
ASE_00411	RNaseP_bact_a links to Rfam database...	0.27	0.27	0.27	24	49367	65	7	57	1	65
ASE_00412	RNaseP_bact_a links to Rfam database...	0.26	0.25	0.27	26	58215	71	9	61	1	79
ASE_00413	RNaseP_bact_a links to Rfam database...	0.48	0.48	0.49	39	44471	45	1	40	4	42
ASE_00414	RNaseP_bact_a links to Rfam database...	0.24	0.23	0.26	22	46276	65	0	62	3	73
ASE_00415	RNaseP_bact_a links to Rfam database...	0.62	0.59	0.65	61	54852	38	5	28	5	42
ASE_00416	RNaseP_bact_a links to Rfam database...	0.52	0.50	0.54	63	77304	57	5	49	3	64
ASE_00417	RNaseP_arch links to Rfam database...	0.36	0.37	0.36	37	54512	68	9	57	2	63
ASE_00418	RNaseP_arch links to Rfam database...	0.12	0.12	0.12	9	38703	71	10	59	2	66
ASE_00419	RNaseP_bact_a links to Rfam database...	0.75	0.71	0.78	73	54853	22	2	18	2	30
ASE_00422	RNaseP_bact_a links to Rfam database...	0.63	0.61	0.65	57	46883	38	3	28	7	37
ASE_00423	RNaseP_bact_a links to Rfam database...	0.36	0.35	0.38	38	56853	62	6	56	0	71
ASE_00426	RNaseP_bact_a links to Rfam database...	0.50	0.51	0.50	55	60965	55	10	45	0	53
ASE_00428	RNaseP_bact_a links to Rfam database...	0.54	0.51	0.57	64	76523	52	6	43	3	61
ASE_00429	-	0.64	0.59	0.68	39	28146	21	3	15	3	27
ASE_00430	RNaseP_bact_a links to Rfam database...	0.64	0.62	0.67	60	46881	36	1	29	6	37
ASE_00431	RNaseP_bact_a links to Rfam database...	0.58	0.52	0.64	49	46284	34	1	26	7	46
ASE_00434	RNaseP_bact_b links to Rfam database...	0.78	0.71	0.85	78	68173	28	1	13	14	32
ASE_00437	RNaseP_bact_a links to Rfam database...	0.45	0.42	0.48	57	79283	62	1	60	1	78
ASE_00438	RNaseP_bact_a links to Rfam database...	0.42	0.39	0.46	45	65968	53	1	52	0	71
ASE_00441	RNaseP_bact_a links to Rfam database...	0.73	0.65	0.81	73	64171	21	6	11	4	39
ASE_00447	RNaseP_bact_a links to Rfam database...	0.70	0.65	0.75	75	60278	31	4	21	6	41
ASE_00448	RNaseP_bact_a links to Rfam database...	0.37	0.34	0.40	38	64167	62	5	51	6	74
ASE_00451	RNaseP_bact_a links to Rfam database...	0.37	0.35	0.40	44	70766	67	2	64	1	81
CRW_00016	Intron_gpI links to Rfam database...	0.66	0.61	0.72	73	77320	38	5	23	10	47
CRW_00608	-	0.72	0.67	0.77	53	35709	16	1	15	0	26
CRW_00610	Intron_gpI links to Rfam database...	0.50	0.48	0.51	39	36239	38	6	31	1	42
CRW_00611	-	0.76	0.73	0.80	55	31306	21	4	10	7	20
CRW_00613	Intron_gpI links to Rfam database...	0.81	0.73	0.89	57	34916	15	0	7	8	21
CRW_00618	Intron_gpI links to Rfam database...	0.37	0.39	0.34	24	56210	60	15	31	14	37
CRW_00629	-	0.47	0.45	0.48	55	91264	60	11	48	1	67
CRW_00632	-	0.81	0.77	0.84	99	82910	24	7	12	5	29
CRW_00633	Intron_gpI links to Rfam database...	0.74	0.72	0.77	76	63447	26	8	15	3	30
CRW_00634	Intron_gpI links to Rfam database...	0.44	0.41	0.47	39	64537	48	18	26	4	55
CRW_00641	-	0.60	0.59	0.60	45	39828	38	6	24	8	31
CRW_00642	-	0.37	0.42	0.34	27	47198	62	15	38	9	38
CRW_00645	-	0.42	0.42	0.43	28	35446	45	10	27	8	39
CRW_00646	-	0.51	0.53	0.49	34	34910	38	7	29	2	30
CRW_00651	-	0.58	0.60	0.55	73	99996	65	11	48	6	48
CRW_00653	-	0.71	0.69	0.73	93	94703	37	2	32	3	41
CRW_00654	-	0.76	0.71	0.81	88	78101	25	4	17	4	36
CRW_00655	-	0.65	0.62	0.69	77	89141	36	7	28	1	47
CRW_00656	-	0.40	0.38	0.42	49	90407	75	10	59	6	80
CRW_00658	-	0.41	0.40	0.41	41	74592	58	12	46	0	61
CRW_00659	-	0.45	0.48	0.43	29	32317	48	8	31	9	32
CRW_00660	-	0.53	0.53	0.52	32	22094	30	5	24	1	28
CRW_00661	-	0.09	0.10	0.08	5	24247	61	20	38	3	46
CRW_00662	-	0.13	0.14	0.12	9	28606	71	8	57	6	56
CRW_00663	-	0.19	0.20	0.18	12	26041	59	7	46	6	49
CRW_00664	-	0.37	0.38	0.36	30	53544	61	12	42	7	48
CRW_00665	-	0.00	0.00	0.00	0	23592	62	16	45	1	48
CRW_00666	-	0.38	0.37	0.39	47	96019	85	8	67	10	79
CRW_00670	Intron_gpI links to Rfam database...	0.54	0.53	0.55	63	70011	53	6	45	2	57
CRW_00671	Intron_gpI links to Rfam database...	0.66	0.59	0.74	69	62742	28	5	19	4	48
CRW_00672	Intron_gpI links to Rfam database...	0.52	0.50	0.56	55	72291	48	9	35	4	56
CRW_00673	-	0.63	0.67	0.59	70	100010	50	28	20	2	35
CRW_00674	Intron_gpI links to Rfam database...	0.43	0.42	0.44	52	83319	69	14	51	4	72
CRW_00676	Intron_gpI links to Rfam database...	0.30	0.30	0.31	35	93414	85	9	70	6	80
CRW_00677	-	0.57	0.60	0.55	63	71895	55	14	38	3	42
CRW_00679	-	0.38	0.39	0.38	42	76525	71	18	51	2	65
CRW_00687	-	0.54	0.56	0.51	37	28608	37	8	27	2	29
CRW_00688	-	0.61	0.60	0.63	34	21891	22	0	20	2	23
CRW_00689	-	0.43	0.43	0.44	33	33595	47	7	35	5	44
CRW_00690	-	0.66	0.67	0.65	46	33340	29	9	16	4	23
CRW_00691	-	0.71	0.72	0.70	48	27192	25	4	17	4	19
CRW_00692	Intron_gpI links to Rfam database...	0.26	0.27	0.25	24	68538	77	23	50	4	66
CRW_00693	-	0.69	0.70	0.67	86	89124	51	9	34	8	36
CRW_00694	-	0.60	0.61	0.60	74	85782	52	9	40	3	48
CRW_00699	-	0.27	0.25	0.28	32	91692	82	12	70	0	94
CRW_00703	-	0.25	0.27	0.23	18	40390	66	14	48	4	48
CRW_00715	-	0.53	0.53	0.54	55	69276	49	6	41	2	49
CRW_00721	-	0.37	0.38	0.36	26	58581	61	14	32	15	42
PDB_00005	Tymo_tRNA-like links to Rfam database...	0.88	0.79	1.00	11	935	0	0	0	0	3
PDB_00018	-	0.19	0.20	0.21	4	1016	15	2	13	0	16
PDB_00020	-	0.75	0.65	0.87	13	765	2	0	2	0	7
PDB_00041	-	1.00	1.00	1.00	12	618	0	0	0	0	0
PDB_00053	-	1.00	1.00	1.00	11	424	0	0	0	0	0
PDB_00056	-	0.93	0.88	1.00	14	616	0	0	0	0	2
PDB_00078	-	0.68	0.63	0.73	73	49670	27	9	18	0	42
PDB_00123	-	0.33	0.33	0.33	12	4150	24	0	24	0	24
PDB_00124	-	0.86	0.90	0.82	9	485	2	2	0	0	1
PDB_00128	-	0.80	0.71	0.91	10	485	1	0	1	0	4
PDB_00134	-	0.79	0.63	1.00	5	373	0	0	0	0	3
PDB_00138	-	0.94	1.00	0.89	8	369	1	1	0	0	0
PDB_00209	-	0.96	1.00	0.92	11	549	1	1	0	0	0
PDB_00243	-	1.00	1.00	1.00	12	618	0	0	0	0	0
PDB_00278	-	0.61	0.57	0.65	41	24913	22	4	18	0	31
PDB_00352	-	0.86	0.79	0.94	15	1209	1	0	1	0	4
PDB_00370	-	0.00	0.00	0.00	0	15181	44	13	31	0	25
PDB_00423	-	0.55	0.50	0.61	37	26735	24	4	20	0	37
PDB_00447	-	0.11	0.11	0.12	5	7097	38	7	31	0	39
PDB_00571	tRNA links to Rfam database...	0.87	0.80	0.95	20	3300	1	1	0	0	5
PDB_00701	-	0.11	0.11	0.12	12	45351	88	9	79	0	97
PDB_00713	-	0.43	0.43	0.45	9	1996	11	0	11	0	12
PDB_00716	HDV_ribozyme links to Rfam database...	0.68	0.70	0.67	16	2677	9	0	8	1	7
PDB_00747	-	0.57	0.48	0.68	38	24475	19	1	17	1	42
PDB_00804	-	0.00	0.00	0.00	0	15344	56	10	46	0	50
PDB_00827	Intron_gpI links to Rfam database...	0.68	0.59	0.79	48	26967	15	0	13	2	33
PDB_00828	Purine links to Rfam database...	0.88	0.78	1.00	21	2464	0	0	0	0	6
PDB_00829	Purine links to Rfam database...	0.86	0.75	1.00	18	2260	0	0	0	0	6
PDB_00842	-	0.79	0.63	1.00	5	373	0	0	0	0	3
PDB_00851	-	0.49	0.44	0.56	18	4721	14	0	14	0	23
PDB_00857	-	1.00	1.00	1.00	15	1066	0	0	0	0	0
PDB_00874	-	-0.02	0.00	0.00	0	928	18	0	18	0	20
PDB_00886	-	-0.01	0.00	0.00	0	4147	39	0	39	0	40
PDB_00917	-	0.60	0.57	0.64	54	35161	34	4	26	4	41
PDB_00918	-	0.93	1.00	0.88	7	317	1	1	0	0	0
PDB_00919	RNaseP_bact_a links to Rfam database...	0.53	0.49	0.59	50	44168	38	3	32	3	53
PDB_01009	tRNA links to Rfam database...	0.90	0.90	0.90	19	2464	5	0	2	3	2
PDB_01020	Purine links to Rfam database...	0.86	0.74	1.00	17	2261	1	0	0	1	6
PDB_01040	-	0.30	0.30	0.32	6	1109	13	0	13	0	14
PDB_01059	-	0.88	1.00	0.78	7	222	2	2	0	0	0
PDB_01070	-	0.78	0.70	0.86	38	12676	6	0	6	0	16
PDB_01073	SAM links to Rfam database...	0.52	0.47	0.57	16	4343	13	2	10	1	18
PDB_01092	glmS links to Rfam database...	0.81	0.75	0.89	39	10109	6	1	4	1	13
PDB_01129	-	0.40	0.39	0.41	28	35443	44	12	28	4	43
PDB_01157	-	0.08	0.08	0.09	8	49999	81	10	69	2	90
PDB_01194	-	0.89	0.87	0.93	13	482	1	1	0	0	2
PDB_01201	-	0.88	0.77	1.00	17	1111	0	0	0	0	5
PDB_01203	-	0.74	0.68	0.81	13	1160	3	2	1	0	6
PDB_01250	-	0.17	0.15	0.19	6	12059	25	5	20	0	35
PDB_01260	-	0.92	0.92	0.92	23	1805	2	1	1	0	2
PDB_01281	-	-0.04	0.00	0.00	0	365	13	0	13	0	14
PDB_01299	-	0.71	0.67	0.77	10	890	3	1	2	0	5
PDB_01309	-	0.12	0.15	0.10	6	9122	56	12	40	4	33
RFA_00598	Telomerase-vert links to Rfam database...	0.35	0.36	0.35	36	84563	76	12	55	9	65
RFA_00632	HDV_ribozyme links to Rfam database...	0.88	0.89	0.86	25	4066	4	3	1	0	3
RFA_00636	HDV_ribozyme links to Rfam database...	0.73	0.71	0.74	20	3978	7	5	2	0	8
RFA_00767	Corona_pk3 links to Rfam database...	1.00	1.00	1.00	18	1873	0	0	0	0	0
RFA_00768	Corona_pk3 links to Rfam database...	1.00	1.00	1.00	18	1873	0	0	0	0	0
RFA_00769	Corona_pk3 links to Rfam database...	0.85	0.94	0.77	17	1931	5	4	1	0	1
RFA_00770	Corona_pk3 links to Rfam database...	0.88	0.78	1.00	14	2002	4	0	0	4	4
RFA_00773	Corona_pk3 links to Rfam database...	0.97	1.00	0.95	18	1934	5	1	0	4	0
RFA_00779	Corona_pk3 links to Rfam database...	0.97	0.94	1.00	17	1936	0	0	0	0	1
RFA_00808	RydC links to Rfam database...	1.00	1.00	1.00	16	2000	0	0	0	0	0
RFA_00809	RydC links to Rfam database...	0.79	0.81	0.76	13	2128	4	0	4	0	3
TMR_00007	tmRNA links to Rfam database...	0.34	0.32	0.36	35	61679	67	14	48	5	73
TMR_00008	tmRNA links to Rfam database...	0.36	0.36	0.37	38	65964	71	12	52	7	68
TMR_00010	tmRNA links to Rfam database...	0.35	0.35	0.35	34	57873	63	7	56	0	62
TMR_00012	tmRNA links to Rfam database...	0.31	0.31	0.32	25	64541	72	12	42	18	56
TMR_00014	tmRNA links to Rfam database...	0.66	0.64	0.69	70	68534	41	12	19	10	40
TMR_00017	tmRNA links to Rfam database...	0.25	0.24	0.26	24	67070	73	5	62	6	78
