CompaRNA - on-line benchmarks of RNA structure prediction methods

Laboratory of Structural Bioinformatics @ Adam Mickiewicz University in Poznan

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Overview

Metric	RNAwolf		Vsfold4
MCC	0.339	>	0.337
Average MCC ± 95% Confidence Intervals	0.342 ± 0.013	<	0.346 ± 0.013
Sensitivity	0.354	>	0.310
Positive Predictive Value	0.328	<	0.368
Total TP	19675	>	17237
Total TN	34136998	<	34150186
Total FP	46723	>	32510
Total FP CONTRA	7349	>	4018
Total FP INCONS	33036	>	25617
Total FP COMP	6338	>	2875
Total FN	35929	<	38367
P-value	8.67590017402e-07

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Performance plots

Comparison of performance of RNAwolf and Vsfold4. Positive Predictive Value (PPV) is plotted against sensitivity. Each dot represents a single test of each method. See tables below for raw data (individual counts for RNAwolf and Vsfold4).
Average Matthews Correlation Coefficients (MCC) with 95% confidence intervals (CIs) were plotted for different RNA families, for which at least 3 members were present in the benchmarking dataset. 'n' denotes the number of MCCs used to calculate the average and CI. See tables below for raw data (individual counts for RNAwolf and Vsfold4).
Comparison of average Matthews Correlation Coefficients (MCCs) for RNAwolf and Vsfold4. The whiskers correspond to 95% confidence intervals (CIs). 'n' denotes the number of MCCs used to calculate average MCCs and CIs. See tables below for raw data (individual counts for RNAwolf and Vsfold4).

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Performance of RNAwolf - scored higher in this pairwise comparison

1. Total counts & total scores for RNAwolf

Total Base Pair Counts
Total TP	19675
Total TN	34136998
Total FP	46723
Total FP CONTRA	7349
Total FP INCONS	33036
Total FP COMP	6338
Total FN	35929

Total Scores
MCC	0.339
Average MCC ± 95% Confidence Intervals	0.342 ± 0.013
Sensitivity	0.354
Positive Predictive Value	0.328
Nr of predictions	600

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2. Individual counts for RNAwolf [ download as .csv ]

