CompaRNA - on-line benchmarks of RNA structure prediction methods

Laboratory of Structural Bioinformatics @ Adam Mickiewicz University in Poznan

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Overview

Metric	UNAFold		RNAwolf
MCC	0.445	>	0.302
Average MCC ± 95% Confidence Intervals	0.464 ± 0.013	>	0.324 ± 0.012
Sensitivity	0.440	>	0.316
Positive Predictive Value	0.450	>	0.289
Total TP	36458	>	26149
Total TN	83090945	>	83081604
Total FP	53525	<	77289
Total FP CONTRA	7851	<	11934
Total FP INCONS	36695	<	52262
Total FP COMP	8979	<	13093
Total FN	46358	<	56667
P-value	3.56938820447e-08

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Performance plots

Comparison of performance of UNAFold and RNAwolf. Positive Predictive Value (PPV) is plotted against sensitivity. Each dot represents a single test of each method. See tables below for raw data (individual counts for UNAFold and RNAwolf).
Average Matthews Correlation Coefficients (MCC) with 95% confidence intervals (CIs) were plotted for different RNA families, for which at least 3 members were present in the benchmarking dataset. 'n' denotes the number of MCCs used to calculate the average and CI. See tables below for raw data (individual counts for UNAFold and RNAwolf).
Comparison of average Matthews Correlation Coefficients (MCCs) for UNAFold and RNAwolf. The whiskers correspond to 95% confidence intervals (CIs). 'n' denotes the number of MCCs used to calculate average MCCs and CIs. See tables below for raw data (individual counts for UNAFold and RNAwolf).

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Performance of UNAFold - scored higher in this pairwise comparison

1. Total counts & total scores for UNAFold

Total Base Pair Counts
Total TP	36458
Total TN	83090945
Total FP	53525
Total FP CONTRA	7851
Total FP INCONS	36695
Total FP COMP	8979
Total FN	46358

Total Scores
MCC	0.445
Average MCC ± 95% Confidence Intervals	0.464 ± 0.013
Sensitivity	0.440
Positive Predictive Value	0.450
Nr of predictions	740

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2. Individual counts for UNAFold [ download as .csv ]