TMR_00018	tmRNA links to Rfam database...	0.56	0.59	0.54	54	64520	48	15	31	2	38
TMR_00028	tmRNA links to Rfam database...	0.52	0.51	0.53	49	62743	45	5	38	2	48
TMR_00030	tmRNA links to Rfam database...	0.23	0.23	0.23	25	75746	88	12	72	4	86
TMR_00034	tmRNA links to Rfam database...	0.60	0.60	0.61	66	59923	47	6	36	5	44
TMR_00035	tmRNA links to Rfam database...	0.57	0.60	0.55	59	67788	59	11	38	10	39
TMR_00038	tmRNA links to Rfam database...	0.28	0.28	0.29	31	71145	81	15	62	4	79
TMR_00042	tmRNA links to Rfam database...	0.16	0.15	0.16	15	62744	81	8	68	5	83
TMR_00046	tmRNA links to Rfam database...	0.28	0.29	0.26	28	62729	78	15	63	0	68
TMR_00047	tmRNA links to Rfam database...	0.29	0.33	0.25	19	48439	70	23	35	12	38
TMR_00048	tmRNA links to Rfam database...	0.31	0.33	0.30	31	64876	75	16	57	2	64
TMR_00049	tmRNA links to Rfam database...	0.52	0.52	0.52	45	63103	52	7	35	10	42
TMR_00051	tmRNA links to Rfam database...	0.56	0.54	0.59	51	65616	49	3	33	13	43
TMR_00055	tmRNA links to Rfam database...	0.27	0.26	0.29	30	78898	78	13	62	3	84
TMR_00057	tmRNA links to Rfam database...	0.34	0.38	0.30	30	73820	83	23	47	13	49
TMR_00061	tmRNA links to Rfam database...	0.19	0.19	0.20	19	59589	84	9	68	7	80
TMR_00062	tmRNA links to Rfam database...	0.72	0.69	0.74	72	78509	40	8	17	15	32
TMR_00064	tmRNA links to Rfam database...	0.45	0.45	0.46	46	76927	55	18	37	0	57
TMR_00065	tmRNA links to Rfam database...	0.50	0.48	0.53	51	76540	46	14	31	1	55
TMR_00067	tmRNA links to Rfam database...	0.38	0.39	0.38	44	82100	73	11	60	2	70
TMR_00073	tmRNA links to Rfam database...	0.40	0.38	0.42	45	65597	62	6	55	1	72
TMR_00076	tmRNA links to Rfam database...	0.37	0.38	0.37	38	70773	75	8	57	10	62
TMR_00080	tmRNA links to Rfam database...	0.45	0.46	0.44	44	70400	57	19	37	1	52
TMR_00081	tmRNA links to Rfam database...	0.55	0.50	0.62	53	67075	33	9	24	0	53
TMR_00082	tmRNA links to Rfam database...	0.50	0.49	0.52	47	67805	48	11	33	4	49
TMR_00083	tmRNA links to Rfam database...	0.37	0.37	0.37	39	68159	71	11	56	4	66
TMR_00092	tmRNA links to Rfam database...	0.46	0.50	0.42	50	67409	72	15	54	3	51
TMR_00093	tmRNA links to Rfam database...	0.23	0.24	0.23	24	64157	80	14	66	0	78
TMR_00096	tmRNA links to Rfam database...	0.26	0.26	0.27	26	64883	71	11	60	0	74
TMR_00101	tmRNA links to Rfam database...	0.48	0.47	0.50	50	64161	55	8	42	5	57
TMR_00102	tmRNA links to Rfam database...	0.46	0.47	0.45	47	64156	61	17	41	3	54
TMR_00103	tmRNA links to Rfam database...	0.67	0.67	0.67	72	64153	37	7	29	1	36
TMR_00104	-	0.17	0.19	0.15	13	66709	77	22	51	4	57
TMR_00109	tmRNA links to Rfam database...	0.40	0.37	0.45	45	88309	63	9	47	7	77
TMR_00111	tmRNA links to Rfam database...	0.49	0.47	0.52	57	90415	61	7	46	8	65
TMR_00116	tmRNA links to Rfam database...	0.62	0.60	0.65	62	64885	45	3	30	12	42
TMR_00117	tmRNA links to Rfam database...	0.64	0.62	0.66	73	80090	46	4	33	9	45
TMR_00118	tmRNA links to Rfam database...	0.34	0.33	0.35	39	81295	73	5	67	1	81
TMR_00119	tmRNA links to Rfam database...	0.31	0.31	0.32	32	71910	73	9	59	5	72
TMR_00123	tmRNA links to Rfam database...	0.26	0.25	0.27	25	66338	71	4	63	4	76
TMR_00124	tmRNA links to Rfam database...	0.49	0.49	0.49	48	70403	61	12	37	12	50
TMR_00125	tmRNA links to Rfam database...	0.63	0.62	0.65	61	64167	37	6	27	4	38
TMR_00127	tmRNA links to Rfam database...	0.65	0.64	0.67	62	62742	31	13	18	0	35
TMR_00128	tmRNA links to Rfam database...	0.44	0.44	0.44	42	60979	56	11	43	2	54
TMR_00131	tmRNA links to Rfam database...	0.46	0.44	0.47	44	64886	57	11	39	7	55
TMR_00135	tmRNA links to Rfam database...	0.75	0.70	0.80	69	62749	23	6	11	6	30
TMR_00136	tmRNA links to Rfam database...	0.28	0.30	0.27	30	74579	88	13	69	6	71
TMR_00137	tmRNA links to Rfam database...	0.39	0.36	0.43	32	61000	48	8	35	5	57
TMR_00139	tmRNA links to Rfam database...	0.65	0.68	0.62	62	62028	47	20	18	9	29
TMR_00140	tmRNA links to Rfam database...	0.62	0.59	0.66	59	73831	37	7	23	7	41
TMR_00142	tmRNA links to Rfam database...	0.54	0.53	0.55	54	70778	56	10	34	12	48
TMR_00143	tmRNA links to Rfam database...	0.49	0.48	0.52	49	64525	56	9	37	10	54
TMR_00144	tmRNA links to Rfam database...	0.37	0.36	0.39	37	74209	64	11	48	5	66
TMR_00146	tmRNA links to Rfam database...	0.84	0.71	1.00	30	32101	23	0	0	23	12
TMR_00150	tmRNA links to Rfam database...	0.46	0.50	0.43	21	43022	50	10	18	22	21
TMR_00152	tmRNA links to Rfam database...	0.31	0.30	0.32	35	81296	83	8	67	8	80
TMR_00155	tmRNA links to Rfam database...	0.56	0.53	0.59	55	61683	45	4	34	7	49
TMR_00156	tmRNA links to Rfam database...	0.24	0.24	0.24	23	60282	77	19	54	4	74
TMR_00158	tmRNA links to Rfam database...	0.51	0.49	0.52	49	60632	49	4	41	4	50
TMR_00159	tmRNA links to Rfam database...	0.19	0.21	0.19	19	62026	83	19	64	0	73
TMR_00160	tmRNA links to Rfam database...	0.37	0.37	0.37	35	64525	70	15	45	10	60
TMR_00164	tmRNA links to Rfam database...	0.54	0.52	0.56	55	66697	51	4	39	8	51
TMR_00165	tmRNA links to Rfam database...	0.49	0.48	0.51	47	61683	55	11	35	9	50
TMR_00166	tmRNA links to Rfam database...	0.27	0.27	0.28	27	61679	78	7	63	8	74
TMR_00168	tmRNA links to Rfam database...	0.79	0.79	0.80	90	60962	24	6	17	1	24
TMR_00173	tmRNA links to Rfam database...	0.34	0.40	0.29	17	42137	64	19	22	23	25
TMR_00179	tmRNA links to Rfam database...	0.42	0.42	0.41	41	67062	65	10	48	7	57
TMR_00180	tmRNA links to Rfam database...	0.38	0.37	0.39	37	67067	63	19	38	6	62
TMR_00182	tmRNA links to Rfam database...	0.10	0.10	0.11	10	66339	87	10	71	6	92
TMR_00183	tmRNA links to Rfam database...	0.22	0.22	0.22	23	63087	85	12	68	5	80
TMR_00184	tmRNA links to Rfam database...	0.40	0.41	0.40	42	63084	68	6	58	4	60
TMR_00193	tmRNA links to Rfam database...	0.19	0.20	0.18	16	59251	80	20	53	7	64
TMR_00194	tmRNA links to Rfam database...	0.41	0.40	0.42	37	62746	55	11	41	3	56
TMR_00196	tmRNA links to Rfam database...	0.42	0.38	0.46	37	60995	51	6	37	8	60
TMR_00199	tmRNA links to Rfam database...	0.27	0.25	0.28	23	62754	62	18	40	4	69
TMR_00200	-	0.40	0.40	0.41	30	41542	54	8	36	10	45
TMR_00204	tmRNA links to Rfam database...	0.51	0.47	0.55	46	60294	47	7	31	9	51
TMR_00207	tmRNA links to Rfam database...	0.25	0.24	0.25	25	72291	81	7	67	7	78
TMR_00223	tmRNA links to Rfam database...	0.45	0.43	0.48	41	64175	49	12	33	4	54
TMR_00224	tmRNA links to Rfam database...	0.40	0.39	0.41	39	64884	62	10	47	5	62
TMR_00226	tmRNA links to Rfam database...	0.48	0.48	0.49	50	69648	61	10	43	8	55
TMR_00227	tmRNA links to Rfam database...	0.44	0.46	0.43	46	70018	65	12	49	4	55
TMR_00228	tmRNA links to Rfam database...	0.31	0.32	0.30	35	88294	89	22	59	8	73
TMR_00234	tmRNA links to Rfam database...	0.36	0.32	0.41	33	58915	53	9	39	5	69
TMR_00238	tmRNA links to Rfam database...	0.33	0.36	0.31	36	84549	87	16	65	6	65
TMR_00239	tmRNA links to Rfam database...	0.60	0.63	0.58	60	61672	47	11	33	3	36
TMR_00240	tmRNA links to Rfam database...	0.53	0.54	0.52	46	63101	49	13	30	6	39
TMR_00246	-	0.52	0.50	0.55	17	78179	97	3	11	83	17
TMR_00248	tmRNA links to Rfam database...	0.16	0.18	0.13	7	54232	77	20	26	31	31
TMR_00257	tmRNA links to Rfam database...	0.24	0.22	0.25	22	67073	67	13	53	1	76
TMR_00259	tmRNA links to Rfam database...	0.60	0.57	0.63	59	67802	38	11	24	3	44
TMR_00261	tmRNA links to Rfam database...	0.41	0.41	0.42	41	66698	56	12	44	0	60
TMR_00262	tmRNA links to Rfam database...	0.44	0.46	0.42	48	74191	66	19	47	0	56
TMR_00271	tmRNA links to Rfam database...	0.44	0.45	0.44	41	64168	61	6	46	9	50
TMR_00274	tmRNA links to Rfam database...	0.26	0.27	0.25	28	66683	91	13	71	7	77
TMR_00278	tmRNA links to Rfam database...	0.44	0.45	0.42	46	67787	72	5	58	9	56
TMR_00279	tmRNA links to Rfam database...	0.46	0.48	0.45	45	68905	63	10	46	7	49
TMR_00280	tmRNA links to Rfam database...	0.48	0.49	0.48	49	65963	67	6	48	13	52
TMR_00283	tmRNA links to Rfam database...	0.51	0.53	0.49	51	65237	56	14	39	3	45
TMR_00289	tmRNA links to Rfam database...	0.41	0.41	0.42	40	67065	67	11	45	11	58
TMR_00290	tmRNA links to Rfam database...	0.38	0.36	0.41	33	64181	48	11	36	1	59
TMR_00296	tmRNA links to Rfam database...	0.22	0.23	0.21	23	68898	88	19	66	3	75
TMR_00298	tmRNA links to Rfam database...	0.40	0.42	0.39	42	68157	72	11	55	6	59
TMR_00300	tmRNA links to Rfam database...	0.64	0.60	0.68	67	70401	42	3	29	10	45
TMR_00301	tmRNA links to Rfam database...	0.28	0.26	0.29	25	82130	66	12	48	6	71
TMR_00302	tmRNA links to Rfam database...	0.52	0.55	0.48	52	77313	71	20	36	15	42
TMR_00305	tmRNA links to Rfam database...	0.49	0.47	0.52	48	60983	50	9	35	6	54
TMR_00306	tmRNA links to Rfam database...	0.29	0.29	0.29	31	64155	81	7	68	6	75
TMR_00310	tmRNA links to Rfam database...	0.61	0.59	0.63	58	63811	42	6	28	8	40
TMR_00317	tmRNA links to Rfam database...	0.60	0.61	0.59	62	68160	47	13	30	4	40
TMR_00331	tmRNA links to Rfam database...	0.30	0.33	0.28	27	66697	85	11	60	14	55
TMR_00332	tmRNA links to Rfam database...	0.51	0.48	0.55	48	67073	45	7	33	5	51
TMR_00334	tmRNA links to Rfam database...	0.56	0.54	0.58	55	66700	48	8	32	8	46
TMR_00337	tmRNA links to Rfam database...	0.60	0.58	0.62	69	82917	43	12	30	1	50
TMR_00340	tmRNA links to Rfam database...	0.47	0.46	0.49	37	64185	59	3	36	20	44