RNA Chain	Rfam family	MCC	SENS	PPV	TP	TN	FP	FP CONTRA	FP INCONS	FP COMP	FN
ASE_00001	RNaseP_arch links to Rfam database...	0.76	0.73	0.80	55	34122	33	1	13	19	20
ASE_00002	RNaseP_arch links to Rfam database...	0.56	0.53	0.58	39	35444	45	2	26	17	34
ASE_00004	RNaseP_bact_a links to Rfam database...	0.51	0.51	0.51	49	47799	61	8	39	14	48
ASE_00005	RNaseP_bact_a links to Rfam database...	0.46	0.46	0.47	54	57854	68	12	50	6	63
ASE_00006	RNaseP_bact_a links to Rfam database...	0.32	0.33	0.30	31	47484	83	10	61	12	62
ASE_00007	RNaseP_bact_a links to Rfam database...	0.30	0.30	0.31	33	59577	81	11	64	6	77
ASE_00009	RNaseP_arch links to Rfam database...	0.39	0.39	0.40	26	26041	48	4	35	9	41
ASE_00012	RNaseP_bact_a links to Rfam database...	0.54	0.54	0.54	67	73797	68	5	51	12	56
ASE_00014	RNaseP_arch links to Rfam database...	0.36	0.38	0.35	40	54171	80	16	58	6	66
ASE_00017	RNaseP_nuc links to Rfam database...	0.11	0.13	0.10	8	50962	92	14	56	22	56
ASE_00018	RNaseP_bact_a links to Rfam database...	0.53	0.54	0.53	72	80465	72	4	60	8	62
ASE_00020	RNaseP_bact_a links to Rfam database...	0.63	0.62	0.64	78	73799	56	6	37	13	48
ASE_00022	RNaseP_bact_b links to Rfam database...	0.45	0.45	0.44	56	82901	79	9	62	8	68
ASE_00023	RNaseP_bact_a links to Rfam database...	0.48	0.50	0.46	63	84117	87	12	63	12	64
ASE_00025	RNaseP_nuc links to Rfam database...	0.26	0.30	0.24	21	78517	111	23	45	43	50
ASE_00026	RNaseP_bact_a links to Rfam database...	0.41	0.42	0.41	46	59573	75	6	60	9	64
ASE_00028	RNaseP_bact_b links to Rfam database...	0.46	0.47	0.45	59	84536	90	9	62	19	67
ASE_00029	RNaseP_bact_a links to Rfam database...	0.27	0.29	0.26	35	82894	112	15	84	13	87
ASE_00030	RNaseP_bact_a links to Rfam database...	0.49	0.46	0.52	67	85361	72	6	57	9	78
ASE_00031	RNaseP_bact_a links to Rfam database...	0.46	0.46	0.46	58	86609	81	8	61	12	68
ASE_00032	RNaseP_bact_a links to Rfam database...	0.32	0.31	0.33	37	80087	93	2	74	17	81
ASE_00033	RNaseP_bact_a links to Rfam database...	0.11	0.12	0.11	14	64857	111	8	101	2	107
ASE_00035	RNaseP_bact_a links to Rfam database...	0.22	0.23	0.22	27	70375	102	22	76	4	91
ASE_00036	RNaseP_bact_a links to Rfam database...	0.42	0.42	0.43	55	75728	79	4	68	7	77
ASE_00037	RNaseP_bact_a links to Rfam database...	0.36	0.35	0.39	38	59242	67	8	52	7	72
ASE_00038	RNaseP_bact_a links to Rfam database...	0.41	0.41	0.41	41	53529	66	7	51	8	60
ASE_00040	RNaseP_bact_a links to Rfam database...	0.31	0.32	0.30	43	78860	110	16	84	10	90
ASE_00041	RNaseP_bact_a links to Rfam database...	0.37	0.36	0.39	39	57530	71	7	54	10	69
ASE_00042	RNaseP_bact_a links to Rfam database...	0.31	0.31	0.31	45	89957	109	9	89	11	100
ASE_00044	RNaseP_bact_a links to Rfam database...	0.48	0.48	0.48	50	54511	71	5	49	17	55
ASE_00046	RNaseP_bact_a links to Rfam database...	0.21	0.21	0.22	22	50301	81	6	74	1	81
ASE_00047	RNaseP_bact_a links to Rfam database...	0.12	0.12	0.12	15	74178	121	5	107	9	115
ASE_00052	RNaseP_bact_a links to Rfam database...	0.17	0.17	0.17	19	61315	94	14	77	3	93
ASE_00053	RNaseP_bact_a links to Rfam database...	0.44	0.44	0.44	58	79269	85	12	62	11	75
ASE_00056	-	0.41	0.40	0.43	29	30808	57	6	33	18	43
ASE_00057	RNaseP_bact_a links to Rfam database...	0.53	0.53	0.54	71	82083	73	6	55	12	63
ASE_00064	RNaseP_bact_a links to Rfam database...	0.19	0.19	0.19	17	45361	82	13	60	9	72
ASE_00066	RNaseP_bact_a links to Rfam database...	0.50	0.51	0.49	66	72254	74	7	63	4	64
ASE_00068	RNaseP_bact_a links to Rfam database...	0.38	0.38	0.38	32	37591	57	8	44	5	53
ASE_00069	RNaseP_bact_a links to Rfam database...	0.57	0.56	0.58	78	82893	67	8	49	10	62
ASE_00074	RNaseP_bact_a links to Rfam database...	0.36	0.36	0.37	43	67779	81	9	65	7	76
ASE_00076	RNaseP_bact_a links to Rfam database...	0.43	0.43	0.44	51	68148	77	10	56	11	67
ASE_00077	RNaseP_bact_a links to Rfam database...	0.36	0.37	0.35	32	45059	70	15	44	11	54
ASE_00078	RNaseP_bact_a links to Rfam database...	0.28	0.29	0.27	24	42983	71	8	56	7	59
ASE_00079	RNaseP_bact_a links to Rfam database...	0.47	0.47	0.48	47	55513	64	7	44	13	53
ASE_00080	RNaseP_bact_a links to Rfam database...	0.36	0.37	0.36	45	71507	88	5	74	9	78
ASE_00081	RNaseP_bact_a links to Rfam database...	0.21	0.22	0.21	21	49668	87	9	72	6	76
ASE_00082	RNaseP_bact_a links to Rfam database...	0.44	0.46	0.43	53	70377	86	8	62	16	63
ASE_00083	RNaseP_bact_a links to Rfam database...	0.29	0.29	0.28	32	62368	94	11	70	13	78
ASE_00084	RNaseP_bact_a links to Rfam database...	0.59	0.61	0.57	60	53523	55	7	38	10	39
ASE_00087	RNaseP_bact_a links to Rfam database...	0.29	0.28	0.31	41	88276	102	8	85	9	103
ASE_00089	-	0.46	0.47	0.45	37	31293	54	3	42	9	42
ASE_00090	RNaseP_bact_a links to Rfam database...	0.32	0.33	0.31	33	55504	91	4	70	17	68
ASE_00092	RNaseP_bact_a links to Rfam database...	0.51	0.52	0.50	59	63428	75	11	48	16	54
ASE_00096	RNaseP_bact_a links to Rfam database...	0.62	0.64	0.60	74	63422	58	13	37	8	41
ASE_00099	RNaseP_bact_a links to Rfam database...	0.56	0.55	0.56	66	64503	67	3	48	16	54
ASE_00100	RNaseP_nuc links to Rfam database...	0.22	0.24	0.20	18	82127	121	13	57	51	58
ASE_00104	RNaseP_bact_a links to Rfam database...	0.40	0.39	0.41	46	64148	80	2	65	13	73
ASE_00105	RNaseP_bact_a links to Rfam database...	0.57	0.57	0.57	63	64151	57	10	37	10	48
ASE_00107	RNaseP_bact_a links to Rfam database...	0.51	0.53	0.50	67	73020	74	9	57	8	60
ASE_00108	RNaseP_nuc links to Rfam database...	0.19	0.22	0.16	14	46885	92	14	58	20	49
ASE_00111	RNaseP_nuc links to Rfam database...	0.20	0.25	0.17	14	50002	85	25	45	15	43
ASE_00112	RNaseP_bact_a links to Rfam database...	0.55	0.56	0.53	65	75344	66	4	53	9	51
ASE_00115	RNaseP_bact_a links to Rfam database...	0.28	0.29	0.28	29	54512	85	6	68	11	72
ASE_00116	RNaseP_arch links to Rfam database...	0.05	0.06	0.05	4	31549	79	14	59	6	62
ASE_00118	RNaseP_bact_a links to Rfam database...	0.28	0.30	0.26	31	60607	93	9	79	5	71
ASE_00119	RNaseP_bact_a links to Rfam database...	0.52	0.53	0.50	57	62722	71	10	46	15	51
ASE_00120	RNaseP_arch links to Rfam database...	0.20	0.20	0.20	19	46877	79	15	60	4	75
ASE_00121	RNaseP_arch links to Rfam database...	0.15	0.15	0.14	14	45052	88	10	74	4	78
ASE_00122	RNaseP_bact_a links to Rfam database...	0.36	0.36	0.35	32	43274	62	12	47	3	56
ASE_00123	RNaseP_bact_a links to Rfam database...	0.46	0.48	0.45	41	38412	58	9	41	8	44
ASE_00125	RNaseP_bact_a links to Rfam database...	0.48	0.48	0.48	42	39252	53	12	34	7	46
ASE_00126	RNaseP_bact_a links to Rfam database...	0.43	0.44	0.42	36	40385	59	9	40	10	46
ASE_00128	RNaseP_bact_a links to Rfam database...	0.45	0.46	0.43	46	53195	70	6	54	10	54
ASE_00129	RNaseP_bact_a links to Rfam database...	0.34	0.35	0.33	39	62716	87	8	72	7	72
ASE_00131	RNaseP_bact_a links to Rfam database...	0.47	0.46	0.48	39	39258	54	10	33	11	46
ASE_00132	RNaseP_bact_a links to Rfam database...	0.42	0.43	0.42	41	50305	63	13	44	6	54
ASE_00134	RNaseP_bact_a links to Rfam database...	0.49	0.49	0.48	47	50305	59	8	43	8	48
ASE_00135	RNaseP_bact_a links to Rfam database...	0.45	0.46	0.45	50	63078	74	12	50	12	59
ASE_00136	RNaseP_bact_a links to Rfam database...	0.27	0.27	0.27	25	48112	84	4	64	16	67
ASE_00137	RNaseP_bact_a links to Rfam database...	0.47	0.49	0.45	48	48410	75	3	55	17	50
ASE_00138	RNaseP_bact_a links to Rfam database...	0.54	0.56	0.54	45	40386	55	6	33	16	36
ASE_00139	RNaseP_bact_a links to Rfam database...	0.56	0.55	0.57	57	54185	52	7	36	9	47
ASE_00140	RNaseP_bact_a links to Rfam database...	0.51	0.50	0.52	62	70757	67	7	50	10	63
ASE_00142	RNaseP_bact_a links to Rfam database...	0.28	0.28	0.27	34	67037	95	13	77	5	88
ASE_00145	RNaseP_arch links to Rfam database...	0.24	0.25	0.24	28	70006	101	8	83	10	83
ASE_00146	RNaseP_bact_a links to Rfam database...	0.42	0.43	0.42	53	70749	81	12	62	7	71
ASE_00151	RNaseP_bact_a links to Rfam database...	0.62	0.61	0.63	60	51908	47	9	26	12	38
ASE_00153	RNaseP_nuc links to Rfam database...	0.33	0.38	0.29	28	57534	96	15	53	28	45
ASE_00154	RNaseP_arch links to Rfam database...	0.42	0.42	0.43	45	65236	73	8	52	13	62
ASE_00155	RNaseP_arch links to Rfam database...	0.41	0.42	0.41	59	93384	92	4	81	7	83
ASE_00163	RNaseP_bact_a links to Rfam database...	0.40	0.40	0.40	37	53208	82	0	56	26	56
ASE_00165	RNaseP_bact_a links to Rfam database...	0.17	0.18	0.17	18	52870	93	10	77	6	83
ASE_00168	RNaseP_nuc links to Rfam database...	0.08	0.09	0.07	6	60637	105	22	61	22	58
ASE_00169	RNaseP_bact_a links to Rfam database...	0.51	0.50	0.51	54	57185	70	5	47	18	53
ASE_00170	RNaseP_bact_a links to Rfam database...	0.35	0.37	0.34	34	48728	76	9	57	10	59
ASE_00171	RNaseP_bact_a links to Rfam database...	0.57	0.60	0.55	56	48414	56	8	38	10	38
ASE_00172	RNaseP_bact_a links to Rfam database...	0.39	0.41	0.37	43	58880	80	9	64	7	63
ASE_00174	RNaseP_bact_a links to Rfam database...	0.48	0.50	0.47	55	60957	77	11	52	14	54
ASE_00175	RNaseP_bact_a links to Rfam database...	0.55	0.56	0.54	60	59919	62	10	42	10	47
ASE_00176	RNaseP_bact_a links to Rfam database...	0.41	0.43	0.41	47	59915	80	7	62	11	63
ASE_00179	RNaseP_bact_a links to Rfam database...	0.26	0.27	0.25	23	44162	79	13	55	11	61
ASE_00180	RNaseP_bact_a links to Rfam database...	0.43	0.43	0.43	43	51259	71	7	51	13	57
ASE_00181	RNaseP_bact_a links to Rfam database...	0.39	0.41	0.37	43	57514	78	9	64	5	63
ASE_00182	RNaseP_bact_a links to Rfam database...	0.43	0.43	0.44	58	84123	86	5	69	12	78
ASE_00183	RNaseP_bact_a links to Rfam database...	0.45	0.44	0.46	50	61316	71	8	51	12	63
ASE_00184	RNaseP_bact_a links to Rfam database...	0.44	0.46	0.42	47	54504	69	11	53	5	55
ASE_00185	RNaseP_bact_a links to Rfam database...	0.49	0.49	0.49	63	73407	73	10	56	7	65
ASE_00186	RNaseP_bact_a links to Rfam database...	0.43	0.42	0.44	55	78877	87	9	62	16	77
ASE_00187	RNaseP_arch links to Rfam database...	0.28	0.29	0.28	33	68517	96	13	72	11	82
ASE_00189	RNaseP_bact_b links to Rfam database...	0.34	0.35	0.34	36	63083	78	14	57	7	66
ASE_00190	RNaseP_bact_b links to Rfam database...	0.56	0.54	0.57	49	45365	50	1	36	13	41
ASE_00192	RNaseP_bact_b links to Rfam database...	0.51	0.51	0.51	68	84533	73	9	56	8	65
ASE_00194	RNaseP_bact_b links to Rfam database...	0.41	0.41	0.42	49	73419	79	4	64	11	70
ASE_00195	-	0.41	0.42	0.39	56	86177	97	17	70	10	77
ASE_00196	RNaseP_arch links to Rfam database...	0.57	0.59	0.55	44	31546	50	4	32	14	31
ASE_00197	RNaseP_bact_a links to Rfam database...	0.31	0.32	0.31	46	89104	114	10	93	11	99
ASE_00198	RNaseP_bact_a links to Rfam database...	0.28	0.27	0.28	28	52551	76	7	64	5	74
ASE_00203	RNaseP_bact_a links to Rfam database...	0.54	0.55	0.52	53	46564	58	10	38	10	43
ASE_00204	RNaseP_bact_b links to Rfam database...	0.51	0.53	0.49	59	67775	70	12	50	8	53
ASE_00205	RNaseP_arch links to Rfam database...	0.17	0.19	0.16	17	45949	90	17	73	0	73
ASE_00209	RNaseP_arch links to Rfam database...	0.30	0.30	0.31	26	42988	63	8	49	6	62
ASE_00210	RNaseP_arch links to Rfam database...	0.62	0.63	0.61	41	27194	39	9	17	13	24
ASE_00212	RNaseP_bact_a links to Rfam database...	0.29	0.29	0.28	43	93810	117	10	98	9	105
ASE_00213	RNaseP_arch links to Rfam database...	0.68	0.65	0.70	43	27200	31	6	12	13	23
ASE_00214	RNaseP_bact_a links to Rfam database...	0.44	0.46	0.43	47	56171	76	2	60	14	56
ASE_00215	RNaseP_bact_a links to Rfam database...	0.28	0.28	0.29	28	48418	83	6	64	13	71
ASE_00216	RNaseP_bact_a links to Rfam database...	0.25	0.26	0.25	21	39255	67	8	56	3	61
ASE_00217	RNaseP_bact_a links to Rfam database...	0.34	0.33	0.35	30	40385	63	5	50	8	60
ASE_00221	RNaseP_bact_a links to Rfam database...	0.36	0.37	0.35	43	64496	87	11	70	6	74
ASE_00227	RNaseP_bact_a links to Rfam database...	0.21	0.20	0.21	27	78875	107	6	95	6	106
ASE_00228	RNaseP_bact_a links to Rfam database...	0.36	0.40	0.32	34	46866	76	20	51	5	52
ASE_00229	RNaseP_bact_a links to Rfam database...	0.09	0.10	0.09	9	42384	101	6	87	8	78
ASE_00231	RNaseP_bact_a links to Rfam database...	0.56	0.58	0.53	56	47790	61	8	41	12	40
ASE_00232	RNaseP_bact_a links to Rfam database...	0.37	0.39	0.36	33	38411	70	4	55	11	51
ASE_00234	RNaseP_bact_a links to Rfam database...	0.54	0.54	0.55	70	75338	70	8	50	12	59
ASE_00237	RNaseP_nuc links to Rfam database...	0.00	0.00	0.00	0	45662	110	30	61	19	56
ASE_00238	RNaseP_bact_a links to Rfam database...	0.56	0.57	0.56	65	64144	64	10	42	12	49
ASE_00240	RNaseP_bact_a links to Rfam database...	0.31	0.31	0.32	29	46573	73	9	54	10	64
ASE_00241	RNaseP_bact_a links to Rfam database...	0.62	0.64	0.59	56	43861	48	6	33	9	31
ASE_00242	RNaseP_bact_a links to Rfam database...	0.42	0.41	0.44	46	60970	62	14	45	3	66
ASE_00246	RNaseP_nuc links to Rfam database...	0.07	0.07	0.06	5	48121	94	25	54	15	62
ASE_00247	RNaseP_nuc links to Rfam database...	0.10	0.13	0.08	8	54188	105	25	64	16	56
ASE_00248	RNaseP_bact_a links to Rfam database...	0.32	0.31	0.33	35	62376	75	7	63	5	79
ASE_00250	RNaseP_bact_a links to Rfam database...	0.37	0.36	0.38	47	78880	83	10	66	7	84
ASE_00254	RNaseP_bact_a links to Rfam database...	0.36	0.39	0.34	32	36761	69	10	53	6	50
ASE_00255	RNaseP_bact_a links to Rfam database...	0.46	0.47	0.45	61	74555	83	9	66	8	69
ASE_00257	RNaseP_bact_a links to Rfam database...	0.56	0.57	0.56	55	50941	56	9	35	12	42
ASE_00259	RNaseP_bact_a links to Rfam database...	0.35	0.35	0.36	42	73037	85	9	65	11	79
ASE_00263	RNaseP_bact_a links to Rfam database...	0.15	0.16	0.15	19	70373	111	9	99	3	101
ASE_00264	RNaseP_nuc links to Rfam database...	0.43	0.44	0.43	44	49038	69	6	53	10	56
ASE_00267	RNaseP_bact_a links to Rfam database...	0.36	0.35	0.37	31	45067	62	8	44	10	57
ASE_00270	RNaseP_bact_a links to Rfam database...	0.51	0.50	0.52	64	72268	71	4	54	13	64
ASE_00274	RNaseP_bact_a links to Rfam database...	0.30	0.29	0.30	30	55512	78	13	56	9	73
ASE_00277	RNaseP_bact_a links to Rfam database...	0.28	0.30	0.26	27	48103	84	14	61	9	64
ASE_00279	RNaseP_bact_a links to Rfam database...	0.29	0.29	0.29	29	53202	80	4	66	10	72
ASE_00280	RNaseP_bact_a links to Rfam database...	0.20	0.20	0.20	20	51905	85	5	73	7	78
ASE_00281	RNaseP_bact_a links to Rfam database...	0.33	0.34	0.32	30	44458	73	11	52	10	58
ASE_00282	RNaseP_bact_a links to Rfam database...	0.23	0.24	0.24	30	77688	105	10	87	8	97
ASE_00283	RNaseP_bact_a links to Rfam database...	0.46	0.48	0.45	51	61662	74	12	51	11	56
ASE_00284	RNaseP_bact_a links to Rfam database...	0.08	0.08	0.08	9	58197	111	9	96	6	99
ASE_00285	RNaseP_bact_a links to Rfam database...	0.27	0.28	0.27	34	68878	102	9	85	8	88
ASE_00286	RNaseP_bact_a links to Rfam database...	0.57	0.54	0.61	50	46583	42	6	26	10	42
ASE_00287	RNaseP_bact_a links to Rfam database...	0.30	0.30	0.30	31	54842	81	6	67	8	72
ASE_00288	RNaseP_bact_a links to Rfam database...	0.27	0.27	0.28	25	45967	68	12	52	4	68
ASE_00291	-	0.39	0.40	0.38	38	48415	73	7	56	10	56
ASE_00292	RNaseP_bact_a links to Rfam database...	0.38	0.38	0.39	52	81676	93	8	74	11	86
ASE_00295	RNaseP_bact_a links to Rfam database...	0.49	0.49	0.50	64	73792	73	10	54	9	67
ASE_00296	RNaseP_bact_a links to Rfam database...	0.31	0.30	0.32	44	91669	101	7	86	8	101
ASE_00297	RNaseP_bact_a links to Rfam database...	0.41	0.42	0.40	41	52873	73	4	57	12	57
ASE_00298	RNaseP_bact_a links to Rfam database...	0.29	0.29	0.30	33	67418	86	8	69	9	80
ASE_00299	RNaseP_bact_a links to Rfam database...	0.45	0.47	0.43	47	49346	69	6	56	7	53
ASE_00313	RNaseP_nuc links to Rfam database...	0.11	0.11	0.11	10	62387	106	11	73	22	79
ASE_00318	RNaseP_bact_b links to Rfam database...	0.41	0.42	0.40	49	80077	79	13	61	5	69
ASE_00327	RNaseP_nuc links to Rfam database...	0.44	0.48	0.40	43	57184	75	21	43	11	46
ASE_00328	RNaseP_bact_b links to Rfam database...	0.51	0.49	0.53	55	72667	61	5	44	12	57
ASE_00330	RNaseP_nuc links to Rfam database...	0.40	0.42	0.38	38	56181	78	12	49	17	52
ASE_00332	RNaseP_bact_a links to Rfam database...	0.23	0.23	0.24	32	81674	118	5	99	14	106
ASE_00335	RNaseP_bact_b links to Rfam database...	0.58	0.57	0.58	66	75353	65	5	42	18	50
ASE_00337	RNaseP_nuc links to Rfam database...	0.45	0.44	0.47	31	39274	59	1	34	24	40
ASE_00338	RNaseP_nuc links to Rfam database...	0.35	0.37	0.34	36	66323	87	14	57	16	62