RNA Chain	Rfam family	MCC	SENS	PPV	TP	TN	FP	FP CONTRA	FP INCONS	FP COMP	FN
ASE_00001	RNaseP_arch links to Rfam database...	0.63	0.61	0.66	46	34121	30	2	22	6	29
ASE_00002	RNaseP_arch links to Rfam database...	0.66	0.62	0.70	45	35447	24	3	16	5	28
ASE_00004	RNaseP_bact_a links to Rfam database...	0.71	0.70	0.72	68	47800	29	9	18	2	29
ASE_00005	RNaseP_bact_a links to Rfam database...	0.60	0.54	0.67	63	57876	35	1	30	4	54
ASE_00006	RNaseP_bact_a links to Rfam database...	0.67	0.66	0.68	61	47496	32	7	22	3	32
ASE_00007	RNaseP_bact_a links to Rfam database...	0.57	0.54	0.60	59	59587	43	1	38	4	51
ASE_00009	RNaseP_arch links to Rfam database...	0.78	0.75	0.81	50	26044	15	0	12	3	17
ASE_00012	RNaseP_bact_a links to Rfam database...	0.52	0.48	0.56	59	73814	52	4	43	5	64
ASE_00014	RNaseP_arch links to Rfam database...	0.24	0.25	0.24	26	54178	82	8	73	1	80
ASE_00017	RNaseP_nuc links to Rfam database...	0.26	0.28	0.24	18	50966	75	6	50	19	46
ASE_00018	RNaseP_bact_a links to Rfam database...	0.78	0.73	0.84	98	80484	21	4	15	2	36
ASE_00020	RNaseP_bact_a links to Rfam database...	0.57	0.54	0.60	68	73806	46	7	39	0	58
ASE_00021	RNaseP_bact_a links to Rfam database...	0.58	0.54	0.62	86	104057	60	7	46	7	74
ASE_00022	RNaseP_bact_b links to Rfam database...	0.46	0.45	0.48	56	82911	67	6	55	6	68
ASE_00023	RNaseP_bact_a links to Rfam database...	0.64	0.64	0.64	81	84129	48	5	40	3	46
ASE_00025	RNaseP_nuc links to Rfam database...	0.22	0.24	0.21	17	78526	115	12	51	52	54
ASE_00026	RNaseP_bact_a links to Rfam database...	0.53	0.51	0.54	56	59582	55	1	46	8	54
ASE_00028	RNaseP_bact_b links to Rfam database...	0.56	0.55	0.57	69	84545	60	8	44	8	57
ASE_00029	RNaseP_bact_a links to Rfam database...	0.37	0.36	0.38	44	82913	73	12	59	2	78
ASE_00030	RNaseP_bact_a links to Rfam database...	0.60	0.58	0.63	84	85357	50	5	45	0	61
ASE_00031	RNaseP_bact_a links to Rfam database...	0.60	0.58	0.61	73	86617	56	4	42	10	53
ASE_00032	RNaseP_bact_a links to Rfam database...	0.56	0.53	0.58	63	80092	50	3	42	5	55
ASE_00033	RNaseP_bact_a links to Rfam database...	0.58	0.52	0.65	63	64883	37	2	32	3	58
ASE_00035	RNaseP_bact_a links to Rfam database...	0.30	0.28	0.32	33	70398	76	12	57	7	85
ASE_00036	RNaseP_bact_a links to Rfam database...	0.43	0.41	0.45	54	75734	70	8	59	3	78
ASE_00037	RNaseP_bact_a links to Rfam database...	0.63	0.59	0.66	65	59242	37	0	33	4	45
ASE_00038	RNaseP_bact_a links to Rfam database...	0.54	0.53	0.54	54	53528	47	4	42	1	47
ASE_00040	RNaseP_bact_a links to Rfam database...	0.48	0.46	0.50	61	78882	66	5	55	6	72
ASE_00041	RNaseP_bact_a links to Rfam database...	0.44	0.41	0.47	44	57537	53	2	47	4	64
ASE_00042	RNaseP_bact_a links to Rfam database...	0.61	0.57	0.64	83	89971	49	2	44	3	62
ASE_00044	RNaseP_bact_a links to Rfam database...	0.69	0.68	0.70	71	54514	34	3	27	4	34
ASE_00046	RNaseP_bact_a links to Rfam database...	0.57	0.51	0.64	53	50320	30	5	25	0	50
ASE_00047	RNaseP_bact_a links to Rfam database...	0.33	0.32	0.35	41	74189	76	4	71	1	89
ASE_00052	RNaseP_bact_a links to Rfam database...	0.51	0.47	0.55	53	61329	48	2	41	5	59
ASE_00053	RNaseP_bact_a links to Rfam database...	0.56	0.54	0.57	72	79275	57	5	49	3	61
ASE_00056	-	0.38	0.36	0.41	26	30812	48	4	34	10	46
ASE_00057	RNaseP_bact_a links to Rfam database...	0.63	0.60	0.65	81	82090	49	8	36	5	53
ASE_00064	RNaseP_bact_a links to Rfam database...	0.32	0.31	0.32	28	45363	69	4	56	9	61
ASE_00066	RNaseP_bact_a links to Rfam database...	0.68	0.64	0.73	83	72277	31	4	26	1	47
ASE_00068	RNaseP_bact_a links to Rfam database...	0.52	0.49	0.55	42	37598	35	4	31	0	43
ASE_00069	RNaseP_bact_a links to Rfam database...	0.66	0.64	0.68	90	82896	45	5	37	3	50
ASE_00074	RNaseP_bact_a links to Rfam database...	0.58	0.57	0.60	68	67782	46	5	41	0	51
ASE_00075	RNaseP_bact_a links to Rfam database...	0.61	0.56	0.68	90	108678	47	3	40	4	72
ASE_00076	RNaseP_bact_a links to Rfam database...	0.55	0.52	0.59	61	68161	46	4	39	3	57
ASE_00077	RNaseP_bact_a links to Rfam database...	0.52	0.51	0.54	44	45068	38	7	31	0	42
ASE_00078	RNaseP_bact_a links to Rfam database...	0.65	0.63	0.68	52	42994	31	0	25	6	31
ASE_00079	RNaseP_bact_a links to Rfam database...	0.54	0.52	0.57	52	55519	40	4	36	0	48
ASE_00080	RNaseP_bact_a links to Rfam database...	0.47	0.45	0.49	55	71519	60	5	52	3	68
ASE_00081	RNaseP_bact_a links to Rfam database...	0.56	0.54	0.58	52	49680	39	2	36	1	45
ASE_00082	RNaseP_bact_a links to Rfam database...	0.55	0.51	0.59	59	70400	55	1	40	14	57
ASE_00083	RNaseP_bact_a links to Rfam database...	0.79	0.75	0.83	82	62382	24	2	15	7	28
ASE_00084	RNaseP_bact_a links to Rfam database...	0.69	0.69	0.70	68	53531	32	6	23	3	31
ASE_00087	RNaseP_bact_a links to Rfam database...	0.59	0.54	0.64	78	88288	49	5	39	5	66
ASE_00089	-	0.65	0.58	0.72	46	31311	21	0	18	3	33
ASE_00090	RNaseP_bact_a links to Rfam database...	0.59	0.59	0.59	60	55509	47	2	40	5	41
ASE_00092	RNaseP_bact_a links to Rfam database...	0.69	0.65	0.73	74	63444	33	5	23	5	39
ASE_00096	RNaseP_bact_a links to Rfam database...	0.56	0.54	0.59	62	63441	43	4	39	0	53
ASE_00099	RNaseP_bact_a links to Rfam database...	0.51	0.50	0.53	60	64506	56	6	48	2	60
ASE_00100	RNaseP_nuc links to Rfam database...	0.21	0.22	0.19	17	82126	113	16	56	41	59
ASE_00102	RNaseP_bact_a links to Rfam database...	0.43	0.41	0.45	68	117703	87	8	76	3	98
ASE_00104	RNaseP_bact_a links to Rfam database...	0.70	0.67	0.73	80	64151	31	5	25	1	39
ASE_00105	RNaseP_bact_a links to Rfam database...	0.36	0.34	0.38	38	64161	64	6	56	2	73
ASE_00107	RNaseP_bact_a links to Rfam database...	0.66	0.65	0.67	82	73031	40	5	35	0	45
ASE_00108	RNaseP_nuc links to Rfam database...	0.24	0.29	0.20	18	46883	81	21	49	11	45
ASE_00111	RNaseP_nuc links to Rfam database...	0.25	0.32	0.20	18	49997	80	31	40	9	39
ASE_00112	RNaseP_bact_a links to Rfam database...	0.78	0.74	0.83	86	75362	24	5	13	6	30
ASE_00115	RNaseP_bact_a links to Rfam database...	0.49	0.48	0.51	48	54521	53	1	45	7	53
ASE_00116	RNaseP_arch links to Rfam database...	0.20	0.20	0.20	13	31561	55	2	50	3	53
ASE_00118	RNaseP_bact_a links to Rfam database...	0.58	0.56	0.59	57	60630	42	3	36	3	45
ASE_00119	RNaseP_bact_a links to Rfam database...	0.67	0.65	0.69	70	62734	33	1	30	2	38
ASE_00120	RNaseP_arch links to Rfam database...	0.51	0.49	0.53	46	46885	42	8	32	2	48
ASE_00121	RNaseP_arch links to Rfam database...	0.24	0.24	0.24	22	45060	68	5	63	0	70
ASE_00122	RNaseP_bact_a links to Rfam database...	0.47	0.45	0.48	40	43282	43	2	41	0	48
ASE_00123	RNaseP_bact_a links to Rfam database...	0.28	0.27	0.29	23	38425	59	3	52	4	62
ASE_00125	RNaseP_bact_a links to Rfam database...	0.64	0.63	0.65	55	39255	30	4	26	0	33
ASE_00126	RNaseP_bact_a links to Rfam database...	0.75	0.77	0.74	63	40385	26	3	19	4	19
ASE_00128	RNaseP_bact_a links to Rfam database...	0.65	0.62	0.69	62	53211	36	3	25	8	38
ASE_00129	RNaseP_bact_a links to Rfam database...	0.52	0.50	0.53	56	62730	53	5	44	4	55
ASE_00131	RNaseP_bact_a links to Rfam database...	0.61	0.55	0.68	47	39271	32	0	22	10	38
ASE_00132	RNaseP_bact_a links to Rfam database...	0.66	0.63	0.68	60	50315	30	4	24	2	35
ASE_00134	RNaseP_bact_a links to Rfam database...	0.41	0.42	0.40	40	50302	64	10	51	3	55
ASE_00135	RNaseP_bact_a links to Rfam database...	0.46	0.45	0.47	49	63085	59	8	48	3	60
ASE_00136	RNaseP_bact_a links to Rfam database...	0.56	0.52	0.60	48	48125	41	1	31	9	44
ASE_00137	RNaseP_bact_a links to Rfam database...	0.67	0.65	0.68	64	48422	32	4	26	2	34
ASE_00138	RNaseP_bact_a links to Rfam database...	0.53	0.52	0.55	42	40393	35	4	31	0	39
ASE_00139	RNaseP_bact_a links to Rfam database...	0.35	0.33	0.38	34	54196	58	4	51	3	70
ASE_00140	RNaseP_bact_a links to Rfam database...	0.72	0.67	0.77	84	70767	27	4	21	2	41
ASE_00142	RNaseP_bact_a links to Rfam database...	0.74	0.70	0.79	85	67054	26	4	18	4	37
ASE_00145	RNaseP_arch links to Rfam database...	0.46	0.45	0.48	50	70021	59	7	47	5	61
ASE_00146	RNaseP_bact_a links to Rfam database...	0.55	0.52	0.60	64	70769	49	2	41	6	60
ASE_00148	RNaseP_arch links to Rfam database...	0.69	0.67	0.72	103	112431	44	4	37	3	51
ASE_00151	RNaseP_bact_a links to Rfam database...	0.29	0.28	0.31	27	51915	61	7	54	0	71
ASE_00153	RNaseP_nuc links to Rfam database...	0.67	0.68	0.66	50	57554	68	2	24	42	23
ASE_00154	RNaseP_arch links to Rfam database...	0.64	0.63	0.65	67	65238	39	4	32	3	40
ASE_00155	RNaseP_arch links to Rfam database...	0.62	0.61	0.63	86	93392	57	8	42	7	56
ASE_00163	RNaseP_bact_a links to Rfam database...	0.60	0.59	0.62	55	53212	45	2	32	11	38
ASE_00165	RNaseP_bact_a links to Rfam database...	0.54	0.52	0.56	53	52881	42	5	36	1	48
ASE_00168	RNaseP_nuc links to Rfam database...	0.31	0.38	0.25	24	60631	84	28	43	13	40
ASE_00169	RNaseP_bact_a links to Rfam database...	0.51	0.49	0.54	52	57194	49	7	38	4	55
ASE_00170	RNaseP_bact_a links to Rfam database...	0.70	0.68	0.72	63	48740	26	2	23	1	30
ASE_00171	RNaseP_bact_a links to Rfam database...	0.70	0.69	0.71	65	48425	26	5	21	0	29
ASE_00172	RNaseP_bact_a links to Rfam database...	0.69	0.68	0.70	72	58893	36	6	25	5	34
ASE_00174	RNaseP_bact_a links to Rfam database...	0.52	0.51	0.53	56	60970	50	6	43	1	53
ASE_00175	RNaseP_bact_a links to Rfam database...	0.73	0.70	0.76	75	59932	31	2	22	7	32
ASE_00176	RNaseP_bact_a links to Rfam database...	0.61	0.58	0.64	64	59931	39	6	30	3	46
ASE_00179	RNaseP_bact_a links to Rfam database...	0.65	0.65	0.64	55	44167	31	6	25	0	29
ASE_00180	RNaseP_bact_a links to Rfam database...	0.65	0.62	0.69	62	51270	33	2	26	5	38
ASE_00181	RNaseP_bact_a links to Rfam database...	0.54	0.53	0.55	56	57528	50	3	43	4	50
ASE_00182	RNaseP_bact_a links to Rfam database...	0.53	0.51	0.55	69	84130	59	6	50	3	67
ASE_00183	RNaseP_bact_a links to Rfam database...	0.72	0.71	0.73	80	61316	33	2	27	4	33
ASE_00184	RNaseP_bact_a links to Rfam database...	0.66	0.66	0.66	67	54513	35	9	26	0	35
ASE_00185	RNaseP_bact_a links to Rfam database...	0.74	0.71	0.77	91	73418	33	5	22	6	37
ASE_00186	RNaseP_bact_a links to Rfam database...	0.74	0.70	0.79	92	78886	30	3	22	5	40
ASE_00187	RNaseP_arch links to Rfam database...	0.47	0.44	0.49	51	68531	58	6	47	5	64
ASE_00189	RNaseP_bact_b links to Rfam database...	0.52	0.49	0.54	50	63098	47	8	34	5	52
ASE_00190	RNaseP_bact_b links to Rfam database...	0.57	0.54	0.60	49	45369	35	6	27	2	41
ASE_00192	RNaseP_bact_b links to Rfam database...	0.41	0.40	0.42	53	84541	78	9	63	6	80
ASE_00194	RNaseP_bact_b links to Rfam database...	0.54	0.53	0.56	63	73423	54	11	39	4	56
ASE_00195	-	0.60	0.58	0.62	77	86195	53	2	46	5	56
ASE_00196	RNaseP_arch links to Rfam database...	0.73	0.72	0.75	54	31554	21	2	16	3	21
ASE_00197	RNaseP_bact_a links to Rfam database...	0.54	0.50	0.58	73	89127	58	2	51	5	72
ASE_00198	RNaseP_bact_a links to Rfam database...	0.53	0.53	0.53	54	52549	47	7	40	0	48
ASE_00203	RNaseP_bact_a links to Rfam database...	0.62	0.61	0.63	59	46572	34	6	28	0	37
ASE_00204	RNaseP_bact_b links to Rfam database...	0.65	0.61	0.69	68	67798	35	7	23	5	44
ASE_00205	RNaseP_arch links to Rfam database...	0.43	0.43	0.43	39	45966	54	7	44	3	51
ASE_00209	RNaseP_arch links to Rfam database...	0.39	0.38	0.42	33	42992	46	5	41	0	55
ASE_00210	RNaseP_arch links to Rfam database...	0.59	0.60	0.59	39	27195	28	6	21	1	26
ASE_00212	RNaseP_bact_a links to Rfam database...	0.51	0.49	0.54	72	93827	66	5	57	4	76
ASE_00213	RNaseP_arch links to Rfam database...	0.74	0.73	0.76	48	27198	16	3	12	1	18
ASE_00214	RNaseP_bact_a links to Rfam database...	0.79	0.77	0.81	79	56182	27	3	16	8	24
ASE_00215	RNaseP_bact_a links to Rfam database...	0.58	0.55	0.62	54	48429	35	7	26	2	45
ASE_00216	RNaseP_bact_a links to Rfam database...	0.66	0.66	0.67	54	39259	28	9	18	1	28
ASE_00217	RNaseP_bact_a links to Rfam database...	0.30	0.29	0.33	26	40390	58	6	48	4	64
ASE_00221	RNaseP_bact_a links to Rfam database...	0.57	0.52	0.64	61	64524	38	3	32	3	56
ASE_00222	RNaseP_arch links to Rfam database...	0.59	0.59	0.61	92	111949	61	10	50	1	65
ASE_00227	RNaseP_bact_a links to Rfam database...	0.30	0.29	0.32	38	78885	80	5	75	0	95
ASE_00228	RNaseP_bact_a links to Rfam database...	0.53	0.55	0.52	47	46880	44	14	30	0	39
ASE_00229	RNaseP_bact_a links to Rfam database...	0.60	0.60	0.61	52	42401	33	10	23	0	35
ASE_00231	RNaseP_bact_a links to Rfam database...	0.31	0.31	0.31	30	47798	67	8	59	0	66
ASE_00232	RNaseP_bact_a links to Rfam database...	0.59	0.58	0.60	49	38422	34	3	29	2	35
ASE_00234	RNaseP_bact_a links to Rfam database...	0.51	0.47	0.54	61	75354	55	4	47	4	68
ASE_00237	RNaseP_nuc links to Rfam database...	0.00	0.00	0.00	0	45667	96	29	57	10	56
ASE_00238	RNaseP_bact_a links to Rfam database...	0.52	0.50	0.53	57	64154	55	1	49	5	57
ASE_00240	RNaseP_bact_a links to Rfam database...	0.61	0.59	0.63	55	46578	40	2	30	8	38
ASE_00241	RNaseP_bact_a links to Rfam database...	0.55	0.53	0.58	46	43876	41	5	29	7	41
ASE_00242	RNaseP_bact_a links to Rfam database...	0.72	0.68	0.76	76	60975	27	3	21	3	36
ASE_00246	RNaseP_nuc links to Rfam database...	0.16	0.18	0.15	12	48123	79	19	51	9	55
ASE_00247	RNaseP_nuc links to Rfam database...	0.17	0.19	0.15	12	54207	97	18	48	31	52
ASE_00248	RNaseP_bact_a links to Rfam database...	0.41	0.38	0.44	43	62383	55	3	52	0	71
ASE_00250	RNaseP_bact_a links to Rfam database...	0.48	0.46	0.50	60	78884	62	5	54	3	71
ASE_00252	RNaseP_bact_a links to Rfam database...	0.56	0.54	0.58	91	115284	69	5	60	4	77
ASE_00254	RNaseP_bact_a links to Rfam database...	0.74	0.72	0.76	59	36778	24	6	13	5	23
ASE_00255	RNaseP_bact_a links to Rfam database...	0.48	0.45	0.50	59	74573	59	7	52	0	71
ASE_00257	RNaseP_bact_a links to Rfam database...	0.56	0.56	0.57	54	50946	40	9	31	0	43
ASE_00259	RNaseP_bact_a links to Rfam database...	0.49	0.45	0.52	55	73048	53	4	46	3	66
ASE_00263	RNaseP_bact_a links to Rfam database...	0.62	0.62	0.62	74	70380	47	5	41	1	46
ASE_00264	RNaseP_nuc links to Rfam database...	0.89	0.83	0.97	83	49055	16	0	3	13	17
ASE_00267	RNaseP_bact_a links to Rfam database...	0.49	0.45	0.53	40	45074	45	4	32	9	48
ASE_00270	RNaseP_bact_a links to Rfam database...	0.68	0.66	0.69	85	72267	40	7	31	2	43
ASE_00274	RNaseP_bact_a links to Rfam database...	0.50	0.49	0.51	50	55513	48	9	39	0	53
ASE_00277	RNaseP_bact_a links to Rfam database...	0.39	0.38	0.39	35	48115	57	9	46	2	56
ASE_00279	RNaseP_bact_a links to Rfam database...	0.70	0.66	0.74	67	53210	28	0	24	4	34
ASE_00280	RNaseP_bact_a links to Rfam database...	0.62	0.60	0.64	59	51911	38	4	29	5	39
ASE_00281	RNaseP_bact_a links to Rfam database...	0.54	0.51	0.58	45	44473	39	0	33	6	43
ASE_00282	RNaseP_bact_a links to Rfam database...	0.55	0.54	0.56	69	77692	54	6	48	0	58
ASE_00283	RNaseP_bact_a links to Rfam database...	0.82	0.79	0.86	84	61678	22	2	12	8	23
ASE_00284	RNaseP_bact_a links to Rfam database...	0.63	0.61	0.65	66	58209	41	5	31	5	42
ASE_00285	RNaseP_bact_a links to Rfam database...	0.69	0.65	0.73	79	68898	36	2	27	7	43
ASE_00286	RNaseP_bact_a links to Rfam database...	0.43	0.42	0.43	39	46574	61	3	49	9	53
ASE_00287	RNaseP_bact_a links to Rfam database...	0.70	0.66	0.75	68	54855	30	2	21	7	35
ASE_00288	RNaseP_bact_a links to Rfam database...	0.45	0.43	0.47	40	45970	47	3	43	1	53
ASE_00289	RNaseP_bact_a links to Rfam database...	0.66	0.62	0.70	97	100887	44	3	38	3	60
ASE_00291	-	0.37	0.36	0.39	34	48429	54	9	44	1	60
ASE_00292	RNaseP_bact_a links to Rfam database...	0.64	0.59	0.70	82	81693	38	3	32	3	56
ASE_00294	RNaseP_bact_a links to Rfam database...	0.78	0.74	0.83	127	114328	29	3	23	3	44
ASE_00295	RNaseP_bact_a links to Rfam database...	0.63	0.59	0.67	77	73805	41	6	32	3	54
ASE_00296	RNaseP_bact_a links to Rfam database...	0.29	0.28	0.31	40	91676	90	9	81	0	105
ASE_00297	RNaseP_bact_a links to Rfam database...	0.68	0.67	0.69	66	52879	30	4	26	0	32
ASE_00298	RNaseP_bact_a links to Rfam database...	0.46	0.44	0.48	50	67423	59	6	49	4	63
ASE_00299	RNaseP_bact_a links to Rfam database...	0.50	0.48	0.52	48	49362	52	5	40	7	52
ASE_00313	RNaseP_nuc links to Rfam database...	0.72	0.71	0.72	63	62394	46	6	18	22	26
ASE_00316	RNaseP_nuc links to Rfam database...	0.59	0.57	0.61	56	107788	84	7	29	48	42
ASE_00318	RNaseP_bact_b links to Rfam database...	0.65	0.64	0.67	75	80088	41	13	24	4	43
ASE_00327	RNaseP_nuc links to Rfam database...	0.81	0.76	0.85	68	57211	32	4	8	20	21
ASE_00328	RNaseP_bact_b links to Rfam database...	0.40	0.40	0.41	45	72660	73	3	63	7	67
ASE_00330	RNaseP_nuc links to Rfam database...	0.70	0.70	0.71	63	56191	46	4	22	20	27
ASE_00332	RNaseP_bact_a links to Rfam database...	0.54	0.51	0.56	71	81683	57	2	54	1	67
ASE_00335	RNaseP_bact_b links to Rfam database...	0.48	0.47	0.50	54	75358	61	5	49	7	62
ASE_00337	RNaseP_nuc links to Rfam database...	0.58	0.58	0.59	41	39270	43	5	24	14	30
ASE_00338	RNaseP_nuc links to Rfam database...	0.60	0.54	0.66	53	66350	49	5	22	22	45
ASE_00339	RNaseP_bact_a links to Rfam database...	0.53	0.52	0.53	62	80084	67	5	49	13	57
ASE_00340	RNaseP_bact_a links to Rfam database...	0.75	0.74	0.76	63	45973	29	6	14	9	22
ASE_00342	RNaseP_bact_a links to Rfam database...	0.56	0.51	0.60	59	62383	39	2	37	0	56
ASE_00343	RNaseP_bact_a links to Rfam database...	0.63	0.63	0.63	71	83323	55	8	34	13	42
ASE_00346	RNaseP_arch links to Rfam database...	0.30	0.29	0.31	28	48115	64	7	55	2	69
ASE_00353	RNaseP_bact_a links to Rfam database...	0.49	0.50	0.48	53	57859	58	11	47	0	54
ASE_00359	RNaseP_arch links to Rfam database...	0.49	0.49	0.49	39	42698	46	3	38	5	41
ASE_00360	RNaseP_arch links to Rfam database...	0.22	0.23	0.22	15	29335	57	10	43	4	50
ASE_00361	RNaseP_bact_a links to Rfam database...	0.49	0.46	0.51	59	75351	59	7	49	3	68
ASE_00362	RNaseP_bact_a links to Rfam database...	0.62	0.62	0.63	56	48116	36	6	27	3	35
ASE_00363	RNaseP_bact_a links to Rfam database...	0.55	0.55	0.54	52	51264	47	4	40	3	42
ASE_00364	RNaseP_bact_a links to Rfam database...	0.31	0.30	0.32	32	54184	72	7	62	3	73
ASE_00366	RNaseP_bact_a links to Rfam database...	0.56	0.58	0.54	57	58547	50	10	39	1	41
ASE_00367	RNaseP_bact_a links to Rfam database...	0.55	0.56	0.55	48	42983	43	6	34	3	38
ASE_00369	RNaseP_bact_a links to Rfam database...	0.65	0.63	0.67	67	55845	37	3	30	4	40
ASE_00370	RNaseP_bact_a links to Rfam database...	0.67	0.65	0.69	55	41825	25	7	18	0	29
ASE_00372	RNaseP_bact_a links to Rfam database...	0.70	0.69	0.71	69	51906	31	5	23	3	31
ASE_00374	RNaseP_bact_a links to Rfam database...	0.56	0.56	0.57	49	44764	37	8	29	0	39
ASE_00375	RNaseP_bact_a links to Rfam database...	0.72	0.68	0.77	75	60280	28	1	22	5	35
ASE_00376	RNaseP_bact_a links to Rfam database...	0.52	0.50	0.55	53	56856	47	4	40	3	52
ASE_00377	RNaseP_bact_a links to Rfam database...	0.68	0.66	0.70	71	57529	36	4	26	6	36
ASE_00379	RNaseP_bact_a links to Rfam database...	0.70	0.69	0.71	61	45970	34	3	22	9	28
