CompaRNA - on-line benchmarks of RNA structure prediction methods

Laboratory of Structural Bioinformatics @ Adam Mickiewicz University in Poznan

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Overview

Metric	Contrafold		Vsfold4
MCC	0.551	>	0.335
Average MCC ± 95% Confidence Intervals	0.547 ± 0.014	>	0.333 ± 0.012
Sensitivity	0.537	>	0.308
Positive Predictive Value	0.567	>	0.365
Total TP	29245	>	16789
Total TN	33985965	<	33991615
Total FP	26741	<	32009
Total FP CONTRA	3983	>	3959
Total FP INCONS	18359	<	25189
Total FP COMP	4399	>	2861
Total FN	25181	<	37637
P-value	3.56938820447e-08

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Performance plots

Comparison of performance of Contrafold and Vsfold4. Positive Predictive Value (PPV) is plotted against sensitivity. Each dot represents a single test of each method. See tables below for raw data (individual counts for Contrafold and Vsfold4).
Average Matthews Correlation Coefficients (MCC) with 95% confidence intervals (CIs) were plotted for different RNA families, for which at least 3 members were present in the benchmarking dataset. 'n' denotes the number of MCCs used to calculate the average and CI. See tables below for raw data (individual counts for Contrafold and Vsfold4).
Comparison of average Matthews Correlation Coefficients (MCCs) for Contrafold and Vsfold4. The whiskers correspond to 95% confidence intervals (CIs). 'n' denotes the number of MCCs used to calculate average MCCs and CIs. See tables below for raw data (individual counts for Contrafold and Vsfold4).

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Performance of Contrafold - scored higher in this pairwise comparison

1. Total counts & total scores for Contrafold

Total Base Pair Counts
Total TP	29245
Total TN	33985965
Total FP	26741
Total FP CONTRA	3983
Total FP INCONS	18359
Total FP COMP	4399
Total FN	25181

Total Scores
MCC	0.551
Average MCC ± 95% Confidence Intervals	0.547 ± 0.014
Sensitivity	0.537
Positive Predictive Value	0.567
Nr of predictions	547

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2. Individual counts for Contrafold [ download as .csv ]