ASE_00339	RNaseP_bact_a links to Rfam database...	0.51	0.52	0.50	62	80077	77	3	58	16	57
ASE_00340	RNaseP_bact_a links to Rfam database...	0.14	0.15	0.14	13	45963	87	8	72	7	72
ASE_00342	RNaseP_bact_a links to Rfam database...	0.50	0.50	0.50	58	62365	70	9	49	12	57
ASE_00343	RNaseP_bact_a links to Rfam database...	0.51	0.50	0.53	56	83331	75	2	47	26	57
ASE_00346	RNaseP_arch links to Rfam database...	0.26	0.26	0.27	25	48112	83	9	59	15	72
ASE_00353	RNaseP_bact_a links to Rfam database...	0.19	0.21	0.19	22	57852	106	9	87	10	85
ASE_00359	RNaseP_arch links to Rfam database...	0.16	0.18	0.15	14	42682	87	15	67	5	66
ASE_00360	RNaseP_arch links to Rfam database...	0.25	0.28	0.23	18	29326	62	10	49	3	47
ASE_00361	RNaseP_bact_a links to Rfam database...	0.36	0.37	0.35	47	75333	94	11	75	8	80
ASE_00362	RNaseP_bact_a links to Rfam database...	0.43	0.44	0.42	40	48110	66	10	45	11	51
ASE_00363	RNaseP_bact_a links to Rfam database...	0.29	0.31	0.27	29	51254	81	12	65	4	65
ASE_00364	RNaseP_bact_a links to Rfam database...	0.38	0.39	0.38	41	54177	77	9	58	10	64
ASE_00366	RNaseP_bact_a links to Rfam database...	0.19	0.20	0.17	20	58538	98	14	81	3	78
ASE_00367	RNaseP_bact_a links to Rfam database...	0.26	0.27	0.25	23	42978	79	8	62	9	63
ASE_00369	RNaseP_bact_a links to Rfam database...	0.34	0.36	0.33	38	55831	88	3	73	12	69
ASE_00370	RNaseP_bact_a links to Rfam database...	0.29	0.30	0.28	25	41816	75	7	57	11	59
ASE_00372	RNaseP_bact_a links to Rfam database...	0.21	0.22	0.21	22	51897	88	11	73	4	78
ASE_00374	RNaseP_bact_a links to Rfam database...	0.48	0.48	0.48	42	44763	54	2	43	9	46
ASE_00375	RNaseP_bact_a links to Rfam database...	0.34	0.32	0.37	35	60284	67	9	50	8	75
ASE_00376	RNaseP_bact_a links to Rfam database...	0.45	0.46	0.44	48	56843	71	4	58	9	57
ASE_00377	RNaseP_bact_a links to Rfam database...	0.65	0.65	0.64	70	57521	52	8	31	13	37
ASE_00379	RNaseP_bact_a links to Rfam database...	0.25	0.26	0.25	23	45964	77	10	59	8	66
ASE_00380	RNaseP_bact_a links to Rfam database...	0.28	0.28	0.29	28	54848	82	7	63	12	71
ASE_00382	RNaseP_bact_a links to Rfam database...	0.36	0.37	0.35	31	41816	69	12	46	11	53
ASE_00383	RNaseP_bact_a links to Rfam database...	0.44	0.43	0.45	45	54514	70	4	52	14	60
ASE_00384	RNaseP_bact_a links to Rfam database...	0.27	0.28	0.27	26	48418	84	10	62	12	66
ASE_00385	RNaseP_bact_a links to Rfam database...	0.52	0.52	0.53	42	41825	54	7	31	16	39
ASE_00386	RNaseP_bact_a links to Rfam database...	0.39	0.40	0.38	38	50303	74	6	56	12	58
ASE_00387	RNaseP_bact_a links to Rfam database...	0.47	0.47	0.47	49	55841	66	8	47	11	55
ASE_00388	RNaseP_bact_a links to Rfam database...	0.29	0.30	0.28	27	45657	84	7	62	15	62
ASE_00390	RNaseP_bact_a links to Rfam database...	0.38	0.40	0.36	34	42100	71	9	52	10	51
ASE_00393	RNaseP_bact_a links to Rfam database...	0.27	0.28	0.27	26	47798	77	6	65	6	67
ASE_00394	RNaseP_bact_a links to Rfam database...	0.29	0.29	0.30	27	46881	73	6	57	10	66
ASE_00395	RNaseP_bact_a links to Rfam database...	0.54	0.56	0.52	47	41526	54	12	31	11	37
ASE_00396	RNaseP_bact_a links to Rfam database...	0.28	0.30	0.27	25	41522	78	11	58	9	58
ASE_00397	RNaseP_bact_a links to Rfam database...	0.43	0.43	0.42	45	54509	75	7	54	14	60
ASE_00398	RNaseP_bact_a links to Rfam database...	0.35	0.36	0.35	37	55839	79	6	63	10	67
ASE_00400	RNaseP_bact_a links to Rfam database...	0.63	0.64	0.62	68	57860	54	9	33	12	38
ASE_00401	RNaseP_bact_a links to Rfam database...	0.39	0.40	0.38	51	76893	91	12	72	7	75
ASE_00402	RNaseP_bact_a links to Rfam database...	0.44	0.45	0.44	38	42400	59	7	41	11	47
ASE_00403	RNaseP_bact_a links to Rfam database...	0.24	0.23	0.24	25	55841	94	8	71	15	82
ASE_00404	RNaseP_bact_a links to Rfam database...	0.25	0.28	0.23	24	42967	83	16	64	3	61
ASE_00406	RNaseP_bact_a links to Rfam database...	0.33	0.32	0.34	30	48740	71	5	53	13	64
ASE_00408	-	0.32	0.32	0.32	23	32312	59	6	44	9	48
ASE_00409	-	0.29	0.33	0.27	27	40941	76	9	64	3	56
ASE_00411	RNaseP_bact_a links to Rfam database...	0.39	0.40	0.39	36	49362	70	10	47	13	53
ASE_00412	RNaseP_bact_a links to Rfam database...	0.25	0.25	0.25	26	58206	86	11	68	7	79
ASE_00413	RNaseP_bact_a links to Rfam database...	0.60	0.62	0.59	50	44466	49	10	25	14	31
ASE_00414	RNaseP_bact_a links to Rfam database...	0.34	0.34	0.34	32	46267	75	6	55	14	63
ASE_00415	RNaseP_bact_a links to Rfam database...	0.47	0.48	0.46	49	54839	67	5	53	9	54
ASE_00416	RNaseP_bact_a links to Rfam database...	0.32	0.32	0.32	41	77291	98	8	81	9	86
ASE_00417	RNaseP_arch links to Rfam database...	0.42	0.44	0.40	44	54506	75	9	56	10	56
ASE_00418	RNaseP_arch links to Rfam database...	0.17	0.19	0.16	14	38696	80	6	65	9	61
ASE_00419	RNaseP_bact_a links to Rfam database...	0.51	0.52	0.49	54	54836	66	9	47	10	49
ASE_00422	RNaseP_bact_a links to Rfam database...	0.24	0.24	0.24	23	46875	85	1	72	12	71
ASE_00423	RNaseP_bact_a links to Rfam database...	0.36	0.38	0.34	41	56833	84	9	70	5	68
ASE_00426	RNaseP_bact_a links to Rfam database...	0.31	0.33	0.29	36	60951	91	10	78	3	72
ASE_00428	RNaseP_bact_a links to Rfam database...	0.29	0.30	0.29	37	76507	103	11	81	11	88
ASE_00429	-	0.36	0.38	0.35	25	28131	54	12	35	7	41
ASE_00430	RNaseP_bact_a links to Rfam database...	0.52	0.53	0.52	51	46873	56	1	46	9	46
ASE_00431	RNaseP_bact_a links to Rfam database...	0.54	0.54	0.54	51	46266	57	7	36	14	44
ASE_00434	RNaseP_bact_b links to Rfam database...	0.63	0.64	0.63	70	68154	63	4	37	22	40
ASE_00437	RNaseP_bact_a links to Rfam database...	0.30	0.30	0.31	41	79268	98	3	89	6	94
ASE_00438	RNaseP_bact_a links to Rfam database...	0.32	0.34	0.30	39	65935	97	16	76	5	77
ASE_00441	RNaseP_bact_a links to Rfam database...	0.45	0.46	0.45	51	64147	73	3	60	10	61
ASE_00447	RNaseP_bact_a links to Rfam database...	0.61	0.59	0.62	69	60267	47	9	33	5	47
ASE_00448	RNaseP_bact_a links to Rfam database...	0.45	0.43	0.48	48	64161	65	8	44	13	64
ASE_00451	RNaseP_bact_a links to Rfam database...	0.48	0.49	0.47	61	70746	77	7	62	8	64
CRW_00016	Intron_gpI links to Rfam database...	0.24	0.23	0.24	28	77305	101	10	78	13	92
CRW_00608	-	0.67	0.67	0.66	53	35698	45	3	24	18	26
CRW_00610	Intron_gpI links to Rfam database...	0.52	0.52	0.52	42	36234	53	4	35	14	39
CRW_00611	-	0.41	0.43	0.40	32	31294	61	7	42	12	43
CRW_00613	Intron_gpI links to Rfam database...	0.60	0.62	0.59	48	34898	50	1	33	16	30
CRW_00618	Intron_gpI links to Rfam database...	0.01	0.02	0.01	1	56208	107	13	58	36	60
CRW_00629	-	0.21	0.21	0.20	26	91248	110	22	82	6	96
CRW_00632	-	0.43	0.44	0.43	56	82898	90	9	65	16	72
CRW_00633	Intron_gpI links to Rfam database...	0.29	0.29	0.30	31	63442	76	12	61	3	75
CRW_00634	Intron_gpI links to Rfam database...	0.19	0.22	0.17	21	64493	110	25	81	4	73
CRW_00641	-	0.53	0.55	0.51	42	39820	55	6	35	14	34
CRW_00642	-	0.51	0.55	0.47	36	47201	69	14	27	28	29
CRW_00645	-	0.28	0.31	0.26	21	35430	70	11	49	10	46
CRW_00646	-	0.21	0.23	0.19	15	34899	74	11	55	8	49
CRW_00651	-	0.53	0.57	0.49	69	99988	93	19	52	22	52
CRW_00653	-	0.47	0.48	0.46	64	94692	87	11	63	13	70
CRW_00654	-	0.48	0.49	0.47	61	78080	80	11	58	11	63
CRW_00655	-	0.21	0.22	0.20	27	89117	118	9	100	9	97
CRW_00656	-	0.43	0.44	0.42	57	90389	94	12	67	15	72
CRW_00658	-	0.22	0.24	0.20	24	74572	115	12	83	20	78
CRW_00659	-	0.31	0.34	0.28	21	32309	64	13	42	9	40
CRW_00660	-	0.24	0.25	0.23	15	22090	56	7	43	6	45
CRW_00661	-	0.00	0.00	0.00	0	24243	72	14	53	5	51
CRW_00662	-	0.38	0.38	0.38	25	28615	61	4	36	21	40
CRW_00663	-	0.09	0.10	0.09	6	26039	71	9	52	10	55
CRW_00664	-	0.05	0.06	0.05	5	53527	99	22	74	3	73
CRW_00665	-	0.05	0.06	0.04	3	23582	73	12	56	5	45
CRW_00666	-	0.15	0.16	0.15	20	96004	127	16	101	10	106
CRW_00669	-	0.20	0.22	0.18	26	97316	132	24	95	13	93
CRW_00670	Intron_gpI links to Rfam database...	0.35	0.35	0.35	42	70006	81	12	65	4	78
CRW_00671	Intron_gpI links to Rfam database...	0.13	0.13	0.13	15	62723	100	11	86	3	102
CRW_00672	Intron_gpI links to Rfam database...	0.06	0.06	0.06	7	72276	114	17	90	7	104
CRW_00673	-	0.33	0.38	0.29	40	99992	128	28	68	32	65
CRW_00674	Intron_gpI links to Rfam database...	0.28	0.28	0.28	35	83310	106	12	79	15	89
CRW_00676	Intron_gpI links to Rfam database...	0.16	0.17	0.16	19	93407	113	22	80	11	96
CRW_00677	-	0.41	0.44	0.38	46	71888	88	17	59	12	59
CRW_00679	-	0.15	0.17	0.13	18	76502	123	23	93	7	89
CRW_00686	-	0.53	0.55	0.51	69	95132	83	13	52	18	56
CRW_00687	-	0.58	0.62	0.55	41	28605	38	15	19	4	25
CRW_00688	-	0.43	0.44	0.42	25	21885	42	9	26	7	32
CRW_00689	-	0.11	0.12	0.10	9	33582	79	8	71	0	68
CRW_00690	-	0.32	0.33	0.32	23	33339	55	10	39	6	46
CRW_00691	-	0.20	0.22	0.19	15	27182	68	14	50	4	52
CRW_00692	Intron_gpI links to Rfam database...	0.18	0.19	0.18	17	68539	100	16	63	21	73
CRW_00693	-	0.66	0.68	0.64	83	89123	62	18	29	15	39
CRW_00694	-	0.58	0.60	0.57	73	85776	64	16	40	8	49
CRW_00699	-	0.21	0.22	0.20	28	91668	119	19	91	9	98
CRW_00703	-	0.00	0.00	0.00	0	40387	94	12	71	11	66
CRW_00715	-	0.40	0.40	0.39	42	69270	80	3	63	14	62
CRW_00721	-	0.26	0.31	0.22	21	58559	91	29	44	18	47
PDB_00005	Tymo_tRNA-like links to Rfam database...	0.42	0.36	0.50	5	936	6	0	5	1	9
PDB_00018	-	0.18	0.15	0.25	3	1023	9	2	7	0	17
PDB_00020	-	0.39	0.35	0.47	7	765	8	0	8	0	13
PDB_00041	-	0.61	0.50	0.75	6	622	2	0	2	0	6
PDB_00053	-	0.73	0.55	1.00	6	429	0	0	0	0	5
PDB_00056	-	-0.02	0.00	0.00	0	615	15	0	15	0	16
PDB_00078	-	0.31	0.30	0.33	34	49666	74	4	66	4	81
PDB_00123	-	0.31	0.33	0.30	12	4146	28	4	24	0	24
PDB_00124	-	-0.02	0.00	0.00	0	485	11	2	9	0	10
PDB_00128	-	0.84	0.71	1.00	10	486	0	0	0	0	4
PDB_00134	-	0.72	0.63	0.83	5	372	3	0	1	2	3
PDB_00138	-	-0.02	0.00	0.00	0	371	7	0	7	0	8
PDB_00209	-	0.74	0.55	1.00	6	555	0	0	0	0	5
PDB_00243	-	0.54	0.42	0.71	5	623	2	0	2	0	7
PDB_00278	-	0.30	0.29	0.30	21	24907	50	3	45	2	51
PDB_00352	-	0.67	0.58	0.79	11	1211	3	0	3	0	8
PDB_00370	-	0.34	0.48	0.25	12	15177	42	23	13	6	13
PDB_00423	-	0.54	0.51	0.57	38	26729	33	0	29	4	36
PDB_00447	-	0.22	0.20	0.25	9	7104	27	2	25	0	35
PDB_00571	tRNA links to Rfam database...	0.89	0.84	0.95	21	3299	2	1	0	1	4
PDB_00701	-	0.14	0.15	0.14	16	45337	99	9	89	1	93
PDB_00713	-	0.28	0.24	0.33	5	2001	11	0	10	1	16
PDB_00716	HDV_ribozyme links to Rfam database...	0.68	0.57	0.81	13	2685	3	0	3	0	10
PDB_00747	-	0.47	0.46	0.49	37	24455	42	6	33	3	43
PDB_00804	-	0.23	0.24	0.22	12	15345	53	6	37	10	38
PDB_00827	Intron_gpI links to Rfam database...	0.58	0.58	0.57	47	26946	37	6	29	2	34
PDB_00828	Purine links to Rfam database...	0.85	0.81	0.88	22	2460	3	1	2	0	5
PDB_00829	Purine links to Rfam database...	0.78	0.75	0.82	18	2256	4	1	3	0	6
PDB_00842	-	0.72	0.63	0.83	5	372	1	0	1	0	3
PDB_00851	-	0.34	0.34	0.35	14	4713	26	0	26	0	27
PDB_00857	-	0.57	0.60	0.56	9	1065	7	0	7	0	6
PDB_00874	-	-0.02	0.00	0.00	0	928	18	0	18	0	20
PDB_00886	-	-0.01	0.00	0.00	0	4143	43	4	39	0	40
PDB_00917	-	0.35	0.34	0.36	32	35157	63	6	50	7	63
PDB_00918	-	-0.02	0.00	0.00	0	317	8	0	8	0	7
PDB_00919	RNaseP_bact_a links to Rfam database...	0.48	0.46	0.51	47	44161	51	5	40	6	56
PDB_01009	tRNA links to Rfam database...	0.45	0.52	0.39	11	2457	18	6	11	1	10
PDB_01020	Purine links to Rfam database...	0.84	0.83	0.86	19	2256	5	1	2	2	4
PDB_01040	-	0.24	0.25	0.25	5	1108	15	1	14	0	15
PDB_01059	-	-0.03	0.00	0.00	0	226	5	1	4	0	7
PDB_01070	-	0.00	0.00	0.00	0	12665	55	8	47	0	54
PDB_01073	SAM links to Rfam database...	0.17	0.18	0.17	6	4336	29	3	26	0	28
PDB_01092	glmS links to Rfam database...	0.43	0.38	0.49	20	10112	23	2	19	2	32
PDB_01129	-	0.19	0.20	0.18	14	35432	70	19	46	5	57
PDB_01157	-	0.22	0.22	0.22	22	49985	82	11	68	3	76
PDB_01194	-	0.61	0.53	0.73	8	485	3	0	3	0	7
PDB_01201	-	0.75	0.68	0.83	15	1110	3	0	3	0	7
PDB_01203	-	-0.01	0.00	0.00	0	1165	11	0	11	0	19
PDB_01250	-	0.45	0.44	0.46	18	12051	21	11	10	0	23
PDB_01260	-	-0.01	0.00	0.00	0	1809	21	0	21	0	25
PDB_01281	-	-0.04	0.00	0.00	0	365	13	0	13	0	14
PDB_01299	-	0.65	0.53	0.80	8	893	2	0	2	0	7
PDB_01309	-	0.26	0.31	0.22	12	9126	42	14	28	0	27
RFA_00597	Telomerase-vert links to Rfam database...	0.41	0.44	0.39	48	97780	99	18	57	24	61
RFA_00598	Telomerase-vert links to Rfam database...	0.18	0.20	0.17	20	84546	111	30	70	11	81
RFA_00601	Telomerase-vert links to Rfam database...	0.37	0.42	0.33	48	99088	112	28	71	13	66
RFA_00632	HDV_ribozyme links to Rfam database...	0.25	0.25	0.27	7	4069	22	1	18	3	21
RFA_00636	HDV_ribozyme links to Rfam database...	0.40	0.39	0.41	11	3978	19	1	15	3	17
RFA_00767	Corona_pk3 links to Rfam database...	0.48	0.44	0.53	8	1876	8	1	6	1	10
RFA_00768	Corona_pk3 links to Rfam database...	0.50	0.44	0.57	8	1877	8	1	5	2	10
RFA_00769	Corona_pk3 links to Rfam database...	0.41	0.44	0.38	8	1932	13	3	10	0	10
RFA_00770	Corona_pk3 links to Rfam database...	0.51	0.50	0.53	9	1999	12	2	6	4	9
RFA_00773	Corona_pk3 links to Rfam database...	0.42	0.39	0.47	7	1938	12	1	7	4	11
RFA_00779	Corona_pk3 links to Rfam database...	0.26	0.28	0.26	5	1934	14	6	8	0	13
RFA_00808	RydC links to Rfam database...	0.68	0.56	0.82	9	2005	2	2	0	0	7
RFA_00809	RydC links to Rfam database...	0.47	0.38	0.60	6	2135	6	0	4	2	10
TMR_00007	tmRNA links to Rfam database...	0.35	0.36	0.34	39	61661	88	8	68	12	69
TMR_00008	tmRNA links to Rfam database...	0.36	0.38	0.34	40	65947	90	18	61	11	66
TMR_00010	tmRNA links to Rfam database...	0.21	0.23	0.19	22	57857	94	13	78	3	74
TMR_00012	tmRNA links to Rfam database...	0.32	0.37	0.28	30	64513	88	25	52	11	51
TMR_00014	tmRNA links to Rfam database...	0.55	0.56	0.54	62	68520	68	9	44	15	48
TMR_00017	tmRNA links to Rfam database...	0.27	0.26	0.27	27	67061	85	12	61	12	75
TMR_00018	tmRNA links to Rfam database...	0.34	0.37	0.32	34	64515	80	23	48	9	58
TMR_00028	tmRNA links to Rfam database...	0.33	0.36	0.31	35	62721	87	19	60	8	62
TMR_00030	tmRNA links to Rfam database...	0.20	0.20	0.20	22	75743	99	16	74	9	89
TMR_00034	tmRNA links to Rfam database...	0.58	0.60	0.56	66	59913	62	9	43	10	44
TMR_00035	tmRNA links to Rfam database...	0.13	0.15	0.12	15	67772	115	28	81	6	83
TMR_00036	tmRNA links to Rfam database...	0.19	0.20	0.18	20	90411	122	13	81	28	81
TMR_00038	tmRNA links to Rfam database...	0.48	0.51	0.46	56	71130	78	15	52	11	54
TMR_00042	tmRNA links to Rfam database...	0.24	0.24	0.24	24	62737	83	11	63	9	74
TMR_00046	tmRNA links to Rfam database...	0.38	0.42	0.35	40	62722	90	15	58	17	56
TMR_00047	tmRNA links to Rfam database...	0.17	0.21	0.15	12	48434	93	17	53	23	45
TMR_00048	tmRNA links to Rfam database...	0.51	0.55	0.47	52	64870	70	16	42	12	43
TMR_00049	tmRNA links to Rfam database...	0.21	0.22	0.20	19	63093	90	17	61	12	68
TMR_00051	tmRNA links to Rfam database...	0.22	0.24	0.21	23	65593	93	14	73	6	71
TMR_00055	tmRNA links to Rfam database...	0.18	0.18	0.18	21	78884	105	14	84	7	93
TMR_00057	tmRNA links to Rfam database...	0.12	0.14	0.10	11	73814	114	24	71	19	68
TMR_00061	tmRNA links to Rfam database...	0.11	0.12	0.11	12	59575	104	16	82	6	87
TMR_00062	tmRNA links to Rfam database...	0.19	0.20	0.19	21	78493	106	15	77	14	83
TMR_00064	tmRNA links to Rfam database...	0.08	0.09	0.07	9	76906	119	27	86	6	94
TMR_00065	tmRNA links to Rfam database...	0.18	0.20	0.16	21	76506	113	28	81	4	85
TMR_00067	tmRNA links to Rfam database...	0.32	0.34	0.30	39	82084	111	16	76	19	75
TMR_00073	tmRNA links to Rfam database...	0.30	0.29	0.30	34	65591	82	16	62	4	83
TMR_00076	tmRNA links to Rfam database...	0.32	0.34	0.31	34	70767	86	17	58	11	66
TMR_00080	tmRNA links to Rfam database...	0.19	0.22	0.17	21	70379	108	32	68	8	75
TMR_00081	tmRNA links to Rfam database...	0.39	0.42	0.37	45	67039	82	21	56	5	61
TMR_00082	tmRNA links to Rfam database...	0.30	0.33	0.28	32	67782	91	23	59	9	64
TMR_00083	tmRNA links to Rfam database...	0.65	0.68	0.62	71	68151	60	12	31	17	34
TMR_00092	tmRNA links to Rfam database...	0.51	0.56	0.47	57	67407	78	19	45	14	44
TMR_00093	tmRNA links to Rfam database...	0.32	0.35	0.30	36	64141	87	19	65	3	66
TMR_00096	tmRNA links to Rfam database...	0.30	0.31	0.28	31	64871	89	27	51	11	69
TMR_00101	tmRNA links to Rfam database...	0.10	0.10	0.09	11	64143	112	17	90	5	96
TMR_00102	tmRNA links to Rfam database...	0.17	0.19	0.16	19	64143	106	18	81	7	82
TMR_00103	tmRNA links to Rfam database...	0.54	0.56	0.51	61	64142	63	18	40	5	47