TMR_00341	tmRNA links to Rfam database...	0.29	0.30	0.28	28	63091	73	17	54	2	64
TMR_00343	tmRNA links to Rfam database...	0.39	0.39	0.39	41	64876	67	10	53	4	64
TMR_00345	tmRNA links to Rfam database...	0.54	0.54	0.53	56	63798	49	12	37	0	48
TMR_00346	tmRNA links to Rfam database...	0.57	0.54	0.60	51	64176	38	9	25	4	43
TMR_00348	tmRNA links to Rfam database...	0.54	0.49	0.60	49	77339	50	7	26	17	50
TMR_00352	tmRNA links to Rfam database...	0.14	0.16	0.12	12	95168	106	29	57	20	63
TMR_00353	tmRNA links to Rfam database...	0.53	0.54	0.51	57	84143	64	23	32	9	48
TMR_00357	tmRNA links to Rfam database...	0.57	0.62	0.53	57	82921	57	23	27	7	35
TMR_00358	tmRNA links to Rfam database...	0.46	0.47	0.44	47	74972	65	20	39	6	52
TMR_00366	tmRNA links to Rfam database...	0.50	0.51	0.50	51	67794	55	15	36	4	49
TMR_00372	tmRNA links to Rfam database...	0.49	0.48	0.50	46	70408	56	10	36	10	50
TMR_00374	tmRNA links to Rfam database...	0.21	0.23	0.20	21	81706	88	18	65	5	71
TMR_00375	tmRNA links to Rfam database...	0.48	0.51	0.45	50	73425	71	17	44	10	48
TMR_00376	tmRNA links to Rfam database...	0.34	0.37	0.32	35	74582	81	20	54	7	60
TMR_00378	tmRNA links to Rfam database...	0.43	0.44	0.42	43	67793	60	13	47	0	54
TMR_00383	tmRNA links to Rfam database...	0.29	0.31	0.28	31	66683	83	12	69	2	69
TMR_00384	tmRNA links to Rfam database...	0.20	0.19	0.20	21	65599	91	7	76	8	87
TMR_00393	tmRNA links to Rfam database...	0.52	0.58	0.46	31	53234	61	17	19	25	22
TMR_00395	tmRNA links to Rfam database...	0.44	0.42	0.47	46	64522	56	8	44	4	63
TMR_00398	tmRNA links to Rfam database...	0.40	0.39	0.42	41	65244	60	6	50	4	65
TMR_00399	tmRNA links to Rfam database...	0.26	0.27	0.25	25	64879	79	17	59	3	69
TMR_00404	tmRNA links to Rfam database...	0.42	0.46	0.39	42	67419	67	21	46	0	50
TMR_00408	tmRNA links to Rfam database...	0.38	0.40	0.36	35	65969	72	16	46	10	53
TMR_00409	tmRNA links to Rfam database...	0.57	0.59	0.55	27	68586	66	5	17	44	19
TMR_00411	tmRNA links to Rfam database...	0.40	0.39	0.41	34	60993	54	13	35	6	53
TMR_00415	tmRNA links to Rfam database...	0.31	0.32	0.31	32	67057	75	13	59	3	69
TMR_00419	tmRNA links to Rfam database...	0.63	0.63	0.63	70	81698	60	19	23	18	41
TMR_00422	tmRNA links to Rfam database...	0.59	0.58	0.60	53	67808	48	6	29	13	39
TMR_00423	tmRNA links to Rfam database...	0.12	0.14	0.11	10	63816	87	19	58	10	63
TMR_00427	tmRNA links to Rfam database...	0.33	0.31	0.36	30	67445	60	9	44	7	67
TMR_00429	tmRNA links to Rfam database...	0.58	0.60	0.57	65	74577	51	13	36	2	44
TMR_00430	tmRNA links to Rfam database...	0.45	0.44	0.47	48	82519	56	17	37	2	61
TMR_00431	tmRNA links to Rfam database...	0.63	0.62	0.64	34	51950	52	7	12	33	21
TMR_00432	tmRNA links to Rfam database...	0.31	0.33	0.30	34	79687	80	9	70	1	70
TMR_00433	tmRNA links to Rfam database...	0.17	0.17	0.17	18	80092	90	13	77	0	88
TMR_00439	tmRNA links to Rfam database...	0.41	0.45	0.38	45	68518	82	19	53	10	56
TMR_00441	tmRNA links to Rfam database...	0.14	0.16	0.12	13	62019	102	19	77	6	70
TMR_00443	tmRNA links to Rfam database...	0.52	0.48	0.56	50	67071	42	9	31	2	54
TMR_00448	tmRNA links to Rfam database...	0.59	0.57	0.61	52	62043	40	3	30	7	40
TMR_00451	tmRNA links to Rfam database...	0.21	0.22	0.20	20	63448	82	16	62	4	69
TMR_00457	tmRNA links to Rfam database...	0.43	0.44	0.42	45	78500	63	11	50	2	57
TMR_00458	tmRNA links to Rfam database...	0.37	0.34	0.40	32	63465	53	15	34	4	61
TMR_00460	tmRNA links to Rfam database...	0.43	0.42	0.44	44	79302	62	8	47	7	62
TMR_00465	tmRNA links to Rfam database...	0.32	0.32	0.32	30	64166	69	19	46	4	64
TMR_00469	tmRNA links to Rfam database...	0.35	0.34	0.35	34	64524	67	5	57	5	66
TMR_00472	tmRNA links to Rfam database...	0.23	0.24	0.23	23	64519	86	16	62	8	74
TMR_00478	tmRNA links to Rfam database...	0.19	0.19	0.18	19	71905	91	15	71	5	80
TMR_00498	tmRNA links to Rfam database...	0.44	0.44	0.44	44	68905	68	14	43	11	55
TMR_00499	tmRNA links to Rfam database...	0.35	0.37	0.33	37	64509	79	6	68	5	62
TMR_00501	tmRNA links to Rfam database...	0.44	0.46	0.42	42	62381	60	14	44	2	50
TMR_00502	tmRNA links to Rfam database...	0.36	0.37	0.36	34	75372	75	8	52	15	59
TMR_00503	tmRNA links to Rfam database...	0.17	0.16	0.18	18	67795	83	5	78	0	93
TMR_00519	tmRNA links to Rfam database...	0.25	0.25	0.24	24	63091	77	12	63	2	71
TMR_00520	tmRNA links to Rfam database...	0.35	0.33	0.37	33	63100	66	11	46	9	66
TMR_00522	tmRNA links to Rfam database...	0.37	0.36	0.39	35	63100	62	5	50	7	62
TMR_00528	tmRNA links to Rfam database...	0.46	0.44	0.48	43	63100	58	12	35	11	54
TMR_00540	tmRNA links to Rfam database...	0.10	0.11	0.11	11	73432	101	12	81	8	93
TMR_00541	tmRNA links to Rfam database...	0.31	0.30	0.32	32	61675	76	8	61	7	73
TMR_00544	tmRNA links to Rfam database...	0.36	0.34	0.37	37	89577	73	10	52	11	71
TMR_00547	tmRNA links to Rfam database...	0.45	0.44	0.46	44	65246	51	7	44	0	56
TMR_00553	tmRNA links to Rfam database...	0.49	0.49	0.49	40	48123	47	15	27	5	41
TMR_00559	tmRNA links to Rfam database...	0.35	0.33	0.37	33	62391	63	7	50	6	68
TMR_00560	tmRNA links to Rfam database...	0.33	0.31	0.37	30	60993	57	5	47	5	68
TMR_00562	tmRNA links to Rfam database...	0.25	0.26	0.24	27	72660	86	14	70	2	75
TMR_00563	tmRNA links to Rfam database...	0.59	0.59	0.59	61	75363	48	13	29	6	42
TMR_00566	tmRNA links to Rfam database...	0.38	0.37	0.39	37	60631	58	9	49	0	63
TMR_00568	tmRNA links to Rfam database...	0.35	0.33	0.37	33	60637	62	7	49	6	66
TMR_00570	tmRNA links to Rfam database...	0.62	0.58	0.67	56	60295	35	3	24	8	41
TMR_00571	tmRNA links to Rfam database...	0.43	0.41	0.45	41	60635	57	9	41	7	58
TMR_00576	tmRNA links to Rfam database...	0.59	0.58	0.60	59	60280	46	12	27	7	43
TMR_00579	tmRNA links to Rfam database...	0.17	0.19	0.16	17	80496	100	21	67	12	73
TMR_00580	tmRNA links to Rfam database...	0.46	0.43	0.49	43	60638	48	5	40	3	57
TMR_00581	tmRNA links to Rfam database...	0.51	0.50	0.53	49	62388	49	11	33	5	49
TMR_00584	tmRNA links to Rfam database...	0.58	0.55	0.61	53	60988	42	5	29	8	44
TMR_00586	tmRNA links to Rfam database...	0.42	0.39	0.44	38	60989	53	9	39	5	59
TMR_00587	tmRNA links to Rfam database...	0.83	0.83	0.83	83	61325	23	4	13	6	17
TMR_00588	tmRNA links to Rfam database...	0.42	0.43	0.41	43	77316	70	13	49	8	58
TMR_00594	tmRNA links to Rfam database...	0.31	0.31	0.31	32	79297	74	12	60	2	72
TMR_00596	tmRNA links to Rfam database...	0.35	0.34	0.36	32	78120	71	13	45	13	63
TMR_00599	tmRNA links to Rfam database...	0.30	0.35	0.25	25	63091	75	29	45	1	47
TMR_00600	tmRNA links to Rfam database...	0.15	0.15	0.15	17	79688	95	10	85	0	98
TMR_00601	tmRNA links to Rfam database...	0.79	0.71	0.88	30	58962	47	1	3	43	12
TMR_00603	tmRNA links to Rfam database...	0.63	0.72	0.54	31	60321	70	10	16	44	12
TMR_00604	tmRNA links to Rfam database...	0.69	0.70	0.68	78	62720	38	6	31	1	34
TMR_00605	tmRNA links to Rfam database...	0.53	0.53	0.53	57	74197	55	22	29	4	51
TMR_00606	tmRNA links to Rfam database...	0.53	0.52	0.54	56	68903	56	6	41	9	51
TMR_00609	tmRNA links to Rfam database...	0.73	0.73	0.73	83	63433	36	6	24	6	30
TMR_00610	tmRNA links to Rfam database...	0.67	0.65	0.68	68	62028	40	7	25	8	36
TMR_00611	tmRNA links to Rfam database...	0.76	0.78	0.74	80	61317	33	8	20	5	22
TMR_00612	tmRNA links to Rfam database...	0.50	0.53	0.47	55	60609	62	9	53	0	49
TMR_00614	tmRNA links to Rfam database...	0.60	0.58	0.63	60	60980	42	2	33	7	44
TMR_00615	tmRNA links to Rfam database...	0.49	0.47	0.51	45	63815	45	14	29	2	51
TMR_00616	tmRNA links to Rfam database...	0.26	0.26	0.26	26	67061	78	9	65	4	73
TMR_00617	tmRNA links to Rfam database...	0.39	0.43	0.36	25	34646	47	16	29	2	33
TMR_00623	tmRNA links to Rfam database...	0.50	0.47	0.53	51	61328	48	5	41	2	57
TMR_00624	tmRNA links to Rfam database...	0.73	0.72	0.73	78	62374	31	13	16	2	30
TMR_00625	tmRNA links to Rfam database...	0.32	0.34	0.31	36	78887	84	18	62	4	70
TMR_00626	tmRNA links to Rfam database...	0.43	0.43	0.43	47	67787	68	4	58	6	62
TMR_00680	tmRNA links to Rfam database...	0.25	0.26	0.25	26	67790	80	19	61	0	73
TMR_00681	tmRNA links to Rfam database...	0.48	0.47	0.49	46	65973	51	8	39	4	51
TMR_00683	tmRNA links to Rfam database...	0.26	0.27	0.26	27	82923	92	17	61	14	73
TMR_00686	tmRNA links to Rfam database...	0.33	0.34	0.32	37	71138	82	17	61	4	71
TMR_00687	tmRNA links to Rfam database...	0.25	0.25	0.24	28	71515	92	13	75	4	83
TMR_00696	tmRNA links to Rfam database...	0.47	0.44	0.50	50	84978	63	10	40	13	64
TMR_00698	tmRNA links to Rfam database...	0.16	0.16	0.16	17	63081	92	21	71	0	87
TMR_00699	tmRNA links to Rfam database...	0.41	0.41	0.41	42	67059	60	11	49	0	60
TMR_00702	tmRNA links to Rfam database...	0.25	0.26	0.25	26	67055	83	7	73	3	74
TMR_00703	tmRNA links to Rfam database...	0.38	0.37	0.40	37	67435	58	5	51	2	62
TMR_00706	tmRNA links to Rfam database...	0.44	0.41	0.47	42	66341	48	8	39	1	61
TMR_00711	tmRNA links to Rfam database...	0.55	0.56	0.53	55	67793	55	12	36	7	43
TMR_00712	tmRNA links to Rfam database...	0.27	0.28	0.26	30	78491	85	18	67	0	79
TMR_00716	tmRNA links to Rfam database...	0.12	0.12	0.13	12	62741	86	6	76	4	88