RNA Chain	Rfam family	MCC	SENS	PPV	TP	TN	FP	FP CONTRA	FP INCONS	FP COMP	FN
ASE_00001	RNaseP_arch links to Rfam database...	0.80	0.77	0.83	58	34121	21	3	9	9	17
ASE_00002	RNaseP_arch links to Rfam database...	0.59	0.56	0.61	41	35444	30	2	24	4	32
ASE_00004	RNaseP_bact_a links to Rfam database...	0.70	0.68	0.72	66	47803	28	5	21	2	31
ASE_00005	RNaseP_bact_a links to Rfam database...	0.62	0.56	0.69	65	57876	30	0	29	1	52
ASE_00006	RNaseP_bact_a links to Rfam database...	0.52	0.52	0.53	48	47495	47	7	36	4	45
ASE_00007	RNaseP_bact_a links to Rfam database...	0.53	0.49	0.57	54	59591	45	1	39	5	56
ASE_00009	RNaseP_arch links to Rfam database...	0.66	0.64	0.68	43	26043	23	1	19	3	24
ASE_00012	RNaseP_bact_a links to Rfam database...	0.54	0.50	0.58	61	73815	53	2	42	9	62
ASE_00014	RNaseP_arch links to Rfam database...	0.53	0.53	0.53	56	54179	54	6	44	4	50
ASE_00017	RNaseP_nuc links to Rfam database...	0.12	0.14	0.11	9	50957	94	18	56	20	55
ASE_00018	RNaseP_bact_a links to Rfam database...	0.62	0.59	0.66	79	80481	42	2	39	1	55
ASE_00020	RNaseP_bact_a links to Rfam database...	0.68	0.62	0.74	78	73815	31	1	26	4	48
ASE_00022	RNaseP_bact_b links to Rfam database...	0.33	0.31	0.35	39	82918	77	2	69	6	85
ASE_00023	RNaseP_bact_a links to Rfam database...	0.68	0.68	0.68	86	84129	45	4	36	5	41
ASE_00025	RNaseP_nuc links to Rfam database...	0.35	0.38	0.32	27	78521	109	13	45	51	44
ASE_00026	RNaseP_bact_a links to Rfam database...	0.55	0.52	0.59	57	59589	44	3	36	5	53
ASE_00028	RNaseP_bact_b links to Rfam database...	0.69	0.66	0.72	83	84551	44	4	28	12	43
ASE_00029	RNaseP_bact_a links to Rfam database...	0.64	0.61	0.68	75	82917	40	7	29	4	47
ASE_00030	RNaseP_bact_a links to Rfam database...	0.72	0.66	0.77	96	85367	30	4	24	2	49
ASE_00031	RNaseP_bact_a links to Rfam database...	0.58	0.56	0.61	70	86622	51	2	42	7	56
ASE_00032	RNaseP_bact_a links to Rfam database...	0.55	0.52	0.59	61	80097	47	3	39	5	57
ASE_00033	RNaseP_bact_a links to Rfam database...	0.52	0.46	0.60	56	64886	41	1	37	3	65
ASE_00035	RNaseP_bact_a links to Rfam database...	0.40	0.36	0.43	43	70401	62	4	52	6	75
ASE_00036	RNaseP_bact_a links to Rfam database...	0.62	0.58	0.67	76	75742	43	7	30	6	56
ASE_00037	RNaseP_bact_a links to Rfam database...	0.60	0.53	0.69	58	59256	28	1	25	2	52
ASE_00038	RNaseP_bact_a links to Rfam database...	0.54	0.50	0.58	51	53540	41	6	31	4	50
ASE_00040	RNaseP_bact_a links to Rfam database...	0.14	0.14	0.15	19	78875	114	8	101	5	114
ASE_00041	RNaseP_bact_a links to Rfam database...	0.67	0.61	0.73	66	57539	29	2	23	4	42
ASE_00042	RNaseP_bact_a links to Rfam database...	0.57	0.54	0.60	79	89969	57	2	50	5	66
ASE_00044	RNaseP_bact_a links to Rfam database...	0.68	0.67	0.69	70	54513	37	5	27	5	35
ASE_00046	RNaseP_bact_a links to Rfam database...	0.64	0.55	0.73	57	50325	23	1	20	2	46
ASE_00047	RNaseP_bact_a links to Rfam database...	0.56	0.50	0.62	65	74200	42	1	39	2	65
ASE_00052	RNaseP_bact_a links to Rfam database...	0.63	0.55	0.71	62	61338	29	0	25	4	50
ASE_00053	RNaseP_bact_a links to Rfam database...	0.69	0.65	0.72	87	79280	39	10	24	5	46
ASE_00056	-	0.41	0.40	0.43	29	30808	46	4	35	7	43
ASE_00057	RNaseP_bact_a links to Rfam database...	0.69	0.66	0.72	89	82091	41	9	26	6	45
ASE_00064	RNaseP_bact_a links to Rfam database...	0.60	0.56	0.65	50	45374	37	2	25	10	39
ASE_00066	RNaseP_bact_a links to Rfam database...	0.62	0.58	0.66	75	72276	39	3	36	0	55
ASE_00068	RNaseP_bact_a links to Rfam database...	0.69	0.61	0.79	52	37609	14	1	13	0	33
ASE_00069	RNaseP_bact_a links to Rfam database...	0.63	0.59	0.67	83	82905	45	4	36	5	57
ASE_00074	RNaseP_bact_a links to Rfam database...	0.49	0.49	0.50	58	67781	59	7	50	2	61
ASE_00076	RNaseP_bact_a links to Rfam database...	0.47	0.44	0.50	52	68160	56	4	49	3	66
ASE_00077	RNaseP_bact_a links to Rfam database...	0.73	0.67	0.78	58	45076	22	3	13	6	28
ASE_00078	RNaseP_bact_a links to Rfam database...	0.73	0.66	0.81	55	43003	20	0	13	7	28
ASE_00079	RNaseP_bact_a links to Rfam database...	0.56	0.53	0.60	53	55522	39	3	33	3	47
ASE_00080	RNaseP_bact_a links to Rfam database...	0.59	0.57	0.61	70	71517	49	6	38	5	53
ASE_00081	RNaseP_bact_a links to Rfam database...	0.61	0.58	0.64	56	49682	34	5	27	2	41
ASE_00082	RNaseP_bact_a links to Rfam database...	0.79	0.72	0.87	83	70405	24	1	11	12	33