ASE_00380	RNaseP_bact_a links to Rfam database...	0.47	0.44	0.49	44	54857	50	1	44	5	55
ASE_00382	RNaseP_bact_a links to Rfam database...	0.53	0.52	0.54	44	41824	40	6	31	3	40
ASE_00383	RNaseP_bact_a links to Rfam database...	0.53	0.50	0.55	53	54519	47	4	39	4	52
ASE_00384	RNaseP_bact_a links to Rfam database...	0.60	0.59	0.61	54	48428	39	2	32	5	38
ASE_00385	RNaseP_bact_a links to Rfam database...	0.55	0.52	0.58	42	41832	35	4	27	4	39
ASE_00386	RNaseP_bact_a links to Rfam database...	0.62	0.61	0.63	59	50309	42	2	33	7	37
ASE_00387	RNaseP_bact_a links to Rfam database...	0.44	0.44	0.44	46	55841	58	6	52	0	58
ASE_00388	RNaseP_bact_a links to Rfam database...	0.73	0.73	0.74	65	45665	28	3	20	5	24
ASE_00390	RNaseP_bact_a links to Rfam database...	0.49	0.47	0.51	40	42117	45	6	32	7	45
ASE_00393	RNaseP_bact_a links to Rfam database...	0.36	0.34	0.38	32	47810	59	3	50	6	61
ASE_00394	RNaseP_bact_a links to Rfam database...	0.75	0.75	0.75	70	46878	26	5	18	3	23
ASE_00395	RNaseP_bact_a links to Rfam database...	0.55	0.58	0.52	49	41521	46	8	38	0	35
ASE_00396	RNaseP_bact_a links to Rfam database...	0.57	0.58	0.56	48	41530	43	8	30	5	35
ASE_00397	RNaseP_bact_a links to Rfam database...	0.57	0.57	0.58	60	54511	46	3	41	2	45
ASE_00398	RNaseP_bact_a links to Rfam database...	0.66	0.64	0.68	67	55846	35	3	29	3	37
ASE_00400	RNaseP_bact_a links to Rfam database...	0.56	0.55	0.57	58	57869	44	4	39	1	48
ASE_00401	RNaseP_bact_a links to Rfam database...	0.56	0.56	0.56	70	76904	54	11	43	0	56
ASE_00402	RNaseP_bact_a links to Rfam database...	0.62	0.61	0.63	52	42403	34	6	25	3	33
ASE_00403	RNaseP_bact_a links to Rfam database...	0.46	0.44	0.47	47	55846	53	3	49	1	60
ASE_00404	RNaseP_bact_a links to Rfam database...	0.55	0.54	0.57	46	42990	42	0	35	7	39
ASE_00406	RNaseP_bact_a links to Rfam database...	0.70	0.67	0.73	63	48742	27	8	15	4	31
ASE_00408	-	0.49	0.48	0.50	34	32317	39	2	32	5	37
ASE_00409	-	0.50	0.49	0.51	41	40960	40	2	38	0	42
ASE_00411	RNaseP_bact_a links to Rfam database...	0.35	0.36	0.34	32	49362	61	11	50	0	57
ASE_00412	RNaseP_bact_a links to Rfam database...	0.45	0.44	0.47	46	58213	54	8	44	2	59
ASE_00413	RNaseP_bact_a links to Rfam database...	0.53	0.56	0.51	45	44462	44	14	30	0	36
ASE_00414	RNaseP_bact_a links to Rfam database...	0.37	0.35	0.40	33	46278	56	2	47	7	62
ASE_00415	RNaseP_bact_a links to Rfam database...	0.43	0.44	0.42	45	54840	63	9	52	2	58
ASE_00416	RNaseP_bact_a links to Rfam database...	0.70	0.67	0.73	85	77305	38	2	29	7	42
ASE_00417	RNaseP_arch links to Rfam database...	0.36	0.37	0.35	37	54509	72	10	59	3	63
ASE_00418	RNaseP_arch links to Rfam database...	0.21	0.21	0.20	16	38702	65	12	51	2	59
ASE_00419	RNaseP_bact_a links to Rfam database...	0.77	0.74	0.81	76	54852	22	4	14	4	27
ASE_00422	RNaseP_bact_a links to Rfam database...	0.70	0.68	0.73	64	46883	31	5	19	7	30
ASE_00423	RNaseP_bact_a links to Rfam database...	0.50	0.49	0.52	53	56852	51	7	41	3	56
ASE_00426	RNaseP_bact_a links to Rfam database...	0.40	0.40	0.41	43	60969	63	9	54	0	65
ASE_00428	RNaseP_bact_a links to Rfam database...	0.53	0.51	0.56	64	76521	55	5	46	4	61
ASE_00429	-	0.39	0.38	0.41	25	28142	44	1	35	8	41
ASE_00430	RNaseP_bact_a links to Rfam database...	0.64	0.62	0.66	60	46880	38	5	26	7	37
ASE_00431	RNaseP_bact_a links to Rfam database...	0.52	0.49	0.55	47	46274	44	4	35	5	48
ASE_00434	RNaseP_bact_b links to Rfam database...	0.63	0.59	0.66	65	68167	46	8	25	13	45
ASE_00437	RNaseP_bact_a links to Rfam database...	0.42	0.40	0.44	54	79278	69	5	64	0	81
ASE_00438	RNaseP_bact_a links to Rfam database...	0.48	0.44	0.52	51	65967	48	2	46	0	65
ASE_00441	RNaseP_bact_a links to Rfam database...	0.77	0.72	0.82	81	64162	30	2	16	12	31
ASE_00447	RNaseP_bact_a links to Rfam database...	0.50	0.47	0.52	55	60273	53	1	49	3	61
ASE_00448	RNaseP_bact_a links to Rfam database...	0.22	0.22	0.23	25	64150	92	6	80	6	87
ASE_00451	RNaseP_bact_a links to Rfam database...	0.63	0.59	0.68	74	70767	38	2	33	3	51
CRW_00002	-	0.55	0.54	0.56	143	408803	127	31	83	13	121
CRW_00004	-	0.51	0.52	0.50	68	154154	101	8	60	33	63
CRW_00005	-	0.56	0.55	0.56	73	137945	80	10	47	23	59
CRW_00007	-	0.50	0.53	0.48	70	144845	81	26	50	5	63
CRW_00009	-	0.57	0.58	0.56	80	137933	86	9	53	24	58
CRW_00010	-	0.80	0.78	0.82	98	102711	38	6	16	16	28
CRW_00011	-	0.65	0.66	0.65	91	118200	61	8	42	11	47
CRW_00012	-	0.24	0.26	0.23	36	146997	127	27	93	7	105
CRW_00013	Intron_gpI links to Rfam database...	0.24	0.24	0.24	28	103624	107	18	70	19	87
CRW_00014	-	0.36	0.37	0.36	45	103615	91	13	67	11	78
CRW_00016	Intron_gpI links to Rfam database...	0.62	0.57	0.67	68	77320	45	5	28	12	52
CRW_00017	-	0.40	0.44	0.37	40	92126	88	18	51	19	51
CRW_00018	-	0.59	0.65	0.53	79	182562	107	37	32	38	42
CRW_00019	-	0.61	0.60	0.62	82	127633	70	10	40	20	55
CRW_00417	-	0.39	0.38	0.40	99	458154	161	21	129	11	163
CRW_00418	-	0.22	0.20	0.24	52	441115	174	21	142	11	208
CRW_00419	-	0.20	0.18	0.21	49	463930	194	17	170	7	216
CRW_00421	-	0.31	0.30	0.33	79	462964	173	28	132	13	187
CRW_00422	-	0.37	0.36	0.38	95	455287	170	24	129	17	168
CRW_00423	-	0.20	0.21	0.20	40	242353	171	28	135	8	149
CRW_00424	-	0.38	0.39	0.38	140	789031	251	22	203	26	223
CRW_00426	-	0.34	0.33	0.35	88	457193	175	23	142	10	177
CRW_00427	-	0.21	0.21	0.22	54	454337	205	33	157	15	207
CRW_00428	-	0.38	0.38	0.38	98	465840	170	32	125	13	162
CRW_00429	-	0.12	0.12	0.12	29	306700	211	29	178	4	204
CRW_00430	-	0.45	0.42	0.49	112	456262	128	20	96	12	154
CRW_00433	-	0.29	0.26	0.32	68	467817	148	21	122	5	195
CRW_00434	-	0.31	0.29	0.33	75	457220	157	19	132	6	188
CRW_00435	-	0.45	0.42	0.49	110	451500	126	9	106	11	155
CRW_00437	-	0.21	0.21	0.22	54	456247	191	23	166	2	206
CRW_00438	-	0.34	0.32	0.37	87	454343	161	16	135	10	181
CRW_00441	-	0.17	0.16	0.18	42	454353	190	32	154	4	220
CRW_00442	-	0.38	0.36	0.40	94	453393	149	25	116	8	167
CRW_00443	-	0.38	0.36	0.41	93	456264	154	19	114	21	167
CRW_00444	-	0.30	0.29	0.32	76	459122	172	24	139	9	187
CRW_00445	-	0.30	0.28	0.33	75	458173	164	23	132	9	190
CRW_00446	-	0.36	0.33	0.38	88	468765	157	17	126	14	177
CRW_00447	-	0.33	0.32	0.35	82	452443	167	16	135	16	178
CRW_00448	-	0.34	0.33	0.36	85	457211	168	28	122	18	176
CRW_00449	-	0.15	0.15	0.16	38	444860	198	34	164	0	222
CRW_00450	-	0.34	0.32	0.36	83	458172	162	19	129	14	179
CRW_00451	-	0.24	0.22	0.26	59	457222	181	21	144	16	205
CRW_00452	-	0.29	0.26	0.31	69	453407	169	26	126	17	193
CRW_00453	-	0.23	0.21	0.24	56	452447	180	35	138	7	205
CRW_00456	-	0.44	0.41	0.47	108	470706	137	19	102	16	157
CRW_00457	-	0.38	0.36	0.40	95	467788	159	28	117	14	169
CRW_00458	-	0.46	0.44	0.48	115	464891	141	21	103	17	149
CRW_00459	-	0.55	0.51	0.58	135	462008	117	16	82	19	128
CRW_00462	-	0.18	0.16	0.19	43	458180	198	21	159	18	218
CRW_00463	-	0.39	0.38	0.40	97	445799	154	21	123	10	157
CRW_00464	-	0.38	0.35	0.42	92	462021	139	14	114	11	172
CRW_00530	-	0.26	0.28	0.25	74	534802	233	55	164	14	194
CRW_00538	-	0.19	0.20	0.18	59	811850	285	65	201	19	241
CRW_00604	-	0.82	0.86	0.79	70	411689	188	10	9	169	11
CRW_00605	-	0.69	0.70	0.69	49	183850	123	6	16	101	21
CRW_00606	-	0.87	0.84	0.91	77	559068	251	0	8	243	15
CRW_00607	-	0.54	0.53	0.55	41	536056	268	10	23	235	36
CRW_00608	-	0.86	0.84	0.89	66	35704	18	0	8	10	13
CRW_00610	Intron_gpI links to Rfam database...	0.45	0.44	0.46	36	36236	43	6	37	0	45
CRW_00611	-	0.61	0.60	0.63	45	31303	34	1	26	7	30
CRW_00612	-	0.59	0.60	0.58	56	270383	169	1	40	128	37
CRW_00613	Intron_gpI links to Rfam database...	0.63	0.58	0.68	45	34914	29	1	20	8	33
CRW_00614	Intron_gpI links to Rfam database...	0.09	0.11	0.08	6	121694	140	20	51	69	51
CRW_00615	-	0.50	0.56	0.45	46	553776	279	21	35	223	36
CRW_00617	-	0.41	0.45	0.38	29	426349	237	15	33	189	35
CRW_00618	Intron_gpI links to Rfam database...	0.18	0.20	0.17	12	56210	83	10	48	25	49
CRW_00619	Intron_gpI links to Rfam database...	0.37	0.42	0.33	31	164931	138	28	35	75	42
CRW_00620	Intron_gpI links to Rfam database...	0.16	0.21	0.12	13	150870	160	31	61	68	50
CRW_00621	Intron_gpI links to Rfam database...	0.25	0.25	0.26	18	153111	144	9	43	92	53
CRW_00623	Intron_gpI links to Rfam database...	0.31	0.29	0.32	24	129721	119	11	39	69	59
CRW_00626	-	0.57	0.58	0.57	60	100920	70	9	36	25	44
CRW_00629	-	0.52	0.52	0.52	64	91256	60	18	40	2	58
CRW_00632	-	0.56	0.55	0.56	71	82901	62	9	47	6	57
CRW_00633	Intron_gpI links to Rfam database...	0.69	0.67	0.71	71	63446	33	8	21	4	35
CRW_00634	Intron_gpI links to Rfam database...	0.33	0.34	0.33	32	64522	70	14	52	4	62
CRW_00635	-	0.45	0.45	0.45	61	109142	85	10	65	10	76
CRW_00636	-	0.52	0.51	0.53	73	114821	71	10	56	5	70
CRW_00637	-	0.47	0.47	0.47	74	133745	90	17	67	6	84
CRW_00639	-	0.74	0.75	0.73	104	126614	53	14	24	15	34
CRW_00641	-	0.44	0.46	0.43	35	39821	56	9	38	9	41
CRW_00642	-	0.41	0.45	0.38	29	47201	56	12	36	8	36
CRW_00643	-	0.45	0.48	0.42	59	123115	93	27	55	11	63
CRW_00645	-	0.77	0.81	0.74	54	35438	28	8	11	9	13
CRW_00646	-	0.51	0.53	0.50	34	34912	39	6	28	5	30
CRW_00648	-	0.60	0.63	0.57	93	137911	74	17	54	3	55
CRW_00649	-	0.60	0.61	0.59	76	204352	121	2	50	69	48
CRW_00650	-	0.52	0.51	0.52	73	112910	71	9	58	4	69
CRW_00651	-	0.43	0.45	0.42	54	99999	79	8	67	4	67
CRW_00652	-	0.57	0.57	0.58	74	132227	81	7	47	27	56
CRW_00653	-	0.66	0.65	0.67	87	94700	47	6	37	4	47
CRW_00654	-	0.70	0.67	0.73	83	78096	36	4	27	5	41
CRW_00655	-	0.87	0.85	0.89	106	89134	18	7	6	5	18
CRW_00656	-	0.46	0.44	0.48	57	90406	67	9	53	5	72
CRW_00657	-	0.75	0.74	0.77	101	105898	35	2	29	4	35
CRW_00658	-	0.48	0.48	0.47	49	74587	58	22	33	3	53
CRW_00659	-	0.37	0.41	0.34	25	32312	52	16	32	4	36
CRW_00660	-	0.54	0.55	0.54	33	22094	31	7	21	3	27
CRW_00661	-	0.20	0.22	0.18	11	24249	52	16	34	2	40
CRW_00662	-	0.36	0.37	0.36	24	28613	50	7	36	7	41
CRW_00663	-	0.00	0.00	0.00	0	26039	67	11	56	0	61
CRW_00664	-	0.17	0.18	0.16	14	53538	79	16	60	3	64
CRW_00665	-	0.17	0.19	0.16	9	23596	51	10	38	3	39
CRW_00666	-	0.51	0.52	0.50	65	96010	78	11	55	12	61
CRW_00668	-	0.36	0.38	0.33	57	163707	126	24	90	12	93
CRW_00669	-	0.39	0.40	0.39	48	97337	78	18	58	2	71
CRW_00670	Intron_gpI links to Rfam database...	0.79	0.74	0.83	89	70018	21	6	12	3	31
CRW_00671	Intron_gpI links to Rfam database...	0.65	0.62	0.68	72	62729	39	7	27	5	45
CRW_00672	Intron_gpI links to Rfam database...	0.48	0.49	0.47	54	72275	65	19	42	4	57
CRW_00673	-	0.79	0.83	0.76	87	100014	47	22	5	20	18
CRW_00674	Intron_gpI links to Rfam database...	0.58	0.56	0.62	69	83324	45	7	36	2	55
CRW_00676	Intron_gpI links to Rfam database...	0.54	0.55	0.53	63	93410	69	15	40	14	52
CRW_00677	-	0.53	0.53	0.52	56	71902	59	13	39	7	49
CRW_00678	-	0.41	0.45	0.37	55	666287	299	23	70	206	66
CRW_00679	-	0.22	0.22	0.22	24	76525	93	14	73	6	83
CRW_00680	-	0.32	0.36	0.28	44	516477	258	32	83	143	78
CRW_00681	-	0.46	0.50	0.43	56	112920	87	19	55	13	56
CRW_00683	-	0.50	0.50	0.49	68	460182	221	18	52	151	67
CRW_00684	-	0.35	0.37	0.32	50	612016	279	36	69	174	85
CRW_00685	-	0.39	0.42	0.36	45	156956	113	21	58	34	61
CRW_00686	-	0.49	0.50	0.49	62	95139	73	8	57	8	63
CRW_00687	-	0.66	0.70	0.62	46	28606	32	8	20	4	20
CRW_00688	-	0.75	0.77	0.73	44	21885	17	7	9	1	13
CRW_00689	-	0.65	0.68	0.63	52	33588	32	11	19	2	25
CRW_00690	-	0.62	0.59	0.64	41	33347	30	7	16	7	28
CRW_00691	-	0.58	0.60	0.56	40	27190	33	6	25	2	27
CRW_00692	Intron_gpI links to Rfam database...	0.20	0.21	0.19	19	68537	84	24	55	5	71
CRW_00693	-	0.58	0.57	0.58	70	89133	59	7	43	9	52
CRW_00694	-	0.63	0.63	0.63	77	85782	52	6	40	6	45
CRW_00699	-	0.62	0.61	0.62	77	91682	48	6	41	1	49
CRW_00700	-	0.63	0.63	0.63	93	180753	87	11	44	32	54
CRW_00702	-	0.57	0.64	0.51	48	357341	200	16	30	154	27
CRW_00703	-	0.53	0.58	0.49	38	40393	46	15	24	7	28
CRW_00704	-	0.80	0.79	0.82	74	386670	190	4	12	174	20
CRW_00706	-	0.37	0.41	0.34	24	695539	343	11	36	296	35
CRW_00713	-	0.67	0.65	0.69	66	731349	298	5	25	268	35
CRW_00714	-	0.20	0.22	0.18	24	186224	160	28	79	53	83
CRW_00715	-	0.76	0.73	0.78	76	69281	24	3	18	3	28
CRW_00716	-	0.34	0.34	0.34	30	193664	145	10	49	86	59
CRW_00717	-	0.66	0.66	0.66	98	153587	65	8	42	15	50
CRW_00718	-	0.78	0.74	0.82	142	189862	49	3	29	17	49
CRW_00719	-	0.56	0.57	0.55	52	230087	143	9	33	101	39
CRW_00720	-	0.14	0.15	0.13	14	208228	168	21	72	75	77
CRW_00721	-	0.52	0.59	0.47	40	58567	61	17	29	15	28
CRW_00764	-	0.08	0.08	0.08	15	252920	182	41	140	1	181
CRW_00765	-	0.24	0.24	0.24	62	452416	208	36	162	10	195
CRW_00766	-	0.23	0.22	0.23	53	440165	188	28	145	15	187
CRW_00768	-	0.56	0.54	0.58	141	471663	124	14	88	22	118
CRW_00769	-	0.37	0.35	0.39	88	451499	151	24	114	13	164
CRW_00773	-	0.47	0.47	0.48	121	451471	151	28	105	18	138
CRW_00774	-	0.34	0.32	0.37	85	488335	171	20	126	25	178
CRW_00775	-	0.12	0.12	0.11	26	314584	213	61	150	2	186
CRW_00777	-	0.29	0.29	0.29	88	719096	251	36	180	35	216
CRW_00780	-	0.36	0.35	0.37	89	475561	163	24	126	13	166
CRW_00783	-	0.35	0.34	0.36	87	453385	167	15	141	11	172
CRW_00784	-	0.34	0.33	0.36	86	456249	169	29	126	14	176
CRW_00785	-	0.30	0.29	0.32	73	452445	165	31	127	7	180
CRW_00787	-	0.23	0.24	0.23	72	646633	257	40	208	9	234
CRW_00794	-	0.23	0.23	0.23	56	434530	209	20	172	17	190
CRW_00796	-	0.25	0.23	0.26	55	384793	177	24	131	22	180
CRW_00797	-	0.29	0.29	0.29	98	692914	265	38	203	24	244
CRW_00801	-	0.46	0.45	0.46	113	438272	150	28	103	19	136
CRW_00802	-	0.25	0.24	0.25	61	460079	192	36	144	12	192
CRW_00813	-	0.17	0.20	0.14	27	530778	295	47	113	135	106
CRW_00815	-	0.56	0.56	0.56	88	159739	78	15	53	10	70
CRW_00816	-	0.36	0.38	0.35	49	143775	111	18	74	19	80
CRW_00820	-	0.56	0.57	0.55	83	136352	79	16	52	11	62
CRW_01186	-	0.23	0.23	0.23	89	836190	303	44	248	11	297
CRW_01250	-	0.24	0.23	0.24	87	781517	284	38	233	13	291
CRW_01266	-	0.24	0.24	0.24	91	818175	306	39	255	12	290
CRW_01271	-	0.30	0.30	0.29	113	827157	283	32	239	12	268
CRW_01344	-	0.34	0.33	0.34	122	791557	238	42	190	6	244
PDB_00005	Tymo_tRNA-like links to Rfam database...	0.88	0.79	1.00	11	935	0	0	0	0	3
PDB_00018	-	0.20	0.20	0.22	4	1017	14	2	12	0	16
PDB_00020	-	0.38	0.35	0.44	7	764	9	0	9	0	13
PDB_00041	-	0.70	0.50	1.00	6	624	0	0	0	0	6
PDB_00053	-	0.73	0.55	1.00	6	429	0	0	0	0	5
PDB_00056	-	0.93	0.88	1.00	14	616	0	0	0	0	2
PDB_00072	-	0.38	0.39	0.38	81	148025	134	10	124	0	129
PDB_00078	-	0.44	0.42	0.48	48	49669	53	6	47	0	67
PDB_00079	-	0.64	0.60	0.68	85	121646	69	9	31	29	57
PDB_00123	-	-0.01	0.00	0.00	0	4151	35	0	35	0	36
PDB_00124	-	0.59	0.50	0.71	5	489	2	0	2	0	5
PDB_00128	-	0.80	0.71	0.91	10	485	1	0	1	0	4
PDB_00134	-	0.79	0.63	1.00	5	373	0	0	0	0	3
PDB_00138	-	0.79	0.63	1.00	5	373	0	0	0	0	3
PDB_00209	-	0.56	0.45	0.71	5	554	2	0	2	0	6
PDB_00243	-	0.63	0.58	0.70	7	620	3	0	3	0	5
PDB_00278	-	0.19	0.19	0.19	14	24904	58	7	51	0	58
PDB_00352	-	0.89	0.79	1.00	15	1210	0	0	0	0	4
PDB_00370	-	0.09	0.12	0.07	3	15179	45	12	31	2	22
PDB_00403	-	0.52	0.53	0.51	81	124592	85	16	61	8	72
PDB_00409	-	0.32	0.37	0.27	90	688221	309	74	166	69	155
PDB_00423	-	0.17	0.16	0.18	12	26731	53	2	51	0	62
PDB_00447	-	0.44	0.39	0.52	17	7107	16	6	10	0	27
PDB_00571	tRNA links to Rfam database...	0.21	0.20	0.24	5	3300	16	6	10	0	20
PDB_00701	-	0.47	0.45	0.49	49	45351	52	5	46	1	60
PDB_00713	-	0.43	0.43	0.45	9	1996	11	0	11	0	12
PDB_00716	HDV_ribozyme links to Rfam database...	-0.01	0.00	0.00	0	2677	24	5	19	0	23
PDB_00747	-	0.66	0.60	0.73	48	24465	18	0	18	0	32
PDB_00804	-	0.19	0.20	0.18	10	15344	46	10	36	0	40
PDB_00805	-	0.64	0.61	0.68	184	467756	111	11	77	23	118
PDB_00827	Intron_gpI links to Rfam database...	0.58	0.52	0.66	42	26964	23	1	21	1	39
PDB_00828	Purine links to Rfam database...	0.88	0.78	1.00	21	2464	0	0	0	0	6
PDB_00829	Purine links to Rfam database...	0.86	0.75	1.00	18	2260	0	0	0	0	6
PDB_00842	-	0.79	0.63	1.00	5	373	0	0	0	0	3
PDB_00851	-	0.45	0.39	0.53	16	4723	14	0	14	0	25
PDB_00857	-	0.54	0.40	0.75	6	1073	2	0	2	0	9
PDB_00874	-	0.10	0.10	0.14	2	932	12	2	10	0	18
PDB_00886	-	-0.01	0.00	0.00	0	4148	38	0	38	0	40
PDB_00917	-	0.49	0.47	0.51	45	35157	49	4	39	6	50
PDB_00918	-	0.75	0.57	1.00	4	321	0	0	0	0	3
PDB_00919	RNaseP_bact_a links to Rfam database...	0.50	0.47	0.55	48	44165	43	3	37	3	55
PDB_01009	tRNA links to Rfam database...	0.52	0.57	0.48	12	2460	13	5	8	0	9
PDB_01020	Purine links to Rfam database...	0.86	0.74	1.00	17	2261	1	0	0	1	6
PDB_01040	-	0.30	0.30	0.32	6	1109	13	0	13	0	14
PDB_01059	-	0.75	0.57	1.00	4	227	0	0	0	0	3
PDB_01070	-	0.31	0.30	0.33	16	12671	34	2	31	1	38
PDB_01073	SAM links to Rfam database...	0.52	0.47	0.57	16	4343	13	2	10	1	18
PDB_01092	glmS links to Rfam database...	0.74	0.65	0.83	34	10112	8	1	6	1	18
PDB_01129	-	0.27	0.28	0.26	20	35434	62	15	42	5	51
PDB_01157	-	0.29	0.29	0.30	28	49993	65	9	56	0	70
PDB_01166	-	0.44	0.42	0.46	88	181914	110	21	83	6	124
PDB_01194	-	-0.02	0.00	0.00	0	488	8	0	8	0	15
PDB_01201	-	0.85	0.73	1.00	16	1112	0	0	0	0	6
PDB_01203	-	0.71	0.63	0.80	12	1161	3	2	1	0	7
PDB_01250	-	0.10	0.10	0.12	4	12056	30	7	23	0	37
PDB_01260	-	0.53	0.44	0.65	11	1813	6	0	6	0	14
PDB_01261	-	0.50	0.45	0.55	152	467750	130	4	122	4	184
PDB_01281	-	-0.03	0.00	0.00	0	366	12	0	12	0	14
PDB_01299	-	0.74	0.67	0.83	10	891	2	1	1	0	5
PDB_01309	-	-0.01	0.00	0.00	0	9122	58	7	51	0	39
RFA_00597	Telomerase-vert links to Rfam database...	0.50	0.50	0.50	55	97792	79	9	47	23	54
RFA_00598	Telomerase-vert links to Rfam database...	0.68	0.64	0.71	65	84575	52	6	20	26	36
RFA_00599	Telomerase-vert links to Rfam database...	0.67	0.70	0.63	78	101352	64	17	28	19	33
RFA_00600	Telomerase-vert links to Rfam database...	0.62	0.69	0.56	69	120172	85	29	25	31	31
RFA_00601	Telomerase-vert links to Rfam database...	0.47	0.49	0.44	56	99109	89	21	49	19	58
RFA_00602	Telomerase-vert links to Rfam database...	0.51	0.53	0.48	62	101347	86	18	48	20	54
RFA_00632	HDV_ribozyme links to Rfam database...	0.34	0.36	0.33	10	4065	20	2	18	0	18
RFA_00636	HDV_ribozyme links to Rfam database...	0.43	0.43	0.44	12	3978	15	2	13	0	16
RFA_00767	Corona_pk3 links to Rfam database...	0.63	0.56	0.71	10	1877	4	0	4	0	8
RFA_00768	Corona_pk3 links to Rfam database...	0.48	0.44	0.53	8	1876	7	1	6	0	10
RFA_00769	Corona_pk3 links to Rfam database...	0.54	0.56	0.53	10	1934	9	4	5	0	8
RFA_00770	Corona_pk3 links to Rfam database...	0.61	0.56	0.67	10	2001	8	0	5	3	8
RFA_00773	Corona_pk3 links to Rfam database...	0.71	0.56	0.91	10	1942	4	1	0	3	8
RFA_00779	Corona_pk3 links to Rfam database...	0.55	0.56	0.56	10	1935	8	3	5	0	8
RFA_00808	RydC links to Rfam database...	-0.01	0.00	0.00	0	2001	15	2	13	0	16
RFA_00809	RydC links to Rfam database...	0.37	0.38	0.38	6	2129	10	1	9	0	10
TMR_00007	tmRNA links to Rfam database...	0.29	0.28	0.30	30	61677	74	11	58	5	78
TMR_00008	tmRNA links to Rfam database...	0.50	0.48	0.52	51	65967	59	10	38	11	55
TMR_00010	tmRNA links to Rfam database...	0.30	0.31	0.30	30	57869	71	14	57	0	66
TMR_00012	tmRNA links to Rfam database...	0.28	0.28	0.27	23	64536	76	20	41	15	58