^top

Performance of Vsfold5 - scored lower in this pairwise comparison

1. Total counts & total scores for Vsfold5

Total Base Pair Counts
Total TP	17272
Total TN	33300057
Total FP	34447
Total FP CONTRA	4615
Total FP INCONS	27035
Total FP COMP	2797
Total FN	37279

Total Scores
MCC	0.333
Average MCC ± 95% Confidence Intervals	0.346 ± 0.015
Sensitivity	0.317
Positive Predictive Value	0.353
Nr of predictions	591

^top

2. Individual counts for Vsfold5 [ download as .csv ]

RNA Chain	Rfam family	MCC	SENS	PPV	TP	TN	FP	FP CONTRA	FP INCONS	FP COMP	FN
ASE_00001	RNaseP_arch links to Rfam database...	0.40	0.37	0.44	28	34127	39	6	30	3	47
ASE_00002	RNaseP_arch links to Rfam database...	0.48	0.42	0.53	31	35453	31	4	23	4	42
ASE_00004	RNaseP_bact_a links to Rfam database...	0.33	0.32	0.35	31	47807	58	8	49	1	66
ASE_00005	RNaseP_bact_a links to Rfam database...	0.41	0.37	0.46	43	57877	54	0	50	4	74
ASE_00006	RNaseP_bact_a links to Rfam database...	0.42	0.40	0.45	37	47504	46	4	41	1	56
ASE_00007	RNaseP_bact_a links to Rfam database...	0.37	0.34	0.41	37	59595	57	2	51	4	73
ASE_00009	RNaseP_arch links to Rfam database...	0.20	0.19	0.20	13	26042	52	0	51	1	54
ASE_00012	RNaseP_bact_a links to Rfam database...	0.39	0.36	0.42	44	73815	66	10	51	5	79
ASE_00014	RNaseP_arch links to Rfam database...	0.44	0.44	0.45	47	54180	59	8	50	1	59
ASE_00017	RNaseP_nuc links to Rfam database...	0.33	0.38	0.30	24	50960	69	23	33	13	40
ASE_00018	RNaseP_bact_a links to Rfam database...	0.44	0.39	0.50	52	80497	52	2	50	0	82
ASE_00020	RNaseP_bact_a links to Rfam database...	0.21	0.19	0.24	24	73818	80	5	73	2	102
ASE_00022	RNaseP_bact_b links to Rfam database...	0.36	0.32	0.41	40	82930	60	4	54	2	84
ASE_00023	RNaseP_bact_a links to Rfam database...	0.44	0.43	0.46	54	84137	66	10	54	2	73
ASE_00025	RNaseP_nuc links to Rfam database...	0.18	0.20	0.16	14	78520	107	25	47	35	57
ASE_00026	RNaseP_bact_a links to Rfam database...	0.33	0.30	0.36	33	59593	61	11	48	2	77
ASE_00028	RNaseP_bact_b links to Rfam database...	0.37	0.35	0.40	44	84557	66	4	61	1	82
ASE_00029	RNaseP_bact_a links to Rfam database...	0.38	0.36	0.39	44	82916	68	9	59	0	78
ASE_00030	RNaseP_bact_a links to Rfam database...	0.33	0.30	0.36	44	85369	78	7	71	0	101
ASE_00031	RNaseP_bact_a links to Rfam database...	0.49	0.45	0.54	57	86630	50	7	42	1	69
ASE_00032	RNaseP_bact_a links to Rfam database...	0.27	0.27	0.28	32	80084	84	13	71	0	86
ASE_00033	RNaseP_bact_a links to Rfam database...	0.00	0.00	0.00	0	64980	0	0	0	0	121
ASE_00035	RNaseP_bact_a links to Rfam database...	0.21	0.20	0.23	24	70394	82	8	74	0	94
ASE_00036	RNaseP_bact_a links to Rfam database...	0.36	0.33	0.39	44	75742	70	4	65	1	88
ASE_00037	RNaseP_bact_a links to Rfam database...	0.00	0.00	0.00	0	59340	0	0	0	0	110
ASE_00038	RNaseP_bact_a links to Rfam database...	0.49	0.47	0.53	47	53539	43	2	40	1	54
ASE_00040	RNaseP_bact_a links to Rfam database...	0.25	0.23	0.27	30	78892	83	5	76	2	103
ASE_00041	RNaseP_bact_a links to Rfam database...	0.42	0.39	0.45	42	57537	51	6	45	0	66
ASE_00044	RNaseP_bact_a links to Rfam database...	0.47	0.45	0.49	47	54519	50	6	43	1	58
ASE_00046	RNaseP_bact_a links to Rfam database...	0.23	0.20	0.26	21	50322	61	4	56	1	82
ASE_00047	RNaseP_bact_a links to Rfam database...	0.43	0.38	0.49	50	74203	52	4	48	0	80
ASE_00052	RNaseP_bact_a links to Rfam database...	0.36	0.31	0.41	35	61340	51	7	43	1	77
ASE_00053	RNaseP_bact_a links to Rfam database...	0.53	0.50	0.56	66	79284	51	9	42	0	67
ASE_00056	-	0.39	0.38	0.41	27	30810	43	4	35	4	45
ASE_00057	RNaseP_bact_a links to Rfam database...	0.00	0.00	0.00	0	82215	0	0	0	0	134
ASE_00064	RNaseP_bact_a links to Rfam database...	0.39	0.37	0.40	33	45369	55	1	48	6	56
ASE_00066	RNaseP_bact_a links to Rfam database...	0.52	0.45	0.59	59	72290	45	2	39	4	71
ASE_00068	RNaseP_bact_a links to Rfam database...	0.44	0.40	0.49	34	37605	39	2	34	3	51
ASE_00069	RNaseP_bact_a links to Rfam database...	0.58	0.54	0.64	75	82910	44	6	37	1	65
ASE_00074	RNaseP_bact_a links to Rfam database...	0.40	0.37	0.43	44	67793	61	0	59	2	75
ASE_00076	RNaseP_bact_a links to Rfam database...	0.39	0.36	0.42	43	68162	60	6	54	0	75
ASE_00077	RNaseP_bact_a links to Rfam database...	0.33	0.31	0.34	27	45071	56	4	48	4	59
ASE_00078	RNaseP_bact_a links to Rfam database...	0.32	0.30	0.33	25	42996	55	2	48	5	58
ASE_00079	RNaseP_bact_a links to Rfam database...	0.43	0.40	0.47	40	55525	51	3	43	5	60
ASE_00080	RNaseP_bact_a links to Rfam database...	0.35	0.32	0.38	39	71529	63	4	59	0	84
ASE_00081	RNaseP_bact_a links to Rfam database...	0.39	0.35	0.43	34	49691	45	1	44	0	63
ASE_00082	RNaseP_bact_a links to Rfam database...	0.44	0.41	0.47	48	70397	63	5	50	8	68
ASE_00083	RNaseP_bact_a links to Rfam database...	0.62	0.57	0.67	63	62387	35	5	26	4	47
ASE_00084	RNaseP_bact_a links to Rfam database...	0.47	0.44	0.49	44	53539	50	3	42	5	55
ASE_00087	RNaseP_bact_a links to Rfam database...	0.45	0.39	0.51	56	88301	57	3	50	4	88
ASE_00089	-	0.37	0.33	0.43	26	31314	35	2	33	0	53
ASE_00090	RNaseP_bact_a links to Rfam database...	0.50	0.50	0.52	50	55514	50	4	43	3	51
ASE_00092	RNaseP_bact_a links to Rfam database...	0.41	0.38	0.44	43	63448	55	8	47	0	70
ASE_00096	RNaseP_bact_a links to Rfam database...	0.57	0.53	0.60	61	63445	40	3	37	0	54
ASE_00099	RNaseP_bact_a links to Rfam database...	0.46	0.42	0.52	50	64523	48	2	45	1	70
ASE_00100	RNaseP_nuc links to Rfam database...	0.38	0.37	0.38	28	82142	96	6	39	51	48
ASE_00104	RNaseP_bact_a links to Rfam database...	0.58	0.54	0.62	64	64158	40	3	36	1	55
ASE_00105	RNaseP_bact_a links to Rfam database...	0.31	0.29	0.33	32	64164	67	6	59	2	79
ASE_00107	RNaseP_bact_a links to Rfam database...	0.43	0.39	0.47	50	73046	57	5	52	0	77
ASE_00108	RNaseP_nuc links to Rfam database...	0.25	0.27	0.24	17	46899	79	12	43	24	46
ASE_00111	RNaseP_nuc links to Rfam database...	0.24	0.26	0.22	15	50018	78	13	40	25	42
ASE_00112	RNaseP_bact_a links to Rfam database...	0.43	0.40	0.47	46	75368	53	7	45	1	70
ASE_00115	RNaseP_bact_a links to Rfam database...	0.49	0.48	0.52	48	54522	53	3	42	8	53
ASE_00116	RNaseP_arch links to Rfam database...	0.16	0.15	0.17	10	31566	51	5	45	1	56
ASE_00118	RNaseP_bact_a links to Rfam database...	0.38	0.35	0.40	36	60637	54	4	49	1	66
ASE_00119	RNaseP_bact_a links to Rfam database...	0.71	0.68	0.75	73	62738	28	6	18	4	35
ASE_00120	RNaseP_arch links to Rfam database...	0.20	0.19	0.21	18	46885	68	5	63	0	76
ASE_00121	RNaseP_arch links to Rfam database...	0.13	0.13	0.14	12	45065	75	9	64	2	80
ASE_00122	RNaseP_bact_a links to Rfam database...	0.53	0.48	0.58	42	43293	31	0	30	1	46
ASE_00123	RNaseP_bact_a links to Rfam database...	0.38	0.36	0.39	31	38424	52	3	45	4	54
ASE_00125	RNaseP_bact_a links to Rfam database...	0.43	0.41	0.44	36	39259	45	5	40	0	52
ASE_00126	RNaseP_bact_a links to Rfam database...	0.48	0.44	0.53	36	40402	36	2	30	4	46
ASE_00128	RNaseP_bact_a links to Rfam database...	0.54	0.51	0.57	51	53211	43	3	36	4	49
ASE_00129	RNaseP_bact_a links to Rfam database...	0.61	0.57	0.66	63	62740	33	7	25	1	48
ASE_00131	RNaseP_bact_a links to Rfam database...	0.42	0.38	0.46	32	39271	42	4	33	5	53
ASE_00132	RNaseP_bact_a links to Rfam database...	0.34	0.33	0.36	31	50316	58	8	48	2	64
ASE_00134	RNaseP_bact_a links to Rfam database...	0.28	0.26	0.30	25	50320	62	6	52	4	70
ASE_00135	RNaseP_bact_a links to Rfam database...	0.35	0.32	0.38	35	63097	63	3	55	5	74
ASE_00136	RNaseP_bact_a links to Rfam database...	0.66	0.62	0.71	57	48125	31	3	20	8	35
ASE_00137	RNaseP_bact_a links to Rfam database...	0.56	0.53	0.58	52	48427	38	1	36	1	46
ASE_00138	RNaseP_bact_a links to Rfam database...	0.45	0.43	0.47	35	40395	42	5	35	2	46
ASE_00139	RNaseP_bact_a links to Rfam database...	0.52	0.48	0.56	50	54196	42	1	38	3	54
ASE_00140	RNaseP_bact_a links to Rfam database...	0.46	0.42	0.50	53	70771	52	3	49	0	72
ASE_00142	RNaseP_bact_a links to Rfam database...	0.43	0.41	0.46	50	67053	58	7	51	0	72
ASE_00145	RNaseP_arch links to Rfam database...	0.31	0.29	0.33	32	70027	67	6	60	1	79
ASE_00146	RNaseP_bact_a links to Rfam database...	0.32	0.28	0.37	35	70782	61	1	58	2	89
ASE_00151	RNaseP_bact_a links to Rfam database...	0.27	0.24	0.29	24	51921	58	9	49	0	74
ASE_00153	RNaseP_nuc links to Rfam database...	0.28	0.32	0.26	23	57540	91	12	55	24	50
ASE_00154	RNaseP_arch links to Rfam database...	0.19	0.18	0.22	19	65253	70	4	65	1	88
ASE_00155	RNaseP_arch links to Rfam database...	0.31	0.30	0.34	42	93403	86	7	76	3	100
ASE_00163	RNaseP_bact_a links to Rfam database...	0.37	0.37	0.38	34	53211	63	7	49	7	59
ASE_00165	RNaseP_bact_a links to Rfam database...	0.42	0.40	0.44	40	52884	51	4	47	0	61
ASE_00168	RNaseP_nuc links to Rfam database...	0.30	0.34	0.26	22	60641	87	19	44	24	42
ASE_00169	RNaseP_bact_a links to Rfam database...	0.55	0.51	0.60	55	57199	38	4	33	1	52
ASE_00170	RNaseP_bact_a links to Rfam database...	0.40	0.40	0.41	37	48737	54	10	44	0	56
ASE_00171	RNaseP_bact_a links to Rfam database...	0.51	0.46	0.58	43	48442	35	5	26	4	51
ASE_00172	RNaseP_bact_a links to Rfam database...	0.48	0.46	0.51	49	58900	47	8	39	0	57
ASE_00174	RNaseP_bact_a links to Rfam database...	0.48	0.46	0.51	50	60977	48	1	47	0	59
ASE_00175	RNaseP_bact_a links to Rfam database...	0.35	0.34	0.36	36	59932	65	3	60	2	71
ASE_00176	RNaseP_bact_a links to Rfam database...	0.54	0.51	0.57	56	59932	43	1	42	0	54
ASE_00179	RNaseP_bact_a links to Rfam database...	0.53	0.54	0.53	45	44168	41	10	30	1	39
ASE_00180	RNaseP_bact_a links to Rfam database...	0.00	0.00	0.00	0	51360	0	0	0	0	100
ASE_00181	RNaseP_bact_a links to Rfam database...	0.55	0.51	0.59	54	57539	41	2	35	4	52