TMR_00104	-	0.06	0.07	0.05	5	66692	113	26	72	15	65
TMR_00106	tmRNA links to Rfam database...	0.30	0.33	0.27	39	89957	111	32	72	7	81
TMR_00109	tmRNA links to Rfam database...	0.43	0.44	0.43	54	88283	92	18	55	19	68
TMR_00111	tmRNA links to Rfam database...	0.58	0.60	0.56	73	90394	80	13	45	22	49
TMR_00116	tmRNA links to Rfam database...	0.47	0.49	0.46	51	64868	74	9	52	13	53
TMR_00117	tmRNA links to Rfam database...	0.58	0.58	0.58	69	80080	66	13	38	15	49
TMR_00118	tmRNA links to Rfam database...	0.24	0.25	0.24	30	81279	104	12	85	7	90
TMR_00119	tmRNA links to Rfam database...	0.15	0.16	0.14	17	71891	108	20	82	6	87
TMR_00123	tmRNA links to Rfam database...	0.21	0.23	0.21	23	66318	95	16	73	6	78
TMR_00124	tmRNA links to Rfam database...	0.49	0.54	0.45	53	70383	83	16	48	19	45
TMR_00125	tmRNA links to Rfam database...	0.19	0.19	0.18	19	64157	90	19	66	5	80
TMR_00127	tmRNA links to Rfam database...	0.22	0.23	0.21	22	62729	95	15	69	11	75
TMR_00128	tmRNA links to Rfam database...	0.23	0.26	0.21	25	60957	101	20	73	8	71
TMR_00131	tmRNA links to Rfam database...	0.23	0.24	0.22	24	64871	94	23	62	9	75
TMR_00135	tmRNA links to Rfam database...	0.19	0.21	0.18	21	62717	101	24	73	4	78
TMR_00136	tmRNA links to Rfam database...	0.11	0.12	0.10	12	74574	119	23	82	14	89
TMR_00137	tmRNA links to Rfam database...	0.30	0.34	0.27	30	60965	85	25	55	5	59
TMR_00139	tmRNA links to Rfam database...	0.22	0.24	0.20	22	62017	101	23	66	12	69
TMR_00140	tmRNA links to Rfam database...	0.12	0.14	0.11	14	73790	122	19	97	6	86
TMR_00142	tmRNA links to Rfam database...	0.30	0.33	0.28	34	70753	96	25	64	7	68
TMR_00143	tmRNA links to Rfam database...	0.38	0.40	0.36	41	64506	79	17	56	6	62
TMR_00144	tmRNA links to Rfam database...	0.24	0.25	0.22	26	74189	95	17	73	5	77
TMR_00146	tmRNA links to Rfam database...	0.49	0.50	0.49	21	32088	61	12	10	39	21
TMR_00150	tmRNA links to Rfam database...	0.54	0.62	0.46	26	43015	75	12	18	45	16
TMR_00152	tmRNA links to Rfam database...	0.25	0.26	0.24	30	81280	102	19	77	6	85
TMR_00155	tmRNA links to Rfam database...	0.37	0.38	0.36	39	61668	82	13	56	13	65
TMR_00156	tmRNA links to Rfam database...	0.11	0.12	0.10	12	60263	109	15	88	6	85
TMR_00158	tmRNA links to Rfam database...	0.35	0.39	0.32	39	60603	91	18	66	7	60
TMR_00159	tmRNA links to Rfam database...	0.39	0.41	0.37	38	62025	77	16	49	12	54
TMR_00160	tmRNA links to Rfam database...	0.20	0.20	0.19	19	64522	87	16	63	8	76
TMR_00164	tmRNA links to Rfam database...	0.19	0.20	0.19	21	66683	100	13	78	9	85
TMR_00165	tmRNA links to Rfam database...	0.30	0.32	0.29	31	61670	83	21	54	8	66
TMR_00166	tmRNA links to Rfam database...	0.28	0.29	0.27	29	61668	89	12	67	10	72
TMR_00168	tmRNA links to Rfam database...	0.66	0.66	0.66	75	60962	52	3	35	14	39
TMR_00173	tmRNA links to Rfam database...	0.16	0.19	0.14	8	42138	90	11	38	41	34
TMR_00179	tmRNA links to Rfam database...	0.32	0.35	0.31	34	67050	93	11	66	16	64
TMR_00180	tmRNA links to Rfam database...	0.54	0.56	0.52	55	67055	74	14	37	23	44
TMR_00182	tmRNA links to Rfam database...	0.05	0.06	0.05	6	66318	115	15	91	9	96
TMR_00183	tmRNA links to Rfam database...	0.17	0.17	0.16	18	63079	95	15	78	2	85
TMR_00184	tmRNA links to Rfam database...	0.25	0.26	0.24	27	63078	91	16	69	6	75
TMR_00193	tmRNA links to Rfam database...	0.30	0.33	0.28	26	59247	86	21	46	19	54
TMR_00194	tmRNA links to Rfam database...	0.39	0.41	0.37	38	62732	83	18	47	18	55
TMR_00196	tmRNA links to Rfam database...	0.28	0.30	0.27	29	60968	82	15	63	4	68
TMR_00199	tmRNA links to Rfam database...	0.28	0.30	0.26	28	62726	86	24	57	5	64
TMR_00200	-	0.29	0.31	0.28	23	41533	71	15	45	11	52
TMR_00204	tmRNA links to Rfam database...	0.35	0.37	0.34	36	60271	82	20	51	11	61
TMR_00207	tmRNA links to Rfam database...	0.26	0.27	0.25	28	72276	92	17	69	6	75
TMR_00223	tmRNA links to Rfam database...	0.15	0.17	0.13	16	64141	109	23	81	5	79
TMR_00224	tmRNA links to Rfam database...	0.15	0.17	0.14	17	64856	111	25	82	4	84
TMR_00226	tmRNA links to Rfam database...	0.53	0.55	0.52	58	69639	65	13	41	11	47
TMR_00227	tmRNA links to Rfam database...	0.27	0.30	0.25	30	70006	101	19	70	12	71
TMR_00228	tmRNA links to Rfam database...	0.20	0.22	0.18	24	88279	112	33	74	5	84
TMR_00234	tmRNA links to Rfam database...	0.33	0.34	0.32	35	58886	86	13	62	11	67
TMR_00238	tmRNA links to Rfam database...	0.14	0.15	0.13	15	84549	114	27	75	12	86
TMR_00239	tmRNA links to Rfam database...	0.41	0.43	0.40	41	61673	76	12	50	14	55
TMR_00240	tmRNA links to Rfam database...	0.32	0.38	0.27	32	63073	92	29	56	7	53
TMR_00246	-	0.12	0.15	0.10	5	78161	127	10	34	83	29
TMR_00248	tmRNA links to Rfam database...	0.37	0.42	0.32	16	54235	99	9	25	65	22
TMR_00257	tmRNA links to Rfam database...	0.26	0.29	0.24	28	67045	100	17	71	12	70
TMR_00259	tmRNA links to Rfam database...	0.23	0.24	0.22	25	67781	96	13	77	6	78
TMR_00261	tmRNA links to Rfam database...	0.23	0.25	0.21	25	66677	96	20	73	3	76
TMR_00262	tmRNA links to Rfam database...	0.32	0.36	0.30	37	74181	94	21	66	7	67
TMR_00271	tmRNA links to Rfam database...	0.19	0.21	0.18	19	64156	98	18	68	12	72
TMR_00274	tmRNA links to Rfam database...	0.33	0.35	0.31	37	66677	89	16	65	8	68
TMR_00278	tmRNA links to Rfam database...	0.18	0.20	0.17	20	67781	101	21	74	6	82
TMR_00279	tmRNA links to Rfam database...	0.37	0.39	0.35	37	68899	90	17	53	20	57
TMR_00280	tmRNA links to Rfam database...	0.15	0.16	0.14	16	65949	113	18	83	12	85
TMR_00283	tmRNA links to Rfam database...	0.07	0.07	0.07	7	65237	104	21	76	7	89
TMR_00289	tmRNA links to Rfam database...	0.24	0.24	0.24	24	67060	86	18	59	9	74
TMR_00290	tmRNA links to Rfam database...	0.36	0.38	0.35	35	64160	89	18	48	23	57
TMR_00296	tmRNA links to Rfam database...	0.30	0.32	0.30	31	68901	86	21	53	12	67
TMR_00298	tmRNA links to Rfam database...	0.22	0.25	0.20	25	68138	104	19	83	2	76
TMR_00300	tmRNA links to Rfam database...	0.38	0.38	0.39	43	70389	82	7	61	14	69
TMR_00301	tmRNA links to Rfam database...	0.26	0.30	0.23	29	82089	103	31	66	6	67
TMR_00302	tmRNA links to Rfam database...	0.23	0.27	0.21	25	77300	107	31	65	11	69
TMR_00305	tmRNA links to Rfam database...	0.17	0.19	0.16	19	60955	105	18	83	4	83
TMR_00306	tmRNA links to Rfam database...	0.21	0.22	0.21	23	64150	96	13	75	8	83
TMR_00310	tmRNA links to Rfam database...	0.32	0.34	0.31	33	63798	87	15	57	15	65
TMR_00317	tmRNA links to Rfam database...	0.38	0.39	0.37	40	68158	78	15	52	11	62
TMR_00331	tmRNA links to Rfam database...	0.20	0.22	0.18	18	66694	105	22	61	22	64
TMR_00332	tmRNA links to Rfam database...	0.27	0.29	0.25	29	67043	96	21	68	7	70
TMR_00334	tmRNA links to Rfam database...	0.55	0.56	0.54	57	66689	72	12	37	23	44
TMR_00337	tmRNA links to Rfam database...	0.39	0.39	0.40	46	82912	83	21	49	13	73
TMR_00340	tmRNA links to Rfam database...	0.37	0.38	0.35	31	64173	84	9	48	27	50
TMR_00341	tmRNA links to Rfam database...	0.33	0.36	0.30	33	63080	93	17	60	16	59
TMR_00343	tmRNA links to Rfam database...	0.36	0.39	0.33	41	64857	88	11	71	6	64
TMR_00345	tmRNA links to Rfam database...	0.44	0.46	0.41	48	63787	79	7	61	11	56
TMR_00346	tmRNA links to Rfam database...	0.24	0.26	0.22	24	64153	92	22	62	8	70
TMR_00348	tmRNA links to Rfam database...	0.16	0.17	0.16	17	77314	110	21	69	20	82
TMR_00352	tmRNA links to Rfam database...	0.08	0.09	0.06	7	95157	141	27	75	39	68
TMR_00353	tmRNA links to Rfam database...	0.32	0.35	0.30	37	84130	113	15	73	25	68
TMR_00357	tmRNA links to Rfam database...	0.29	0.33	0.26	30	82913	101	26	59	16	62
TMR_00358	tmRNA links to Rfam database...	0.40	0.41	0.39	41	74974	93	16	47	30	58
TMR_00361	-	0.25	0.32	0.20	23	93412	113	37	56	20	49
TMR_00366	tmRNA links to Rfam database...	0.25	0.27	0.23	27	67778	97	19	72	6	73
TMR_00372	tmRNA links to Rfam database...	0.34	0.39	0.31	37	70380	100	22	61	17	59
TMR_00374	tmRNA links to Rfam database...	0.11	0.12	0.10	11	81695	122	17	87	18	81
TMR_00375	tmRNA links to Rfam database...	0.29	0.31	0.28	30	73427	104	19	60	25	68
TMR_00376	tmRNA links to Rfam database...	0.29	0.33	0.27	31	74575	101	23	62	16	64
TMR_00378	tmRNA links to Rfam database...	0.17	0.20	0.15	19	67773	107	29	75	3	78
TMR_00383	tmRNA links to Rfam database...	0.21	0.22	0.21	22	66688	94	20	65	9	78
TMR_00384	tmRNA links to Rfam database...	0.43	0.45	0.41	49	65584	75	17	53	5	59
TMR_00393	tmRNA links to Rfam database...	0.23	0.26	0.21	14	53234	98	12	41	45	39
TMR_00395	tmRNA links to Rfam database...	0.34	0.36	0.33	39	64500	82	19	62	1	70
TMR_00398	tmRNA links to Rfam database...	0.28	0.29	0.28	31	65230	85	13	67	5	75
TMR_00399	tmRNA links to Rfam database...	0.30	0.32	0.29	30	64876	86	18	56	12	64
TMR_00404	tmRNA links to Rfam database...	0.20	0.22	0.18	20	67416	98	13	79	6	72
TMR_00408	tmRNA links to Rfam database...	0.55	0.60	0.50	53	65960	72	20	33	19	35
TMR_00409	tmRNA links to Rfam database...	0.63	0.70	0.57	32	68579	86	9	15	62	14
TMR_00411	tmRNA links to Rfam database...	0.37	0.40	0.33	35	60970	85	25	45	15	52
TMR_00415	tmRNA links to Rfam database...	0.23	0.25	0.22	25	67049	90	26	61	3	76
TMR_00419	tmRNA links to Rfam database...	0.35	0.35	0.36	39	81701	93	10	60	23	72
TMR_00422	tmRNA links to Rfam database...	0.50	0.54	0.47	50	67789	76	20	37	19	42
TMR_00423	tmRNA links to Rfam database...	0.30	0.36	0.26	26	63802	94	29	46	19	47
TMR_00427	tmRNA links to Rfam database...	0.15	0.15	0.14	15	67420	98	21	72	5	82
TMR_00429	tmRNA links to Rfam database...	0.42	0.44	0.40	48	74572	81	17	54	10	61
TMR_00430	tmRNA links to Rfam database...	0.13	0.15	0.12	16	82490	120	29	86	5	93
TMR_00431	tmRNA links to Rfam database...	0.32	0.36	0.28	20	51931	82	12	40	30	35
TMR_00432	tmRNA links to Rfam database...	0.25	0.28	0.23	29	79676	103	18	77	8	75
TMR_00433	tmRNA links to Rfam database...	0.40	0.44	0.36	47	80070	93	25	58	10	59
TMR_00439	tmRNA links to Rfam database...	0.29	0.33	0.27	33	68512	106	27	63	16	68
TMR_00441	tmRNA links to Rfam database...	0.22	0.23	0.21	19	62036	92	24	49	19	64
TMR_00443	tmRNA links to Rfam database...	0.23	0.25	0.22	26	67043	107	10	82	15	78
TMR_00448	tmRNA links to Rfam database...	0.21	0.22	0.20	20	62028	93	9	71	13	72
TMR_00451	tmRNA links to Rfam database...	0.15	0.17	0.13	15	63432	103	35	64	4	74
TMR_00457	tmRNA links to Rfam database...	0.30	0.33	0.28	34	78483	99	24	65	10	68
TMR_00458	tmRNA links to Rfam database...	0.32	0.33	0.30	31	63443	80	16	56	8	62
TMR_00460	tmRNA links to Rfam database...	0.40	0.43	0.37	46	79278	86	23	54	9	60
TMR_00465	tmRNA links to Rfam database...	0.15	0.16	0.15	15	64159	98	19	68	11	79
TMR_00469	tmRNA links to Rfam database...	0.17	0.19	0.16	19	64500	111	14	87	10	81
TMR_00472	tmRNA links to Rfam database...	0.26	0.27	0.25	26	64516	87	16	62	9	71
TMR_00478	tmRNA links to Rfam database...	0.21	0.22	0.20	22	71899	95	23	66	6	77
TMR_00498	tmRNA links to Rfam database...	0.38	0.42	0.35	42	68886	89	22	56	11	57
TMR_00499	tmRNA links to Rfam database...	0.22	0.24	0.21	24	64504	99	13	79	7	75
TMR_00501	tmRNA links to Rfam database...	0.10	0.11	0.09	10	62366	110	27	78	5	82
TMR_00502	tmRNA links to Rfam database...	0.36	0.40	0.32	37	75352	92	19	58	15	56
TMR_00503	tmRNA links to Rfam database...	0.44	0.48	0.40	53	67765	81	27	51	3	58
TMR_00519	tmRNA links to Rfam database...	0.14	0.15	0.13	14	63085	101	22	69	10	81
TMR_00520	tmRNA links to Rfam database...	0.17	0.18	0.16	18	63075	102	28	69	5	81
TMR_00522	tmRNA links to Rfam database...	0.27	0.30	0.24	29	63068	94	31	62	1	68
TMR_00528	tmRNA links to Rfam database...	0.23	0.25	0.22	24	63081	92	28	57	7	73
TMR_00540	tmRNA links to Rfam database...	0.26	0.28	0.24	29	73417	98	15	75	8	75
TMR_00541	tmRNA links to Rfam database...	0.23	0.24	0.22	25	61660	101	15	76	10	80
TMR_00544	tmRNA links to Rfam database...	0.35	0.37	0.34	40	89557	97	22	57	18	68
TMR_00547	tmRNA links to Rfam database...	0.46	0.46	0.46	46	65240	72	12	43	17	54
TMR_00553	tmRNA links to Rfam database...	0.27	0.28	0.25	23	48114	76	20	48	8	58
TMR_00559	tmRNA links to Rfam database...	0.32	0.34	0.30	34	62369	85	19	59	7	67
TMR_00560	tmRNA links to Rfam database...	0.19	0.19	0.19	19	60974	95	4	78	13	79
TMR_00562	tmRNA links to Rfam database...	0.21	0.23	0.19	23	72653	102	23	72	7	79
TMR_00563	tmRNA links to Rfam database...	0.31	0.35	0.28	36	75336	98	16	78	4	67
TMR_00566	tmRNA links to Rfam database...	0.29	0.30	0.28	30	60617	91	11	68	12	70
TMR_00568	tmRNA links to Rfam database...	0.39	0.39	0.39	39	60625	76	15	47	14	60
TMR_00570	tmRNA links to Rfam database...	0.38	0.38	0.39	37	60283	73	15	43	15	60
TMR_00571	tmRNA links to Rfam database...	0.50	0.51	0.50	50	60625	71	7	44	20	49
TMR_00576	tmRNA links to Rfam database...	0.43	0.44	0.42	45	60272	74	11	50	13	57
TMR_00579	tmRNA links to Rfam database...	0.23	0.28	0.19	25	80471	116	35	70	11	65
TMR_00580	tmRNA links to Rfam database...	0.43	0.45	0.41	45	60615	82	7	59	16	55
TMR_00581	tmRNA links to Rfam database...	0.20	0.21	0.19	21	62373	96	15	72	9	77
TMR_00584	tmRNA links to Rfam database...	0.27	0.28	0.26	27	60972	91	13	63	15	70
TMR_00586	tmRNA links to Rfam database...	0.47	0.49	0.44	48	60967	74	19	41	14	49
TMR_00587	tmRNA links to Rfam database...	0.36	0.37	0.36	37	61321	84	7	60	17	63
TMR_00588	tmRNA links to Rfam database...	0.34	0.36	0.33	36	77312	79	22	51	6	65
TMR_00594	tmRNA links to Rfam database...	0.21	0.22	0.21	23	79292	94	17	69	8	81
TMR_00596	tmRNA links to Rfam database...	0.16	0.18	0.15	17	78093	107	23	77	7	78
TMR_00599	tmRNA links to Rfam database...	0.24	0.31	0.19	22	63077	98	31	60	7	50
TMR_00600	tmRNA links to Rfam database...	0.21	0.22	0.20	25	79675	103	27	73	3	90
TMR_00601	tmRNA links to Rfam database...	0.32	0.36	0.28	15	58943	88	14	24	50	27
TMR_00603	tmRNA links to Rfam database...	0.43	0.49	0.38	21	60322	91	11	24	56	22
TMR_00604	tmRNA links to Rfam database...	0.48	0.50	0.47	56	62716	75	12	51	12	56
TMR_00605	tmRNA links to Rfam database...	0.35	0.36	0.35	39	74193	86	12	61	13	69
TMR_00606	tmRNA links to Rfam database...	0.54	0.55	0.52	59	68893	69	17	37	15	48
TMR_00609	tmRNA links to Rfam database...	0.56	0.55	0.56	62	63436	64	4	44	16	51
TMR_00610	tmRNA links to Rfam database...	0.64	0.65	0.64	68	62021	54	8	31	15	36
TMR_00611	tmRNA links to Rfam database...	0.46	0.49	0.43	50	61309	69	22	44	3	52
TMR_00612	tmRNA links to Rfam database...	0.32	0.34	0.30	35	60610	88	10	71	7	69
TMR_00614	tmRNA links to Rfam database...	0.31	0.32	0.30	33	60965	83	13	64	6	71
TMR_00615	tmRNA links to Rfam database...	0.56	0.60	0.53	58	63793	63	17	35	11	38
TMR_00616	tmRNA links to Rfam database...	0.36	0.39	0.34	39	67045	86	14	63	9	60
TMR_00617	tmRNA links to Rfam database...	0.29	0.33	0.26	19	34644	67	14	39	14	39
TMR_00623	tmRNA links to Rfam database...	0.41	0.43	0.40	46	61309	72	11	59	2	62
TMR_00624	tmRNA links to Rfam database...	0.36	0.37	0.35	40	62368	87	6	67	14	68
TMR_00625	tmRNA links to Rfam database...	0.23	0.25	0.22	26	78883	110	20	74	16	80
TMR_00626	tmRNA links to Rfam database...	0.47	0.50	0.44	54	67773	78	17	52	9	55
TMR_00680	tmRNA links to Rfam database...	0.43	0.47	0.39	47	67776	86	20	53	13	52
TMR_00681	tmRNA links to Rfam database...	0.25	0.26	0.25	25	65964	89	7	70	12	72
TMR_00683	tmRNA links to Rfam database...	0.19	0.22	0.16	22	82894	129	30	82	17	78
TMR_00686	tmRNA links to Rfam database...	0.24	0.26	0.22	28	71123	108	18	84	6	80
TMR_00687	tmRNA links to Rfam database...	0.33	0.36	0.30	40	71499	100	18	74	8	71
TMR_00696	tmRNA links to Rfam database...	0.24	0.25	0.24	28	84961	109	13	76	20	86
TMR_00698	tmRNA links to Rfam database...	0.16	0.16	0.15	17	63080	94	15	78	1	87
TMR_00699	tmRNA links to Rfam database...	0.23	0.25	0.22	25	67048	94	15	73	6	77
TMR_00702	tmRNA links to Rfam database...	0.13	0.14	0.12	14	67047	107	9	91	7	86
TMR_00703	tmRNA links to Rfam database...	0.21	0.23	0.20	23	67411	99	22	72	5	76
TMR_00706	tmRNA links to Rfam database...	0.48	0.47	0.49	48	66332	66	10	40	16	55
TMR_00711	tmRNA links to Rfam database...	0.43	0.48	0.38	47	67773	87	27	49	11	51
TMR_00712	tmRNA links to Rfam database...	0.21	0.22	0.20	24	78486	108	23	73	12	85
TMR_00716	tmRNA links to Rfam database...	0.10	0.10	0.10	10	62733	101	13	79	9	90