TMR_00014	tmRNA links to Rfam database...	0.52	0.50	0.54	55	68533	54	12	35	7	55
TMR_00017	tmRNA links to Rfam database...	0.38	0.38	0.39	39	67060	68	15	47	6	63
TMR_00018	tmRNA links to Rfam database...	0.25	0.26	0.24	24	64521	81	11	64	6	68
TMR_00028	tmRNA links to Rfam database...	0.39	0.41	0.37	40	62726	72	15	54	3	57
TMR_00030	tmRNA links to Rfam database...	0.20	0.21	0.20	23	75741	96	12	79	5	88
TMR_00034	tmRNA links to Rfam database...	0.63	0.60	0.66	66	59931	41	6	28	7	44
TMR_00035	tmRNA links to Rfam database...	0.33	0.35	0.32	34	67791	76	9	62	5	64
TMR_00036	tmRNA links to Rfam database...	0.57	0.57	0.57	58	90424	72	11	32	29	43
TMR_00038	tmRNA links to Rfam database...	0.25	0.25	0.25	28	71142	87	12	71	4	82
TMR_00042	tmRNA links to Rfam database...	0.29	0.30	0.29	29	62736	73	8	62	3	69
TMR_00046	tmRNA links to Rfam database...	0.56	0.56	0.57	54	62740	47	7	34	6	42
TMR_00047	tmRNA links to Rfam database...	0.26	0.30	0.23	17	48442	73	16	41	16	40
TMR_00048	tmRNA links to Rfam database...	0.33	0.35	0.31	33	64874	78	9	64	5	62
TMR_00049	tmRNA links to Rfam database...	0.53	0.54	0.52	47	63099	56	9	35	12	40
TMR_00051	tmRNA links to Rfam database...	0.65	0.61	0.70	57	65621	44	2	23	19	37
TMR_00055	tmRNA links to Rfam database...	0.12	0.13	0.12	15	78874	114	25	89	0	99
TMR_00057	tmRNA links to Rfam database...	0.07	0.09	0.06	7	73812	109	31	70	8	72
TMR_00061	tmRNA links to Rfam database...	0.24	0.25	0.24	25	59580	87	11	69	7	74
TMR_00062	tmRNA links to Rfam database...	0.56	0.57	0.55	59	78499	63	8	40	15	45
TMR_00064	tmRNA links to Rfam database...	0.27	0.27	0.27	28	76923	77	20	57	0	75
TMR_00065	tmRNA links to Rfam database...	0.44	0.44	0.43	47	76527	63	12	50	1	59
TMR_00067	tmRNA links to Rfam database...	0.35	0.36	0.34	41	82095	83	11	68	4	73
TMR_00073	tmRNA links to Rfam database...	0.43	0.43	0.43	50	65588	65	5	60	0	67
TMR_00076	tmRNA links to Rfam database...	0.32	0.33	0.32	33	70772	77	14	57	6	67
TMR_00080	tmRNA links to Rfam database...	0.61	0.61	0.61	59	70403	41	10	28	3	37
TMR_00081	tmRNA links to Rfam database...	0.47	0.45	0.48	48	67062	52	12	39	1	58
TMR_00082	tmRNA links to Rfam database...	0.59	0.58	0.60	56	67802	43	12	26	5	40
TMR_00083	tmRNA links to Rfam database...	0.43	0.43	0.44	45	68162	66	15	43	8	60
TMR_00092	tmRNA links to Rfam database...	0.55	0.57	0.53	58	67418	56	14	38	4	43
TMR_00093	tmRNA links to Rfam database...	0.42	0.43	0.41	44	64153	66	14	50	2	58
TMR_00096	tmRNA links to Rfam database...	0.12	0.12	0.12	12	64882	94	16	70	8	88
TMR_00101	tmRNA links to Rfam database...	0.33	0.33	0.33	35	64155	76	10	61	5	72
TMR_00102	tmRNA links to Rfam database...	0.26	0.28	0.25	28	64150	86	16	67	3	73
TMR_00103	tmRNA links to Rfam database...	0.57	0.56	0.57	61	64154	50	8	38	4	47
TMR_00104	-	0.09	0.10	0.08	7	66702	92	33	53	6	63
TMR_00106	tmRNA links to Rfam database...	0.50	0.52	0.48	62	89970	72	16	52	4	58
TMR_00109	tmRNA links to Rfam database...	0.31	0.30	0.32	36	88298	79	15	61	3	86
TMR_00111	tmRNA links to Rfam database...	0.45	0.45	0.45	55	90403	71	12	55	4	67
TMR_00116	tmRNA links to Rfam database...	0.57	0.56	0.58	58	64880	54	5	37	12	46
TMR_00117	tmRNA links to Rfam database...	0.58	0.57	0.59	67	80086	56	8	39	9	51
TMR_00118	tmRNA links to Rfam database...	0.40	0.40	0.41	48	81288	77	8	62	7	72
TMR_00119	tmRNA links to Rfam database...	0.49	0.49	0.49	51	71905	60	8	46	6	53
TMR_00123	tmRNA links to Rfam database...	0.17	0.17	0.17	17	66327	92	11	75	6	84
TMR_00124	tmRNA links to Rfam database...	0.47	0.48	0.46	47	70397	70	15	41	14	51
TMR_00125	tmRNA links to Rfam database...	0.20	0.20	0.20	20	64159	86	17	65	4	79
TMR_00127	tmRNA links to Rfam database...	0.58	0.57	0.60	55	62743	43	9	28	6	42
TMR_00128	tmRNA links to Rfam database...	0.36	0.36	0.36	35	60979	61	11	50	0	61
TMR_00131	tmRNA links to Rfam database...	0.29	0.28	0.30	28	64886	73	12	54	7	71
TMR_00135	tmRNA links to Rfam database...	0.59	0.56	0.63	55	62747	43	4	29	10	44
TMR_00136	tmRNA links to Rfam database...	0.19	0.20	0.18	20	74581	93	21	69	3	81
TMR_00137	tmRNA links to Rfam database...	0.16	0.17	0.16	15	60979	89	14	67	8	74
TMR_00139	tmRNA links to Rfam database...	0.57	0.62	0.54	56	62024	55	18	30	7	35
TMR_00140	tmRNA links to Rfam database...	0.49	0.49	0.50	49	73822	65	10	39	16	51
TMR_00142	tmRNA links to Rfam database...	0.57	0.61	0.54	62	70761	53	21	32	0	40
TMR_00143	tmRNA links to Rfam database...	0.48	0.49	0.49	50	64517	63	9	44	10	53
TMR_00144	tmRNA links to Rfam database...	0.26	0.27	0.24	28	74189	90	15	73	2	75
TMR_00146	tmRNA links to Rfam database...	0.87	0.88	0.86	37	32088	34	2	4	28	5
TMR_00150	tmRNA links to Rfam database...	0.71	0.71	0.70	30	43028	52	3	10	39	12
TMR_00152	tmRNA links to Rfam database...	0.26	0.26	0.26	30	81291	96	10	75	11	85
TMR_00155	tmRNA links to Rfam database...	0.39	0.37	0.41	38	61683	64	5	50	9	66
TMR_00156	tmRNA links to Rfam database...	0.36	0.36	0.36	35	60282	61	12	49	0	62
TMR_00158	tmRNA links to Rfam database...	0.37	0.35	0.39	35	60637	60	5	49	6	64
TMR_00159	tmRNA links to Rfam database...	0.36	0.36	0.36	33	62036	70	13	46	11	59
TMR_00160	tmRNA links to Rfam database...	0.45	0.44	0.45	42	64527	59	13	38	8	53
TMR_00164	tmRNA links to Rfam database...	0.29	0.28	0.30	30	66696	77	10	59	8	76
TMR_00165	tmRNA links to Rfam database...	0.30	0.32	0.29	31	61669	85	12	64	9	66
TMR_00166	tmRNA links to Rfam database...	0.30	0.29	0.32	29	61685	65	7	55	3	72
TMR_00168	tmRNA links to Rfam database...	0.68	0.66	0.71	75	60969	36	3	28	5	39
TMR_00173	tmRNA links to Rfam database...	0.32	0.36	0.28	15	42142	64	16	22	26	27
TMR_00179	tmRNA links to Rfam database...	0.52	0.53	0.51	52	67060	60	10	39	11	46
TMR_00180	tmRNA links to Rfam database...	0.63	0.63	0.63	62	67063	49	8	28	13	37
TMR_00182	tmRNA links to Rfam database...	0.11	0.12	0.11	12	66322	100	13	83	4	90
TMR_00183	tmRNA links to Rfam database...	0.18	0.17	0.18	18	63090	87	6	76	5	85
TMR_00184	tmRNA links to Rfam database...	0.40	0.40	0.40	41	63087	64	4	58	2	61
TMR_00193	tmRNA links to Rfam database...	0.43	0.44	0.43	35	59258	56	12	35	9	45
TMR_00194	tmRNA links to Rfam database...	0.48	0.48	0.47	45	62740	61	10	40	11	48
TMR_00196	tmRNA links to Rfam database...	0.38	0.38	0.39	37	60979	64	8	51	5	60
TMR_00199	tmRNA links to Rfam database...	0.48	0.49	0.47	45	62739	58	21	30	7	47
TMR_00200	-	0.56	0.56	0.57	42	41542	42	3	29	10	33
TMR_00204	tmRNA links to Rfam database...	0.39	0.40	0.39	39	60277	68	16	46	6	58
TMR_00207	tmRNA links to Rfam database...	0.25	0.24	0.26	25	72292	80	6	67	7	78
TMR_00223	tmRNA links to Rfam database...	0.10	0.11	0.10	10	64165	90	15	71	4	85
TMR_00224	tmRNA links to Rfam database...	0.36	0.37	0.36	37	64876	67	11	56	0	64
TMR_00226	tmRNA links to Rfam database...	0.30	0.32	0.29	34	69632	86	16	69	1	71
TMR_00227	tmRNA links to Rfam database...	0.21	0.22	0.20	22	70013	93	11	79	3	79
TMR_00228	tmRNA links to Rfam database...	0.29	0.31	0.27	34	88283	98	24	69	5	74
TMR_00234	tmRNA links to Rfam database...	0.30	0.31	0.29	32	58887	81	8	69	4	70
TMR_00238	tmRNA links to Rfam database...	0.20	0.22	0.19	22	84551	99	23	70	6	79
TMR_00239	tmRNA links to Rfam database...	0.63	0.65	0.62	62	61676	40	7	31	2	34
TMR_00240	tmRNA links to Rfam database...	0.20	0.21	0.20	18	63098	77	15	59	3	67
TMR_00246	-	0.43	0.50	0.38	17	78165	113	6	22	85	17
TMR_00248	tmRNA links to Rfam database...	0.13	0.16	0.10	6	54226	87	25	28	34	32
TMR_00257	tmRNA links to Rfam database...	0.20	0.19	0.20	19	67068	78	8	66	4	79
TMR_00259	tmRNA links to Rfam database...	0.58	0.57	0.58	59	67795	45	13	29	3	44
TMR_00261	tmRNA links to Rfam database...	0.52	0.52	0.52	53	66694	53	14	34	5	48
TMR_00262	tmRNA links to Rfam database...	0.49	0.51	0.47	53	74192	60	19	41	0	51
TMR_00271	tmRNA links to Rfam database...	0.47	0.46	0.48	42	64173	54	7	39	8	49
TMR_00274	tmRNA links to Rfam database...	0.30	0.30	0.29	32	66684	84	13	66	5	73
TMR_00278	tmRNA links to Rfam database...	0.43	0.44	0.42	45	67789	71	7	55	9	57
TMR_00279	tmRNA links to Rfam database...	0.52	0.52	0.52	49	68912	55	7	38	10	45
TMR_00280	tmRNA links to Rfam database...	0.34	0.35	0.34	35	65963	81	8	60	13	66
TMR_00283	tmRNA links to Rfam database...	0.41	0.44	0.39	42	65234	68	19	46	3	54
TMR_00289	tmRNA links to Rfam database...	0.59	0.59	0.59	58	67063	52	11	29	12	40
TMR_00290	tmRNA links to Rfam database...	0.21	0.22	0.21	20	64164	85	15	62	8	72
TMR_00296	tmRNA links to Rfam database...	0.29	0.30	0.29	29	68907	78	18	52	8	69
TMR_00298	tmRNA links to Rfam database...	0.47	0.50	0.45	50	68153	66	16	46	4	51
TMR_00300	tmRNA links to Rfam database...	0.53	0.54	0.53	60	70387	63	9	44	10	52
TMR_00301	tmRNA links to Rfam database...	0.35	0.35	0.34	34	82116	74	21	44	9	62
TMR_00302	tmRNA links to Rfam database...	0.34	0.37	0.32	35	77311	82	20	55	7	59
TMR_00305	tmRNA links to Rfam database...	0.69	0.66	0.74	67	60984	32	5	19	8	35
TMR_00306	tmRNA links to Rfam database...	0.11	0.11	0.12	12	64158	93	9	82	2	94
TMR_00310	tmRNA links to Rfam database...	0.60	0.58	0.63	57	63812	38	9	25	4	41
TMR_00317	tmRNA links to Rfam database...	0.60	0.62	0.58	63	68156	49	14	32	3	39
TMR_00331	tmRNA links to Rfam database...	0.50	0.54	0.46	44	66699	66	8	44	14	38
TMR_00332	tmRNA links to Rfam database...	0.28	0.27	0.29	27	67067	71	14	53	4	72
TMR_00334	tmRNA links to Rfam database...	0.28	0.28	0.28	28	66696	79	10	61	8	73
TMR_00337	tmRNA links to Rfam database...	0.55	0.53	0.57	63	82918	51	14	33	4	56
TMR_00340	tmRNA links to Rfam database...	0.37	0.38	0.36	31	64176	74	5	49	20	50
TMR_00341	tmRNA links to Rfam database...	0.20	0.22	0.19	20	63084	89	23	63	3	72
TMR_00343	tmRNA links to Rfam database...	0.32	0.30	0.33	32	64884	72	12	52	8	73
TMR_00345	tmRNA links to Rfam database...	0.47	0.46	0.48	48	63803	60	9	43	8	56
TMR_00346	tmRNA links to Rfam database...	0.49	0.51	0.47	48	64158	57	15	40	2	46
TMR_00348	tmRNA links to Rfam database...	0.23	0.23	0.22	23	77317	98	13	68	17	76
TMR_00352	tmRNA links to Rfam database...	0.39	0.41	0.36	31	95181	92	18	36	38	44
TMR_00353	tmRNA links to Rfam database...	0.51	0.53	0.49	56	84140	68	21	38	9	49
TMR_00357	tmRNA links to Rfam database...	0.40	0.41	0.40	38	82932	75	20	38	17	54
TMR_00358	tmRNA links to Rfam database...	0.61	0.60	0.62	59	74983	54	17	19	18	40
TMR_00361	-	0.29	0.35	0.25	25	93427	94	26	50	18	47
TMR_00366	tmRNA links to Rfam database...	0.31	0.30	0.31	30	67800	79	10	56	13	70
TMR_00372	tmRNA links to Rfam database...	0.58	0.59	0.58	57	70401	53	7	35	11	39
TMR_00374	tmRNA links to Rfam database...	0.37	0.40	0.34	37	81701	77	24	48	5	55
TMR_00375	tmRNA links to Rfam database...	0.47	0.48	0.46	47	73433	66	17	39	10	51
TMR_00376	tmRNA links to Rfam database...	0.46	0.46	0.45	44	74594	70	17	36	17	51
TMR_00378	tmRNA links to Rfam database...	0.29	0.30	0.28	29	67792	86	7	68	11	68
TMR_00383	tmRNA links to Rfam database...	0.20	0.21	0.19	21	66686	96	20	68	8	79
TMR_00384	tmRNA links to Rfam database...	0.33	0.31	0.36	34	65608	68	2	59	7	74
TMR_00393	tmRNA links to Rfam database...	0.57	0.62	0.52	33	53238	56	13	17	26	20
TMR_00395	tmRNA links to Rfam database...	0.39	0.37	0.42	40	64524	60	6	50	4	69
TMR_00398	tmRNA links to Rfam database...	0.67	0.64	0.70	68	65244	35	2	27	6	38
TMR_00399	tmRNA links to Rfam database...	0.29	0.31	0.28	29	64875	80	23	53	4	65
TMR_00404	tmRNA links to Rfam database...	0.21	0.23	0.20	21	67425	94	23	59	12	71
TMR_00408	tmRNA links to Rfam database...	0.63	0.65	0.61	57	65972	48	13	24	11	31
TMR_00409	tmRNA links to Rfam database...	0.69	0.74	0.64	34	68582	73	7	12	54	12
TMR_00411	tmRNA links to Rfam database...	0.51	0.52	0.50	45	60985	50	12	33	5	42
TMR_00415	tmRNA links to Rfam database...	0.35	0.35	0.35	35	67062	67	13	51	3	66
TMR_00419	tmRNA links to Rfam database...	0.33	0.32	0.35	35	81709	84	9	57	18	76
TMR_00422	tmRNA links to Rfam database...	0.52	0.52	0.52	48	67803	54	10	35	9	44
TMR_00423	tmRNA links to Rfam database...	0.08	0.10	0.07	7	63799	106	25	72	9	66
TMR_00427	tmRNA links to Rfam database...	0.33	0.33	0.33	32	67430	69	11	55	3	65
TMR_00429	tmRNA links to Rfam database...	0.50	0.48	0.52	52	74591	57	7	41	9	57
TMR_00430	tmRNA links to Rfam database...	0.29	0.30	0.28	33	82502	86	20	66	0	76
TMR_00431	tmRNA links to Rfam database...	0.68	0.69	0.68	38	51947	63	8	10	45	17
TMR_00432	tmRNA links to Rfam database...	0.21	0.22	0.20	23	79687	96	17	73	6	81
TMR_00433	tmRNA links to Rfam database...	0.31	0.32	0.31	34	80089	82	10	67	5	72
TMR_00439	tmRNA links to Rfam database...	0.39	0.42	0.38	42	68523	80	21	49	10	59
TMR_00441	tmRNA links to Rfam database...	0.14	0.16	0.13	13	62028	95	24	63	8	70
TMR_00443	tmRNA links to Rfam database...	0.37	0.38	0.36	39	67053	71	13	56	2	65
TMR_00448	tmRNA links to Rfam database...	0.31	0.33	0.30	30	62028	76	12	58	6	62
TMR_00451	tmRNA links to Rfam database...	0.22	0.24	0.21	21	63448	83	14	63	6	68
TMR_00457	tmRNA links to Rfam database...	0.55	0.54	0.56	55	78507	51	10	34	7	47
TMR_00458	tmRNA links to Rfam database...	0.15	0.15	0.15	14	63450	89	19	63	7	79
TMR_00460	tmRNA links to Rfam database...	0.43	0.44	0.43	47	79291	71	13	50	8	59
TMR_00465	tmRNA links to Rfam database...	0.24	0.26	0.23	24	64155	82	23	59	0	70
TMR_00469	tmRNA links to Rfam database...	0.40	0.41	0.39	41	64514	65	11	54	0	59
TMR_00472	tmRNA links to Rfam database...	0.33	0.33	0.33	32	64523	77	10	55	12	65
TMR_00478	tmRNA links to Rfam database...	0.44	0.45	0.42	45	71904	67	15	46	6	54
TMR_00498	tmRNA links to Rfam database...	0.46	0.45	0.46	45	68909	63	10	42	11	54
TMR_00499	tmRNA links to Rfam database...	0.20	0.21	0.18	21	64506	100	10	83	7	78
TMR_00501	tmRNA links to Rfam database...	0.37	0.37	0.37	34	62390	62	9	48	5	58
TMR_00502	tmRNA links to Rfam database...	0.22	0.24	0.21	22	75360	93	20	64	9	71
TMR_00503	tmRNA links to Rfam database...	0.34	0.33	0.35	37	67790	76	5	64	7	74
TMR_00519	tmRNA links to Rfam database...	0.19	0.20	0.18	19	63084	97	18	69	10	76
TMR_00520	tmRNA links to Rfam database...	0.46	0.46	0.46	46	63090	64	12	42	10	53
TMR_00522	tmRNA links to Rfam database...	0.36	0.36	0.36	35	63094	70	11	50	9	62
TMR_00528	tmRNA links to Rfam database...	0.30	0.31	0.29	30	63086	84	20	54	10	67
TMR_00540	tmRNA links to Rfam database...	0.42	0.41	0.43	43	73435	66	10	48	8	61
TMR_00541	tmRNA links to Rfam database...	0.42	0.41	0.43	43	61676	65	3	54	8	62
TMR_00544	tmRNA links to Rfam database...	0.31	0.31	0.30	34	89563	85	23	56	6	74
TMR_00547	tmRNA links to Rfam database...	0.50	0.50	0.51	50	65243	50	4	44	2	50
TMR_00553	tmRNA links to Rfam database...	0.44	0.43	0.44	35	48126	50	4	40	6	46
TMR_00559	tmRNA links to Rfam database...	0.41	0.40	0.43	40	62388	57	9	44	4	61
TMR_00560	tmRNA links to Rfam database...	0.40	0.40	0.40	39	60978	67	6	52	9	59
TMR_00562	tmRNA links to Rfam database...	0.26	0.26	0.26	27	72667	85	13	64	8	75
TMR_00563	tmRNA links to Rfam database...	0.37	0.39	0.35	40	75352	81	19	55	7	63
TMR_00566	tmRNA links to Rfam database...	0.25	0.25	0.24	25	60623	82	12	66	4	75
TMR_00568	tmRNA links to Rfam database...	0.35	0.34	0.37	34	60633	65	9	50	6	65
TMR_00570	tmRNA links to Rfam database...	0.37	0.37	0.38	36	60282	70	8	52	10	61
TMR_00571	tmRNA links to Rfam database...	0.32	0.32	0.32	32	60626	75	12	56	7	67
TMR_00576	tmRNA links to Rfam database...	0.29	0.28	0.30	29	60282	72	16	51	5	73
TMR_00579	tmRNA links to Rfam database...	0.23	0.26	0.21	23	80489	98	19	70	9	67
TMR_00580	tmRNA links to Rfam database...	0.26	0.26	0.25	26	60624	77	19	57	1	74
TMR_00581	tmRNA links to Rfam database...	0.14	0.14	0.13	14	62374	100	11	82	7	84
TMR_00584	tmRNA links to Rfam database...	0.52	0.51	0.53	49	60982	55	7	37	11	48
TMR_00586	tmRNA links to Rfam database...	0.23	0.25	0.22	24	60965	87	18	68	1	73
TMR_00587	tmRNA links to Rfam database...	0.72	0.70	0.74	70	61330	30	4	21	5	30
TMR_00588	tmRNA links to Rfam database...	0.21	0.22	0.20	22	77312	96	20	67	9	79
TMR_00594	tmRNA links to Rfam database...	0.21	0.22	0.21	23	79291	91	20	67	4	81
TMR_00596	tmRNA links to Rfam database...	0.16	0.17	0.15	16	78106	98	15	73	10	79
TMR_00599	tmRNA links to Rfam database...	0.16	0.18	0.14	13	63097	90	28	52	10	59
TMR_00600	tmRNA links to Rfam database...	0.18	0.18	0.19	21	79687	94	18	74	2	94
TMR_00601	tmRNA links to Rfam database...	0.46	0.48	0.45	20	58952	81	2	22	57	22
TMR_00603	tmRNA links to Rfam database...	0.55	0.56	0.55	24	60334	76	7	13	56	19
TMR_00604	tmRNA links to Rfam database...	0.65	0.63	0.67	70	62731	38	3	31	4	42
TMR_00605	tmRNA links to Rfam database...	0.54	0.52	0.57	56	74207	49	11	31	7	52
TMR_00606	tmRNA links to Rfam database...	0.38	0.38	0.38	41	68897	73	7	61	5	66
TMR_00609	tmRNA links to Rfam database...	0.63	0.61	0.64	69	63439	40	8	30	2	44
TMR_00610	tmRNA links to Rfam database...	0.57	0.57	0.57	59	62024	57	7	38	12	45
TMR_00611	tmRNA links to Rfam database...	0.43	0.45	0.41	46	61314	65	16	49	0	56
TMR_00612	tmRNA links to Rfam database...	0.41	0.41	0.41	43	60620	69	7	56	6	61
TMR_00614	tmRNA links to Rfam database...	0.55	0.53	0.58	55	60980	49	3	37	9	49
TMR_00615	tmRNA links to Rfam database...	0.56	0.58	0.53	56	63798	52	19	30	3	40
TMR_00616	tmRNA links to Rfam database...	0.35	0.34	0.35	34	67064	68	14	49	5	65
TMR_00617	tmRNA links to Rfam database...	0.38	0.41	0.35	24	34648	54	12	32	10	34
TMR_00623	tmRNA links to Rfam database...	0.39	0.37	0.42	40	61329	60	2	54	4	68
TMR_00624	tmRNA links to Rfam database...	0.48	0.47	0.49	51	62377	65	5	48	12	57
TMR_00625	tmRNA links to Rfam database...	0.22	0.23	0.21	24	78890	93	28	61	4	82
TMR_00626	tmRNA links to Rfam database...	0.37	0.39	0.36	42	67780	78	17	57	4	67
TMR_00680	tmRNA links to Rfam database...	0.20	0.21	0.20	21	67790	94	18	67	9	78
TMR_00681	tmRNA links to Rfam database...	0.56	0.55	0.58	53	65974	49	5	34	10	44
TMR_00683	tmRNA links to Rfam database...	0.33	0.35	0.32	35	82919	78	17	57	4	65
TMR_00686	tmRNA links to Rfam database...	0.45	0.45	0.45	49	71145	70	14	45	11	59
TMR_00687	tmRNA links to Rfam database...	0.37	0.35	0.38	39	71529	73	4	59	10	72
TMR_00696	tmRNA links to Rfam database...	0.33	0.33	0.33	38	84962	95	12	66	17	76
TMR_00698	tmRNA links to Rfam database...	0.56	0.55	0.58	57	63092	44	7	34	3	47
TMR_00699	tmRNA links to Rfam database...	0.39	0.37	0.40	38	67066	61	7	50	4	64
TMR_00702	tmRNA links to Rfam database...	0.19	0.19	0.20	19	67065	80	17	60	3	81
TMR_00703	tmRNA links to Rfam database...	0.36	0.36	0.37	36	67430	67	12	50	5	63
TMR_00706	tmRNA links to Rfam database...	0.53	0.52	0.53	54	66328	52	6	42	4	49
TMR_00711	tmRNA links to Rfam database...	0.55	0.54	0.55	53	67800	50	13	30	7	45
TMR_00712	tmRNA links to Rfam database...	0.38	0.39	0.38	43	78492	73	22	49	2	66
TMR_00716	tmRNA links to Rfam database...	0.19	0.19	0.19	19	62737	79	15	64	0	81