ASE_00182	RNaseP_bact_a links to Rfam database...	0.38	0.34	0.43	46	84149	60	5	55	0	90
ASE_00183	RNaseP_bact_a links to Rfam database...	0.53	0.50	0.56	57	61323	47	4	41	2	56
ASE_00184	RNaseP_bact_a links to Rfam database...	0.41	0.38	0.44	39	54526	55	1	49	5	63
ASE_00185	RNaseP_bact_a links to Rfam database...	0.37	0.35	0.40	45	73423	68	6	62	0	83
ASE_00186	RNaseP_bact_a links to Rfam database...	0.36	0.34	0.39	45	78888	72	6	64	2	87
ASE_00187	RNaseP_arch links to Rfam database...	0.30	0.30	0.30	34	68523	78	11	67	0	81
ASE_00189	RNaseP_bact_b links to Rfam database...	0.37	0.34	0.39	35	63101	55	8	46	1	67
ASE_00190	RNaseP_bact_b links to Rfam database...	0.37	0.32	0.43	29	45384	42	2	36	4	61
ASE_00192	RNaseP_bact_b links to Rfam database...	0.21	0.20	0.22	27	84542	99	7	90	2	106
ASE_00194	RNaseP_bact_b links to Rfam database...	0.35	0.33	0.38	39	73432	65	15	50	0	80
ASE_00195	-	0.28	0.26	0.30	35	86205	81	7	73	1	98
ASE_00196	RNaseP_arch links to Rfam database...	0.30	0.28	0.32	21	31561	48	4	40	4	54
ASE_00197	RNaseP_bact_a links to Rfam database...	0.27	0.25	0.30	36	89132	87	7	78	2	109
ASE_00198	RNaseP_bact_a links to Rfam database...	0.42	0.40	0.45	41	52558	56	1	50	5	61
ASE_00203	RNaseP_bact_a links to Rfam database...	0.00	0.00	0.00	0	46665	0	0	0	0	96
ASE_00204	RNaseP_bact_b links to Rfam database...	0.39	0.35	0.43	39	67805	56	13	39	4	73
ASE_00205	RNaseP_arch links to Rfam database...	0.24	0.24	0.25	22	45967	68	10	57	1	68
ASE_00209	RNaseP_arch links to Rfam database...	0.16	0.15	0.17	13	42993	65	5	60	0	75
ASE_00210	RNaseP_arch links to Rfam database...	0.20	0.20	0.20	13	27197	53	8	43	2	52
ASE_00213	RNaseP_arch links to Rfam database...	0.22	0.21	0.23	14	27200	49	10	37	2	52
ASE_00214	RNaseP_bact_a links to Rfam database...	0.57	0.55	0.59	57	56183	47	3	37	7	46
ASE_00215	RNaseP_bact_a links to Rfam database...	0.49	0.43	0.57	43	48440	37	6	27	4	56
ASE_00216	RNaseP_bact_a links to Rfam database...	0.63	0.61	0.66	50	39264	27	4	22	1	32
ASE_00217	RNaseP_bact_a links to Rfam database...	0.13	0.12	0.14	11	40394	67	2	63	2	79
ASE_00221	RNaseP_bact_a links to Rfam database...	0.40	0.37	0.43	43	64520	57	5	52	0	74
ASE_00227	RNaseP_bact_a links to Rfam database...	0.33	0.30	0.37	40	78896	67	6	61	0	93
ASE_00228	RNaseP_bact_a links to Rfam database...	0.48	0.47	0.49	40	46890	41	13	28	0	46
ASE_00229	RNaseP_bact_a links to Rfam database...	0.52	0.49	0.54	43	42407	36	8	28	0	44
ASE_00231	RNaseP_bact_a links to Rfam database...	0.59	0.57	0.62	55	47806	34	3	31	0	41
ASE_00232	RNaseP_bact_a links to Rfam database...	0.44	0.43	0.44	36	38422	45	7	38	0	48
ASE_00234	RNaseP_bact_a links to Rfam database...	0.27	0.24	0.31	31	75367	68	4	64	0	98
ASE_00237	RNaseP_nuc links to Rfam database...	0.27	0.30	0.24	17	45681	77	14	41	22	39
ASE_00238	RNaseP_bact_a links to Rfam database...	0.30	0.28	0.32	32	64162	67	7	60	0	82
ASE_00240	RNaseP_bact_a links to Rfam database...	0.22	0.20	0.23	19	46584	64	2	60	2	74
ASE_00241	RNaseP_bact_a links to Rfam database...	0.35	0.33	0.38	29	43879	52	0	48	4	58
ASE_00242	RNaseP_bact_a links to Rfam database...	0.44	0.43	0.45	48	60969	58	11	47	0	64
ASE_00246	RNaseP_nuc links to Rfam database...	0.00	0.00	0.00	0	48205	0	0	0	0	67
ASE_00247	RNaseP_nuc links to Rfam database...	0.32	0.36	0.29	23	54206	85	15	41	29	41
ASE_00248	RNaseP_bact_a links to Rfam database...	0.45	0.43	0.48	49	62378	57	4	50	3	65
ASE_00250	RNaseP_bact_a links to Rfam database...	0.43	0.40	0.47	53	78890	63	9	51	3	78
ASE_00254	RNaseP_bact_a links to Rfam database...	0.32	0.30	0.33	25	36781	55	4	46	5	57
ASE_00255	RNaseP_bact_a links to Rfam database...	0.35	0.32	0.38	42	74579	70	12	58	0	88
ASE_00257	RNaseP_bact_a links to Rfam database...	0.55	0.52	0.59	50	50955	35	5	30	0	47
ASE_00259	RNaseP_bact_a links to Rfam database...	0.42	0.38	0.47	46	73056	52	7	44	1	75
ASE_00263	RNaseP_bact_a links to Rfam database...	0.37	0.34	0.39	41	70396	63	6	57	0	79
ASE_00264	RNaseP_nuc links to Rfam database...	0.38	0.35	0.42	35	49057	50	2	47	1	65
ASE_00267	RNaseP_bact_a links to Rfam database...	0.24	0.23	0.25	20	45070	64	6	54	4	68
ASE_00270	RNaseP_bact_a links to Rfam database...	0.37	0.35	0.38	45	72273	73	4	68	1	83
ASE_00274	RNaseP_bact_a links to Rfam database...	0.36	0.34	0.39	35	55522	54	8	46	0	68
ASE_00277	RNaseP_bact_a links to Rfam database...	0.30	0.29	0.31	26	48122	57	13	44	0	65
ASE_00279	RNaseP_bact_a links to Rfam database...	0.32	0.30	0.34	30	53214	57	6	51	0	71
ASE_00280	RNaseP_bact_a links to Rfam database...	0.42	0.39	0.46	38	51921	45	6	38	1	60
ASE_00281	RNaseP_bact_a links to Rfam database...	0.45	0.40	0.52	35	44484	37	3	29	5	53
ASE_00282	RNaseP_bact_a links to Rfam database...	0.48	0.43	0.53	55	77711	55	3	46	6	72
ASE_00283	RNaseP_bact_a links to Rfam database...	0.46	0.43	0.49	46	61683	47	10	37	0	61
ASE_00284	RNaseP_bact_a links to Rfam database...	0.27	0.26	0.28	28	58211	73	7	65	1	80
ASE_00285	RNaseP_bact_a links to Rfam database...	0.40	0.37	0.44	45	68903	58	1	57	0	77
ASE_00286	RNaseP_bact_a links to Rfam database...	0.38	0.36	0.41	33	46584	50	4	44	2	59
ASE_00287	RNaseP_bact_a links to Rfam database...	0.39	0.34	0.45	35	54868	45	1	42	2	68
ASE_00288	RNaseP_bact_a links to Rfam database...	0.36	0.33	0.39	31	45976	50	10	39	1	62
ASE_00291	-	0.41	0.37	0.46	35	48440	45	3	38	4	59
ASE_00292	RNaseP_bact_a links to Rfam database...	0.00	0.00	0.00	0	81810	0	0	0	0	138
ASE_00295	RNaseP_bact_a links to Rfam database...	0.41	0.37	0.47	48	73818	54	2	52	0	83
ASE_00296	RNaseP_bact_a links to Rfam database...	0.37	0.34	0.41	50	91683	73	5	68	0	95
ASE_00297	RNaseP_bact_a links to Rfam database...	0.44	0.44	0.44	43	52878	54	2	52	0	55
ASE_00298	RNaseP_bact_a links to Rfam database...	0.40	0.37	0.44	42	67432	57	4	50	3	71
ASE_00299	RNaseP_bact_a links to Rfam database...	0.30	0.29	0.32	29	49365	64	13	48	3	71
ASE_00313	RNaseP_nuc links to Rfam database...	0.30	0.28	0.33	25	62405	68	10	41	17	64
ASE_00318	RNaseP_bact_b links to Rfam database...	0.37	0.35	0.40	41	80098	66	10	51	5	77
ASE_00327	RNaseP_nuc links to Rfam database...	0.00	0.00	0.00	0	57291	0	0	0	0	89
ASE_00328	RNaseP_bact_b links to Rfam database...	0.37	0.35	0.39	39	72671	67	4	57	6	73
ASE_00330	RNaseP_nuc links to Rfam database...	0.38	0.38	0.39	34	56193	64	9	44	11	56
ASE_00332	RNaseP_bact_a links to Rfam database...	0.46	0.44	0.48	61	81684	66	10	55	1	77
ASE_00335	RNaseP_bact_b links to Rfam database...	0.39	0.36	0.43	42	75368	61	6	50	5	74
ASE_00337	RNaseP_nuc links to Rfam database...	0.47	0.51	0.43	36	39256	56	10	38	8	35
ASE_00338	RNaseP_nuc links to Rfam database...	0.32	0.31	0.33	30	66340	72	13	47	12	68
ASE_00339	RNaseP_bact_a links to Rfam database...	0.00	0.00	0.00	0	80200	0	0	0	0	119
ASE_00340	RNaseP_bact_a links to Rfam database...	0.58	0.55	0.62	47	45980	29	13	16	0	38
ASE_00342	RNaseP_bact_a links to Rfam database...	0.39	0.35	0.43	40	62388	54	0	53	1	75
ASE_00343	RNaseP_bact_a links to Rfam database...	0.44	0.43	0.45	49	83328	69	11	48	10	64
ASE_00346	RNaseP_arch links to Rfam database...	0.22	0.21	0.24	20	48120	66	3	62	1	77
ASE_00353	RNaseP_bact_a links to Rfam database...	0.59	0.57	0.61	61	57870	39	6	33	0	46
ASE_00359	RNaseP_arch links to Rfam database...	0.18	0.19	0.18	15	42695	69	10	58	1	65
ASE_00360	RNaseP_arch links to Rfam database...	0.22	0.22	0.23	14	29343	46	10	36	0	51
ASE_00361	RNaseP_bact_a links to Rfam database...	0.35	0.32	0.38	41	75357	68	9	59	0	86
ASE_00362	RNaseP_bact_a links to Rfam database...	0.48	0.46	0.51	42	48122	41	6	35	0	49
ASE_00363	RNaseP_bact_a links to Rfam database...	0.42	0.41	0.43	39	51269	58	2	50	6	55
ASE_00364	RNaseP_bact_a links to Rfam database...	0.31	0.30	0.33	31	54190	65	4	60	1	74
ASE_00366	RNaseP_bact_a links to Rfam database...	0.35	0.35	0.35	34	58556	66	14	49	3	64
ASE_00367	RNaseP_bact_a links to Rfam database...	0.26	0.24	0.27	21	42994	60	3	53	4	65
ASE_00369	RNaseP_bact_a links to Rfam database...	0.37	0.36	0.38	38	55846	66	0	61	5	69
ASE_00370	RNaseP_bact_a links to Rfam database...	0.41	0.38	0.44	32	41833	47	1	39	7	52
ASE_00372	RNaseP_bact_a links to Rfam database...	0.45	0.42	0.48	42	51915	48	6	40	2	58
ASE_00374	RNaseP_bact_a links to Rfam database...	0.44	0.42	0.46	37	44770	43	6	37	0	51
ASE_00375	RNaseP_bact_a links to Rfam database...	0.49	0.47	0.52	52	60278	51	1	47	3	58
ASE_00376	RNaseP_bact_a links to Rfam database...	0.45	0.42	0.48	44	56861	52	4	44	4	61
ASE_00377	RNaseP_bact_a links to Rfam database...	0.60	0.56	0.65	60	57537	37	2	31	4	47
ASE_00379	RNaseP_bact_a links to Rfam database...	0.36	0.36	0.37	32	45969	57	11	44	2	57
ASE_00380	RNaseP_bact_a links to Rfam database...	0.57	0.56	0.59	55	54853	38	10	28	0	44
ASE_00382	RNaseP_bact_a links to Rfam database...	0.44	0.42	0.47	35	41831	43	0	39	4	49
ASE_00383	RNaseP_bact_a links to Rfam database...	0.44	0.41	0.47	43	54524	50	8	40	2	62
ASE_00384	RNaseP_bact_a links to Rfam database...	0.50	0.47	0.54	43	48437	44	2	34	8	49
ASE_00385	RNaseP_bact_a links to Rfam database...	0.45	0.41	0.51	33	41840	32	4	28	0	48
ASE_00386	RNaseP_bact_a links to Rfam database...	0.40	0.38	0.44	36	50321	51	8	38	5	60
ASE_00387	RNaseP_bact_a links to Rfam database...	0.54	0.49	0.59	51	55858	39	4	32	3	53
ASE_00388	RNaseP_bact_a links to Rfam database...	0.50	0.47	0.54	42	45675	41	2	34	5	47
ASE_00390	RNaseP_bact_a links to Rfam database...	0.50	0.46	0.54	39	42123	38	2	31	5	46
ASE_00393	RNaseP_bact_a links to Rfam database...	0.45	0.43	0.48	40	47811	49	1	43	5	53
ASE_00394	RNaseP_bact_a links to Rfam database...	0.32	0.30	0.35	28	46890	53	9	44	0	65
ASE_00395	RNaseP_bact_a links to Rfam database...	0.45	0.43	0.48	36	41541	43	5	34	4	48