^top

Performance of Vsfold4 - scored lower in this pairwise comparison

1. Total counts & total scores for Vsfold4

Total Base Pair Counts
Total TP	17237
Total TN	34150186
Total FP	32510
Total FP CONTRA	4018
Total FP INCONS	25617
Total FP COMP	2875
Total FN	38367

Total Scores
MCC	0.337
Average MCC ± 95% Confidence Intervals	0.346 ± 0.013
Sensitivity	0.310
Positive Predictive Value	0.368
Nr of predictions	600

^top

2. Individual counts for Vsfold4 [ download as .csv ]

RNA Chain	Rfam family	MCC	SENS	PPV	TP	TN	FP	FP CONTRA	FP INCONS	FP COMP	FN
ASE_00001	RNaseP_arch links to Rfam database...	0.52	0.45	0.60	34	34134	27	5	18	4	41
ASE_00002	RNaseP_arch links to Rfam database...	0.33	0.30	0.37	22	35451	38	2	36	0	51
ASE_00004	RNaseP_bact_a links to Rfam database...	0.66	0.59	0.74	57	47818	20	1	19	0	40
ASE_00005	RNaseP_bact_a links to Rfam database...	0.31	0.26	0.36	31	57883	60	1	55	4	86
ASE_00006	RNaseP_bact_a links to Rfam database...	0.40	0.37	0.45	34	47510	43	0	42	1	59
ASE_00007	RNaseP_bact_a links to Rfam database...	0.36	0.33	0.40	36	59596	57	1	52	4	74
ASE_00009	RNaseP_arch links to Rfam database...	0.20	0.18	0.22	12	26051	43	3	40	0	55
ASE_00012	RNaseP_bact_a links to Rfam database...	0.34	0.30	0.39	37	73826	62	2	55	5	86
ASE_00014	RNaseP_arch links to Rfam database...	0.38	0.36	0.41	38	54192	56	7	48	1	68
ASE_00017	RNaseP_nuc links to Rfam database...	0.16	0.16	0.16	10	50976	69	14	40	15	54
ASE_00018	RNaseP_bact_a links to Rfam database...	0.48	0.43	0.54	57	80496	48	2	46	0	77
ASE_00020	RNaseP_bact_a links to Rfam database...	0.41	0.36	0.48	45	73827	48	1	47	0	81
ASE_00022	RNaseP_bact_b links to Rfam database...	0.48	0.41	0.57	51	82938	42	5	34	3	73
ASE_00023	RNaseP_bact_a links to Rfam database...	0.41	0.39	0.43	49	84141	67	5	60	2	78
ASE_00025	RNaseP_nuc links to Rfam database...	0.30	0.28	0.31	20	78542	82	17	27	38	51
ASE_00026	RNaseP_bact_a links to Rfam database...	0.43	0.37	0.49	41	59601	43	11	32	0	69
ASE_00028	RNaseP_bact_b links to Rfam database...	0.34	0.30	0.38	38	84565	63	6	57	0	88
ASE_00029	RNaseP_bact_a links to Rfam database...	0.29	0.26	0.33	32	82932	64	7	57	0	90
ASE_00030	RNaseP_bact_a links to Rfam database...	0.53	0.46	0.61	66	85383	42	5	37	0	79
ASE_00031	RNaseP_bact_a links to Rfam database...	0.50	0.45	0.56	57	86635	46	1	43	2	69
ASE_00032	RNaseP_bact_a links to Rfam database...	0.43	0.39	0.47	46	80103	52	5	46	1	72
ASE_00033	RNaseP_bact_a links to Rfam database...	0.39	0.34	0.44	41	64887	53	1	51	1	80
ASE_00035	RNaseP_bact_a links to Rfam database...	0.26	0.24	0.29	28	70403	69	3	66	0	90
ASE_00036	RNaseP_bact_a links to Rfam database...	0.37	0.33	0.42	44	75751	61	6	54	1	88
ASE_00037	RNaseP_bact_a links to Rfam database...	0.31	0.26	0.37	29	59262	51	0	49	2	81
ASE_00038	RNaseP_bact_a links to Rfam database...	0.47	0.44	0.51	44	53541	45	0	43	2	57
ASE_00040	RNaseP_bact_a links to Rfam database...	0.42	0.37	0.49	49	78903	51	1	50	0	84
ASE_00041	RNaseP_bact_a links to Rfam database...	0.29	0.25	0.34	27	57551	52	8	44	0	81
ASE_00042	RNaseP_bact_a links to Rfam database...	0.44	0.38	0.51	55	89992	56	2	51	3	90
ASE_00044	RNaseP_bact_a links to Rfam database...	0.54	0.52	0.57	55	54518	46	3	39	4	50
ASE_00046	RNaseP_bact_a links to Rfam database...	0.32	0.26	0.39	27	50334	43	3	39	1	76
ASE_00047	RNaseP_bact_a links to Rfam database...	0.27	0.23	0.31	30	74208	67	2	65	0	100
ASE_00052	RNaseP_bact_a links to Rfam database...	0.35	0.30	0.41	34	61343	49	7	41	1	78
ASE_00053	RNaseP_bact_a links to Rfam database...	0.54	0.47	0.63	62	79303	37	7	29	1	71
ASE_00056	-	0.29	0.26	0.32	19	30817	42	4	36	2	53
ASE_00057	RNaseP_bact_a links to Rfam database...	0.50	0.45	0.57	60	82109	48	7	39	2	74
ASE_00064	RNaseP_bact_a links to Rfam database...	0.47	0.42	0.54	37	45382	38	0	32	6	52
ASE_00066	RNaseP_bact_a links to Rfam database...	0.49	0.42	0.56	55	72292	44	0	43	1	75
ASE_00068	RNaseP_bact_a links to Rfam database...	0.35	0.29	0.41	25	37614	39	1	35	3	60
ASE_00069	RNaseP_bact_a links to Rfam database...	0.44	0.37	0.53	52	82930	47	7	39	1	88
ASE_00074	RNaseP_bact_a links to Rfam database...	0.43	0.39	0.47	47	67797	52	2	50	0	72
ASE_00076	RNaseP_bact_a links to Rfam database...	0.35	0.32	0.39	38	68168	59	6	53	0	80
ASE_00077	RNaseP_bact_a links to Rfam database...	0.27	0.26	0.30	22	45076	56	5	47	4	64
ASE_00078	RNaseP_bact_a links to Rfam database...	0.32	0.30	0.35	25	42999	52	3	44	5	58
ASE_00079	RNaseP_bact_a links to Rfam database...	0.42	0.39	0.46	39	55526	46	4	42	0	61
ASE_00080	RNaseP_bact_a links to Rfam database...	0.37	0.32	0.43	39	71540	52	2	50	0	84
ASE_00081	RNaseP_bact_a links to Rfam database...	0.39	0.35	0.45	34	49694	42	3	39	0	63
ASE_00082	RNaseP_bact_a links to Rfam database...	0.39	0.34	0.44	39	70412	57	1	48	8	77
ASE_00083	RNaseP_bact_a links to Rfam database...	0.55	0.50	0.60	55	62389	41	5	32	4	55
ASE_00084	RNaseP_bact_a links to Rfam database...	0.51	0.44	0.59	44	53554	35	3	27	5	55
ASE_00087	RNaseP_bact_a links to Rfam database...	0.42	0.35	0.52	50	88313	51	2	45	4	94
ASE_00089	-	0.38	0.33	0.45	26	31317	33	1	31	1	53
ASE_00090	RNaseP_bact_a links to Rfam database...	0.48	0.46	0.51	46	55521	46	4	40	2	55
ASE_00092	RNaseP_bact_a links to Rfam database...	0.51	0.46	0.58	52	63456	38	10	28	0	61
ASE_00096	RNaseP_bact_a links to Rfam database...	0.56	0.50	0.62	58	63453	35	0	35	0	57
ASE_00099	RNaseP_bact_a links to Rfam database...	0.58	0.53	0.63	64	64518	39	5	33	1	56
ASE_00100	RNaseP_nuc links to Rfam database...	0.34	0.32	0.38	24	82151	96	4	36	56	52
ASE_00104	RNaseP_bact_a links to Rfam database...	0.51	0.45	0.57	54	64167	40	3	37	0	65
ASE_00105	RNaseP_bact_a links to Rfam database...	0.32	0.29	0.37	32	64174	57	6	49	2	79
ASE_00107	RNaseP_bact_a links to Rfam database...	0.41	0.36	0.46	46	73053	54	2	52	0	81
ASE_00108	RNaseP_nuc links to Rfam database...	0.25	0.25	0.25	16	46908	69	10	37	22	47
ASE_00111	RNaseP_nuc links to Rfam database...	0.17	0.19	0.15	11	50013	75	25	37	13	46
ASE_00112	RNaseP_bact_a links to Rfam database...	0.49	0.43	0.56	50	75376	41	4	36	1	66
ASE_00115	RNaseP_bact_a links to Rfam database...	0.43	0.39	0.49	39	54535	48	6	35	7	62
ASE_00116	RNaseP_arch links to Rfam database...	0.17	0.15	0.19	10	31573	43	2	41	0	56
ASE_00118	RNaseP_bact_a links to Rfam database...	0.37	0.35	0.40	36	60636	54	4	50	0	66
ASE_00119	RNaseP_bact_a links to Rfam database...	0.72	0.63	0.82	68	62752	20	1	14	5	40
ASE_00120	RNaseP_arch links to Rfam database...	0.35	0.31	0.39	29	46897	45	3	42	0	65
ASE_00121	RNaseP_arch links to Rfam database...	0.20	0.17	0.22	16	45078	58	4	52	2	76
ASE_00122	RNaseP_bact_a links to Rfam database...	0.49	0.42	0.58	37	43301	28	1	26	1	51
ASE_00123	RNaseP_bact_a links to Rfam database...	0.33	0.29	0.38	25	38437	45	0	41	4	60
ASE_00125	RNaseP_bact_a links to Rfam database...	0.41	0.38	0.45	33	39267	40	2	38	0	55
ASE_00126	RNaseP_bact_a links to Rfam database...	0.52	0.46	0.58	38	40405	33	0	27	6	44
ASE_00128	RNaseP_bact_a links to Rfam database...	0.47	0.41	0.53	41	53224	39	4	32	3	59
ASE_00129	RNaseP_bact_a links to Rfam database...	0.55	0.49	0.61	54	62747	34	5	29	0	57
ASE_00131	RNaseP_bact_a links to Rfam database...	0.53	0.46	0.61	39	39276	30	4	21	5	46
ASE_00132	RNaseP_bact_a links to Rfam database...	0.55	0.49	0.60	47	50325	33	4	27	2	48
ASE_00134	RNaseP_bact_a links to Rfam database...	0.46	0.41	0.51	39	50326	42	5	33	4	56
ASE_00135	RNaseP_bact_a links to Rfam database...	0.38	0.35	0.42	38	63100	57	8	44	5	71
ASE_00136	RNaseP_bact_a links to Rfam database...	0.52	0.47	0.59	43	48132	39	1	29	9	49
ASE_00137	RNaseP_bact_a links to Rfam database...	0.52	0.48	0.56	47	48432	37	0	37	0	51
ASE_00138	RNaseP_bact_a links to Rfam database...	0.42	0.38	0.47	31	40404	37	5	30	2	50
ASE_00139	RNaseP_bact_a links to Rfam database...	0.57	0.49	0.66	51	54208	29	1	25	3	53
ASE_00140	RNaseP_bact_a links to Rfam database...	0.42	0.37	0.48	46	70780	50	4	46	0	79
ASE_00142	RNaseP_bact_a links to Rfam database...	0.50	0.44	0.57	54	67066	41	6	35	0	68
ASE_00145	RNaseP_arch links to Rfam database...	0.25	0.23	0.27	25	70033	69	3	64	2	86
ASE_00146	RNaseP_bact_a links to Rfam database...	0.30	0.26	0.35	32	70784	61	2	58	1	92
ASE_00151	RNaseP_bact_a links to Rfam database...	0.43	0.39	0.47	38	51922	43	11	32	0	60
ASE_00153	RNaseP_nuc links to Rfam database...	0.38	0.37	0.39	27	57561	65	9	33	23	46
ASE_00154	RNaseP_arch links to Rfam database...	0.34	0.30	0.40	32	65260	50	5	44	1	75
ASE_00155	RNaseP_arch links to Rfam database...	0.31	0.27	0.36	39	93419	73	2	68	3	103
ASE_00163	RNaseP_bact_a links to Rfam database...	0.36	0.32	0.39	30	53225	50	8	38	4	63
ASE_00165	RNaseP_bact_a links to Rfam database...	0.43	0.40	0.46	40	52888	48	6	41	1	61
ASE_00168	RNaseP_nuc links to Rfam database...	0.31	0.34	0.29	22	60650	75	19	35	21	42
ASE_00169	RNaseP_bact_a links to Rfam database...	0.54	0.47	0.63	50	57211	31	2	28	1	57
ASE_00170	RNaseP_bact_a links to Rfam database...	0.47	0.44	0.50	41	48746	41	4	37	0	52
ASE_00171	RNaseP_bact_a links to Rfam database...	0.39	0.33	0.46	31	48449	40	2	34	4	63
ASE_00172	RNaseP_bact_a links to Rfam database...	0.44	0.39	0.51	41	58916	40	5	34	1	65
ASE_00174	RNaseP_bact_a links to Rfam database...	0.42	0.38	0.47	41	60988	46	2	44	0	68
ASE_00175	RNaseP_bact_a links to Rfam database...	0.41	0.37	0.46	40	59944	48	0	47	1	67
ASE_00176	RNaseP_bact_a links to Rfam database...	0.56	0.52	0.61	57	59937	38	0	37	1	53
ASE_00179	RNaseP_bact_a links to Rfam database...	0.57	0.51	0.63	43	44185	25	5	20	0	41
ASE_00180	RNaseP_bact_a links to Rfam database...	0.38	0.36	0.41	36	51273	52	4	47	1	64
ASE_00181	RNaseP_bact_a links to Rfam database...	0.49	0.45	0.52	48	57538	48	2	42	4	58
ASE_00182	RNaseP_bact_a links to Rfam database...	0.41	0.35	0.48	47	84158	50	6	44	0	89
ASE_00183	RNaseP_bact_a links to Rfam database...	0.44	0.38	0.50	43	61339	48	1	42	5	70
ASE_00184	RNaseP_bact_a links to Rfam database...	0.50	0.45	0.56	46	54533	41	1	35	5	56
ASE_00185	RNaseP_bact_a links to Rfam database...	0.39	0.32	0.47	41	73448	49	2	45	2	87
ASE_00186	RNaseP_bact_a links to Rfam database...	0.34	0.30	0.38	40	78899	66	3	61	2	92
ASE_00187	RNaseP_arch links to Rfam database...	0.25	0.23	0.28	26	68543	67	7	59	1	89
ASE_00189	RNaseP_bact_b links to Rfam database...	0.28	0.25	0.31	26	63107	57	4	53	0	76
ASE_00190	RNaseP_bact_b links to Rfam database...	0.42	0.37	0.49	33	45383	38	7	28	3	57
ASE_00192	RNaseP_bact_b links to Rfam database...	0.26	0.23	0.30	30	84565	77	7	64	6	103
ASE_00194	RNaseP_bact_b links to Rfam database...	0.45	0.40	0.51	48	73442	50	9	37	4	71
ASE_00195	-	0.29	0.27	0.32	36	86208	77	4	72	1	97
ASE_00196	RNaseP_arch links to Rfam database...	0.17	0.15	0.19	11	31569	47	4	42	1	64
ASE_00197	RNaseP_bact_a links to Rfam database...	0.38	0.33	0.44	48	89143	64	2	60	2	97
ASE_00198	RNaseP_bact_a links to Rfam database...	0.50	0.44	0.56	45	52570	40	0	35	5	57
ASE_00203	RNaseP_bact_a links to Rfam database...	0.48	0.44	0.52	42	46584	39	0	39	0	54
ASE_00204	RNaseP_bact_b links to Rfam database...	0.38	0.32	0.45	36	67816	48	12	32	4	76
ASE_00205	RNaseP_arch links to Rfam database...	0.19	0.18	0.20	16	45976	65	6	58	1	74
ASE_00209	RNaseP_arch links to Rfam database...	0.29	0.25	0.33	22	43004	45	2	43	0	66
ASE_00210	RNaseP_arch links to Rfam database...	0.10	0.09	0.11	6	27207	50	7	41	2	59
ASE_00212	RNaseP_bact_a links to Rfam database...	0.33	0.29	0.39	43	93850	70	5	63	2	105
ASE_00213	RNaseP_arch links to Rfam database...	0.32	0.30	0.34	20	27203	40	10	28	2	46
ASE_00214	RNaseP_bact_a links to Rfam database...	0.63	0.57	0.69	59	56194	32	2	25	5	44
ASE_00215	RNaseP_bact_a links to Rfam database...	0.47	0.41	0.53	41	48438	38	7	30	1	58
ASE_00216	RNaseP_bact_a links to Rfam database...	0.58	0.54	0.63	44	39270	27	0	26	1	38
ASE_00217	RNaseP_bact_a links to Rfam database...	0.24	0.21	0.28	19	40402	50	4	45	1	71
ASE_00221	RNaseP_bact_a links to Rfam database...	0.38	0.32	0.44	38	64533	49	3	46	0	79
ASE_00227	RNaseP_bact_a links to Rfam database...	0.38	0.33	0.44	44	78904	55	3	52	0	89
ASE_00228	RNaseP_bact_a links to Rfam database...	0.35	0.33	0.37	28	46896	49	13	34	2	58
ASE_00229	RNaseP_bact_a links to Rfam database...	0.58	0.52	0.64	45	42416	27	1	24	2	42