^top

Performance of RNAwolf - scored lower in this pairwise comparison

1. Total counts & total scores for RNAwolf

Total Base Pair Counts
Total TP	26149
Total TN	83081604
Total FP	77289
Total FP CONTRA	11934
Total FP INCONS	52262
Total FP COMP	13093
Total FN	56667

Total Scores
MCC	0.302
Average MCC ± 95% Confidence Intervals	0.324 ± 0.012
Sensitivity	0.316
Positive Predictive Value	0.289
Nr of predictions	740

^top

2. Individual counts for RNAwolf [ download as .csv ]

RNA Chain	Rfam family	MCC	SENS	PPV	TP	TN	FP	FP CONTRA	FP INCONS	FP COMP	FN
ASE_00001	RNaseP_arch links to Rfam database...	0.76	0.73	0.80	55	34122	33	1	13	19	20
ASE_00002	RNaseP_arch links to Rfam database...	0.56	0.53	0.58	39	35444	45	2	26	17	34
ASE_00004	RNaseP_bact_a links to Rfam database...	0.51	0.51	0.51	49	47799	61	8	39	14	48
ASE_00005	RNaseP_bact_a links to Rfam database...	0.46	0.46	0.47	54	57854	68	12	50	6	63
ASE_00006	RNaseP_bact_a links to Rfam database...	0.32	0.33	0.30	31	47484	83	10	61	12	62
ASE_00007	RNaseP_bact_a links to Rfam database...	0.30	0.30	0.31	33	59577	81	11	64	6	77
ASE_00009	RNaseP_arch links to Rfam database...	0.39	0.39	0.40	26	26041	48	4	35	9	41
ASE_00012	RNaseP_bact_a links to Rfam database...	0.54	0.54	0.54	67	73797	68	5	51	12	56
ASE_00014	RNaseP_arch links to Rfam database...	0.36	0.38	0.35	40	54171	80	16	58	6	66
ASE_00017	RNaseP_nuc links to Rfam database...	0.11	0.13	0.10	8	50962	92	14	56	22	56
ASE_00018	RNaseP_bact_a links to Rfam database...	0.53	0.54	0.53	72	80465	72	4	60	8	62
ASE_00020	RNaseP_bact_a links to Rfam database...	0.63	0.62	0.64	78	73799	56	6	37	13	48
ASE_00021	RNaseP_bact_a links to Rfam database...	0.45	0.44	0.46	70	104045	94	7	74	13	90
ASE_00022	RNaseP_bact_b links to Rfam database...	0.45	0.45	0.44	56	82901	79	9	62	8	68
ASE_00023	RNaseP_bact_a links to Rfam database...	0.48	0.50	0.46	63	84117	87	12	63	12	64
ASE_00025	RNaseP_nuc links to Rfam database...	0.26	0.30	0.24	21	78517	111	23	45	43	50
ASE_00026	RNaseP_bact_a links to Rfam database...	0.41	0.42	0.41	46	59573	75	6	60	9	64
ASE_00028	RNaseP_bact_b links to Rfam database...	0.46	0.47	0.45	59	84536	90	9	62	19	67
ASE_00029	RNaseP_bact_a links to Rfam database...	0.27	0.29	0.26	35	82894	112	15	84	13	87
ASE_00030	RNaseP_bact_a links to Rfam database...	0.49	0.46	0.52	67	85361	72	6	57	9	78
ASE_00031	RNaseP_bact_a links to Rfam database...	0.46	0.46	0.46	58	86609	81	8	61	12	68
ASE_00032	RNaseP_bact_a links to Rfam database...	0.32	0.31	0.33	37	80087	93	2	74	17	81
ASE_00033	RNaseP_bact_a links to Rfam database...	0.11	0.12	0.11	14	64857	111	8	101	2	107
ASE_00035	RNaseP_bact_a links to Rfam database...	0.22	0.23	0.22	27	70375	102	22	76	4	91
ASE_00036	RNaseP_bact_a links to Rfam database...	0.42	0.42	0.43	55	75728	79	4	68	7	77
ASE_00037	RNaseP_bact_a links to Rfam database...	0.36	0.35	0.39	38	59242	67	8	52	7	72
ASE_00038	RNaseP_bact_a links to Rfam database...	0.41	0.41	0.41	41	53529	66	7	51	8	60
ASE_00040	RNaseP_bact_a links to Rfam database...	0.31	0.32	0.30	43	78860	110	16	84	10	90
ASE_00041	RNaseP_bact_a links to Rfam database...	0.37	0.36	0.39	39	57530	71	7	54	10	69
ASE_00042	RNaseP_bact_a links to Rfam database...	0.31	0.31	0.31	45	89957	109	9	89	11	100
ASE_00044	RNaseP_bact_a links to Rfam database...	0.48	0.48	0.48	50	54511	71	5	49	17	55
ASE_00046	RNaseP_bact_a links to Rfam database...	0.21	0.21	0.22	22	50301	81	6	74	1	81
ASE_00047	RNaseP_bact_a links to Rfam database...	0.12	0.12	0.12	15	74178	121	5	107	9	115
ASE_00052	RNaseP_bact_a links to Rfam database...	0.17	0.17	0.17	19	61315	94	14	77	3	93
ASE_00053	RNaseP_bact_a links to Rfam database...	0.44	0.44	0.44	58	79269	85	12	62	11	75
ASE_00056	-	0.41	0.40	0.43	29	30808	57	6	33	18	43
ASE_00057	RNaseP_bact_a links to Rfam database...	0.53	0.53	0.54	71	82083	73	6	55	12	63
ASE_00064	RNaseP_bact_a links to Rfam database...	0.19	0.19	0.19	17	45361	82	13	60	9	72
ASE_00066	RNaseP_bact_a links to Rfam database...	0.50	0.51	0.49	66	72254	74	7	63	4	64
ASE_00068	RNaseP_bact_a links to Rfam database...	0.38	0.38	0.38	32	37591	57	8	44	5	53
ASE_00069	RNaseP_bact_a links to Rfam database...	0.57	0.56	0.58	78	82893	67	8	49	10	62
ASE_00074	RNaseP_bact_a links to Rfam database...	0.36	0.36	0.37	43	67779	81	9	65	7	76
ASE_00075	RNaseP_bact_a links to Rfam database...	0.59	0.57	0.60	93	108656	77	7	55	15	69
ASE_00076	RNaseP_bact_a links to Rfam database...	0.43	0.43	0.44	51	68148	77	10	56	11	67
ASE_00077	RNaseP_bact_a links to Rfam database...	0.36	0.37	0.35	32	45059	70	15	44	11	54
ASE_00078	RNaseP_bact_a links to Rfam database...	0.28	0.29	0.27	24	42983	71	8	56	7	59
ASE_00079	RNaseP_bact_a links to Rfam database...	0.47	0.47	0.48	47	55513	64	7	44	13	53
ASE_00080	RNaseP_bact_a links to Rfam database...	0.36	0.37	0.36	45	71507	88	5	74	9	78
ASE_00081	RNaseP_bact_a links to Rfam database...	0.21	0.22	0.21	21	49668	87	9	72	6	76
ASE_00082	RNaseP_bact_a links to Rfam database...	0.44	0.46	0.43	53	70377	86	8	62	16	63
ASE_00083	RNaseP_bact_a links to Rfam database...	0.29	0.29	0.28	32	62368	94	11	70	13	78
ASE_00084	RNaseP_bact_a links to Rfam database...	0.59	0.61	0.57	60	53523	55	7	38	10	39
ASE_00087	RNaseP_bact_a links to Rfam database...	0.29	0.28	0.31	41	88276	102	8	85	9	103
ASE_00089	-	0.46	0.47	0.45	37	31293	54	3	42	9	42
ASE_00090	RNaseP_bact_a links to Rfam database...	0.32	0.33	0.31	33	55504	91	4	70	17	68
ASE_00092	RNaseP_bact_a links to Rfam database...	0.51	0.52	0.50	59	63428	75	11	48	16	54
ASE_00096	RNaseP_bact_a links to Rfam database...	0.62	0.64	0.60	74	63422	58	13	37	8	41
ASE_00099	RNaseP_bact_a links to Rfam database...	0.56	0.55	0.56	66	64503	67	3	48	16	54
ASE_00100	RNaseP_nuc links to Rfam database...	0.22	0.24	0.20	18	82127	121	13	57	51	58
ASE_00102	RNaseP_bact_a links to Rfam database...	0.52	0.51	0.54	85	117697	89	7	66	16	81
ASE_00104	RNaseP_bact_a links to Rfam database...	0.40	0.39	0.41	46	64148	80	2	65	13	73
ASE_00105	RNaseP_bact_a links to Rfam database...	0.57	0.57	0.57	63	64151	57	10	37	10	48
ASE_00107	RNaseP_bact_a links to Rfam database...	0.51	0.53	0.50	67	73020	74	9	57	8	60
ASE_00108	RNaseP_nuc links to Rfam database...	0.19	0.22	0.16	14	46885	92	14	58	20	49
ASE_00111	RNaseP_nuc links to Rfam database...	0.20	0.25	0.17	14	50002	85	25	45	15	43
ASE_00112	RNaseP_bact_a links to Rfam database...	0.55	0.56	0.53	65	75344	66	4	53	9	51
ASE_00115	RNaseP_bact_a links to Rfam database...	0.28	0.29	0.28	29	54512	85	6	68	11	72
ASE_00116	RNaseP_arch links to Rfam database...	0.05	0.06	0.05	4	31549	79	14	59	6	62
ASE_00118	RNaseP_bact_a links to Rfam database...	0.28	0.30	0.26	31	60607	93	9	79	5	71
ASE_00119	RNaseP_bact_a links to Rfam database...	0.52	0.53	0.50	57	62722	71	10	46	15	51
ASE_00120	RNaseP_arch links to Rfam database...	0.20	0.20	0.20	19	46877	79	15	60	4	75
ASE_00121	RNaseP_arch links to Rfam database...	0.15	0.15	0.14	14	45052	88	10	74	4	78
ASE_00122	RNaseP_bact_a links to Rfam database...	0.36	0.36	0.35	32	43274	62	12	47	3	56
ASE_00123	RNaseP_bact_a links to Rfam database...	0.46	0.48	0.45	41	38412	58	9	41	8	44
ASE_00125	RNaseP_bact_a links to Rfam database...	0.48	0.48	0.48	42	39252	53	12	34	7	46
ASE_00126	RNaseP_bact_a links to Rfam database...	0.43	0.44	0.42	36	40385	59	9	40	10	46
ASE_00128	RNaseP_bact_a links to Rfam database...	0.45	0.46	0.43	46	53195	70	6	54	10	54
ASE_00129	RNaseP_bact_a links to Rfam database...	0.34	0.35	0.33	39	62716	87	8	72	7	72
ASE_00131	RNaseP_bact_a links to Rfam database...	0.47	0.46	0.48	39	39258	54	10	33	11	46
ASE_00132	RNaseP_bact_a links to Rfam database...	0.42	0.43	0.42	41	50305	63	13	44	6	54
ASE_00134	RNaseP_bact_a links to Rfam database...	0.49	0.49	0.48	47	50305	59	8	43	8	48
ASE_00135	RNaseP_bact_a links to Rfam database...	0.45	0.46	0.45	50	63078	74	12	50	12	59
ASE_00136	RNaseP_bact_a links to Rfam database...	0.27	0.27	0.27	25	48112	84	4	64	16	67
ASE_00137	RNaseP_bact_a links to Rfam database...	0.47	0.49	0.45	48	48410	75	3	55	17	50
ASE_00138	RNaseP_bact_a links to Rfam database...	0.54	0.56	0.54	45	40386	55	6	33	16	36
ASE_00139	RNaseP_bact_a links to Rfam database...	0.56	0.55	0.57	57	54185	52	7	36	9	47
ASE_00140	RNaseP_bact_a links to Rfam database...	0.51	0.50	0.52	62	70757	67	7	50	10	63
ASE_00142	RNaseP_bact_a links to Rfam database...	0.28	0.28	0.27	34	67037	95	13	77	5	88
ASE_00145	RNaseP_arch links to Rfam database...	0.24	0.25	0.24	28	70006	101	8	83	10	83
ASE_00146	RNaseP_bact_a links to Rfam database...	0.42	0.43	0.42	53	70749	81	12	62	7	71
ASE_00148	RNaseP_arch links to Rfam database...	0.36	0.36	0.36	56	112419	106	14	86	6	98
ASE_00151	RNaseP_bact_a links to Rfam database...	0.62	0.61	0.63	60	51908	47	9	26	12	38
ASE_00153	RNaseP_nuc links to Rfam database...	0.33	0.38	0.29	28	57534	96	15	53	28	45
ASE_00154	RNaseP_arch links to Rfam database...	0.42	0.42	0.43	45	65236	73	8	52	13	62
ASE_00155	RNaseP_arch links to Rfam database...	0.41	0.42	0.41	59	93384	92	4	81	7	83
ASE_00163	RNaseP_bact_a links to Rfam database...	0.40	0.40	0.40	37	53208	82	0	56	26	56
ASE_00165	RNaseP_bact_a links to Rfam database...	0.17	0.18	0.17	18	52870	93	10	77	6	83
ASE_00168	RNaseP_nuc links to Rfam database...	0.08	0.09	0.07	6	60637	105	22	61	22	58
ASE_00169	RNaseP_bact_a links to Rfam database...	0.51	0.50	0.51	54	57185	70	5	47	18	53
ASE_00170	RNaseP_bact_a links to Rfam database...	0.35	0.37	0.34	34	48728	76	9	57	10	59
ASE_00171	RNaseP_bact_a links to Rfam database...	0.57	0.60	0.55	56	48414	56	8	38	10	38
ASE_00172	RNaseP_bact_a links to Rfam database...	0.39	0.41	0.37	43	58880	80	9	64	7	63
ASE_00174	RNaseP_bact_a links to Rfam database...	0.48	0.50	0.47	55	60957	77	11	52	14	54
ASE_00175	RNaseP_bact_a links to Rfam database...	0.55	0.56	0.54	60	59919	62	10	42	10	47
ASE_00176	RNaseP_bact_a links to Rfam database...	0.41	0.43	0.41	47	59915	80	7	62	11	63
ASE_00179	RNaseP_bact_a links to Rfam database...	0.26	0.27	0.25	23	44162	79	13	55	11	61
ASE_00180	RNaseP_bact_a links to Rfam database...	0.43	0.43	0.43	43	51259	71	7	51	13	57
ASE_00181	RNaseP_bact_a links to Rfam database...	0.39	0.41	0.37	43	57514	78	9	64	5	63
ASE_00182	RNaseP_bact_a links to Rfam database...	0.43	0.43	0.44	58	84123	86	5	69	12	78
ASE_00183	RNaseP_bact_a links to Rfam database...	0.45	0.44	0.46	50	61316	71	8	51	12	63
ASE_00184	RNaseP_bact_a links to Rfam database...	0.44	0.46	0.42	47	54504	69	11	53	5	55
ASE_00185	RNaseP_bact_a links to Rfam database...	0.49	0.49	0.49	63	73407	73	10	56	7	65
ASE_00186	RNaseP_bact_a links to Rfam database...	0.43	0.42	0.44	55	78877	87	9	62	16	77
ASE_00187	RNaseP_arch links to Rfam database...	0.28	0.29	0.28	33	68517	96	13	72	11	82
ASE_00189	RNaseP_bact_b links to Rfam database...	0.34	0.35	0.34	36	63083	78	14	57	7	66
ASE_00190	RNaseP_bact_b links to Rfam database...	0.56	0.54	0.57	49	45365	50	1	36	13	41
ASE_00192	RNaseP_bact_b links to Rfam database...	0.51	0.51	0.51	68	84533	73	9	56	8	65
ASE_00194	RNaseP_bact_b links to Rfam database...	0.41	0.41	0.42	49	73419	79	4	64	11	70
ASE_00195	-	0.41	0.42	0.39	56	86177	97	17	70	10	77
ASE_00196	RNaseP_arch links to Rfam database...	0.57	0.59	0.55	44	31546	50	4	32	14	31
ASE_00197	RNaseP_bact_a links to Rfam database...	0.31	0.32	0.31	46	89104	114	10	93	11	99
ASE_00198	RNaseP_bact_a links to Rfam database...	0.28	0.27	0.28	28	52551	76	7	64	5	74
ASE_00203	RNaseP_bact_a links to Rfam database...	0.54	0.55	0.52	53	46564	58	10	38	10	43
ASE_00204	RNaseP_bact_b links to Rfam database...	0.51	0.53	0.49	59	67775	70	12	50	8	53
ASE_00205	RNaseP_arch links to Rfam database...	0.17	0.19	0.16	17	45949	90	17	73	0	73
ASE_00209	RNaseP_arch links to Rfam database...	0.30	0.30	0.31	26	42988	63	8	49	6	62
ASE_00210	RNaseP_arch links to Rfam database...	0.62	0.63	0.61	41	27194	39	9	17	13	24
ASE_00212	RNaseP_bact_a links to Rfam database...	0.29	0.29	0.28	43	93810	117	10	98	9	105
ASE_00213	RNaseP_arch links to Rfam database...	0.68	0.65	0.70	43	27200	31	6	12	13	23
ASE_00214	RNaseP_bact_a links to Rfam database...	0.44	0.46	0.43	47	56171	76	2	60	14	56
ASE_00215	RNaseP_bact_a links to Rfam database...	0.28	0.28	0.29	28	48418	83	6	64	13	71
ASE_00216	RNaseP_bact_a links to Rfam database...	0.25	0.26	0.25	21	39255	67	8	56	3	61
ASE_00217	RNaseP_bact_a links to Rfam database...	0.34	0.33	0.35	30	40385	63	5	50	8	60
ASE_00221	RNaseP_bact_a links to Rfam database...	0.36	0.37	0.35	43	64496	87	11	70	6	74
ASE_00222	RNaseP_arch links to Rfam database...	0.30	0.32	0.29	50	111929	125	20	102	3	107
ASE_00227	RNaseP_bact_a links to Rfam database...	0.21	0.20	0.21	27	78875	107	6	95	6	106
ASE_00228	RNaseP_bact_a links to Rfam database...	0.36	0.40	0.32	34	46866	76	20	51	5	52
ASE_00229	RNaseP_bact_a links to Rfam database...	0.09	0.10	0.09	9	42384	101	6	87	8	78
ASE_00231	RNaseP_bact_a links to Rfam database...	0.56	0.58	0.53	56	47790	61	8	41	12	40
ASE_00232	RNaseP_bact_a links to Rfam database...	0.37	0.39	0.36	33	38411	70	4	55	11	51
ASE_00234	RNaseP_bact_a links to Rfam database...	0.54	0.54	0.55	70	75338	70	8	50	12	59
ASE_00237	RNaseP_nuc links to Rfam database...	0.00	0.00	0.00	0	45662	110	30	61	19	56
ASE_00238	RNaseP_bact_a links to Rfam database...	0.56	0.57	0.56	65	64144	64	10	42	12	49
ASE_00240	RNaseP_bact_a links to Rfam database...	0.31	0.31	0.32	29	46573	73	9	54	10	64
ASE_00241	RNaseP_bact_a links to Rfam database...	0.62	0.64	0.59	56	43861	48	6	33	9	31
ASE_00242	RNaseP_bact_a links to Rfam database...	0.42	0.41	0.44	46	60970	62	14	45	3	66
ASE_00246	RNaseP_nuc links to Rfam database...	0.07	0.07	0.06	5	48121	94	25	54	15	62
ASE_00247	RNaseP_nuc links to Rfam database...	0.10	0.13	0.08	8	54188	105	25	64	16	56
ASE_00248	RNaseP_bact_a links to Rfam database...	0.32	0.31	0.33	35	62376	75	7	63	5	79
ASE_00250	RNaseP_bact_a links to Rfam database...	0.37	0.36	0.38	47	78880	83	10	66	7	84
ASE_00252	RNaseP_bact_a links to Rfam database...	0.30	0.30	0.31	50	115281	120	9	100	11	118
ASE_00254	RNaseP_bact_a links to Rfam database...	0.36	0.39	0.34	32	36761	69	10	53	6	50
ASE_00255	RNaseP_bact_a links to Rfam database...	0.46	0.47	0.45	61	74555	83	9	66	8	69
ASE_00257	RNaseP_bact_a links to Rfam database...	0.56	0.57	0.56	55	50941	56	9	35	12	42
ASE_00259	RNaseP_bact_a links to Rfam database...	0.35	0.35	0.36	42	73037	85	9	65	11	79
ASE_00263	RNaseP_bact_a links to Rfam database...	0.15	0.16	0.15	19	70373	111	9	99	3	101