ASE_00396	RNaseP_bact_a links to Rfam database...	0.44	0.42	0.45	35	41539	44	7	35	2	48
ASE_00397	RNaseP_bact_a links to Rfam database...	0.35	0.33	0.38	35	54523	58	1	56	1	70
ASE_00398	RNaseP_bact_a links to Rfam database...	0.48	0.44	0.52	46	55857	46	2	40	4	58
ASE_00400	RNaseP_bact_a links to Rfam database...	0.52	0.49	0.56	52	57877	45	5	36	4	54
ASE_00401	RNaseP_bact_a links to Rfam database...	0.37	0.35	0.39	44	76914	70	6	64	0	82
ASE_00402	RNaseP_bact_a links to Rfam database...	0.30	0.28	0.33	24	42413	49	5	44	0	61
ASE_00403	RNaseP_bact_a links to Rfam database...	0.35	0.33	0.38	35	55853	62	5	52	5	72
ASE_00404	RNaseP_bact_a links to Rfam database...	0.26	0.25	0.28	21	42996	58	4	50	4	64
ASE_00406	RNaseP_bact_a links to Rfam database...	0.47	0.45	0.51	42	48745	47	0	41	6	52
ASE_00408	-	0.37	0.35	0.40	25	32322	38	5	33	0	46
ASE_00409	-	0.42	0.41	0.43	34	40962	45	7	38	0	49
ASE_00411	RNaseP_bact_a links to Rfam database...	0.34	0.34	0.34	30	49367	60	7	51	2	59
ASE_00412	RNaseP_bact_a links to Rfam database...	0.32	0.30	0.36	31	58224	56	7	49	0	74
ASE_00413	RNaseP_bact_a links to Rfam database...	0.45	0.44	0.46	36	44473	46	4	38	4	45
ASE_00414	RNaseP_bact_a links to Rfam database...	0.24	0.22	0.26	21	46280	62	0	59	3	74
ASE_00415	RNaseP_bact_a links to Rfam database...	0.40	0.38	0.42	39	54854	56	4	49	3	64
ASE_00416	RNaseP_bact_a links to Rfam database...	0.00	0.00	0.00	0	77421	0	0	0	0	127
ASE_00417	RNaseP_arch links to Rfam database...	0.37	0.37	0.37	37	54514	65	13	51	1	63
ASE_00418	RNaseP_arch links to Rfam database...	0.22	0.21	0.23	16	38712	58	1	52	5	59
ASE_00419	RNaseP_bact_a links to Rfam database...	0.61	0.58	0.65	60	54853	34	3	30	1	43
ASE_00422	RNaseP_bact_a links to Rfam database...	0.55	0.52	0.58	49	46886	41	2	34	5	45
ASE_00423	RNaseP_bact_a links to Rfam database...	0.51	0.51	0.51	56	56844	53	11	42	0	53
ASE_00426	RNaseP_bact_a links to Rfam database...	0.34	0.32	0.35	35	60975	65	3	62	0	73
ASE_00428	RNaseP_bact_a links to Rfam database...	0.24	0.24	0.25	30	76515	91	2	89	0	95
ASE_00429	-	0.34	0.32	0.37	21	28146	41	0	36	5	45
ASE_00430	RNaseP_bact_a links to Rfam database...	0.62	0.58	0.66	56	46886	34	2	27	5	41
ASE_00431	RNaseP_bact_a links to Rfam database...	0.26	0.23	0.29	22	46283	56	3	52	1	73
ASE_00434	RNaseP_bact_b links to Rfam database...	0.36	0.34	0.39	37	68169	64	7	52	5	73
ASE_00437	RNaseP_bact_a links to Rfam database...	0.00	0.00	0.00	0	79401	0	0	0	0	135
ASE_00438	RNaseP_bact_a links to Rfam database...	0.30	0.28	0.32	33	65962	71	2	69	0	83
ASE_00441	RNaseP_bact_a links to Rfam database...	0.33	0.30	0.35	34	64164	63	6	57	0	78
ASE_00447	RNaseP_bact_a links to Rfam database...	0.36	0.31	0.41	36	60291	52	1	50	1	80
ASE_00448	RNaseP_bact_a links to Rfam database...	0.36	0.34	0.39	38	64164	59	4	55	0	74
ASE_00451	RNaseP_bact_a links to Rfam database...	0.35	0.32	0.38	40	70771	65	2	63	0	85
CRW_00016	Intron_gpI links to Rfam database...	0.40	0.38	0.42	45	77315	67	4	57	6	75
CRW_00608	-	0.42	0.39	0.45	31	35709	38	6	32	0	48
CRW_00610	Intron_gpI links to Rfam database...	0.29	0.28	0.30	23	36238	57	6	48	3	58
CRW_00611	-	0.67	0.61	0.74	46	31313	16	3	13	0	29
CRW_00613	Intron_gpI links to Rfam database...	0.48	0.46	0.51	36	34909	41	2	33	6	42
CRW_00618	Intron_gpI links to Rfam database...	0.24	0.26	0.23	16	56210	76	9	45	22	45
CRW_00629	-	0.35	0.34	0.36	42	91261	79	9	66	4	80
CRW_00632	-	0.31	0.29	0.33	37	82915	79	6	70	3	91
CRW_00633	Intron_gpI links to Rfam database...	0.00	0.00	0.00	0	63546	0	0	0	0	106
CRW_00634	Intron_gpI links to Rfam database...	0.32	0.33	0.32	31	64523	75	10	56	9	63
CRW_00641	-	0.29	0.29	0.29	22	39827	59	9	45	5	54
CRW_00642	-	0.33	0.37	0.30	24	47199	66	14	41	11	41
CRW_00645	-	0.58	0.57	0.58	38	35446	35	7	20	8	29
CRW_00646	-	0.55	0.55	0.56	35	34918	39	4	23	12	29
CRW_00651	-	0.34	0.35	0.34	42	100004	88	15	67	6	79
CRW_00653	-	0.59	0.57	0.60	77	94702	53	6	45	2	57
CRW_00654	-	0.57	0.55	0.60	68	78096	47	4	42	1	56
CRW_00655	-	0.52	0.51	0.54	63	89136	56	13	41	2	61
CRW_00656	-	0.19	0.19	0.19	24	90401	102	9	91	2	105
CRW_00658	-	0.19	0.19	0.19	19	74591	87	12	69	6	83
CRW_00659	-	0.00	0.00	0.00	0	32318	71	12	55	4	61
CRW_00660	-	0.58	0.58	0.58	35	22095	26	6	19	1	25
CRW_00661	-	0.00	0.00	0.00	0	24245	66	14	51	1	51
CRW_00662	-	0.15	0.15	0.15	10	28614	60	7	49	4	55
CRW_00663	-	0.16	0.16	0.17	10	26046	57	6	44	7	51
CRW_00664	-	0.00	0.00	0.00	0	53628	0	0	0	0	78
CRW_00665	-	0.08	0.08	0.08	4	23600	50	8	41	1	44
CRW_00666	-	0.35	0.36	0.35	45	96014	84	8	74	2	81
CRW_00670	Intron_gpI links to Rfam database...	0.40	0.38	0.43	45	70020	61	3	57	1	75
CRW_00671	Intron_gpI links to Rfam database...	0.29	0.26	0.33	31	62740	64	2	62	0	86
CRW_00672	Intron_gpI links to Rfam database...	0.39	0.40	0.39	44	72278	70	14	54	2	67
CRW_00673	-	0.44	0.45	0.43	47	100018	80	20	43	17	58
CRW_00674	Intron_gpI links to Rfam database...	0.33	0.31	0.36	38	83330	74	5	63	6	86
CRW_00676	Intron_gpI links to Rfam database...	0.34	0.36	0.33	41	93405	88	19	63	6	74
CRW_00677	-	0.41	0.41	0.42	43	71908	64	9	50	5	62
CRW_00679	-	0.35	0.36	0.35	38	76527	79	11	60	8	69
CRW_00687	-	0.28	0.30	0.27	20	28606	55	9	45	1	46
CRW_00688	-	0.75	0.74	0.76	42	21890	16	2	11	3	15
CRW_00689	-	0.33	0.32	0.33	25	33594	53	8	43	2	52
CRW_00690	-	0.40	0.39	0.40	27	33344	45	13	27	5	42
CRW_00691	-	0.63	0.64	0.62	43	27192	27	3	23	1	24
CRW_00692	Intron_gpI links to Rfam database...	0.36	0.38	0.34	34	68534	67	21	46	0	56
CRW_00693	-	0.42	0.42	0.43	51	89135	74	5	62	7	71
CRW_00694	-	0.35	0.34	0.36	42	85787	79	11	65	3	80
CRW_00699	-	0.31	0.29	0.32	37	91690	79	10	69	0	89
CRW_00703	-	0.29	0.30	0.28	20	40398	58	6	46	6	46
CRW_00715	-	0.37	0.34	0.41	35	69292	53	11	40	2	69
CRW_00721	-	0.26	0.26	0.26	18	58585	76	9	41	26	50
PDB_00005	Tymo_tRNA-like links to Rfam database...	0.78	0.79	0.79	11	932	3	1	2	0	3
PDB_00018	-	0.68	0.55	0.85	11	1022	2	2	0	0	9
PDB_00020	-	0.80	0.70	0.93	14	765	1	0	1	0	6
PDB_00041	-	0.96	0.92	1.00	11	619	0	0	0	0	1
PDB_00053	-	1.00	1.00	1.00	11	424	0	0	0	0	0
PDB_00056	-	0.90	0.81	1.00	13	617	0	0	0	0	3
PDB_00078	-	0.39	0.35	0.44	40	49679	51	3	48	0	75
PDB_00123	-	0.35	0.33	0.38	12	4154	20	0	20	0	24
PDB_00124	-	0.86	0.90	0.82	9	485	2	2	0	0	1
PDB_00128	-	0.61	0.57	0.67	8	484	4	0	4	0	6
PDB_00134	-	0.79	0.63	1.00	5	373	0	0	0	0	3
PDB_00138	-	0.79	0.63	1.00	5	373	0	0	0	0	3
PDB_00209	-	0.96	1.00	0.92	11	549	1	1	0	0	0
PDB_00243	-	0.96	0.92	1.00	11	619	0	0	0	0	1
PDB_00278	-	0.60	0.57	0.63	41	24911	24	10	14	0	31
PDB_00352	-	0.72	0.68	0.76	13	1208	4	3	1	0	6
PDB_00370	-	0.10	0.12	0.08	3	15187	35	16	19	0	22
PDB_00423	-	0.55	0.50	0.60	37	26734	25	6	19	0	37
PDB_00447	-	0.95	0.91	1.00	40	7100	0	0	0	0	4
PDB_00571	tRNA links to Rfam database...	0.87	0.80	0.95	20	3300	1	1	0	0	5
PDB_00701	-	0.26	0.25	0.28	27	45354	71	6	64	1	82
PDB_00713	-	0.69	0.62	0.76	13	1999	4	0	4	0	8
PDB_00716	HDV_ribozyme links to Rfam database...	0.17	0.17	0.18	4	2679	19	0	18	1	19
PDB_00747	-	0.55	0.51	0.60	41	24463	27	2	25	0	39
PDB_00804	-	0.19	0.20	0.18	10	15344	48	6	40	2	40
PDB_00827	Intron_gpI links to Rfam database...	0.51	0.42	0.62	34	26973	22	0	21	1	47
PDB_00828	Purine links to Rfam database...	0.86	0.74	1.00	20	2465	0	0	0	0	7
PDB_00829	Purine links to Rfam database...	0.83	0.79	0.86	19	2256	3	2	1	0	5
PDB_00842	-	0.79	0.63	1.00	5	373	0	0	0	0	3
PDB_00851	-	0.54	0.44	0.67	18	4726	9	0	9	0	23
PDB_00857	-	1.00	1.00	1.00	15	1066	0	0	0	0	0
PDB_00874	-	-0.02	0.00	0.00	0	932	14	0	14	0	20
PDB_00886	-	0.64	0.60	0.69	24	4151	11	0	11	0	16
PDB_00917	-	0.66	0.60	0.72	57	35166	30	4	18	8	38
PDB_00918	-	0.75	0.57	1.00	4	321	0	0	0	0	3
PDB_00919	RNaseP_bact_a links to Rfam database...	0.23	0.20	0.26	21	44171	61	0	61	0	82
PDB_01009	tRNA links to Rfam database...	0.90	0.90	0.90	19	2464	3	0	2	1	2
PDB_01020	Purine links to Rfam database...	0.82	0.78	0.86	18	2257	4	2	1	1	5
PDB_01040	-	0.30	0.30	0.33	6	1110	12	0	12	0	14
PDB_01059	-	0.75	0.57	1.00	4	227	0	0	0	0	3
PDB_01070	-	0.43	0.37	0.50	20	12680	20	0	20	0	34
PDB_01073	SAM links to Rfam database...	0.56	0.47	0.67	16	4347	9	1	7	1	18
PDB_01092	glmS links to Rfam database...	0.73	0.69	0.77	36	10106	12	2	9	1	16
PDB_01129	-	0.25	0.24	0.26	17	35445	53	14	35	4	54
PDB_01157	-	0.40	0.38	0.42	37	49997	52	10	42	0	61
PDB_01194	-	0.73	0.60	0.90	9	486	1	1	0	0	6
PDB_01201	-	0.79	0.64	1.00	14	1114	0	0	0	0	8
PDB_01203	-	0.73	0.63	0.86	12	1162	2	2	0	0	7
PDB_01250	-	0.16	0.15	0.18	6	12056	30	3	25	2	35
PDB_01260	-	0.41	0.36	0.47	9	1811	10	0	10	0	16
PDB_01281	-	-0.03	0.00	0.00	0	366	12	0	12	0	14
PDB_01299	-	0.90	0.87	0.93	13	889	1	1	0	0	2
PDB_01309	-	-0.01	0.00	0.00	0	9125	55	12	43	0	39
RFA_00598	Telomerase-vert links to Rfam database...	0.07	0.07	0.06	7	84557	111	20	82	9	94
RFA_00632	HDV_ribozyme links to Rfam database...	-0.01	0.00	0.00	0	4073	22	0	22	0	28
RFA_00636	HDV_ribozyme links to Rfam database...	0.58	0.57	0.59	16	3978	11	1	10	0	12
RFA_00767	Corona_pk3 links to Rfam database...	0.21	0.22	0.22	4	1873	14	2	12	0	14
RFA_00768	Corona_pk3 links to Rfam database...	-0.01	0.00	0.00	0	1875	16	1	15	0	18
RFA_00769	Corona_pk3 links to Rfam database...	0.50	0.50	0.50	9	1935	9	4	5	0	9
RFA_00770	Corona_pk3 links to Rfam database...	0.65	0.56	0.77	10	2003	3	3	0	0	8
RFA_00773	Corona_pk3 links to Rfam database...	-0.01	0.00	0.00	0	1936	19	1	16	2	18
RFA_00779	Corona_pk3 links to Rfam database...	0.69	0.61	0.79	11	1939	3	3	0	0	7
RFA_00808	RydC links to Rfam database...	1.00	1.00	1.00	16	2000	0	0	0	0	0
RFA_00809	RydC links to Rfam database...	0.45	0.44	0.47	7	2130	8	1	7	0	9
TMR_00007	tmRNA links to Rfam database...	0.32	0.30	0.35	32	61684	67	11	49	7	76