ASE_00231	RNaseP_bact_a links to Rfam database...	0.66	0.63	0.71	60	47810	25	8	17	0	36
ASE_00232	RNaseP_bact_a links to Rfam database...	0.47	0.44	0.50	37	38429	37	6	31	0	47
ASE_00234	RNaseP_bact_a links to Rfam database...	0.32	0.26	0.40	33	75384	49	2	47	0	96
ASE_00237	RNaseP_nuc links to Rfam database...	0.33	0.38	0.30	21	45683	62	15	34	13	35
ASE_00238	RNaseP_bact_a links to Rfam database...	0.34	0.31	0.39	35	64171	55	3	52	0	79
ASE_00240	RNaseP_bact_a links to Rfam database...	0.29	0.26	0.33	24	46593	49	2	46	1	69
ASE_00241	RNaseP_bact_a links to Rfam database...	0.35	0.31	0.40	27	43889	44	8	32	4	60
ASE_00242	RNaseP_bact_a links to Rfam database...	0.47	0.43	0.53	48	60984	43	4	39	0	64
ASE_00246	RNaseP_nuc links to Rfam database...	0.28	0.27	0.29	18	48142	61	11	34	16	49
ASE_00247	RNaseP_nuc links to Rfam database...	0.35	0.34	0.35	22	54222	70	14	27	29	42
ASE_00248	RNaseP_bact_a links to Rfam database...	0.41	0.36	0.48	41	62395	48	1	44	3	73
ASE_00250	RNaseP_bact_a links to Rfam database...	0.47	0.43	0.53	56	78897	53	6	44	3	75
ASE_00254	RNaseP_bact_a links to Rfam database...	0.34	0.30	0.38	25	36790	46	4	37	5	57
ASE_00255	RNaseP_bact_a links to Rfam database...	0.33	0.29	0.38	38	74591	62	9	53	0	92
ASE_00257	RNaseP_bact_a links to Rfam database...	0.54	0.47	0.62	46	50966	28	2	26	0	51
ASE_00259	RNaseP_bact_a links to Rfam database...	0.37	0.33	0.41	40	73056	58	7	50	1	81
ASE_00263	RNaseP_bact_a links to Rfam database...	0.37	0.33	0.40	40	70401	59	6	53	0	80
ASE_00264	RNaseP_nuc links to Rfam database...	0.26	0.25	0.28	25	49051	68	2	63	3	75
ASE_00267	RNaseP_bact_a links to Rfam database...	0.38	0.34	0.43	30	45081	47	3	36	8	58
ASE_00270	RNaseP_bact_a links to Rfam database...	0.39	0.36	0.43	46	72283	61	4	57	0	82
ASE_00274	RNaseP_bact_a links to Rfam database...	0.38	0.34	0.42	35	55527	49	4	45	0	68
ASE_00277	RNaseP_bact_a links to Rfam database...	0.31	0.29	0.33	26	48127	52	8	44	0	65
ASE_00279	RNaseP_bact_a links to Rfam database...	0.26	0.23	0.31	23	53226	53	4	48	1	78
ASE_00280	RNaseP_bact_a links to Rfam database...	0.60	0.55	0.65	54	51920	29	1	28	0	44
ASE_00281	RNaseP_bact_a links to Rfam database...	0.60	0.51	0.71	45	44488	23	0	18	5	43
ASE_00282	RNaseP_bact_a links to Rfam database...	0.40	0.35	0.46	45	77717	53	6	47	0	82
ASE_00283	RNaseP_bact_a links to Rfam database...	0.41	0.36	0.48	38	61697	41	3	38	0	69
ASE_00284	RNaseP_bact_a links to Rfam database...	0.20	0.18	0.22	19	58225	67	1	66	0	89
ASE_00285	RNaseP_bact_a links to Rfam database...	0.49	0.43	0.56	52	68913	41	1	40	0	70
ASE_00286	RNaseP_bact_a links to Rfam database...	0.45	0.40	0.51	37	46592	40	4	32	4	55
ASE_00287	RNaseP_bact_a links to Rfam database...	0.40	0.34	0.47	35	54872	41	0	39	2	68
ASE_00288	RNaseP_bact_a links to Rfam database...	0.52	0.47	0.57	44	45979	33	6	27	0	49
ASE_00291	-	0.39	0.34	0.45	32	48445	44	1	38	5	62
ASE_00292	RNaseP_bact_a links to Rfam database...	0.48	0.41	0.56	56	81710	46	2	42	2	82
ASE_00295	RNaseP_bact_a links to Rfam database...	0.40	0.35	0.46	46	73821	55	1	52	2	85
ASE_00296	RNaseP_bact_a links to Rfam database...	0.43	0.38	0.48	55	91692	59	2	57	0	90
ASE_00297	RNaseP_bact_a links to Rfam database...	0.50	0.47	0.53	46	52889	40	3	37	0	52
ASE_00298	RNaseP_bact_a links to Rfam database...	0.38	0.33	0.44	37	67443	51	0	48	3	76
ASE_00299	RNaseP_bact_a links to Rfam database...	0.28	0.26	0.30	26	49368	61	8	53	0	74
ASE_00313	RNaseP_nuc links to Rfam database...	0.35	0.33	0.37	29	62403	66	11	38	17	60
ASE_00318	RNaseP_bact_b links to Rfam database...	0.38	0.35	0.41	41	80101	61	5	53	3	77
ASE_00327	RNaseP_nuc links to Rfam database...	0.36	0.34	0.39	30	57215	57	4	42	11	59
ASE_00328	RNaseP_bact_b links to Rfam database...	0.43	0.39	0.48	44	72679	54	4	44	6	68
ASE_00330	RNaseP_nuc links to Rfam database...	0.30	0.28	0.33	25	56204	62	4	47	11	65
ASE_00332	RNaseP_bact_a links to Rfam database...	0.43	0.39	0.48	54	81698	59	2	56	1	84
ASE_00335	RNaseP_bact_b links to Rfam database...	0.35	0.32	0.39	37	75372	61	4	53	4	79
ASE_00337	RNaseP_nuc links to Rfam database...	0.47	0.48	0.47	34	39268	45	7	31	7	37
ASE_00338	RNaseP_nuc links to Rfam database...	0.28	0.27	0.31	26	66345	73	12	47	14	72
ASE_00339	RNaseP_bact_a links to Rfam database...	0.38	0.34	0.42	41	80103	57	7	49	1	78
ASE_00340	RNaseP_bact_a links to Rfam database...	0.43	0.38	0.48	32	45990	34	9	25	0	53
ASE_00342	RNaseP_bact_a links to Rfam database...	0.40	0.35	0.45	40	62393	49	0	48	1	75
ASE_00343	RNaseP_bact_a links to Rfam database...	0.43	0.41	0.46	46	83336	61	5	49	7	67
ASE_00346	RNaseP_arch links to Rfam database...	0.23	0.21	0.26	20	48128	58	3	54	1	77
ASE_00353	RNaseP_bact_a links to Rfam database...	0.57	0.54	0.61	58	57875	37	6	31	0	49
ASE_00359	RNaseP_arch links to Rfam database...	0.36	0.34	0.39	27	42708	43	4	39	0	53
ASE_00360	RNaseP_arch links to Rfam database...	0.20	0.20	0.21	13	29342	50	10	38	2	52
ASE_00361	RNaseP_bact_a links to Rfam database...	0.37	0.32	0.43	41	75371	54	2	52	0	86
ASE_00362	RNaseP_bact_a links to Rfam database...	0.54	0.52	0.57	47	48123	35	5	30	0	44
ASE_00363	RNaseP_bact_a links to Rfam database...	0.50	0.46	0.54	43	51281	42	6	30	6	51
ASE_00364	RNaseP_bact_a links to Rfam database...	0.37	0.34	0.40	36	54195	54	3	51	0	69
ASE_00366	RNaseP_bact_a links to Rfam database...	0.34	0.33	0.35	32	58562	59	8	51	0	66
ASE_00367	RNaseP_bact_a links to Rfam database...	0.30	0.27	0.33	23	43001	51	5	42	4	63
ASE_00369	RNaseP_bact_a links to Rfam database...	0.54	0.49	0.60	52	55859	37	1	33	3	55
ASE_00370	RNaseP_bact_a links to Rfam database...	0.41	0.37	0.46	31	41837	42	5	32	5	53
ASE_00372	RNaseP_bact_a links to Rfam database...	0.44	0.40	0.48	40	51919	49	1	43	5	60
ASE_00374	RNaseP_bact_a links to Rfam database...	0.45	0.41	0.50	36	44778	38	4	32	2	52
ASE_00375	RNaseP_bact_a links to Rfam database...	0.61	0.55	0.67	61	60287	36	1	29	6	49
ASE_00376	RNaseP_bact_a links to Rfam database...	0.59	0.53	0.66	56	56868	33	4	25	4	49
ASE_00377	RNaseP_bact_a links to Rfam database...	0.67	0.63	0.73	67	57538	29	3	22	4	40
ASE_00379	RNaseP_bact_a links to Rfam database...	0.33	0.30	0.36	27	45981	50	7	41	2	62
ASE_00380	RNaseP_bact_a links to Rfam database...	0.56	0.52	0.61	51	54863	34	7	25	2	48
ASE_00382	RNaseP_bact_a links to Rfam database...	0.63	0.56	0.71	47	41839	25	0	19	6	37
ASE_00383	RNaseP_bact_a links to Rfam database...	0.47	0.43	0.51	45	54527	45	1	42	2	60
ASE_00384	RNaseP_bact_a links to Rfam database...	0.53	0.47	0.61	43	48445	36	2	26	8	49
ASE_00385	RNaseP_bact_a links to Rfam database...	0.39	0.32	0.48	26	41851	28	6	22	0	55
ASE_00386	RNaseP_bact_a links to Rfam database...	0.43	0.39	0.47	37	50325	46	7	34	5	59
ASE_00387	RNaseP_bact_a links to Rfam database...	0.40	0.37	0.44	38	55858	49	8	41	0	66
ASE_00388	RNaseP_bact_a links to Rfam database...	0.49	0.44	0.55	39	45682	39	1	31	7	50
ASE_00390	RNaseP_bact_a links to Rfam database...	0.43	0.38	0.48	32	42129	39	3	31	5	53
ASE_00393	RNaseP_bact_a links to Rfam database...	0.34	0.30	0.39	28	47824	49	1	42	6	65
ASE_00394	RNaseP_bact_a links to Rfam database...	0.37	0.32	0.42	30	46899	45	2	40	3	63
ASE_00395	RNaseP_bact_a links to Rfam database...	0.43	0.39	0.48	33	41547	42	3	33	6	51
ASE_00396	RNaseP_bact_a links to Rfam database...	0.45	0.42	0.49	35	41544	40	7	30	3	48
ASE_00397	RNaseP_bact_a links to Rfam database...	0.34	0.31	0.38	33	54528	55	4	50	1	72
ASE_00398	RNaseP_bact_a links to Rfam database...	0.56	0.50	0.62	52	55861	35	5	27	3	52
ASE_00400	RNaseP_bact_a links to Rfam database...	0.51	0.47	0.56	50	57881	43	4	35	4	56
ASE_00401	RNaseP_bact_a links to Rfam database...	0.51	0.48	0.54	60	76917	51	4	47	0	66
ASE_00402	RNaseP_bact_a links to Rfam database...	0.39	0.34	0.44	29	42420	39	5	32	2	56
ASE_00403	RNaseP_bact_a links to Rfam database...	0.31	0.27	0.36	29	55864	57	1	51	5	78
ASE_00404	RNaseP_bact_a links to Rfam database...	0.28	0.26	0.31	22	43000	53	7	42	4	63
ASE_00406	RNaseP_bact_a links to Rfam database...	0.69	0.63	0.77	59	48751	24	0	18	6	35
ASE_00408	-	0.31	0.27	0.35	19	32331	35	1	34	0	52
ASE_00409	-	0.48	0.45	0.53	37	40971	33	1	32	0	46
ASE_00411	RNaseP_bact_a links to Rfam database...	0.37	0.34	0.40	30	49380	50	5	40	5	59
ASE_00412	RNaseP_bact_a links to Rfam database...	0.43	0.38	0.48	40	58228	43	5	38	0	65
ASE_00413	RNaseP_bact_a links to Rfam database...	0.60	0.58	0.62	47	44475	35	8	21	6	34
ASE_00414	RNaseP_bact_a links to Rfam database...	0.33	0.29	0.37	28	46284	54	4	44	6	67
ASE_00415	RNaseP_bact_a links to Rfam database...	0.39	0.34	0.45	35	54868	46	0	43	3	68
ASE_00416	RNaseP_bact_a links to Rfam database...	0.40	0.35	0.45	45	77321	55	2	53	0	82
ASE_00417	RNaseP_arch links to Rfam database...	0.46	0.44	0.47	44	54522	50	3	46	1	56
ASE_00418	RNaseP_arch links to Rfam database...	0.29	0.27	0.32	20	38719	44	0	42	2	55
ASE_00419	RNaseP_bact_a links to Rfam database...	0.65	0.60	0.70	62	54858	27	3	23	1	41
ASE_00422	RNaseP_bact_a links to Rfam database...	0.71	0.64	0.79	60	46895	21	1	15	5	34
ASE_00423	RNaseP_bact_a links to Rfam database...	0.61	0.56	0.66	61	56860	32	6	26	0	48
ASE_00426	RNaseP_bact_a links to Rfam database...	0.34	0.31	0.38	33	60988	54	5	49	0	75
ASE_00428	RNaseP_bact_a links to Rfam database...	0.26	0.23	0.29	29	76537	70	2	68	0	96
ASE_00429	-	0.23	0.21	0.25	14	28147	47	4	38	5	52
ASE_00430	RNaseP_bact_a links to Rfam database...	0.75	0.67	0.83	65	46893	18	1	12	5	32
ASE_00431	RNaseP_bact_a links to Rfam database...	0.31	0.26	0.37	25	46292	43	6	37	0	70
ASE_00434	RNaseP_bact_b links to Rfam database...	0.36	0.34	0.38	37	68167	64	11	50	3	73
ASE_00437	RNaseP_bact_a links to Rfam database...	0.40	0.34	0.46	46	79302	53	2	51	0	89
ASE_00438	RNaseP_bact_a links to Rfam database...	0.39	0.34	0.46	39	65982	45	0	45	0	77
ASE_00441	RNaseP_bact_a links to Rfam database...	0.36	0.32	0.41	36	64173	52	0	52	0	76
ASE_00447	RNaseP_bact_a links to Rfam database...	0.35	0.29	0.43	34	60298	47	1	45	1	82
ASE_00448	RNaseP_bact_a links to Rfam database...	0.28	0.26	0.30	29	64164	68	6	62	0	83
ASE_00451	RNaseP_bact_a links to Rfam database...	0.38	0.34	0.43	42	70778	56	3	53	0	83
CRW_00016	Intron_gpI links to Rfam database...	0.53	0.46	0.61	55	77331	44	4	31	9	65
CRW_00608	-	0.25	0.23	0.28	18	35713	47	12	35	0	61
CRW_00610	Intron_gpI links to Rfam database...	0.40	0.36	0.46	29	36252	37	5	29	3	52
CRW_00611	-	0.77	0.68	0.86	51	31316	8	3	5	0	24
CRW_00613	Intron_gpI links to Rfam database...	0.48	0.42	0.54	33	34919	34	2	26	6	45
CRW_00618	Intron_gpI links to Rfam database...	0.33	0.31	0.35	19	56225	57	6	30	21	42
CRW_00629	-	0.35	0.33	0.38	40	91273	69	1	64	4	82
CRW_00632	-	0.50	0.48	0.53	61	82912	58	6	49	3	67
CRW_00633	Intron_gpI links to Rfam database...	0.38	0.35	0.42	37	63457	52	6	46	0	69
CRW_00634	Intron_gpI links to Rfam database...	0.29	0.28	0.30	26	64533	68	8	53	7	68
CRW_00641	-	0.35	0.33	0.37	25	39836	47	3	39	5	51
CRW_00642	-	0.59	0.60	0.58	39	47211	44	8	20	16	26
CRW_00645	-	0.52	0.49	0.55	33	35451	35	7	20	8	34
CRW_00646	-	0.48	0.44	0.53	28	34927	39	2	23	14	36
CRW_00651	-	0.39	0.37	0.41	45	100018	70	13	52	5	76
CRW_00653	-	0.56	0.54	0.59	72	94707	52	3	48	1	62
CRW_00654	-	0.67	0.62	0.73	77	78104	30	3	26	1	47
CRW_00655	-	0.61	0.56	0.67	70	89148	36	3	32	1	54
CRW_00656	-	0.15	0.14	0.16	18	90413	95	13	81	1	111
CRW_00658	-	0.31	0.27	0.34	28	74609	60	3	51	6	74
CRW_00659	-	0.29	0.31	0.28	19	32317	49	14	35	0	42
CRW_00660	-	0.59	0.58	0.59	35	22096	25	6	18	1	25
CRW_00661	-	0.09	0.10	0.09	5	24256	51	15	34	2	46
CRW_00662	-	0.15	0.15	0.14	10	28611	61	6	53	2	55
CRW_00663	-	0.17	0.16	0.19	10	26053	47	2	41	4	51
CRW_00664	-	0.21	0.21	0.21	16	53551	71	10	51	10	62
CRW_00665	-	0.08	0.08	0.08	4	23605	45	9	35	1	44
CRW_00666	-	0.17	0.15	0.19	19	96043	86	5	74	7	107
CRW_00669	-	0.39	0.36	0.42	43	97359	71	6	53	12	76
CRW_00670	Intron_gpI links to Rfam database...	0.37	0.34	0.41	41	70025	60	3	56	1	79
CRW_00671	Intron_gpI links to Rfam database...	0.55	0.50	0.60	59	62736	40	2	38	0	58
CRW_00672	Intron_gpI links to Rfam database...	0.30	0.29	0.32	32	72291	71	14	53	4	79
CRW_00673	-	0.36	0.36	0.35	38	100020	84	21	49	14	67
CRW_00674	Intron_gpI links to Rfam database...	0.29	0.26	0.33	32	83339	67	8	57	2	92