ASE_00264	RNaseP_nuc links to Rfam database...	0.43	0.44	0.43	44	49038	69	6	53	10	56
ASE_00267	RNaseP_bact_a links to Rfam database...	0.36	0.35	0.37	31	45067	62	8	44	10	57
ASE_00270	RNaseP_bact_a links to Rfam database...	0.51	0.50	0.52	64	72268	71	4	54	13	64
ASE_00274	RNaseP_bact_a links to Rfam database...	0.30	0.29	0.30	30	55512	78	13	56	9	73
ASE_00277	RNaseP_bact_a links to Rfam database...	0.28	0.30	0.26	27	48103	84	14	61	9	64
ASE_00279	RNaseP_bact_a links to Rfam database...	0.29	0.29	0.29	29	53202	80	4	66	10	72
ASE_00280	RNaseP_bact_a links to Rfam database...	0.20	0.20	0.20	20	51905	85	5	73	7	78
ASE_00281	RNaseP_bact_a links to Rfam database...	0.33	0.34	0.32	30	44458	73	11	52	10	58
ASE_00282	RNaseP_bact_a links to Rfam database...	0.23	0.24	0.24	30	77688	105	10	87	8	97
ASE_00283	RNaseP_bact_a links to Rfam database...	0.46	0.48	0.45	51	61662	74	12	51	11	56
ASE_00284	RNaseP_bact_a links to Rfam database...	0.08	0.08	0.08	9	58197	111	9	96	6	99
ASE_00285	RNaseP_bact_a links to Rfam database...	0.27	0.28	0.27	34	68878	102	9	85	8	88
ASE_00286	RNaseP_bact_a links to Rfam database...	0.57	0.54	0.61	50	46583	42	6	26	10	42
ASE_00287	RNaseP_bact_a links to Rfam database...	0.30	0.30	0.30	31	54842	81	6	67	8	72
ASE_00288	RNaseP_bact_a links to Rfam database...	0.27	0.27	0.28	25	45967	68	12	52	4	68
ASE_00289	RNaseP_bact_a links to Rfam database...	0.67	0.66	0.68	104	100873	60	6	42	12	53
ASE_00291	-	0.39	0.40	0.38	38	48415	73	7	56	10	56
ASE_00292	RNaseP_bact_a links to Rfam database...	0.38	0.38	0.39	52	81676	93	8	74	11	86
ASE_00294	RNaseP_bact_a links to Rfam database...	0.38	0.37	0.38	63	114317	107	9	92	6	108
ASE_00295	RNaseP_bact_a links to Rfam database...	0.49	0.49	0.50	64	73792	73	10	54	9	67
ASE_00296	RNaseP_bact_a links to Rfam database...	0.31	0.30	0.32	44	91669	101	7	86	8	101
ASE_00297	RNaseP_bact_a links to Rfam database...	0.41	0.42	0.40	41	52873	73	4	57	12	57
ASE_00298	RNaseP_bact_a links to Rfam database...	0.29	0.29	0.30	33	67418	86	8	69	9	80
ASE_00299	RNaseP_bact_a links to Rfam database...	0.45	0.47	0.43	47	49346	69	6	56	7	53
ASE_00313	RNaseP_nuc links to Rfam database...	0.11	0.11	0.11	10	62387	106	11	73	22	79
ASE_00316	RNaseP_nuc links to Rfam database...	0.30	0.34	0.27	33	107758	124	18	71	35	65
ASE_00318	RNaseP_bact_b links to Rfam database...	0.41	0.42	0.40	49	80077	79	13	61	5	69
ASE_00327	RNaseP_nuc links to Rfam database...	0.44	0.48	0.40	43	57184	75	21	43	11	46
ASE_00328	RNaseP_bact_b links to Rfam database...	0.51	0.49	0.53	55	72667	61	5	44	12	57
ASE_00330	RNaseP_nuc links to Rfam database...	0.40	0.42	0.38	38	56181	78	12	49	17	52
ASE_00332	RNaseP_bact_a links to Rfam database...	0.23	0.23	0.24	32	81674	118	5	99	14	106
ASE_00335	RNaseP_bact_b links to Rfam database...	0.58	0.57	0.58	66	75353	65	5	42	18	50
ASE_00337	RNaseP_nuc links to Rfam database...	0.45	0.44	0.47	31	39274	59	1	34	24	40
ASE_00338	RNaseP_nuc links to Rfam database...	0.35	0.37	0.34	36	66323	87	14	57	16	62
ASE_00339	RNaseP_bact_a links to Rfam database...	0.51	0.52	0.50	62	80077	77	3	58	16	57
ASE_00340	RNaseP_bact_a links to Rfam database...	0.14	0.15	0.14	13	45963	87	8	72	7	72
ASE_00342	RNaseP_bact_a links to Rfam database...	0.50	0.50	0.50	58	62365	70	9	49	12	57
ASE_00343	RNaseP_bact_a links to Rfam database...	0.51	0.50	0.53	56	83331	75	2	47	26	57
ASE_00346	RNaseP_arch links to Rfam database...	0.26	0.26	0.27	25	48112	83	9	59	15	72
ASE_00353	RNaseP_bact_a links to Rfam database...	0.19	0.21	0.19	22	57852	106	9	87	10	85
ASE_00359	RNaseP_arch links to Rfam database...	0.16	0.18	0.15	14	42682	87	15	67	5	66
ASE_00360	RNaseP_arch links to Rfam database...	0.25	0.28	0.23	18	29326	62	10	49	3	47
ASE_00361	RNaseP_bact_a links to Rfam database...	0.36	0.37	0.35	47	75333	94	11	75	8	80
ASE_00362	RNaseP_bact_a links to Rfam database...	0.43	0.44	0.42	40	48110	66	10	45	11	51
ASE_00363	RNaseP_bact_a links to Rfam database...	0.29	0.31	0.27	29	51254	81	12	65	4	65
ASE_00364	RNaseP_bact_a links to Rfam database...	0.38	0.39	0.38	41	54177	77	9	58	10	64
ASE_00366	RNaseP_bact_a links to Rfam database...	0.19	0.20	0.17	20	58538	98	14	81	3	78
ASE_00367	RNaseP_bact_a links to Rfam database...	0.26	0.27	0.25	23	42978	79	8	62	9	63
ASE_00369	RNaseP_bact_a links to Rfam database...	0.34	0.36	0.33	38	55831	88	3	73	12	69
ASE_00370	RNaseP_bact_a links to Rfam database...	0.29	0.30	0.28	25	41816	75	7	57	11	59
ASE_00372	RNaseP_bact_a links to Rfam database...	0.21	0.22	0.21	22	51897	88	11	73	4	78
ASE_00374	RNaseP_bact_a links to Rfam database...	0.48	0.48	0.48	42	44763	54	2	43	9	46
ASE_00375	RNaseP_bact_a links to Rfam database...	0.34	0.32	0.37	35	60284	67	9	50	8	75
ASE_00376	RNaseP_bact_a links to Rfam database...	0.45	0.46	0.44	48	56843	71	4	58	9	57
ASE_00377	RNaseP_bact_a links to Rfam database...	0.65	0.65	0.64	70	57521	52	8	31	13	37
ASE_00379	RNaseP_bact_a links to Rfam database...	0.25	0.26	0.25	23	45964	77	10	59	8	66
ASE_00380	RNaseP_bact_a links to Rfam database...	0.28	0.28	0.29	28	54848	82	7	63	12	71
ASE_00382	RNaseP_bact_a links to Rfam database...	0.36	0.37	0.35	31	41816	69	12	46	11	53
ASE_00383	RNaseP_bact_a links to Rfam database...	0.44	0.43	0.45	45	54514	70	4	52	14	60
ASE_00384	RNaseP_bact_a links to Rfam database...	0.27	0.28	0.27	26	48418	84	10	62	12	66
ASE_00385	RNaseP_bact_a links to Rfam database...	0.52	0.52	0.53	42	41825	54	7	31	16	39
ASE_00386	RNaseP_bact_a links to Rfam database...	0.39	0.40	0.38	38	50303	74	6	56	12	58
ASE_00387	RNaseP_bact_a links to Rfam database...	0.47	0.47	0.47	49	55841	66	8	47	11	55
ASE_00388	RNaseP_bact_a links to Rfam database...	0.29	0.30	0.28	27	45657	84	7	62	15	62
ASE_00390	RNaseP_bact_a links to Rfam database...	0.38	0.40	0.36	34	42100	71	9	52	10	51
ASE_00393	RNaseP_bact_a links to Rfam database...	0.27	0.28	0.27	26	47798	77	6	65	6	67
ASE_00394	RNaseP_bact_a links to Rfam database...	0.29	0.29	0.30	27	46881	73	6	57	10	66
ASE_00395	RNaseP_bact_a links to Rfam database...	0.54	0.56	0.52	47	41526	54	12	31	11	37
ASE_00396	RNaseP_bact_a links to Rfam database...	0.28	0.30	0.27	25	41522	78	11	58	9	58
ASE_00397	RNaseP_bact_a links to Rfam database...	0.43	0.43	0.42	45	54509	75	7	54	14	60
ASE_00398	RNaseP_bact_a links to Rfam database...	0.35	0.36	0.35	37	55839	79	6	63	10	67
ASE_00400	RNaseP_bact_a links to Rfam database...	0.63	0.64	0.62	68	57860	54	9	33	12	38
ASE_00401	RNaseP_bact_a links to Rfam database...	0.39	0.40	0.38	51	76893	91	12	72	7	75
ASE_00402	RNaseP_bact_a links to Rfam database...	0.44	0.45	0.44	38	42400	59	7	41	11	47
ASE_00403	RNaseP_bact_a links to Rfam database...	0.24	0.23	0.24	25	55841	94	8	71	15	82
ASE_00404	RNaseP_bact_a links to Rfam database...	0.25	0.28	0.23	24	42967	83	16	64	3	61
ASE_00406	RNaseP_bact_a links to Rfam database...	0.33	0.32	0.34	30	48740	71	5	53	13	64
ASE_00408	-	0.32	0.32	0.32	23	32312	59	6	44	9	48
ASE_00409	-	0.29	0.33	0.27	27	40941	76	9	64	3	56
ASE_00411	RNaseP_bact_a links to Rfam database...	0.39	0.40	0.39	36	49362	70	10	47	13	53
ASE_00412	RNaseP_bact_a links to Rfam database...	0.25	0.25	0.25	26	58206	86	11	68	7	79
ASE_00413	RNaseP_bact_a links to Rfam database...	0.60	0.62	0.59	50	44466	49	10	25	14	31
ASE_00414	RNaseP_bact_a links to Rfam database...	0.34	0.34	0.34	32	46267	75	6	55	14	63
ASE_00415	RNaseP_bact_a links to Rfam database...	0.47	0.48	0.46	49	54839	67	5	53	9	54
ASE_00416	RNaseP_bact_a links to Rfam database...	0.32	0.32	0.32	41	77291	98	8	81	9	86
ASE_00417	RNaseP_arch links to Rfam database...	0.42	0.44	0.40	44	54506	75	9	56	10	56
ASE_00418	RNaseP_arch links to Rfam database...	0.17	0.19	0.16	14	38696	80	6	65	9	61
ASE_00419	RNaseP_bact_a links to Rfam database...	0.51	0.52	0.49	54	54836	66	9	47	10	49
ASE_00422	RNaseP_bact_a links to Rfam database...	0.24	0.24	0.24	23	46875	85	1	72	12	71
ASE_00423	RNaseP_bact_a links to Rfam database...	0.36	0.38	0.34	41	56833	84	9	70	5	68
ASE_00426	RNaseP_bact_a links to Rfam database...	0.31	0.33	0.29	36	60951	91	10	78	3	72
ASE_00428	RNaseP_bact_a links to Rfam database...	0.29	0.30	0.29	37	76507	103	11	81	11	88
ASE_00429	-	0.36	0.38	0.35	25	28131	54	12	35	7	41
ASE_00430	RNaseP_bact_a links to Rfam database...	0.52	0.53	0.52	51	46873	56	1	46	9	46
ASE_00431	RNaseP_bact_a links to Rfam database...	0.54	0.54	0.54	51	46266	57	7	36	14	44
ASE_00434	RNaseP_bact_b links to Rfam database...	0.63	0.64	0.63	70	68154	63	4	37	22	40
ASE_00437	RNaseP_bact_a links to Rfam database...	0.30	0.30	0.31	41	79268	98	3	89	6	94
ASE_00438	RNaseP_bact_a links to Rfam database...	0.32	0.34	0.30	39	65935	97	16	76	5	77
ASE_00441	RNaseP_bact_a links to Rfam database...	0.45	0.46	0.45	51	64147	73	3	60	10	61
ASE_00447	RNaseP_bact_a links to Rfam database...	0.61	0.59	0.62	69	60267	47	9	33	5	47
ASE_00448	RNaseP_bact_a links to Rfam database...	0.45	0.43	0.48	48	64161	65	8	44	13	64
ASE_00451	RNaseP_bact_a links to Rfam database...	0.48	0.49	0.47	61	70746	77	7	62	8	64
CRW_00002	-	0.28	0.29	0.27	76	408775	248	40	169	39	188
CRW_00004	-	0.48	0.52	0.44	68	154135	122	26	61	35	63
CRW_00005	-	0.60	0.64	0.56	84	137925	109	18	48	43	48
CRW_00007	-	0.27	0.30	0.24	40	144827	136	30	94	12	93
CRW_00009	-	0.27	0.28	0.26	39	137927	133	8	101	24	99
CRW_00010	-	0.53	0.56	0.51	70	102695	88	16	50	22	56
CRW_00011	-	0.48	0.50	0.46	69	118190	102	17	65	20	69
CRW_00012	-	0.18	0.19	0.17	27	146996	153	11	119	23	114
CRW_00013	Intron_gpI links to Rfam database...	0.03	0.03	0.03	4	103598	147	24	114	9	111
CRW_00014	-	0.19	0.21	0.18	26	103596	132	24	94	14	97
CRW_00016	Intron_gpI links to Rfam database...	0.24	0.23	0.24	28	77305	101	10	78	13	92
CRW_00017	-	0.27	0.31	0.24	28	92120	129	15	72	42	63
CRW_00018	-	0.25	0.29	0.22	35	182553	173	35	87	51	86
CRW_00019	-	0.39	0.41	0.38	56	127617	118	20	72	26	81
CRW_00417	-	0.16	0.16	0.15	43	458123	262	39	198	25	219
CRW_00418	-	0.14	0.15	0.14	38	441051	257	48	193	16	222
CRW_00419	-	0.13	0.14	0.12	36	463875	271	46	209	16	229
CRW_00421	-	0.17	0.18	0.16	48	462897	276	52	206	18	218
CRW_00422	-	0.15	0.16	0.14	41	455242	274	39	213	22	222
CRW_00423	-	0.18	0.19	0.18	35	242358	187	21	142	24	154
CRW_00424	-	0.20	0.21	0.19	75	789009	339	43	269	27	288
CRW_00426	-	0.22	0.23	0.22	60	457173	236	41	172	23	205
CRW_00427	-	0.26	0.26	0.26	69	454312	242	35	165	42	192
CRW_00428	-	0.17	0.18	0.16	48	465797	277	52	198	27	212
CRW_00429	-	0.07	0.07	0.07	17	306675	249	37	207	5	216
CRW_00430	-	0.10	0.11	0.10	29	456197	279	45	219	15	237
CRW_00433	-	0.20	0.20	0.19	53	467752	243	36	187	20	210
CRW_00434	-	0.14	0.15	0.14	39	457167	272	43	197	32	224
CRW_00435	-	0.17	0.17	0.17	45	451453	253	34	193	26	220
CRW_00437	-	0.26	0.27	0.26	69	456226	230	32	163	35	191
CRW_00438	-	0.16	0.16	0.15	44	454297	253	44	196	13	224
CRW_00441	-	0.14	0.15	0.14	38	454303	253	49	191	13	224
CRW_00442	-	0.15	0.15	0.14	39	453356	254	41	192	21	222
CRW_00443	-	0.20	0.20	0.20	52	456224	251	42	172	37	208
CRW_00444	-	0.23	0.24	0.23	62	459095	240	39	165	36	201
CRW_00445	-	0.23	0.25	0.22	65	458114	258	46	178	34	200
CRW_00446	-	0.11	0.11	0.10	30	468710	276	47	209	20	235
CRW_00447	-	0.14	0.15	0.13	38	452387	274	38	213	23	222
CRW_00448	-	0.08	0.08	0.08	22	457185	260	47	192	21	239
CRW_00449	-	0.09	0.10	0.09	25	444821	265	45	205	15	235
CRW_00450	-	0.17	0.18	0.16	46	458120	263	37	200	26	216
CRW_00451	-	0.18	0.19	0.18	51	457155	266	47	193	26	213
CRW_00452	-	0.14	0.15	0.13	39	453337	275	42	210	23	223
CRW_00453	-	0.25	0.25	0.25	64	452419	227	33	160	34	197
CRW_00456	-	0.19	0.19	0.19	50	470672	235	38	175	22	215
CRW_00457	-	0.27	0.28	0.27	75	467746	248	26	181	41	189
CRW_00458	-	0.27	0.27	0.27	71	464866	208	41	152	15	193
CRW_00459	-	0.22	0.23	0.22	60	461968	248	35	178	35	203
CRW_00462	-	0.19	0.20	0.18	51	458126	254	29	197	28	210
CRW_00463	-	0.21	0.22	0.20	56	445761	243	47	176	20	198
CRW_00464	-	0.17	0.17	0.17	44	461979	238	40	178	20	220
CRW_00530	-	0.24	0.27	0.22	72	534761	278	73	189	16	196
CRW_00538	-	0.21	0.24	0.18	72	811777	358	86	240	32	228
CRW_00604	-	0.81	0.81	0.80	66	411696	242	2	14	226	15
CRW_00605	-	0.41	0.43	0.40	30	183846	165	10	35	120	40
CRW_00606	-	0.72	0.73	0.72	67	559060	311	5	21	285	25
CRW_00607	-	0.45	0.45	0.44	35	536050	325	12	33	280	42
CRW_00608	-	0.67	0.67	0.66	53	35698	45	3	24	18	26
CRW_00610	Intron_gpI links to Rfam database...	0.52	0.52	0.52	42	36234	53	4	35	14	39
CRW_00611	-	0.41	0.43	0.40	32	31294	61	7	42	12	43
CRW_00612	-	0.44	0.47	0.42	44	270374	224	12	50	162	49
CRW_00613	Intron_gpI links to Rfam database...	0.60	0.62	0.59	48	34898	50	1	33	16	30
CRW_00614	Intron_gpI links to Rfam database...	0.09	0.12	0.07	7	121673	167	34	57	76	50
CRW_00615	-	0.44	0.55	0.36	45	553753	334	38	42	254	37
CRW_00617	-	0.07	0.09	0.05	6	426305	316	43	72	201	58
CRW_00618	Intron_gpI links to Rfam database...	0.01	0.02	0.01	1	56208	107	13	58	36	60
CRW_00619	Intron_gpI links to Rfam database...	0.27	0.32	0.24	23	164928	154	28	46	80	50
CRW_00620	Intron_gpI links to Rfam database...	0.31	0.33	0.28	21	150901	165	8	45	112	42
CRW_00621	Intron_gpI links to Rfam database...	0.26	0.30	0.23	21	153090	163	20	50	93	50
CRW_00623	Intron_gpI links to Rfam database...	0.11	0.13	0.10	11	129683	155	28	73	54	72
CRW_00626	-	0.23	0.27	0.21	28	100889	131	21	87	23	76
CRW_00629	-	0.21	0.21	0.20	26	91248	110	22	82	6	96
CRW_00632	-	0.43	0.44	0.43	56	82898	90	9	65	16	72
CRW_00633	Intron_gpI links to Rfam database...	0.29	0.29	0.30	31	63442	76	12	61	3	75
CRW_00634	Intron_gpI links to Rfam database...	0.19	0.22	0.17	21	64493	110	25	81	4	73
CRW_00635	-	0.10	0.10	0.10	14	109142	127	12	110	5	123
CRW_00636	-	0.32	0.34	0.31	48	114803	121	14	95	12	95
CRW_00637	-	0.23	0.24	0.22	38	133733	137	20	112	5	120
CRW_00639	-	0.16	0.18	0.15	25	126587	151	29	115	7	113
CRW_00641	-	0.53	0.55	0.51	42	39820	55	6	35	14	34
CRW_00642	-	0.51	0.55	0.47	36	47201	69	14	27	28	29
CRW_00643	-	0.22	0.26	0.19	32	123086	152	38	100	14	90
CRW_00645	-	0.28	0.31	0.26	21	35430	70	11	49	10	46
CRW_00646	-	0.21	0.23	0.19	15	34899	74	11	55	8	49
CRW_00648	-	0.33	0.34	0.32	50	137920	132	23	82	27	98
CRW_00649	-	0.26	0.27	0.25	33	204350	183	20	77	86	91
CRW_00650	-	0.40	0.41	0.38	58	112899	107	12	81	14	84
CRW_00651	-	0.53	0.57	0.49	69	99988	93	19	52	22	52
CRW_00652	-	0.29	0.32	0.27	41	132201	140	15	98	27	89
CRW_00653	-	0.47	0.48	0.46	64	94692	87	11	63	13	70
CRW_00654	-	0.48	0.49	0.47	61	78080	80	11	58	11	63
CRW_00655	-	0.21	0.22	0.20	27	89117	118	9	100	9	97
CRW_00656	-	0.43	0.44	0.42	57	90389	94	12	67	15	72