TMR_00008	tmRNA links to Rfam database...	0.45	0.44	0.46	47	65963	63	14	42	7	59
TMR_00010	tmRNA links to Rfam database...	0.19	0.20	0.19	19	57869	82	13	69	0	77
TMR_00012	tmRNA links to Rfam database...	0.21	0.22	0.20	18	64530	85	14	58	13	63
TMR_00014	tmRNA links to Rfam database...	0.35	0.35	0.35	39	68525	78	15	56	7	71
TMR_00017	tmRNA links to Rfam database...	0.29	0.28	0.29	29	67062	74	8	62	4	73
TMR_00018	tmRNA links to Rfam database...	0.27	0.27	0.27	25	64528	72	10	57	5	67
TMR_00028	tmRNA links to Rfam database...	0.18	0.19	0.18	18	62734	84	12	71	1	79
TMR_00030	tmRNA links to Rfam database...	0.35	0.35	0.35	39	75743	77	11	62	4	72
TMR_00034	tmRNA links to Rfam database...	0.36	0.35	0.37	38	59929	71	2	62	7	72
TMR_00035	tmRNA links to Rfam database...	0.29	0.29	0.29	28	67799	74	11	58	5	70
TMR_00038	tmRNA links to Rfam database...	0.19	0.18	0.19	20	71149	91	11	73	7	90
TMR_00042	tmRNA links to Rfam database...	0.15	0.15	0.15	15	62738	86	16	66	4	83
TMR_00046	tmRNA links to Rfam database...	0.00	0.00	0.00	0	62835	0	0	0	0	96
TMR_00047	tmRNA links to Rfam database...	0.08	0.09	0.07	5	48446	80	16	49	15	52
TMR_00048	tmRNA links to Rfam database...	0.25	0.26	0.25	25	64879	82	15	61	6	70
TMR_00049	tmRNA links to Rfam database...	0.26	0.26	0.26	23	63101	70	14	52	4	64
TMR_00051	tmRNA links to Rfam database...	0.49	0.47	0.51	44	65617	52	8	34	10	50
TMR_00055	tmRNA links to Rfam database...	0.23	0.22	0.24	25	78898	83	16	64	3	89
TMR_00057	tmRNA links to Rfam database...	0.14	0.16	0.12	13	73815	105	31	61	13	66
TMR_00061	tmRNA links to Rfam database...	0.10	0.10	0.11	10	59590	91	12	73	6	89
TMR_00062	tmRNA links to Rfam database...	0.25	0.26	0.23	27	78491	95	18	70	7	77
TMR_00064	tmRNA links to Rfam database...	0.35	0.38	0.33	39	76910	79	25	54	0	64
TMR_00065	tmRNA links to Rfam database...	0.12	0.11	0.13	12	76546	81	15	63	3	94
TMR_00067	tmRNA links to Rfam database...	0.40	0.39	0.40	45	82103	77	4	63	10	69
TMR_00073	tmRNA links to Rfam database...	0.30	0.28	0.32	33	65600	70	4	66	0	84
TMR_00076	tmRNA links to Rfam database...	0.35	0.35	0.35	35	70776	70	11	54	5	65
TMR_00080	tmRNA links to Rfam database...	0.35	0.38	0.32	36	70388	76	16	60	0	60
TMR_00081	tmRNA links to Rfam database...	0.28	0.27	0.29	29	67062	70	8	62	0	77
TMR_00082	tmRNA links to Rfam database...	0.39	0.40	0.38	38	67796	62	11	51	0	58
TMR_00083	tmRNA links to Rfam database...	0.36	0.35	0.36	37	68163	71	6	59	6	68
TMR_00092	tmRNA links to Rfam database...	0.45	0.47	0.44	47	67420	68	12	49	7	54
TMR_00093	tmRNA links to Rfam database...	0.36	0.35	0.36	36	64161	69	14	50	5	66
TMR_00096	tmRNA links to Rfam database...	0.16	0.16	0.16	16	64878	90	15	71	4	84
TMR_00101	tmRNA links to Rfam database...	0.27	0.26	0.27	28	64158	80	15	60	5	79
TMR_00102	tmRNA links to Rfam database...	0.00	0.00	0.00	0	64261	0	0	0	0	101
TMR_00103	tmRNA links to Rfam database...	0.34	0.34	0.33	37	64150	75	12	62	1	71
TMR_00104	-	0.14	0.16	0.12	11	66703	89	27	54	8	59
TMR_00109	tmRNA links to Rfam database...	0.19	0.18	0.20	22	88299	98	12	77	9	100
TMR_00111	tmRNA links to Rfam database...	0.19	0.19	0.20	23	90409	94	9	84	1	99
TMR_00116	tmRNA links to Rfam database...	0.32	0.30	0.34	31	64888	76	11	50	15	73
TMR_00117	tmRNA links to Rfam database...	0.00	0.00	0.00	0	80200	0	0	0	0	118
TMR_00118	tmRNA links to Rfam database...	0.44	0.44	0.44	53	81286	71	12	55	4	67
TMR_00119	tmRNA links to Rfam database...	0.34	0.35	0.33	36	71901	80	15	58	7	68
TMR_00123	tmRNA links to Rfam database...	0.28	0.28	0.29	28	66332	75	9	61	5	73
TMR_00124	tmRNA links to Rfam database...	0.32	0.35	0.31	34	70389	85	15	62	8	64
TMR_00125	tmRNA links to Rfam database...	0.31	0.30	0.31	30	64165	70	13	53	4	69
TMR_00127	tmRNA links to Rfam database...	0.34	0.33	0.34	32	62742	67	11	50	6	65
TMR_00128	tmRNA links to Rfam database...	0.48	0.52	0.45	50	60963	62	10	52	0	46
TMR_00131	tmRNA links to Rfam database...	0.47	0.46	0.48	46	64884	58	12	38	8	53
TMR_00135	tmRNA links to Rfam database...	0.20	0.19	0.21	19	62744	79	12	60	7	80
TMR_00136	tmRNA links to Rfam database...	0.21	0.22	0.20	22	74580	98	19	70	9	79
TMR_00137	tmRNA links to Rfam database...	0.15	0.15	0.15	13	60990	82	6	66	10	76
TMR_00139	tmRNA links to Rfam database...	0.28	0.31	0.26	28	62020	85	19	61	5	63
TMR_00140	tmRNA links to Rfam database...	0.21	0.21	0.21	21	73819	83	7	73	3	79
TMR_00142	tmRNA links to Rfam database...	0.16	0.17	0.15	17	70764	98	20	75	3	85
TMR_00143	tmRNA links to Rfam database...	0.47	0.48	0.48	49	64517	59	10	44	5	54
TMR_00144	tmRNA links to Rfam database...	0.00	0.00	0.00	0	74305	0	0	0	0	103
TMR_00146	tmRNA links to Rfam database...	0.34	0.38	0.31	16	32079	55	12	24	19	26
TMR_00150	tmRNA links to Rfam database...	0.36	0.38	0.35	16	43025	65	12	18	35	26
TMR_00152	tmRNA links to Rfam database...	0.24	0.24	0.24	28	81290	96	12	76	8	87
TMR_00155	tmRNA links to Rfam database...	0.38	0.38	0.38	40	61671	71	12	53	6	64
TMR_00156	tmRNA links to Rfam database...	0.41	0.40	0.41	39	60284	58	9	46	3	58
TMR_00158	tmRNA links to Rfam database...	0.38	0.37	0.39	37	60630	63	12	47	4	62
TMR_00159	tmRNA links to Rfam database...	0.00	0.00	0.00	0	62128	0	0	0	0	92
TMR_00160	tmRNA links to Rfam database...	0.28	0.28	0.29	27	64526	74	8	59	7	68
TMR_00164	tmRNA links to Rfam database...	0.41	0.40	0.42	42	66695	68	6	52	10	64
TMR_00165	tmRNA links to Rfam database...	0.20	0.20	0.20	19	61680	85	6	71	8	78
TMR_00166	tmRNA links to Rfam database...	0.18	0.17	0.19	17	61687	78	8	64	6	84
TMR_00168	tmRNA links to Rfam database...	0.62	0.58	0.67	66	60977	32	1	31	0	48
TMR_00173	tmRNA links to Rfam database...	0.33	0.33	0.33	14	42152	63	10	19	34	28
TMR_00179	tmRNA links to Rfam database...	0.38	0.37	0.39	36	67068	68	16	41	11	62
TMR_00180	tmRNA links to Rfam database...	0.25	0.25	0.26	25	67064	78	14	58	6	74
TMR_00182	tmRNA links to Rfam database...	0.09	0.09	0.08	9	66324	101	12	85	4	93
TMR_00183	tmRNA links to Rfam database...	0.30	0.30	0.30	31	63087	77	14	58	5	72
TMR_00184	tmRNA links to Rfam database...	0.16	0.16	0.16	16	63090	92	15	69	8	86
TMR_00193	tmRNA links to Rfam database...	0.19	0.20	0.19	16	59255	76	17	52	7	64
TMR_00194	tmRNA links to Rfam database...	0.36	0.35	0.37	33	62745	63	12	45	6	60
TMR_00196	tmRNA links to Rfam database...	0.00	0.00	0.00	0	61075	0	0	0	0	97
TMR_00199	tmRNA links to Rfam database...	0.31	0.33	0.31	30	62737	73	19	49	5	62
TMR_00200	-	0.50	0.48	0.53	36	41548	39	7	25	7	39
TMR_00204	tmRNA links to Rfam database...	0.41	0.41	0.41	40	60281	66	13	44	9	57
TMR_00207	tmRNA links to Rfam database...	0.16	0.17	0.17	17	72287	91	9	77	5	86
TMR_00223	tmRNA links to Rfam database...	0.23	0.23	0.23	22	64167	78	12	60	6	73
TMR_00224	tmRNA links to Rfam database...	0.00	0.00	0.00	0	64980	0	0	0	0	101
TMR_00226	tmRNA links to Rfam database...	0.31	0.30	0.31	32	69647	78	10	62	6	73
TMR_00227	tmRNA links to Rfam database...	0.23	0.25	0.23	25	70014	89	15	71	3	76
TMR_00228	tmRNA links to Rfam database...	0.25	0.25	0.26	27	88305	89	14	64	11	81
TMR_00234	tmRNA links to Rfam database...	0.28	0.27	0.30	28	58902	73	8	58	7	74
TMR_00238	tmRNA links to Rfam database...	0.28	0.30	0.26	30	84550	94	12	74	8	71
TMR_00239	tmRNA links to Rfam database...	0.00	0.00	0.00	0	61776	0	0	0	0	96
TMR_00240	tmRNA links to Rfam database...	0.27	0.29	0.25	25	63091	82	23	51	8	60
TMR_00246	-	0.23	0.24	0.22	8	78174	105	4	24	77	26
TMR_00248	tmRNA links to Rfam database...	0.11	0.13	0.10	5	54235	88	15	30	43	33
TMR_00257	tmRNA links to Rfam database...	0.17	0.16	0.18	16	67070	80	6	69	5	82
TMR_00259	tmRNA links to Rfam database...	0.31	0.31	0.31	32	67793	71	11	60	0	71
TMR_00261	tmRNA links to Rfam database...	0.28	0.29	0.28	29	66692	76	18	56	2	72
TMR_00262	tmRNA links to Rfam database...	0.27	0.26	0.27	27	74206	76	17	55	4	77
TMR_00271	tmRNA links to Rfam database...	0.17	0.18	0.17	16	64166	88	15	64	9	75
TMR_00274	tmRNA links to Rfam database...	0.00	0.00	0.00	0	66795	0	0	0	0	105
TMR_00278	tmRNA links to Rfam database...	0.13	0.13	0.13	13	67794	97	12	77	8	89
TMR_00279	tmRNA links to Rfam database...	0.19	0.19	0.19	18	68911	85	14	63	8	76
TMR_00280	tmRNA links to Rfam database...	0.18	0.18	0.19	18	65970	88	10	68	10	83
TMR_00283	tmRNA links to Rfam database...	0.30	0.29	0.31	28	65250	70	4	59	7	68
TMR_00289	tmRNA links to Rfam database...	0.11	0.11	0.12	11	67066	92	2	82	8	87
TMR_00290	tmRNA links to Rfam database...	0.29	0.28	0.29	26	64172	63	18	45	0	66
TMR_00296	tmRNA links to Rfam database...	0.22	0.22	0.21	22	68903	91	13	68	10	76
TMR_00298	tmRNA links to Rfam database...	0.17	0.18	0.17	18	68160	94	7	80	7	83
TMR_00300	tmRNA links to Rfam database...	0.44	0.43	0.44	48	70392	69	8	52	9	64
TMR_00301	tmRNA links to Rfam database...	0.37	0.38	0.37	36	82117	71	14	48	9	60
TMR_00302	tmRNA links to Rfam database...	0.41	0.44	0.38	41	77313	77	18	49	10	53
TMR_00305	tmRNA links to Rfam database...	0.00	0.00	0.00	0	61075	0	0	0	0	102
TMR_00306	tmRNA links to Rfam database...	0.37	0.36	0.38	38	64160	68	5	58	5	68
TMR_00310	tmRNA links to Rfam database...	0.28	0.28	0.30	27	63812	73	10	54	9	71
TMR_00317	tmRNA links to Rfam database...	0.21	0.22	0.21	22	68160	85	10	73	2	80
TMR_00331	tmRNA links to Rfam database...	0.27	0.28	0.26	23	66708	75	17	47	11	59
TMR_00332	tmRNA links to Rfam database...	0.16	0.15	0.16	15	67068	83	6	72	5	84
TMR_00334	tmRNA links to Rfam database...	0.52	0.51	0.53	52	66696	51	11	36	4	49
TMR_00337	tmRNA links to Rfam database...	0.13	0.13	0.14	15	82920	99	14	79	6	104
TMR_00340	tmRNA links to Rfam database...	0.34	0.35	0.33	28	64176	70	14	43	13	53
TMR_00341	tmRNA links to Rfam database...	0.41	0.42	0.39	39	63090	65	19	42	4	53