CRW_00676	Intron_gpI links to Rfam database...	0.34	0.34	0.34	39	93413	80	20	56	4	76
CRW_00677	-	0.41	0.39	0.42	41	71913	61	12	44	5	64
CRW_00679	-	0.32	0.29	0.34	31	76546	65	6	53	6	76
CRW_00686	-	0.43	0.41	0.46	51	95156	64	8	51	5	74
CRW_00687	-	0.32	0.30	0.33	20	28620	43	8	32	3	46
CRW_00688	-	0.72	0.70	0.74	40	21891	17	5	9	3	17
CRW_00689	-	0.45	0.43	0.46	33	33599	42	9	29	4	44
CRW_00690	-	0.22	0.20	0.24	14	33353	48	7	37	4	55
CRW_00691	-	0.57	0.57	0.58	38	27196	28	2	25	1	29
CRW_00692	Intron_gpI links to Rfam database...	0.26	0.24	0.28	22	68555	62	20	38	4	68
CRW_00693	-	0.33	0.31	0.35	38	89145	74	7	63	4	84
CRW_00694	-	0.35	0.32	0.38	39	85801	68	7	58	3	83
CRW_00699	-	0.30	0.29	0.32	36	91692	78	6	72	0	90
CRW_00703	-	0.24	0.23	0.25	15	40410	50	5	40	5	51
CRW_00715	-	0.52	0.48	0.57	50	69291	38	3	34	1	54
CRW_00721	-	0.27	0.25	0.28	17	58593	63	7	36	20	51
PDB_00005	Tymo_tRNA-like links to Rfam database...	0.84	0.71	1.00	10	936	0	0	0	0	4
PDB_00018	-	0.20	0.20	0.22	4	1017	14	2	12	0	16
PDB_00020	-	0.46	0.35	0.64	7	769	4	0	4	0	13
PDB_00041	-	0.70	0.50	1.00	6	624	0	0	0	0	6
PDB_00053	-	0.73	0.55	1.00	6	429	0	0	0	0	5
PDB_00056	-	-0.02	0.00	0.00	0	618	12	0	12	0	16
PDB_00078	-	0.42	0.38	0.47	44	49677	49	6	43	0	71
PDB_00123	-	0.35	0.33	0.38	12	4154	20	0	20	0	24
PDB_00124	-	0.59	0.50	0.71	5	489	2	0	2	0	5
PDB_00128	-	0.17	0.14	0.25	2	488	6	1	5	0	12
PDB_00134	-	0.79	0.63	1.00	5	373	0	0	0	0	3
PDB_00138	-	0.79	0.63	1.00	5	373	0	0	0	0	3
PDB_00209	-	0.56	0.45	0.71	5	554	2	0	2	0	6
PDB_00243	-	0.76	0.58	1.00	7	623	0	0	0	0	5
PDB_00278	-	0.47	0.43	0.53	31	24917	28	2	26	0	41
PDB_00352	-	0.89	0.79	1.00	15	1210	0	0	0	0	4
PDB_00370	-	0.00	0.00	0.00	0	15188	37	15	22	0	25
PDB_00423	-	0.68	0.59	0.77	44	26739	13	1	12	0	30
PDB_00447	-	0.28	0.23	0.34	10	7111	19	2	17	0	34
PDB_00571	tRNA links to Rfam database...	0.87	0.80	0.95	20	3300	1	1	0	0	5
PDB_00701	-	0.15	0.14	0.17	15	45365	72	7	64	1	94
PDB_00713	-	0.47	0.43	0.53	9	1999	8	0	8	0	12
PDB_00716	HDV_ribozyme links to Rfam database...	0.17	0.17	0.18	4	2679	19	0	18	1	19
PDB_00747	-	0.58	0.49	0.70	39	24475	18	1	16	1	41
PDB_00804	-	0.41	0.38	0.45	19	15358	25	0	23	2	31
PDB_00827	Intron_gpI links to Rfam database...	0.65	0.54	0.79	44	26972	13	0	12	1	37
PDB_00828	Purine links to Rfam database...	0.86	0.74	1.00	20	2465	0	0	0	0	7
PDB_00829	Purine links to Rfam database...	0.86	0.75	1.00	18	2260	0	0	0	0	6
PDB_00842	-	0.79	0.63	1.00	5	373	0	0	0	0	3
PDB_00851	-	0.56	0.44	0.72	18	4728	7	0	7	0	23
PDB_00857	-	0.77	0.60	1.00	9	1072	0	0	0	0	6
PDB_00874	-	-0.01	0.00	0.00	0	936	10	0	10	0	20
PDB_00886	-	-0.01	0.00	0.00	0	4152	34	0	34	0	40
PDB_00917	-	0.64	0.58	0.71	55	35168	30	4	18	8	40
PDB_00918	-	0.75	0.57	1.00	4	321	0	0	0	0	3
PDB_00919	RNaseP_bact_a links to Rfam database...	0.29	0.24	0.36	25	44183	45	2	43	0	78
PDB_01009	tRNA links to Rfam database...	0.90	0.90	0.90	19	2464	3	0	2	1	2
PDB_01020	Purine links to Rfam database...	0.86	0.74	1.00	17	2261	1	0	0	1	6
PDB_01040	-	0.30	0.30	0.33	6	1110	12	0	12	0	14
PDB_01059	-	0.65	0.43	1.00	3	228	0	0	0	0	4
PDB_01070	-	0.43	0.37	0.50	20	12680	20	0	20	0	34
PDB_01073	SAM links to Rfam database...	0.55	0.47	0.64	16	4346	10	0	9	1	18
PDB_01092	glmS links to Rfam database...	0.66	0.58	0.77	30	10114	10	2	7	1	22
PDB_01129	-	0.13	0.13	0.13	9	35442	64	14	46	4	62
PDB_01157	-	0.32	0.30	0.34	29	50001	56	15	41	0	69
PDB_01194	-	0.44	0.33	0.63	5	488	3	1	2	0	10
PDB_01201	-	0.79	0.64	1.00	14	1114	0	0	0	0	8
PDB_01203	-	0.73	0.63	0.86	12	1162	2	2	0	0	7
PDB_01250	-	0.00	0.00	0.00	0	12061	32	1	28	3	41
PDB_01260	-	0.58	0.44	0.79	11	1816	3	0	3	0	14
PDB_01281	-	-0.03	0.00	0.00	0	366	12	0	12	0	14
PDB_01299	-	0.74	0.67	0.83	10	891	2	1	1	0	5
PDB_01309	-	-0.01	0.00	0.00	0	9124	56	12	44	0	39
RFA_00597	Telomerase-vert links to Rfam database...	0.15	0.15	0.15	16	97796	96	11	80	5	93
RFA_00598	Telomerase-vert links to Rfam database...	0.14	0.13	0.14	13	84576	88	14	63	11	88
RFA_00601	Telomerase-vert links to Rfam database...	0.10	0.11	0.11	12	99122	105	21	80	4	102
RFA_00632	HDV_ribozyme links to Rfam database...	0.36	0.36	0.37	10	4068	17	3	14	0	18
RFA_00636	HDV_ribozyme links to Rfam database...	0.58	0.57	0.59	16	3978	11	1	10	0	12
RFA_00767	Corona_pk3 links to Rfam database...	-0.01	0.00	0.00	0	1878	13	1	12	0	18
RFA_00768	Corona_pk3 links to Rfam database...	-0.01	0.00	0.00	0	1875	16	1	15	0	18
RFA_00769	Corona_pk3 links to Rfam database...	0.50	0.50	0.50	9	1935	9	4	5	0	9
RFA_00770	Corona_pk3 links to Rfam database...	-0.01	0.00	0.00	0	2003	15	2	11	2	18
RFA_00773	Corona_pk3 links to Rfam database...	-0.01	0.00	0.00	0	1936	19	1	16	2	18
RFA_00779	Corona_pk3 links to Rfam database...	0.65	0.56	0.77	10	1940	3	2	1	0	8
RFA_00808	RydC links to Rfam database...	0.62	0.56	0.69	9	2003	4	3	1	0	7
RFA_00809	RydC links to Rfam database...	0.40	0.38	0.43	6	2131	8	1	7	0	10
TMR_00007	tmRNA links to Rfam database...	0.18	0.16	0.20	17	61691	73	7	61	5	91
TMR_00008	tmRNA links to Rfam database...	0.33	0.32	0.35	34	65969	70	9	54	7	72
TMR_00010	tmRNA links to Rfam database...	0.15	0.15	0.16	14	57885	71	7	64	0	82
TMR_00012	tmRNA links to Rfam database...	0.23	0.22	0.23	18	64542	76	13	47	16	63
TMR_00014	tmRNA links to Rfam database...	0.29	0.27	0.31	30	68539	73	4	62	7	80
TMR_00017	tmRNA links to Rfam database...	0.33	0.29	0.37	30	67080	55	4	47	4	72
TMR_00018	tmRNA links to Rfam database...	0.24	0.23	0.25	21	64536	67	11	52	4	71
TMR_00028	tmRNA links to Rfam database...	0.14	0.13	0.14	13	62743	80	12	67	1	84
TMR_00030	tmRNA links to Rfam database...	0.32	0.31	0.34	34	75756	69	13	52	4	77
TMR_00034	tmRNA links to Rfam database...	0.34	0.31	0.37	34	59938	66	3	56	7	76
TMR_00035	tmRNA links to Rfam database...	0.41	0.40	0.43	39	67806	56	16	35	5	59
TMR_00036	tmRNA links to Rfam database...	0.23	0.21	0.27	21	90446	83	7	51	25	80
TMR_00038	tmRNA links to Rfam database...	0.37	0.35	0.40	39	71155	62	14	45	3	71
TMR_00042	tmRNA links to Rfam database...	0.20	0.18	0.22	18	62753	67	12	52	3	80
TMR_00046	tmRNA links to Rfam database...	0.25	0.25	0.26	24	62741	75	15	55	5	72
TMR_00047	tmRNA links to Rfam database...	0.09	0.09	0.09	5	48459	67	14	38	15	52
TMR_00048	tmRNA links to Rfam database...	0.23	0.22	0.24	21	64894	71	14	51	6	74
TMR_00049	tmRNA links to Rfam database...	0.10	0.09	0.10	8	63111	75	14	57	4	79
TMR_00051	tmRNA links to Rfam database...	0.42	0.40	0.44	38	65617	54	10	38	6	56
TMR_00055	tmRNA links to Rfam database...	0.22	0.21	0.24	24	78902	80	16	61	3	90
TMR_00057	tmRNA links to Rfam database...	0.11	0.11	0.10	9	73831	92	15	65	12	70
TMR_00061	tmRNA links to Rfam database...	0.00	0.00	0.00	0	59607	85	4	74	7	99
TMR_00062	tmRNA links to Rfam database...	0.22	0.21	0.23	22	78511	77	13	60	4	82
TMR_00064	tmRNA links to Rfam database...	0.19	0.18	0.20	19	76932	77	24	53	0	84
TMR_00065	tmRNA links to Rfam database...	0.07	0.07	0.09	7	76554	78	16	59	3	99
TMR_00067	tmRNA links to Rfam database...	0.35	0.33	0.37	38	82113	70	6	58	6	76
TMR_00073	tmRNA links to Rfam database...	0.28	0.25	0.32	29	65612	62	5	57	0	88
TMR_00076	tmRNA links to Rfam database...	0.31	0.29	0.34	29	70790	62	11	46	5	71
TMR_00080	tmRNA links to Rfam database...	0.14	0.14	0.14	13	70410	79	15	62	2	83
TMR_00081	tmRNA links to Rfam database...	0.23	0.21	0.26	22	67076	63	9	54	0	84
TMR_00082	tmRNA links to Rfam database...	0.24	0.23	0.26	22	67811	65	9	54	2	74
TMR_00083	tmRNA links to Rfam database...	0.34	0.31	0.37	33	68175	61	2	55	4	72
TMR_00092	tmRNA links to Rfam database...	0.23	0.23	0.24	23	67433	76	16	56	4	78
TMR_00093	tmRNA links to Rfam database...	0.25	0.24	0.27	24	64171	71	10	56	5	78
TMR_00096	tmRNA links to Rfam database...	0.11	0.10	0.12	10	64894	81	13	63	5	90
TMR_00101	tmRNA links to Rfam database...	0.31	0.29	0.34	31	64169	66	13	48	5	76
TMR_00102	tmRNA links to Rfam database...	0.29	0.28	0.31	28	64171	68	6	56	6	73
TMR_00103	tmRNA links to Rfam database...	0.30	0.30	0.31	32	64157	73	6	66	1	76
TMR_00104	-	0.23	0.24	0.22	17	66719	69	19	40	10	53
TMR_00106	tmRNA links to Rfam database...	0.32	0.30	0.33	36	89992	73	15	57	1	84
TMR_00109	tmRNA links to Rfam database...	0.15	0.13	0.16	16	88312	87	11	71	5	106
TMR_00111	tmRNA links to Rfam database...	0.26	0.23	0.30	28	90433	72	5	59	8	94
TMR_00116	tmRNA links to Rfam database...	0.32	0.28	0.37	29	64902	61	5	44	12	75
TMR_00117	tmRNA links to Rfam database...	0.17	0.15	0.18	18	80102	89	6	74	9	100
TMR_00118	tmRNA links to Rfam database...	0.15	0.15	0.16	18	81294	101	9	85	7	102
TMR_00119	tmRNA links to Rfam database...	0.22	0.21	0.23	22	71916	76	15	57	4	82
TMR_00123	tmRNA links to Rfam database...	0.35	0.33	0.38	33	66344	58	7	46	5	68
TMR_00124	tmRNA links to Rfam database...	0.27	0.27	0.28	26	70408	71	7	59	5	72
TMR_00125	tmRNA links to Rfam database...	0.26	0.24	0.28	24	64174	67	12	51	4	75
TMR_00127	tmRNA links to Rfam database...	0.31	0.30	0.33	29	62748	64	10	48	6	68
TMR_00128	tmRNA links to Rfam database...	0.44	0.41	0.48	39	60993	49	5	38	6	57
TMR_00131	tmRNA links to Rfam database...	0.38	0.35	0.40	35	64893	59	7	45	7	64
TMR_00135	tmRNA links to Rfam database...	0.31	0.28	0.35	28	62754	60	8	45	7	71
TMR_00136	tmRNA links to Rfam database...	0.30	0.29	0.32	29	74601	67	9	52	6	72
TMR_00137	tmRNA links to Rfam database...	0.08	0.08	0.09	7	60996	81	8	64	9	82
TMR_00139	tmRNA links to Rfam database...	0.26	0.26	0.25	24	62033	76	19	52	5	67
TMR_00140	tmRNA links to Rfam database...	0.23	0.21	0.26	21	73838	75	10	51	14	79
TMR_00142	tmRNA links to Rfam database...	0.09	0.09	0.10	9	70782	92	13	72	7	93
TMR_00143	tmRNA links to Rfam database...	0.39	0.34	0.44	35	64541	54	5	39	10	68
TMR_00144	tmRNA links to Rfam database...	0.09	0.09	0.09	9	74205	94	16	75	3	94
TMR_00146	tmRNA links to Rfam database...	0.26	0.26	0.26	11	32089	52	11	20	21	31
TMR_00150	tmRNA links to Rfam database...	0.14	0.12	0.16	5	43040	57	2	24	31	37
TMR_00152	tmRNA links to Rfam database...	0.09	0.08	0.10	9	81316	90	11	70	9	106
TMR_00155	tmRNA links to Rfam database...	0.33	0.29	0.38	30	61696	56	2	48	6	74
TMR_00156	tmRNA links to Rfam database...	0.28	0.27	0.30	26	60290	66	12	50	4	71
TMR_00158	tmRNA links to Rfam database...	0.33	0.30	0.37	30	60645	55	9	42	4	69
TMR_00159	tmRNA links to Rfam database...	0.30	0.28	0.32	26	62047	60	12	43	5	66
TMR_00160	tmRNA links to Rfam database...	0.29	0.27	0.31	26	64536	66	13	45	8	69
TMR_00164	tmRNA links to Rfam database...	0.35	0.30	0.40	32	66715	56	3	45	8	74
TMR_00165	tmRNA links to Rfam database...	0.21	0.20	0.22	19	61690	74	7	60	7	78
TMR_00166	tmRNA links to Rfam database...	0.29	0.27	0.31	27	61689	66	6	54	6	74
TMR_00168	tmRNA links to Rfam database...	0.51	0.45	0.57	51	60986	38	2	36	0	63
TMR_00173	tmRNA links to Rfam database...	0.32	0.33	0.32	14	42151	66	10	20	36	28
TMR_00179	tmRNA links to Rfam database...	0.22	0.20	0.25	20	67081	71	6	54	11	78
TMR_00180	tmRNA links to Rfam database...	0.32	0.31	0.34	31	67069	67	19	42	6	68
TMR_00182	tmRNA links to Rfam database...	0.16	0.15	0.17	15	66344	75	12	59	4	87
TMR_00183	tmRNA links to Rfam database...	0.22	0.20	0.24	21	63101	73	9	59	5	82
TMR_00184	tmRNA links to Rfam database...	0.25	0.23	0.27	23	63105	71	10	52	9	79
TMR_00193	tmRNA links to Rfam database...	0.24	0.24	0.25	19	59264	64	13	44	7	61
TMR_00194	tmRNA links to Rfam database...	0.31	0.28	0.34	26	62759	57	8	42	7	67
TMR_00196	tmRNA links to Rfam database...	0.35	0.33	0.37	32	60988	60	14	41	5	65
TMR_00199	tmRNA links to Rfam database...	0.19	0.20	0.20	18	62743	79	26	48	5	74
TMR_00200	-	0.37	0.36	0.38	27	41545	50	8	36	6	48
TMR_00204	tmRNA links to Rfam database...	0.22	0.21	0.25	20	60297	69	10	51	8	77
TMR_00207	tmRNA links to Rfam database...	0.17	0.17	0.18	17	72293	85	16	64	5	86
TMR_00223	tmRNA links to Rfam database...	0.21	0.20	0.22	19	64173	73	14	55	4	76
TMR_00224	tmRNA links to Rfam database...	0.19	0.17	0.21	17	64900	68	9	54	5	84
TMR_00226	tmRNA links to Rfam database...	0.25	0.23	0.27	24	69661	72	12	54	6	81
TMR_00227	tmRNA links to Rfam database...	0.21	0.21	0.22	21	70030	77	12	62	3	80
TMR_00228	tmRNA links to Rfam database...	0.20	0.19	0.21	20	88314	85	12	64	9	88
TMR_00234	tmRNA links to Rfam database...	0.21	0.20	0.23	20	58910	73	12	54	7	82