CRW_00657	-	0.14	0.15	0.13	20	105874	141	14	122	5	116
CRW_00658	-	0.22	0.24	0.20	24	74572	115	12	83	20	78
CRW_00659	-	0.31	0.34	0.28	21	32309	64	13	42	9	40
CRW_00660	-	0.24	0.25	0.23	15	22090	56	7	43	6	45
CRW_00661	-	0.00	0.00	0.00	0	24243	72	14	53	5	51
CRW_00662	-	0.38	0.38	0.38	25	28615	61	4	36	21	40
CRW_00663	-	0.09	0.10	0.09	6	26039	71	9	52	10	55
CRW_00664	-	0.05	0.06	0.05	5	53527	99	22	74	3	73
CRW_00665	-	0.05	0.06	0.04	3	23582	73	12	56	5	45
CRW_00666	-	0.15	0.16	0.15	20	96004	127	16	101	10	106
CRW_00668	-	0.20	0.23	0.18	34	163694	166	28	122	16	116
CRW_00669	-	0.20	0.22	0.18	26	97316	132	24	95	13	93
CRW_00670	Intron_gpI links to Rfam database...	0.35	0.35	0.35	42	70006	81	12	65	4	78
CRW_00671	Intron_gpI links to Rfam database...	0.13	0.13	0.13	15	62723	100	11	86	3	102
CRW_00672	Intron_gpI links to Rfam database...	0.06	0.06	0.06	7	72276	114	17	90	7	104
CRW_00673	-	0.33	0.38	0.29	40	99992	128	28	68	32	65
CRW_00674	Intron_gpI links to Rfam database...	0.28	0.28	0.28	35	83310	106	12	79	15	89
CRW_00676	Intron_gpI links to Rfam database...	0.16	0.17	0.16	19	93407	113	22	80	11	96
CRW_00677	-	0.41	0.44	0.38	46	71888	88	17	59	12	59
CRW_00678	-	0.16	0.18	0.14	22	666279	384	32	102	250	99
CRW_00679	-	0.15	0.17	0.13	18	76502	123	23	93	7	89
CRW_00680	-	0.25	0.28	0.23	34	516487	293	22	93	178	88
CRW_00681	-	0.14	0.17	0.12	19	112896	150	35	100	15	93
CRW_00683	-	0.10	0.13	0.09	17	460126	313	48	129	136	118
CRW_00684	-	0.10	0.13	0.09	17	611976	357	48	130	179	118
CRW_00685	-	0.30	0.31	0.28	33	156964	148	16	67	65	73
CRW_00686	-	0.53	0.55	0.51	69	95132	83	13	52	18	56
CRW_00687	-	0.58	0.62	0.55	41	28605	38	15	19	4	25
CRW_00688	-	0.43	0.44	0.42	25	21885	42	9	26	7	32
CRW_00689	-	0.11	0.12	0.10	9	33582	79	8	71	0	68
CRW_00690	-	0.32	0.33	0.32	23	33339	55	10	39	6	46
CRW_00691	-	0.20	0.22	0.19	15	27182	68	14	50	4	52
CRW_00692	Intron_gpI links to Rfam database...	0.18	0.19	0.18	17	68539	100	16	63	21	73
CRW_00693	-	0.66	0.68	0.64	83	89123	62	18	29	15	39
CRW_00694	-	0.58	0.60	0.57	73	85776	64	16	40	8	49
CRW_00699	-	0.21	0.22	0.20	28	91668	119	19	91	9	98
CRW_00700	-	0.27	0.27	0.26	40	180747	150	8	106	36	107
CRW_00702	-	0.30	0.35	0.25	26	357333	263	32	44	187	49
CRW_00703	-	0.00	0.00	0.00	0	40387	94	12	71	11	66
CRW_00704	-	0.33	0.36	0.31	34	386650	255	25	51	179	60
CRW_00706	-	0.43	0.46	0.40	27	695542	380	10	31	339	32
CRW_00713	-	0.38	0.41	0.35	41	731327	351	24	53	274	60
CRW_00714	-	0.29	0.32	0.26	34	186223	168	21	77	70	73
CRW_00715	-	0.40	0.40	0.39	42	69270	80	3	63	14	62
CRW_00716	-	0.11	0.15	0.09	13	193610	201	30	100	71	76
CRW_00717	-	0.22	0.24	0.20	36	153558	154	28	113	13	112
CRW_00718	-	0.26	0.26	0.26	49	189847	150	17	123	10	142
CRW_00719	-	0.23	0.25	0.21	23	230070	211	27	61	123	68
CRW_00720	-	0.16	0.20	0.13	18	208198	205	36	83	86	73
CRW_00721	-	0.26	0.31	0.22	21	58559	91	29	44	18	47
CRW_00764	-	0.05	0.06	0.05	11	252903	212	39	163	10	185
CRW_00765	-	0.13	0.14	0.12	37	452376	272	55	208	9	220
CRW_00766	-	0.14	0.15	0.13	35	440129	259	41	186	32	205
CRW_00768	-	0.30	0.32	0.29	83	471617	239	48	158	33	176
CRW_00769	-	0.21	0.23	0.20	58	451429	261	51	187	23	194
CRW_00773	-	0.32	0.33	0.31	85	451453	218	45	142	31	174
CRW_00774	-	0.15	0.16	0.14	42	488276	276	32	216	28	221
CRW_00775	-	0.07	0.07	0.06	15	314582	231	53	171	7	197
CRW_00777	-	0.09	0.10	0.08	31	719031	376	64	274	38	273
CRW_00780	-	0.19	0.20	0.18	50	475527	242	42	181	19	205
CRW_00783	-	0.13	0.14	0.12	35	453340	266	49	204	13	224
CRW_00784	-	0.17	0.18	0.16	48	456191	277	37	214	26	214
CRW_00785	-	0.21	0.22	0.21	55	452412	242	43	166	33	198
CRW_00787	-	0.18	0.19	0.18	59	646617	305	35	242	28	247
CRW_00794	-	0.13	0.15	0.12	36	434484	283	53	205	25	210
CRW_00796	-	0.05	0.06	0.05	14	384732	272	52	205	15	221
CRW_00797	-	0.13	0.14	0.12	47	692868	356	57	281	18	295
CRW_00801	-	0.18	0.19	0.17	48	438233	249	59	176	14	201
CRW_00802	-	0.12	0.13	0.11	33	460031	275	47	209	19	220
CRW_00813	-	0.11	0.15	0.08	20	530728	326	95	122	109	113
CRW_00815	-	0.43	0.45	0.41	71	159721	123	28	75	20	87
CRW_00816	-	0.21	0.23	0.19	30	143756	163	32	98	33	99
CRW_00820	-	0.32	0.32	0.32	46	136359	125	6	92	27	99
CRW_01186	-	0.19	0.19	0.18	75	836163	348	55	278	15	311
CRW_01250	-	0.22	0.22	0.22	85	781486	328	41	263	24	293
CRW_01266	-	0.19	0.20	0.18	76	818139	366	54	291	21	305
CRW_01271	-	0.17	0.17	0.17	65	827149	364	36	291	37	316
CRW_01344	-	0.16	0.16	0.16	59	791531	333	54	267	12	307
PDB_00005	Tymo_tRNA-like links to Rfam database...	0.42	0.36	0.50	5	936	6	0	5	1	9
PDB_00018	-	0.18	0.15	0.25	3	1023	9	2	7	0	17
PDB_00020	-	0.39	0.35	0.47	7	765	8	0	8	0	13
PDB_00041	-	0.61	0.50	0.75	6	622	2	0	2	0	6
PDB_00053	-	0.73	0.55	1.00	6	429	0	0	0	0	5
PDB_00056	-	-0.02	0.00	0.00	0	615	15	0	15	0	16
PDB_00072	-	0.34	0.36	0.33	76	148009	158	26	129	3	134
PDB_00078	-	0.31	0.30	0.33	34	49666	74	4	66	4	81
PDB_00079	-	0.39	0.41	0.36	58	121612	112	21	80	11	84
PDB_00123	-	0.31	0.33	0.30	12	4146	28	4	24	0	24
PDB_00124	-	-0.02	0.00	0.00	0	485	11	2	9	0	10
PDB_00128	-	0.84	0.71	1.00	10	486	0	0	0	0	4
PDB_00134	-	0.72	0.63	0.83	5	372	3	0	1	2	3
PDB_00138	-	-0.02	0.00	0.00	0	371	7	0	7	0	8
PDB_00209	-	0.74	0.55	1.00	6	555	0	0	0	0	5
PDB_00243	-	0.54	0.42	0.71	5	623	2	0	2	0	7
PDB_00278	-	0.30	0.29	0.30	21	24907	50	3	45	2	51
PDB_00352	-	0.67	0.58	0.79	11	1211	3	0	3	0	8
PDB_00370	-	0.34	0.48	0.25	12	15177	42	23	13	6	13
PDB_00403	-	0.45	0.46	0.45	70	124593	106	13	74	19	83
PDB_00409	-	0.29	0.34	0.24	84	688207	347	81	179	87	161
PDB_00423	-	0.54	0.51	0.57	38	26729	33	0	29	4	36
PDB_00447	-	0.22	0.20	0.25	9	7104	27	2	25	0	35
PDB_00571	tRNA links to Rfam database...	0.89	0.84	0.95	21	3299	2	1	0	1	4
PDB_00701	-	0.14	0.15	0.14	16	45337	99	9	89	1	93
PDB_00713	-	0.28	0.24	0.33	5	2001	11	0	10	1	16
PDB_00716	HDV_ribozyme links to Rfam database...	0.68	0.57	0.81	13	2685	3	0	3	0	10
PDB_00747	-	0.47	0.46	0.49	37	24455	42	6	33	3	43
PDB_00804	-	0.23	0.24	0.22	12	15345	53	6	37	10	38
PDB_00805	-	0.34	0.36	0.33	108	467696	243	40	184	19	194
PDB_00827	Intron_gpI links to Rfam database...	0.58	0.58	0.57	47	26946	37	6	29	2	34
PDB_00828	Purine links to Rfam database...	0.85	0.81	0.88	22	2460	3	1	2	0	5
PDB_00829	Purine links to Rfam database...	0.78	0.75	0.82	18	2256	4	1	3	0	6
PDB_00842	-	0.72	0.63	0.83	5	372	1	0	1	0	3
PDB_00851	-	0.34	0.34	0.35	14	4713	26	0	26	0	27
PDB_00857	-	0.57	0.60	0.56	9	1065	7	0	7	0	6
PDB_00874	-	-0.02	0.00	0.00	0	928	18	0	18	0	20
PDB_00886	-	-0.01	0.00	0.00	0	4143	43	4	39	0	40
PDB_00917	-	0.35	0.34	0.36	32	35157	63	6	50	7	63
PDB_00918	-	-0.02	0.00	0.00	0	317	8	0	8	0	7
PDB_00919	RNaseP_bact_a links to Rfam database...	0.48	0.46	0.51	47	44161	51	5	40	6	56
PDB_01009	tRNA links to Rfam database...	0.45	0.52	0.39	11	2457	18	6	11	1	10
PDB_01020	Purine links to Rfam database...	0.84	0.83	0.86	19	2256	5	1	2	2	4
PDB_01040	-	0.24	0.25	0.25	5	1108	15	1	14	0	15
PDB_01059	-	-0.03	0.00	0.00	0	226	5	1	4	0	7
PDB_01070	-	0.00	0.00	0.00	0	12665	55	8	47	0	54
PDB_01073	SAM links to Rfam database...	0.17	0.18	0.17	6	4336	29	3	26	0	28
PDB_01092	glmS links to Rfam database...	0.43	0.38	0.49	20	10112	23	2	19	2	32
PDB_01129	-	0.19	0.20	0.18	14	35432	70	19	46	5	57
PDB_01157	-	0.22	0.22	0.22	22	49985	82	11	68	3	76
PDB_01166	-	0.28	0.27	0.28	57	181905	149	13	131	5	155
PDB_01194	-	0.61	0.53	0.73	8	485	3	0	3	0	7
PDB_01201	-	0.75	0.68	0.83	15	1110	3	0	3	0	7
PDB_01203	-	-0.01	0.00	0.00	0	1165	11	0	11	0	19
PDB_01250	-	0.45	0.44	0.46	18	12051	21	11	10	0	23
PDB_01260	-	-0.01	0.00	0.00	0	1809	21	0	21	0	25
PDB_01261	-	0.52	0.50	0.54	168	467715	157	13	132	12	168
PDB_01281	-	-0.04	0.00	0.00	0	365	13	0	13	0	14
PDB_01299	-	0.65	0.53	0.80	8	893	2	0	2	0	7
PDB_01309	-	0.26	0.31	0.22	12	9126	42	14	28	0	27
RFA_00597	Telomerase-vert links to Rfam database...	0.41	0.44	0.39	48	97780	99	18	57	24	61
RFA_00598	Telomerase-vert links to Rfam database...	0.18	0.20	0.17	20	84546	111	30	70	11	81
RFA_00599	Telomerase-vert links to Rfam database...	0.31	0.34	0.28	38	101339	111	33	65	13	73
RFA_00600	Telomerase-vert links to Rfam database...	0.06	0.08	0.05	8	120145	162	45	97	20	92
RFA_00601	Telomerase-vert links to Rfam database...	0.37	0.42	0.33	48	99088	112	28	71	13	66
RFA_00602	Telomerase-vert links to Rfam database...	0.32	0.35	0.30	41	101337	128	16	81	31	75
RFA_00632	HDV_ribozyme links to Rfam database...	0.25	0.25	0.27	7	4069	22	1	18	3	21
RFA_00636	HDV_ribozyme links to Rfam database...	0.40	0.39	0.41	11	3978	19	1	15	3	17
RFA_00767	Corona_pk3 links to Rfam database...	0.48	0.44	0.53	8	1876	8	1	6	1	10
RFA_00768	Corona_pk3 links to Rfam database...	0.50	0.44	0.57	8	1877	8	1	5	2	10
RFA_00769	Corona_pk3 links to Rfam database...	0.41	0.44	0.38	8	1932	13	3	10	0	10
RFA_00770	Corona_pk3 links to Rfam database...	0.51	0.50	0.53	9	1999	12	2	6	4	9
RFA_00773	Corona_pk3 links to Rfam database...	0.42	0.39	0.47	7	1938	12	1	7	4	11
RFA_00779	Corona_pk3 links to Rfam database...	0.26	0.28	0.26	5	1934	14	6	8	0	13
RFA_00808	RydC links to Rfam database...	0.68	0.56	0.82	9	2005	2	2	0	0	7
RFA_00809	RydC links to Rfam database...	0.47	0.38	0.60	6	2135	6	0	4	2	10
TMR_00007	tmRNA links to Rfam database...	0.35	0.36	0.34	39	61661	88	8	68	12	69
TMR_00008	tmRNA links to Rfam database...	0.36	0.38	0.34	40	65947	90	18	61	11	66
TMR_00010	tmRNA links to Rfam database...	0.21	0.23	0.19	22	57857	94	13	78	3	74
TMR_00012	tmRNA links to Rfam database...	0.32	0.37	0.28	30	64513	88	25	52	11	51
TMR_00014	tmRNA links to Rfam database...	0.55	0.56	0.54	62	68520	68	9	44	15	48
TMR_00017	tmRNA links to Rfam database...	0.27	0.26	0.27	27	67061	85	12	61	12	75
TMR_00018	tmRNA links to Rfam database...	0.34	0.37	0.32	34	64515	80	23	48	9	58
TMR_00028	tmRNA links to Rfam database...	0.33	0.36	0.31	35	62721	87	19	60	8	62
TMR_00030	tmRNA links to Rfam database...	0.20	0.20	0.20	22	75743	99	16	74	9	89
TMR_00034	tmRNA links to Rfam database...	0.58	0.60	0.56	66	59913	62	9	43	10	44
TMR_00035	tmRNA links to Rfam database...	0.13	0.15	0.12	15	67772	115	28	81	6	83
TMR_00036	tmRNA links to Rfam database...	0.19	0.20	0.18	20	90411	122	13	81	28	81
TMR_00038	tmRNA links to Rfam database...	0.48	0.51	0.46	56	71130	78	15	52	11	54
TMR_00042	tmRNA links to Rfam database...	0.24	0.24	0.24	24	62737	83	11	63	9	74
TMR_00046	tmRNA links to Rfam database...	0.38	0.42	0.35	40	62722	90	15	58	17	56
TMR_00047	tmRNA links to Rfam database...	0.17	0.21	0.15	12	48434	93	17	53	23	45
TMR_00048	tmRNA links to Rfam database...	0.51	0.55	0.47	52	64870	70	16	42	12	43
TMR_00049	tmRNA links to Rfam database...	0.21	0.22	0.20	19	63093	90	17	61	12	68
TMR_00051	tmRNA links to Rfam database...	0.22	0.24	0.21	23	65593	93	14	73	6	71
TMR_00055	tmRNA links to Rfam database...	0.18	0.18	0.18	21	78884	105	14	84	7	93
TMR_00057	tmRNA links to Rfam database...	0.12	0.14	0.10	11	73814	114	24	71	19	68
TMR_00061	tmRNA links to Rfam database...	0.11	0.12	0.11	12	59575	104	16	82	6	87
TMR_00062	tmRNA links to Rfam database...	0.19	0.20	0.19	21	78493	106	15	77	14	83
TMR_00064	tmRNA links to Rfam database...	0.08	0.09	0.07	9	76906	119	27	86	6	94
TMR_00065	tmRNA links to Rfam database...	0.18	0.20	0.16	21	76506	113	28	81	4	85
TMR_00067	tmRNA links to Rfam database...	0.32	0.34	0.30	39	82084	111	16	76	19	75
TMR_00073	tmRNA links to Rfam database...	0.30	0.29	0.30	34	65591	82	16	62	4	83
TMR_00076	tmRNA links to Rfam database...	0.32	0.34	0.31	34	70767	86	17	58	11	66
TMR_00080	tmRNA links to Rfam database...	0.19	0.22	0.17	21	70379	108	32	68	8	75
TMR_00081	tmRNA links to Rfam database...	0.39	0.42	0.37	45	67039	82	21	56	5	61
TMR_00082	tmRNA links to Rfam database...	0.30	0.33	0.28	32	67782	91	23	59	9	64
TMR_00083	tmRNA links to Rfam database...	0.65	0.68	0.62	71	68151	60	12	31	17	34
TMR_00092	tmRNA links to Rfam database...	0.51	0.56	0.47	57	67407	78	19	45	14	44
TMR_00093	tmRNA links to Rfam database...	0.32	0.35	0.30	36	64141	87	19	65	3	66
TMR_00096	tmRNA links to Rfam database...	0.30	0.31	0.28	31	64871	89	27	51	11	69
TMR_00101	tmRNA links to Rfam database...	0.10	0.10	0.09	11	64143	112	17	90	5	96
TMR_00102	tmRNA links to Rfam database...	0.17	0.19	0.16	19	64143	106	18	81	7	82
TMR_00103	tmRNA links to Rfam database...	0.54	0.56	0.51	61	64142	63	18	40	5	47
TMR_00104	-	0.06	0.07	0.05	5	66692	113	26	72	15	65
TMR_00106	tmRNA links to Rfam database...	0.30	0.33	0.27	39	89957	111	32	72	7	81
TMR_00109	tmRNA links to Rfam database...	0.43	0.44	0.43	54	88283	92	18	55	19	68
TMR_00111	tmRNA links to Rfam database...	0.58	0.60	0.56	73	90394	80	13	45	22	49
TMR_00116	tmRNA links to Rfam database...	0.47	0.49	0.46	51	64868	74	9	52	13	53
TMR_00117	tmRNA links to Rfam database...	0.58	0.58	0.58	69	80080	66	13	38	15	49
TMR_00118	tmRNA links to Rfam database...	0.24	0.25	0.24	30	81279	104	12	85	7	90
TMR_00119	tmRNA links to Rfam database...	0.15	0.16	0.14	17	71891	108	20	82	6	87
TMR_00123	tmRNA links to Rfam database...	0.21	0.23	0.21	23	66318	95	16	73	6	78
TMR_00124	tmRNA links to Rfam database...	0.49	0.54	0.45	53	70383	83	16	48	19	45
TMR_00125	tmRNA links to Rfam database...	0.19	0.19	0.18	19	64157	90	19	66	5	80
TMR_00127	tmRNA links to Rfam database...	0.22	0.23	0.21	22	62729	95	15	69	11	75
TMR_00128	tmRNA links to Rfam database...	0.23	0.26	0.21	25	60957	101	20	73	8	71
TMR_00131	tmRNA links to Rfam database...	0.23	0.24	0.22	24	64871	94	23	62	9	75
TMR_00135	tmRNA links to Rfam database...	0.19	0.21	0.18	21	62717	101	24	73	4	78
TMR_00136	tmRNA links to Rfam database...	0.11	0.12	0.10	12	74574	119	23	82	14	89
TMR_00137	tmRNA links to Rfam database...	0.30	0.34	0.27	30	60965	85	25	55	5	59
TMR_00139	tmRNA links to Rfam database...	0.22	0.24	0.20	22	62017	101	23	66	12	69
TMR_00140	tmRNA links to Rfam database...	0.12	0.14	0.11	14	73790	122	19	97	6	86
TMR_00142	tmRNA links to Rfam database...	0.30	0.33	0.28	34	70753	96	25	64	7	68
TMR_00143	tmRNA links to Rfam database...	0.38	0.40	0.36	41	64506	79	17	56	6	62
TMR_00144	tmRNA links to Rfam database...	0.24	0.25	0.22	26	74189	95	17	73	5	77
TMR_00146	tmRNA links to Rfam database...	0.49	0.50	0.49	21	32088	61	12	10	39	21
TMR_00150	tmRNA links to Rfam database...	0.54	0.62	0.46	26	43015	75	12	18	45	16
TMR_00152	tmRNA links to Rfam database...	0.25	0.26	0.24	30	81280	102	19	77	6	85
TMR_00155	tmRNA links to Rfam database...	0.37	0.38	0.36	39	61668	82	13	56	13	65
TMR_00156	tmRNA links to Rfam database...	0.11	0.12	0.10	12	60263	109	15	88	6	85
TMR_00158	tmRNA links to Rfam database...	0.35	0.39	0.32	39	60603	91	18	66	7	60