TMR_00343	tmRNA links to Rfam database...	0.33	0.32	0.34	34	64879	75	4	63	8	71
TMR_00345	tmRNA links to Rfam database...	0.43	0.41	0.45	43	63807	62	11	42	9	61
TMR_00346	tmRNA links to Rfam database...	0.22	0.23	0.21	22	64157	86	14	68	4	72
TMR_00348	tmRNA links to Rfam database...	0.20	0.20	0.19	20	77318	100	19	64	17	79
TMR_00352	tmRNA links to Rfam database...	0.14	0.15	0.13	11	95179	103	14	62	27	64
TMR_00353	tmRNA links to Rfam database...	0.24	0.25	0.24	26	84148	99	17	64	18	79
TMR_00357	tmRNA links to Rfam database...	0.32	0.32	0.33	29	82939	78	15	45	18	63
TMR_00358	tmRNA links to Rfam database...	0.16	0.15	0.17	15	74990	90	11	62	17	84
TMR_00366	tmRNA links to Rfam database...	0.26	0.26	0.26	26	67796	80	13	61	6	74
TMR_00372	tmRNA links to Rfam database...	0.19	0.19	0.19	18	70404	88	13	65	10	78
TMR_00374	tmRNA links to Rfam database...	0.29	0.29	0.29	27	81716	83	9	58	16	65
TMR_00375	tmRNA links to Rfam database...	0.15	0.15	0.16	15	73440	89	13	68	8	83
TMR_00376	tmRNA links to Rfam database...	0.19	0.20	0.18	19	74586	97	12	74	11	76
TMR_00378	tmRNA links to Rfam database...	0.11	0.11	0.10	11	67790	100	15	80	5	86
TMR_00383	tmRNA links to Rfam database...	0.20	0.21	0.20	21	66689	90	5	80	5	79
TMR_00384	tmRNA links to Rfam database...	0.20	0.19	0.21	20	65607	80	11	65	4	88
TMR_00393	tmRNA links to Rfam database...	0.46	0.51	0.41	27	53235	71	15	24	32	26
TMR_00395	tmRNA links to Rfam database...	0.48	0.46	0.51	50	64521	54	1	48	5	59
TMR_00398	tmRNA links to Rfam database...	0.33	0.32	0.34	34	65242	70	7	58	5	72
TMR_00399	tmRNA links to Rfam database...	0.14	0.14	0.14	13	64884	86	17	66	3	81
TMR_00404	tmRNA links to Rfam database...	0.26	0.27	0.25	25	67428	83	15	60	8	67
TMR_00408	tmRNA links to Rfam database...	0.23	0.24	0.22	21	65969	86	17	59	10	67
TMR_00409	tmRNA links to Rfam database...	0.31	0.33	0.30	15	68585	93	7	28	58	31
TMR_00411	tmRNA links to Rfam database...	0.16	0.16	0.15	14	60984	82	14	63	5	73
TMR_00415	tmRNA links to Rfam database...	0.23	0.23	0.23	23	67059	79	18	61	0	78
TMR_00419	tmRNA links to Rfam database...	0.21	0.20	0.23	22	81713	90	13	62	15	89
TMR_00422	tmRNA links to Rfam database...	0.20	0.21	0.19	19	67795	92	15	67	10	73
TMR_00423	tmRNA links to Rfam database...	0.18	0.21	0.16	15	63808	88	28	52	8	58
TMR_00427	tmRNA links to Rfam database...	0.00	0.00	0.00	0	67528	0	0	0	0	97
TMR_00429	tmRNA links to Rfam database...	0.23	0.23	0.23	25	74584	85	15	67	3	84
TMR_00430	tmRNA links to Rfam database...	0.18	0.18	0.18	20	82511	93	14	76	3	89
TMR_00431	tmRNA links to Rfam database...	0.13	0.13	0.13	7	51951	83	8	37	38	48
TMR_00432	tmRNA links to Rfam database...	0.13	0.13	0.13	14	79689	105	18	79	8	90
TMR_00433	tmRNA links to Rfam database...	0.13	0.13	0.13	14	80095	98	13	78	7	92
TMR_00439	tmRNA links to Rfam database...	0.34	0.36	0.33	36	68527	76	26	46	4	65
TMR_00441	tmRNA links to Rfam database...	0.16	0.17	0.16	14	62042	89	14	58	17	69
TMR_00443	tmRNA links to Rfam database...	0.15	0.14	0.16	15	67066	84	8	72	4	89
TMR_00448	tmRNA links to Rfam database...	0.26	0.24	0.28	22	62049	65	4	53	8	70
TMR_00451	tmRNA links to Rfam database...	0.37	0.38	0.36	34	63451	65	16	45	4	55
TMR_00457	tmRNA links to Rfam database...	0.23	0.24	0.24	24	78504	85	28	50	7	78
TMR_00458	tmRNA links to Rfam database...	0.14	0.14	0.14	13	63451	89	13	69	7	80
TMR_00460	tmRNA links to Rfam database...	0.11	0.10	0.11	11	79300	96	17	73	6	95
TMR_00465	tmRNA links to Rfam database...	0.29	0.29	0.29	27	64169	70	13	52	5	67
TMR_00469	tmRNA links to Rfam database...	0.12	0.12	0.12	12	64521	92	8	79	5	88
TMR_00472	tmRNA links to Rfam database...	0.27	0.28	0.27	27	64520	80	4	69	7	70
TMR_00478	tmRNA links to Rfam database...	0.19	0.19	0.19	19	71909	88	13	69	6	80
TMR_00498	tmRNA links to Rfam database...	0.15	0.15	0.15	15	68904	94	20	67	7	84
TMR_00499	tmRNA links to Rfam database...	0.29	0.29	0.28	29	64517	81	8	66	7	70
TMR_00501	tmRNA links to Rfam database...	0.11	0.12	0.11	11	62383	92	19	68	5	81
TMR_00502	tmRNA links to Rfam database...	0.21	0.22	0.20	20	75366	90	17	63	10	73
TMR_00503	tmRNA links to Rfam database...	0.19	0.19	0.20	21	67792	90	3	80	7	90
TMR_00519	tmRNA links to Rfam database...	0.12	0.12	0.13	11	63107	82	11	61	10	84
TMR_00520	tmRNA links to Rfam database...	0.26	0.27	0.25	27	63084	79	13	66	0	72
TMR_00522	tmRNA links to Rfam database...	0.17	0.16	0.17	16	63096	83	17	61	5	81
TMR_00528	tmRNA links to Rfam database...	0.31	0.31	0.31	30	63092	73	16	52	5	67
TMR_00540	tmRNA links to Rfam database...	0.17	0.16	0.17	17	73438	89	10	71	8	87
TMR_00541	tmRNA links to Rfam database...	0.34	0.33	0.34	35	61673	74	11	57	6	70
TMR_00544	tmRNA links to Rfam database...	0.24	0.24	0.24	26	89568	92	22	60	10	82
TMR_00547	tmRNA links to Rfam database...	0.34	0.34	0.34	34	65240	73	9	58	6	66
TMR_00553	tmRNA links to Rfam database...	0.33	0.33	0.33	27	48122	62	8	48	6	54
TMR_00559	tmRNA links to Rfam database...	0.17	0.18	0.17	18	62376	91	13	74	4	83
TMR_00560	tmRNA links to Rfam database...	0.24	0.24	0.24	24	60976	79	12	63	4	74
TMR_00562	tmRNA links to Rfam database...	0.22	0.24	0.22	24	72660	92	10	77	5	78
TMR_00563	tmRNA links to Rfam database...	0.26	0.26	0.25	27	75360	86	12	67	7	76
TMR_00566	tmRNA links to Rfam database...	0.30	0.29	0.31	29	60632	69	9	56	4	71
TMR_00568	tmRNA links to Rfam database...	0.16	0.15	0.17	15	60636	81	3	72	6	84
TMR_00570	tmRNA links to Rfam database...	0.25	0.26	0.25	25	60276	83	12	65	6	72
TMR_00571	tmRNA links to Rfam database...	0.00	0.00	0.00	0	60726	0	0	0	0	99
TMR_00576	tmRNA links to Rfam database...	0.21	0.21	0.21	21	60278	86	11	68	7	81
TMR_00579	tmRNA links to Rfam database...	0.22	0.24	0.20	22	80492	95	24	63	8	68
TMR_00580	tmRNA links to Rfam database...	0.23	0.23	0.24	23	60629	80	8	66	6	77
TMR_00581	tmRNA links to Rfam database...	0.20	0.20	0.19	20	62378	88	10	73	5	78
TMR_00584	tmRNA links to Rfam database...	0.18	0.19	0.18	18	60977	85	11	69	5	79
TMR_00586	tmRNA links to Rfam database...	0.16	0.15	0.16	15	60984	85	11	65	9	82
TMR_00587	tmRNA links to Rfam database...	0.31	0.30	0.31	30	61329	67	6	60	1	70
TMR_00588	tmRNA links to Rfam database...	0.38	0.41	0.36	41	77307	78	24	49	5	60
TMR_00594	tmRNA links to Rfam database...	0.43	0.45	0.41	47	79286	72	18	50	4	57
TMR_00596	tmRNA links to Rfam database...	0.35	0.37	0.33	35	78105	82	17	53	12	60
TMR_00599	tmRNA links to Rfam database...	0.24	0.28	0.22	20	63097	82	22	51	9	52
TMR_00600	tmRNA links to Rfam database...	0.18	0.18	0.18	21	79686	93	15	78	0	94
TMR_00601	tmRNA links to Rfam database...	0.26	0.26	0.26	11	58953	79	6	26	47	31
TMR_00603	tmRNA links to Rfam database...	0.35	0.33	0.37	14	60340	69	4	20	45	29
TMR_00604	tmRNA links to Rfam database...	0.44	0.43	0.44	48	62727	60	11	49	0	64
TMR_00605	tmRNA links to Rfam database...	0.47	0.48	0.46	52	74193	64	20	40	4	56
TMR_00606	tmRNA links to Rfam database...	0.51	0.52	0.49	56	68892	63	18	40	5	51
TMR_00609	tmRNA links to Rfam database...	0.28	0.27	0.30	31	63442	78	4	69	5	82
TMR_00610	tmRNA links to Rfam database...	0.38	0.37	0.40	38	62034	67	4	52	11	66
TMR_00611	tmRNA links to Rfam database...	0.53	0.55	0.51	56	61315	57	11	43	3	46
TMR_00612	tmRNA links to Rfam database...	0.38	0.38	0.38	39	60623	68	10	54	4	65
TMR_00614	tmRNA links to Rfam database...	0.51	0.51	0.51	53	60972	56	6	44	6	51
TMR_00615	tmRNA links to Rfam database...	0.32	0.33	0.30	32	63798	78	17	56	5	64
TMR_00616	tmRNA links to Rfam database...	0.32	0.31	0.32	31	67064	72	11	55	6	68
TMR_00617	tmRNA links to Rfam database...	0.08	0.09	0.07	5	34643	73	14	54	5	53
TMR_00623	tmRNA links to Rfam database...	0.01	0.01	0.01	1	61332	94	8	84	2	107
TMR_00624	tmRNA links to Rfam database...	0.22	0.22	0.23	24	62375	86	10	72	4	84
TMR_00625	tmRNA links to Rfam database...	0.45	0.47	0.44	50	78889	70	23	41	6	56
TMR_00626	tmRNA links to Rfam database...	0.38	0.39	0.39	42	67787	69	16	51	2	67
TMR_00680	tmRNA links to Rfam database...	0.44	0.45	0.42	45	67789	70	10	52	8	54
TMR_00681	tmRNA links to Rfam database...	0.25	0.25	0.25	24	65971	79	7	64	8	73
TMR_00683	tmRNA links to Rfam database...	0.14	0.15	0.14	15	82921	101	20	72	9	85
TMR_00686	tmRNA links to Rfam database...	0.23	0.23	0.23	25	71145	88	9	74	5	83
TMR_00687	tmRNA links to Rfam database...	0.38	0.39	0.38	43	71517	74	10	61	3	68
TMR_00696	tmRNA links to Rfam database...	0.10	0.10	0.11	11	84975	107	3	89	15	103
TMR_00698	tmRNA links to Rfam database...	0.37	0.38	0.36	39	63082	69	16	53	0	65
TMR_00699	tmRNA links to Rfam database...	0.28	0.28	0.27	29	67054	82	14	64	4	73
TMR_00702	tmRNA links to Rfam database...	0.26	0.25	0.28	25	67072	71	8	56	7	75
TMR_00703	tmRNA links to Rfam database...	0.33	0.31	0.34	31	67437	67	7	53	7	68
TMR_00706	tmRNA links to Rfam database...	0.23	0.21	0.26	22	66344	68	10	54	4	81
TMR_00711	tmRNA links to Rfam database...	0.20	0.21	0.20	21	67789	88	22	64	2	77
TMR_00712	tmRNA links to Rfam database...	0.09	0.09	0.09	10	78492	107	14	90	3	99
TMR_00716	tmRNA links to Rfam database...	0.14	0.15	0.14	15	62729	98	14	77	7	85

^top

Matthews Correlation Coeffient, Sensitivity and Positive Predictive Value have been calculated based on the paper by Gardener & Giegerich, 2004.

Table of contents:

Overview

Performance plots

Performance of McQFold - scored higher in this pairwise comparison

1. Total counts & total scores for McQFold

2. Individual counts for McQFold [ download as .csv ]

Performance of Vsfold5 - scored lower in this pairwise comparison

1. Total counts & total scores for Vsfold5

2. Individual counts for Vsfold5 [ download as .csv ]