TMR_00238	tmRNA links to Rfam database...	0.37	0.38	0.37	38	84562	74	16	50	8	63
TMR_00239	tmRNA links to Rfam database...	0.34	0.32	0.35	31	61688	57	6	51	0	65
TMR_00240	tmRNA links to Rfam database...	0.27	0.27	0.27	23	63104	66	15	48	3	62
TMR_00246	-	0.23	0.24	0.24	8	78176	94	5	21	68	26
TMR_00248	tmRNA links to Rfam database...	0.27	0.29	0.25	11	54241	70	14	19	37	27
TMR_00257	tmRNA links to Rfam database...	0.10	0.09	0.11	9	67077	79	7	68	4	89
TMR_00259	tmRNA links to Rfam database...	0.18	0.16	0.20	16	67817	64	8	55	1	87
TMR_00261	tmRNA links to Rfam database...	0.34	0.33	0.35	33	66701	65	11	50	4	68
TMR_00262	tmRNA links to Rfam database...	0.27	0.25	0.29	26	74214	69	16	49	4	78
TMR_00271	tmRNA links to Rfam database...	0.21	0.19	0.23	17	64188	64	6	50	8	74
TMR_00274	tmRNA links to Rfam database...	0.35	0.31	0.39	33	66711	57	6	45	6	72
TMR_00278	tmRNA links to Rfam database...	0.13	0.13	0.14	13	67803	88	11	69	8	89
TMR_00279	tmRNA links to Rfam database...	0.16	0.15	0.16	14	68921	76	13	58	5	80
TMR_00280	tmRNA links to Rfam database...	0.11	0.10	0.11	10	65979	89	7	70	12	91
TMR_00283	tmRNA links to Rfam database...	0.28	0.26	0.30	25	65258	63	8	50	5	71
TMR_00289	tmRNA links to Rfam database...	0.11	0.10	0.12	10	67078	83	4	69	10	88
TMR_00290	tmRNA links to Rfam database...	0.20	0.18	0.21	17	64180	64	17	47	0	75
TMR_00296	tmRNA links to Rfam database...	0.12	0.12	0.13	12	68911	84	17	66	1	86
TMR_00298	tmRNA links to Rfam database...	0.24	0.24	0.24	24	68164	85	9	68	8	77
TMR_00300	tmRNA links to Rfam database...	0.31	0.29	0.33	32	70404	74	6	58	10	80
TMR_00301	tmRNA links to Rfam database...	0.45	0.44	0.47	42	82125	57	11	37	9	54
TMR_00302	tmRNA links to Rfam database...	0.34	0.32	0.36	30	77337	64	11	43	10	64
TMR_00305	tmRNA links to Rfam database...	0.20	0.18	0.22	18	60994	72	12	51	9	84
TMR_00306	tmRNA links to Rfam database...	0.32	0.30	0.35	32	64170	62	6	53	3	74
TMR_00310	tmRNA links to Rfam database...	0.24	0.22	0.27	22	63820	72	11	50	11	76
TMR_00317	tmRNA links to Rfam database...	0.28	0.27	0.28	28	68166	73	10	61	2	74
TMR_00331	tmRNA links to Rfam database...	0.29	0.29	0.28	24	66710	74	13	48	13	58
TMR_00332	tmRNA links to Rfam database...	0.19	0.17	0.21	17	67081	68	7	56	5	82
TMR_00334	tmRNA links to Rfam database...	0.32	0.29	0.36	29	66714	59	4	48	7	72
TMR_00337	tmRNA links to Rfam database...	0.16	0.14	0.18	17	82933	84	10	68	6	102
TMR_00340	tmRNA links to Rfam database...	0.13	0.12	0.13	10	64184	84	11	56	17	71
TMR_00341	tmRNA links to Rfam database...	0.39	0.38	0.39	35	63101	57	18	36	3	57
TMR_00343	tmRNA links to Rfam database...	0.31	0.28	0.34	29	64895	64	5	51	8	76
TMR_00345	tmRNA links to Rfam database...	0.35	0.34	0.37	35	63809	63	14	45	4	69
TMR_00346	tmRNA links to Rfam database...	0.22	0.21	0.22	20	64171	74	7	63	4	74
TMR_00348	tmRNA links to Rfam database...	0.05	0.05	0.05	5	77327	100	15	74	11	94
TMR_00352	tmRNA links to Rfam database...	0.12	0.12	0.13	9	95195	91	17	45	29	66
TMR_00353	tmRNA links to Rfam database...	0.16	0.15	0.17	16	84160	95	17	62	16	89
TMR_00357	tmRNA links to Rfam database...	0.24	0.22	0.26	20	82950	75	7	51	17	72
TMR_00358	tmRNA links to Rfam database...	0.17	0.15	0.20	15	75002	78	9	52	17	84
TMR_00361	-	0.15	0.15	0.14	11	93450	84	24	43	17	61
TMR_00366	tmRNA links to Rfam database...	0.17	0.16	0.18	16	67807	79	13	60	6	84
TMR_00372	tmRNA links to Rfam database...	0.14	0.13	0.15	12	70419	82	6	63	13	84
TMR_00374	tmRNA links to Rfam database...	0.14	0.13	0.14	12	81727	84	9	62	13	80
TMR_00375	tmRNA links to Rfam database...	0.36	0.33	0.39	32	73454	60	9	41	10	66
TMR_00376	tmRNA links to Rfam database...	0.30	0.31	0.29	29	74591	82	14	57	11	66
TMR_00378	tmRNA links to Rfam database...	0.20	0.20	0.20	19	67800	82	13	64	5	78
TMR_00383	tmRNA links to Rfam database...	0.17	0.16	0.18	16	66705	81	3	71	7	84
TMR_00384	tmRNA links to Rfam database...	0.33	0.29	0.39	31	65624	52	3	45	4	77
TMR_00393	tmRNA links to Rfam database...	0.26	0.26	0.26	14	53247	68	13	27	28	39
TMR_00395	tmRNA links to Rfam database...	0.50	0.45	0.56	49	64532	44	4	35	5	60
TMR_00398	tmRNA links to Rfam database...	0.44	0.40	0.50	42	65257	46	1	41	4	64
TMR_00399	tmRNA links to Rfam database...	0.17	0.17	0.18	16	64889	78	15	60	3	78
TMR_00404	tmRNA links to Rfam database...	0.28	0.28	0.27	26	67433	70	22	47	1	66
TMR_00408	tmRNA links to Rfam database...	0.14	0.14	0.15	12	65986	78	17	51	10	76
TMR_00409	tmRNA links to Rfam database...	0.12	0.11	0.13	5	68595	84	7	28	49	41
TMR_00411	tmRNA links to Rfam database...	0.10	0.10	0.11	9	60990	81	12	64	5	78
TMR_00415	tmRNA links to Rfam database...	0.16	0.15	0.18	15	67078	69	12	56	1	86
TMR_00419	tmRNA links to Rfam database...	0.18	0.16	0.21	18	81724	80	9	59	12	93
TMR_00422	tmRNA links to Rfam database...	0.22	0.22	0.22	20	67804	78	15	57	6	72
TMR_00423	tmRNA links to Rfam database...	0.17	0.19	0.16	14	63814	80	21	54	5	59
TMR_00427	tmRNA links to Rfam database...	0.12	0.11	0.13	11	67445	79	8	64	7	86
TMR_00429	tmRNA links to Rfam database...	0.23	0.21	0.24	23	74597	77	10	61	6	86
TMR_00430	tmRNA links to Rfam database...	0.17	0.17	0.19	18	82525	84	7	71	6	91
TMR_00431	tmRNA links to Rfam database...	0.31	0.31	0.32	17	51950	70	10	26	34	38
TMR_00432	tmRNA links to Rfam database...	0.19	0.19	0.20	20	79698	88	12	70	6	84
TMR_00433	tmRNA links to Rfam database...	0.08	0.08	0.08	8	80105	90	11	76	3	98
TMR_00439	tmRNA links to Rfam database...	0.27	0.26	0.28	26	68542	77	12	55	10	75
TMR_00441	tmRNA links to Rfam database...	0.14	0.13	0.14	11	62050	85	6	61	18	72
TMR_00443	tmRNA links to Rfam database...	0.17	0.14	0.20	15	67085	65	3	58	4	89
TMR_00448	tmRNA links to Rfam database...	0.19	0.17	0.22	16	62055	63	5	52	6	76
TMR_00451	tmRNA links to Rfam database...	0.17	0.16	0.18	14	63470	66	13	49	4	75
TMR_00457	tmRNA links to Rfam database...	0.24	0.22	0.26	22	78521	66	16	47	3	80
TMR_00458	tmRNA links to Rfam database...	0.16	0.15	0.17	14	63464	78	9	59	10	79
TMR_00460	tmRNA links to Rfam database...	0.30	0.28	0.32	30	79308	66	11	52	3	76
TMR_00465	tmRNA links to Rfam database...	0.23	0.21	0.24	20	64179	67	12	50	5	74
TMR_00469	tmRNA links to Rfam database...	0.34	0.33	0.34	33	64524	70	11	52	7	67
TMR_00472	tmRNA links to Rfam database...	0.35	0.35	0.35	34	64524	68	12	50	6	63
TMR_00478	tmRNA links to Rfam database...	0.09	0.09	0.09	9	71910	94	18	73	3	90
TMR_00498	tmRNA links to Rfam database...	0.17	0.16	0.18	16	68918	79	19	53	7	83
TMR_00499	tmRNA links to Rfam database...	0.21	0.20	0.21	20	64525	80	4	71	5	79
TMR_00501	tmRNA links to Rfam database...	0.07	0.08	0.07	7	62385	89	22	67	0	85
TMR_00502	tmRNA links to Rfam database...	0.33	0.33	0.34	31	75374	69	25	36	8	62
TMR_00503	tmRNA links to Rfam database...	0.36	0.32	0.42	35	67812	56	1	48	7	76
TMR_00519	tmRNA links to Rfam database...	0.23	0.22	0.25	21	63105	74	12	52	10	74
TMR_00520	tmRNA links to Rfam database...	0.23	0.21	0.24	21	63103	71	13	53	5	78
TMR_00522	tmRNA links to Rfam database...	0.12	0.11	0.14	11	63109	79	11	59	9	86
TMR_00528	tmRNA links to Rfam database...	0.08	0.07	0.09	7	63109	83	16	58	9	90
TMR_00540	tmRNA links to Rfam database...	0.09	0.09	0.10	9	73449	89	6	72	11	95
TMR_00541	tmRNA links to Rfam database...	0.32	0.30	0.35	32	61684	65	13	47	5	73
TMR_00544	tmRNA links to Rfam database...	0.25	0.23	0.27	25	89583	78	19	49	10	83
TMR_00547	tmRNA links to Rfam database...	0.23	0.21	0.25	21	65258	71	4	58	9	79
TMR_00553	tmRNA links to Rfam database...	0.39	0.37	0.42	30	48133	50	5	37	8	51
TMR_00559	tmRNA links to Rfam database...	0.26	0.25	0.28	25	62392	70	9	55	6	76
TMR_00560	tmRNA links to Rfam database...	0.23	0.21	0.24	21	60989	69	10	55	4	77
TMR_00562	tmRNA links to Rfam database...	0.20	0.19	0.22	19	72685	71	11	56	4	83
TMR_00563	tmRNA links to Rfam database...	0.23	0.22	0.24	23	75371	76	14	58	4	80
TMR_00566	tmRNA links to Rfam database...	0.32	0.30	0.33	30	60636	64	7	53	4	70
TMR_00568	tmRNA links to Rfam database...	0.14	0.13	0.16	13	60644	75	6	63	6	86
TMR_00570	tmRNA links to Rfam database...	0.26	0.24	0.29	23	60298	64	7	50	7	74
TMR_00571	tmRNA links to Rfam database...	0.19	0.18	0.20	18	60637	72	7	64	1	81
TMR_00576	tmRNA links to Rfam database...	0.16	0.15	0.17	15	60291	77	9	63	5	87
TMR_00579	tmRNA links to Rfam database...	0.25	0.26	0.24	23	80507	79	16	55	8	67
TMR_00580	tmRNA links to Rfam database...	0.28	0.27	0.30	27	60635	65	9	55	1	73
TMR_00581	tmRNA links to Rfam database...	0.35	0.32	0.39	31	62401	53	8	41	4	67
TMR_00584	tmRNA links to Rfam database...	0.37	0.34	0.40	33	60993	56	8	41	7	64
TMR_00586	tmRNA links to Rfam database...	0.25	0.23	0.27	22	60993	66	7	53	6	75
TMR_00587	tmRNA links to Rfam database...	0.35	0.34	0.36	34	61330	62	11	50	1	66
TMR_00588	tmRNA links to Rfam database...	0.22	0.22	0.22	22	77323	81	23	53	5	79
TMR_00594	tmRNA links to Rfam database...	0.24	0.22	0.26	23	79313	69	6	59	4	81
TMR_00596	tmRNA links to Rfam database...	0.35	0.32	0.38	30	78131	62	8	41	13	65
TMR_00599	tmRNA links to Rfam database...	0.23	0.25	0.22	18	63108	68	25	39	4	54
TMR_00600	tmRNA links to Rfam database...	0.16	0.14	0.18	16	79710	74	6	68	0	99
TMR_00601	tmRNA links to Rfam database...	0.25	0.24	0.26	10	58957	74	7	22	45	32
TMR_00603	tmRNA links to Rfam database...	0.26	0.23	0.29	10	60343	68	1	24	43	33
TMR_00604	tmRNA links to Rfam database...	0.38	0.36	0.41	40	62738	57	8	49	0	72
TMR_00605	tmRNA links to Rfam database...	0.28	0.26	0.31	28	74216	66	15	46	5	80
TMR_00606	tmRNA links to Rfam database...	0.35	0.33	0.38	35	68915	60	13	43	4	72
TMR_00609	tmRNA links to Rfam database...	0.29	0.27	0.32	30	63453	65	8	55	2	83
TMR_00610	tmRNA links to Rfam database...	0.35	0.32	0.39	33	62044	62	8	43	11	71
TMR_00611	tmRNA links to Rfam database...	0.46	0.44	0.49	45	61333	50	9	38	3	57
TMR_00612	tmRNA links to Rfam database...	0.35	0.33	0.37	34	60634	62	6	52	4	70
TMR_00614	tmRNA links to Rfam database...	0.42	0.38	0.45	40	60987	54	5	43	6	64
TMR_00615	tmRNA links to Rfam database...	0.17	0.17	0.18	16	63815	79	11	61	7	80
TMR_00616	tmRNA links to Rfam database...	0.28	0.26	0.30	26	67075	66	9	51	6	73
TMR_00617	tmRNA links to Rfam database...	0.15	0.16	0.15	9	34655	55	10	42	3	49
TMR_00623	tmRNA links to Rfam database...	0.15	0.14	0.17	15	61338	78	8	64	6	93
TMR_00624	tmRNA links to Rfam database...	0.33	0.29	0.38	31	62400	55	4	46	5	77
TMR_00625	tmRNA links to Rfam database...	0.14	0.13	0.16	14	78914	83	19	56	8	92
TMR_00626	tmRNA links to Rfam database...	0.34	0.32	0.36	35	67798	68	9	54	5	74
TMR_00680	tmRNA links to Rfam database...	0.33	0.31	0.34	31	67805	68	5	55	8	68
TMR_00681	tmRNA links to Rfam database...	0.21	0.20	0.22	19	65981	74	3	63	8	78
TMR_00683	tmRNA links to Rfam database...	0.10	0.10	0.11	10	82934	94	10	74	10	90
TMR_00686	tmRNA links to Rfam database...	0.20	0.19	0.22	20	71162	77	8	63	6	88
TMR_00687	tmRNA links to Rfam database...	0.26	0.24	0.28	27	71535	72	12	57	3	84
TMR_00696	tmRNA links to Rfam database...	0.05	0.04	0.05	5	84980	104	5	88	11	109
TMR_00698	tmRNA links to Rfam database...	0.25	0.24	0.27	25	63096	69	7	62	0	79
TMR_00699	tmRNA links to Rfam database...	0.15	0.14	0.17	14	67078	73	14	55	4	88
TMR_00702	tmRNA links to Rfam database...	0.17	0.15	0.19	15	67081	72	7	58	7	85
TMR_00703	tmRNA links to Rfam database...	0.32	0.29	0.35	29	67446	60	5	48	7	70
TMR_00706	tmRNA links to Rfam database...	0.25	0.22	0.28	23	66348	59	11	48	0	80
TMR_00711	tmRNA links to Rfam database...	0.24	0.21	0.27	21	67818	61	14	43	4	77
TMR_00712	tmRNA links to Rfam database...	0.22	0.22	0.22	24	78498	84	16	68	0	85
TMR_00716	tmRNA links to Rfam database...	0.22	0.20	0.24	20	62752	67	9	54	4	80

^top

Matthews Correlation Coeffient, Sensitivity and Positive Predictive Value have been calculated based on the paper by Gardener & Giegerich, 2004.

Table of contents:

Overview

Performance plots

Performance of RNAwolf - scored higher in this pairwise comparison

1. Total counts & total scores for RNAwolf

2. Individual counts for RNAwolf [ download as .csv ]

Performance of Vsfold4 - scored lower in this pairwise comparison

1. Total counts & total scores for Vsfold4

2. Individual counts for Vsfold4 [ download as .csv ]