TMR_00159	tmRNA links to Rfam database...	0.39	0.41	0.37	38	62025	77	16	49	12	54
TMR_00160	tmRNA links to Rfam database...	0.20	0.20	0.19	19	64522	87	16	63	8	76
TMR_00164	tmRNA links to Rfam database...	0.19	0.20	0.19	21	66683	100	13	78	9	85
TMR_00165	tmRNA links to Rfam database...	0.30	0.32	0.29	31	61670	83	21	54	8	66
TMR_00166	tmRNA links to Rfam database...	0.28	0.29	0.27	29	61668	89	12	67	10	72
TMR_00168	tmRNA links to Rfam database...	0.66	0.66	0.66	75	60962	52	3	35	14	39
TMR_00173	tmRNA links to Rfam database...	0.16	0.19	0.14	8	42138	90	11	38	41	34
TMR_00179	tmRNA links to Rfam database...	0.32	0.35	0.31	34	67050	93	11	66	16	64
TMR_00180	tmRNA links to Rfam database...	0.54	0.56	0.52	55	67055	74	14	37	23	44
TMR_00182	tmRNA links to Rfam database...	0.05	0.06	0.05	6	66318	115	15	91	9	96
TMR_00183	tmRNA links to Rfam database...	0.17	0.17	0.16	18	63079	95	15	78	2	85
TMR_00184	tmRNA links to Rfam database...	0.25	0.26	0.24	27	63078	91	16	69	6	75
TMR_00193	tmRNA links to Rfam database...	0.30	0.33	0.28	26	59247	86	21	46	19	54
TMR_00194	tmRNA links to Rfam database...	0.39	0.41	0.37	38	62732	83	18	47	18	55
TMR_00196	tmRNA links to Rfam database...	0.28	0.30	0.27	29	60968	82	15	63	4	68
TMR_00199	tmRNA links to Rfam database...	0.28	0.30	0.26	28	62726	86	24	57	5	64
TMR_00200	-	0.29	0.31	0.28	23	41533	71	15	45	11	52
TMR_00204	tmRNA links to Rfam database...	0.35	0.37	0.34	36	60271	82	20	51	11	61
TMR_00207	tmRNA links to Rfam database...	0.26	0.27	0.25	28	72276	92	17	69	6	75
TMR_00223	tmRNA links to Rfam database...	0.15	0.17	0.13	16	64141	109	23	81	5	79
TMR_00224	tmRNA links to Rfam database...	0.15	0.17	0.14	17	64856	111	25	82	4	84
TMR_00226	tmRNA links to Rfam database...	0.53	0.55	0.52	58	69639	65	13	41	11	47
TMR_00227	tmRNA links to Rfam database...	0.27	0.30	0.25	30	70006	101	19	70	12	71
TMR_00228	tmRNA links to Rfam database...	0.20	0.22	0.18	24	88279	112	33	74	5	84
TMR_00234	tmRNA links to Rfam database...	0.33	0.34	0.32	35	58886	86	13	62	11	67
TMR_00238	tmRNA links to Rfam database...	0.14	0.15	0.13	15	84549	114	27	75	12	86
TMR_00239	tmRNA links to Rfam database...	0.41	0.43	0.40	41	61673	76	12	50	14	55
TMR_00240	tmRNA links to Rfam database...	0.32	0.38	0.27	32	63073	92	29	56	7	53
TMR_00246	-	0.12	0.15	0.10	5	78161	127	10	34	83	29
TMR_00248	tmRNA links to Rfam database...	0.37	0.42	0.32	16	54235	99	9	25	65	22
TMR_00257	tmRNA links to Rfam database...	0.26	0.29	0.24	28	67045	100	17	71	12	70
TMR_00259	tmRNA links to Rfam database...	0.23	0.24	0.22	25	67781	96	13	77	6	78
TMR_00261	tmRNA links to Rfam database...	0.23	0.25	0.21	25	66677	96	20	73	3	76
TMR_00262	tmRNA links to Rfam database...	0.32	0.36	0.30	37	74181	94	21	66	7	67
TMR_00271	tmRNA links to Rfam database...	0.19	0.21	0.18	19	64156	98	18	68	12	72
TMR_00274	tmRNA links to Rfam database...	0.33	0.35	0.31	37	66677	89	16	65	8	68
TMR_00278	tmRNA links to Rfam database...	0.18	0.20	0.17	20	67781	101	21	74	6	82
TMR_00279	tmRNA links to Rfam database...	0.37	0.39	0.35	37	68899	90	17	53	20	57
TMR_00280	tmRNA links to Rfam database...	0.15	0.16	0.14	16	65949	113	18	83	12	85
TMR_00283	tmRNA links to Rfam database...	0.07	0.07	0.07	7	65237	104	21	76	7	89
TMR_00289	tmRNA links to Rfam database...	0.24	0.24	0.24	24	67060	86	18	59	9	74
TMR_00290	tmRNA links to Rfam database...	0.36	0.38	0.35	35	64160	89	18	48	23	57
TMR_00296	tmRNA links to Rfam database...	0.30	0.32	0.30	31	68901	86	21	53	12	67
TMR_00298	tmRNA links to Rfam database...	0.22	0.25	0.20	25	68138	104	19	83	2	76
TMR_00300	tmRNA links to Rfam database...	0.38	0.38	0.39	43	70389	82	7	61	14	69
TMR_00301	tmRNA links to Rfam database...	0.26	0.30	0.23	29	82089	103	31	66	6	67
TMR_00302	tmRNA links to Rfam database...	0.23	0.27	0.21	25	77300	107	31	65	11	69
TMR_00305	tmRNA links to Rfam database...	0.17	0.19	0.16	19	60955	105	18	83	4	83
TMR_00306	tmRNA links to Rfam database...	0.21	0.22	0.21	23	64150	96	13	75	8	83
TMR_00310	tmRNA links to Rfam database...	0.32	0.34	0.31	33	63798	87	15	57	15	65
TMR_00317	tmRNA links to Rfam database...	0.38	0.39	0.37	40	68158	78	15	52	11	62
TMR_00331	tmRNA links to Rfam database...	0.20	0.22	0.18	18	66694	105	22	61	22	64
TMR_00332	tmRNA links to Rfam database...	0.27	0.29	0.25	29	67043	96	21	68	7	70
TMR_00334	tmRNA links to Rfam database...	0.55	0.56	0.54	57	66689	72	12	37	23	44
TMR_00337	tmRNA links to Rfam database...	0.39	0.39	0.40	46	82912	83	21	49	13	73
TMR_00340	tmRNA links to Rfam database...	0.37	0.38	0.35	31	64173	84	9	48	27	50
TMR_00341	tmRNA links to Rfam database...	0.33	0.36	0.30	33	63080	93	17	60	16	59
TMR_00343	tmRNA links to Rfam database...	0.36	0.39	0.33	41	64857	88	11	71	6	64
TMR_00345	tmRNA links to Rfam database...	0.44	0.46	0.41	48	63787	79	7	61	11	56
TMR_00346	tmRNA links to Rfam database...	0.24	0.26	0.22	24	64153	92	22	62	8	70
TMR_00348	tmRNA links to Rfam database...	0.16	0.17	0.16	17	77314	110	21	69	20	82
TMR_00352	tmRNA links to Rfam database...	0.08	0.09	0.06	7	95157	141	27	75	39	68
TMR_00353	tmRNA links to Rfam database...	0.32	0.35	0.30	37	84130	113	15	73	25	68
TMR_00357	tmRNA links to Rfam database...	0.29	0.33	0.26	30	82913	101	26	59	16	62
TMR_00358	tmRNA links to Rfam database...	0.40	0.41	0.39	41	74974	93	16	47	30	58
TMR_00361	-	0.25	0.32	0.20	23	93412	113	37	56	20	49
TMR_00366	tmRNA links to Rfam database...	0.25	0.27	0.23	27	67778	97	19	72	6	73
TMR_00372	tmRNA links to Rfam database...	0.34	0.39	0.31	37	70380	100	22	61	17	59
TMR_00374	tmRNA links to Rfam database...	0.11	0.12	0.10	11	81695	122	17	87	18	81
TMR_00375	tmRNA links to Rfam database...	0.29	0.31	0.28	30	73427	104	19	60	25	68
TMR_00376	tmRNA links to Rfam database...	0.29	0.33	0.27	31	74575	101	23	62	16	64
TMR_00378	tmRNA links to Rfam database...	0.17	0.20	0.15	19	67773	107	29	75	3	78
TMR_00383	tmRNA links to Rfam database...	0.21	0.22	0.21	22	66688	94	20	65	9	78
TMR_00384	tmRNA links to Rfam database...	0.43	0.45	0.41	49	65584	75	17	53	5	59
TMR_00393	tmRNA links to Rfam database...	0.23	0.26	0.21	14	53234	98	12	41	45	39
TMR_00395	tmRNA links to Rfam database...	0.34	0.36	0.33	39	64500	82	19	62	1	70
TMR_00398	tmRNA links to Rfam database...	0.28	0.29	0.28	31	65230	85	13	67	5	75
TMR_00399	tmRNA links to Rfam database...	0.30	0.32	0.29	30	64876	86	18	56	12	64
TMR_00404	tmRNA links to Rfam database...	0.20	0.22	0.18	20	67416	98	13	79	6	72
TMR_00408	tmRNA links to Rfam database...	0.55	0.60	0.50	53	65960	72	20	33	19	35
TMR_00409	tmRNA links to Rfam database...	0.63	0.70	0.57	32	68579	86	9	15	62	14
TMR_00411	tmRNA links to Rfam database...	0.37	0.40	0.33	35	60970	85	25	45	15	52
TMR_00415	tmRNA links to Rfam database...	0.23	0.25	0.22	25	67049	90	26	61	3	76
TMR_00419	tmRNA links to Rfam database...	0.35	0.35	0.36	39	81701	93	10	60	23	72
TMR_00422	tmRNA links to Rfam database...	0.50	0.54	0.47	50	67789	76	20	37	19	42
TMR_00423	tmRNA links to Rfam database...	0.30	0.36	0.26	26	63802	94	29	46	19	47
TMR_00427	tmRNA links to Rfam database...	0.15	0.15	0.14	15	67420	98	21	72	5	82
TMR_00429	tmRNA links to Rfam database...	0.42	0.44	0.40	48	74572	81	17	54	10	61
TMR_00430	tmRNA links to Rfam database...	0.13	0.15	0.12	16	82490	120	29	86	5	93
TMR_00431	tmRNA links to Rfam database...	0.32	0.36	0.28	20	51931	82	12	40	30	35
TMR_00432	tmRNA links to Rfam database...	0.25	0.28	0.23	29	79676	103	18	77	8	75
TMR_00433	tmRNA links to Rfam database...	0.40	0.44	0.36	47	80070	93	25	58	10	59
TMR_00439	tmRNA links to Rfam database...	0.29	0.33	0.27	33	68512	106	27	63	16	68
TMR_00441	tmRNA links to Rfam database...	0.22	0.23	0.21	19	62036	92	24	49	19	64
TMR_00443	tmRNA links to Rfam database...	0.23	0.25	0.22	26	67043	107	10	82	15	78
TMR_00448	tmRNA links to Rfam database...	0.21	0.22	0.20	20	62028	93	9	71	13	72
TMR_00451	tmRNA links to Rfam database...	0.15	0.17	0.13	15	63432	103	35	64	4	74
TMR_00457	tmRNA links to Rfam database...	0.30	0.33	0.28	34	78483	99	24	65	10	68
TMR_00458	tmRNA links to Rfam database...	0.32	0.33	0.30	31	63443	80	16	56	8	62
TMR_00460	tmRNA links to Rfam database...	0.40	0.43	0.37	46	79278	86	23	54	9	60
TMR_00465	tmRNA links to Rfam database...	0.15	0.16	0.15	15	64159	98	19	68	11	79
TMR_00469	tmRNA links to Rfam database...	0.17	0.19	0.16	19	64500	111	14	87	10	81
TMR_00472	tmRNA links to Rfam database...	0.26	0.27	0.25	26	64516	87	16	62	9	71
TMR_00478	tmRNA links to Rfam database...	0.21	0.22	0.20	22	71899	95	23	66	6	77
TMR_00498	tmRNA links to Rfam database...	0.38	0.42	0.35	42	68886	89	22	56	11	57
TMR_00499	tmRNA links to Rfam database...	0.22	0.24	0.21	24	64504	99	13	79	7	75
TMR_00501	tmRNA links to Rfam database...	0.10	0.11	0.09	10	62366	110	27	78	5	82
TMR_00502	tmRNA links to Rfam database...	0.36	0.40	0.32	37	75352	92	19	58	15	56
TMR_00503	tmRNA links to Rfam database...	0.44	0.48	0.40	53	67765	81	27	51	3	58
TMR_00519	tmRNA links to Rfam database...	0.14	0.15	0.13	14	63085	101	22	69	10	81
TMR_00520	tmRNA links to Rfam database...	0.17	0.18	0.16	18	63075	102	28	69	5	81
TMR_00522	tmRNA links to Rfam database...	0.27	0.30	0.24	29	63068	94	31	62	1	68
TMR_00528	tmRNA links to Rfam database...	0.23	0.25	0.22	24	63081	92	28	57	7	73
TMR_00540	tmRNA links to Rfam database...	0.26	0.28	0.24	29	73417	98	15	75	8	75
TMR_00541	tmRNA links to Rfam database...	0.23	0.24	0.22	25	61660	101	15	76	10	80
TMR_00544	tmRNA links to Rfam database...	0.35	0.37	0.34	40	89557	97	22	57	18	68
TMR_00547	tmRNA links to Rfam database...	0.46	0.46	0.46	46	65240	72	12	43	17	54
TMR_00553	tmRNA links to Rfam database...	0.27	0.28	0.25	23	48114	76	20	48	8	58
TMR_00559	tmRNA links to Rfam database...	0.32	0.34	0.30	34	62369	85	19	59	7	67
TMR_00560	tmRNA links to Rfam database...	0.19	0.19	0.19	19	60974	95	4	78	13	79
TMR_00562	tmRNA links to Rfam database...	0.21	0.23	0.19	23	72653	102	23	72	7	79
TMR_00563	tmRNA links to Rfam database...	0.31	0.35	0.28	36	75336	98	16	78	4	67
TMR_00566	tmRNA links to Rfam database...	0.29	0.30	0.28	30	60617	91	11	68	12	70
TMR_00568	tmRNA links to Rfam database...	0.39	0.39	0.39	39	60625	76	15	47	14	60
TMR_00570	tmRNA links to Rfam database...	0.38	0.38	0.39	37	60283	73	15	43	15	60
TMR_00571	tmRNA links to Rfam database...	0.50	0.51	0.50	50	60625	71	7	44	20	49
TMR_00576	tmRNA links to Rfam database...	0.43	0.44	0.42	45	60272	74	11	50	13	57
TMR_00579	tmRNA links to Rfam database...	0.23	0.28	0.19	25	80471	116	35	70	11	65
TMR_00580	tmRNA links to Rfam database...	0.43	0.45	0.41	45	60615	82	7	59	16	55
TMR_00581	tmRNA links to Rfam database...	0.20	0.21	0.19	21	62373	96	15	72	9	77
TMR_00584	tmRNA links to Rfam database...	0.27	0.28	0.26	27	60972	91	13	63	15	70
TMR_00586	tmRNA links to Rfam database...	0.47	0.49	0.44	48	60967	74	19	41	14	49
TMR_00587	tmRNA links to Rfam database...	0.36	0.37	0.36	37	61321	84	7	60	17	63
TMR_00588	tmRNA links to Rfam database...	0.34	0.36	0.33	36	77312	79	22	51	6	65
TMR_00594	tmRNA links to Rfam database...	0.21	0.22	0.21	23	79292	94	17	69	8	81
TMR_00596	tmRNA links to Rfam database...	0.16	0.18	0.15	17	78093	107	23	77	7	78
TMR_00599	tmRNA links to Rfam database...	0.24	0.31	0.19	22	63077	98	31	60	7	50
TMR_00600	tmRNA links to Rfam database...	0.21	0.22	0.20	25	79675	103	27	73	3	90
TMR_00601	tmRNA links to Rfam database...	0.32	0.36	0.28	15	58943	88	14	24	50	27
TMR_00603	tmRNA links to Rfam database...	0.43	0.49	0.38	21	60322	91	11	24	56	22
TMR_00604	tmRNA links to Rfam database...	0.48	0.50	0.47	56	62716	75	12	51	12	56
TMR_00605	tmRNA links to Rfam database...	0.35	0.36	0.35	39	74193	86	12	61	13	69
TMR_00606	tmRNA links to Rfam database...	0.54	0.55	0.52	59	68893	69	17	37	15	48
TMR_00609	tmRNA links to Rfam database...	0.56	0.55	0.56	62	63436	64	4	44	16	51
TMR_00610	tmRNA links to Rfam database...	0.64	0.65	0.64	68	62021	54	8	31	15	36
TMR_00611	tmRNA links to Rfam database...	0.46	0.49	0.43	50	61309	69	22	44	3	52
TMR_00612	tmRNA links to Rfam database...	0.32	0.34	0.30	35	60610	88	10	71	7	69
TMR_00614	tmRNA links to Rfam database...	0.31	0.32	0.30	33	60965	83	13	64	6	71
TMR_00615	tmRNA links to Rfam database...	0.56	0.60	0.53	58	63793	63	17	35	11	38
TMR_00616	tmRNA links to Rfam database...	0.36	0.39	0.34	39	67045	86	14	63	9	60
TMR_00617	tmRNA links to Rfam database...	0.29	0.33	0.26	19	34644	67	14	39	14	39
TMR_00623	tmRNA links to Rfam database...	0.41	0.43	0.40	46	61309	72	11	59	2	62
TMR_00624	tmRNA links to Rfam database...	0.36	0.37	0.35	40	62368	87	6	67	14	68
TMR_00625	tmRNA links to Rfam database...	0.23	0.25	0.22	26	78883	110	20	74	16	80
TMR_00626	tmRNA links to Rfam database...	0.47	0.50	0.44	54	67773	78	17	52	9	55
TMR_00680	tmRNA links to Rfam database...	0.43	0.47	0.39	47	67776	86	20	53	13	52
TMR_00681	tmRNA links to Rfam database...	0.25	0.26	0.25	25	65964	89	7	70	12	72
TMR_00683	tmRNA links to Rfam database...	0.19	0.22	0.16	22	82894	129	30	82	17	78
TMR_00686	tmRNA links to Rfam database...	0.24	0.26	0.22	28	71123	108	18	84	6	80
TMR_00687	tmRNA links to Rfam database...	0.33	0.36	0.30	40	71499	100	18	74	8	71
TMR_00696	tmRNA links to Rfam database...	0.24	0.25	0.24	28	84961	109	13	76	20	86
TMR_00698	tmRNA links to Rfam database...	0.16	0.16	0.15	17	63080	94	15	78	1	87
TMR_00699	tmRNA links to Rfam database...	0.23	0.25	0.22	25	67048	94	15	73	6	77
TMR_00702	tmRNA links to Rfam database...	0.13	0.14	0.12	14	67047	107	9	91	7	86
TMR_00703	tmRNA links to Rfam database...	0.21	0.23	0.20	23	67411	99	22	72	5	76
TMR_00706	tmRNA links to Rfam database...	0.48	0.47	0.49	48	66332	66	10	40	16	55
TMR_00711	tmRNA links to Rfam database...	0.43	0.48	0.38	47	67773	87	27	49	11	51
TMR_00712	tmRNA links to Rfam database...	0.21	0.22	0.20	24	78486	108	23	73	12	85
TMR_00716	tmRNA links to Rfam database...	0.10	0.10	0.10	10	62733	101	13	79	9	90

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Matthews Correlation Coeffient, Sensitivity and Positive Predictive Value have been calculated based on the paper by Gardener & Giegerich, 2004.

Table of contents:

Overview

Performance plots

Performance of UNAFold - scored higher in this pairwise comparison

1. Total counts & total scores for UNAFold

2. Individual counts for UNAFold [ download as .csv ]

Performance of RNAwolf - scored lower in this pairwise comparison

1. Total counts & total scores for RNAwolf

2. Individual counts for RNAwolf [ download as .csv ]