ASE_00083	RNaseP_bact_a links to Rfam database...	0.76	0.71	0.81	78	62385	25	0	18	7	32
ASE_00084	RNaseP_bact_a links to Rfam database...	0.74	0.73	0.76	72	53533	30	2	21	7	27
ASE_00087	RNaseP_bact_a links to Rfam database...	0.74	0.72	0.76	103	88275	33	4	28	1	41
ASE_00089	-	0.50	0.46	0.55	36	31309	30	2	28	0	43
ASE_00090	RNaseP_bact_a links to Rfam database...	0.67	0.67	0.66	68	55508	43	4	31	8	33
ASE_00092	RNaseP_bact_a links to Rfam database...	0.82	0.80	0.85	90	63440	23	6	10	7	23
ASE_00096	RNaseP_bact_a links to Rfam database...	0.70	0.62	0.80	71	63457	20	0	18	2	44
ASE_00099	RNaseP_bact_a links to Rfam database...	0.53	0.51	0.55	61	64510	51	5	44	2	59
ASE_00100	RNaseP_nuc links to Rfam database...	0.26	0.28	0.24	21	82127	115	15	52	48	55
ASE_00104	RNaseP_bact_a links to Rfam database...	0.71	0.69	0.73	82	64148	33	4	27	2	37
ASE_00105	RNaseP_bact_a links to Rfam database...	0.53	0.50	0.57	55	64165	49	7	34	8	56
ASE_00107	RNaseP_bact_a links to Rfam database...	0.69	0.68	0.70	86	73030	38	4	33	1	41
ASE_00108	RNaseP_nuc links to Rfam database...	0.49	0.51	0.48	32	46904	72	10	25	37	31
ASE_00111	RNaseP_nuc links to Rfam database...	0.18	0.21	0.15	12	50008	84	20	46	18	45
ASE_00112	RNaseP_bact_a links to Rfam database...	0.76	0.72	0.81	83	75364	29	4	15	10	33
ASE_00115	RNaseP_bact_a links to Rfam database...	0.69	0.69	0.69	70	54513	40	6	26	8	31
ASE_00116	RNaseP_arch links to Rfam database...	0.46	0.42	0.50	28	31570	31	0	28	3	38
ASE_00118	RNaseP_bact_a links to Rfam database...	0.64	0.62	0.66	63	60631	35	4	28	3	39
ASE_00119	RNaseP_bact_a links to Rfam database...	0.73	0.72	0.74	78	62729	31	3	25	3	30
ASE_00120	RNaseP_arch links to Rfam database...	0.60	0.57	0.64	54	46886	31	6	25	0	40
ASE_00121	RNaseP_arch links to Rfam database...	0.28	0.27	0.29	25	45063	64	6	56	2	67
ASE_00122	RNaseP_bact_a links to Rfam database...	0.68	0.65	0.71	57	43285	25	1	22	2	31
ASE_00123	RNaseP_bact_a links to Rfam database...	0.57	0.54	0.61	46	38427	34	4	26	4	39
ASE_00125	RNaseP_bact_a links to Rfam database...	0.76	0.70	0.82	62	39264	22	3	11	8	26
ASE_00126	RNaseP_bact_a links to Rfam database...	0.61	0.59	0.64	48	40395	34	2	25	7	34
ASE_00128	RNaseP_bact_a links to Rfam database...	0.79	0.72	0.88	72	53219	16	1	9	6	28
ASE_00129	RNaseP_bact_a links to Rfam database...	0.70	0.66	0.74	73	62737	30	1	24	5	38
ASE_00131	RNaseP_bact_a links to Rfam database...	0.71	0.65	0.79	55	39270	25	1	14	10	30
ASE_00132	RNaseP_bact_a links to Rfam database...	0.57	0.48	0.67	46	50334	25	2	21	2	49
ASE_00134	RNaseP_bact_a links to Rfam database...	0.43	0.41	0.46	39	50318	50	3	43	4	56
ASE_00135	RNaseP_bact_a links to Rfam database...	0.63	0.57	0.69	62	63100	35	1	27	7	47
ASE_00136	RNaseP_bact_a links to Rfam database...	0.60	0.54	0.66	50	48129	37	1	25	11	42
ASE_00137	RNaseP_bact_a links to Rfam database...	0.79	0.76	0.82	74	48426	20	4	12	4	24
ASE_00138	RNaseP_bact_a links to Rfam database...	0.59	0.56	0.63	45	40399	27	7	19	1	36
ASE_00139	RNaseP_bact_a links to Rfam database...	0.66	0.59	0.74	61	54203	25	0	21	4	43
ASE_00140	RNaseP_bact_a links to Rfam database...	0.76	0.70	0.83	88	70770	19	3	15	1	37
ASE_00142	RNaseP_bact_a links to Rfam database...	0.60	0.59	0.62	72	67045	50	5	39	6	50
ASE_00145	RNaseP_arch links to Rfam database...	0.60	0.59	0.60	66	70015	50	7	37	6	45
ASE_00146	RNaseP_bact_a links to Rfam database...	0.50	0.48	0.53	60	70762	55	7	47	1	64
ASE_00151	RNaseP_bact_a links to Rfam database...	0.46	0.45	0.47	44	51909	52	11	39	2	54
ASE_00153	RNaseP_nuc links to Rfam database...	0.41	0.42	0.40	31	57553	80	7	39	34	42
ASE_00154	RNaseP_arch links to Rfam database...	0.74	0.72	0.76	77	65240	31	2	22	7	30
ASE_00155	RNaseP_arch links to Rfam database...	0.60	0.58	0.61	83	93392	56	4	49	3	59
ASE_00163	RNaseP_bact_a links to Rfam database...	0.34	0.32	0.37	30	53219	62	4	48	10	63
ASE_00165	RNaseP_bact_a links to Rfam database...	0.71	0.66	0.77	67	52888	21	4	16	1	34
ASE_00168	RNaseP_nuc links to Rfam database...	0.32	0.38	0.27	24	60636	84	21	45	18	40
ASE_00169	RNaseP_bact_a links to Rfam database...	0.54	0.50	0.58	53	57200	43	1	37	5	54
ASE_00170	RNaseP_bact_a links to Rfam database...	0.65	0.61	0.70	57	48746	26	4	21	1	36
ASE_00171	RNaseP_bact_a links to Rfam database...	0.74	0.71	0.77	67	48429	24	5	15	4	27
ASE_00172	RNaseP_bact_a links to Rfam database...	0.83	0.77	0.88	82	58903	15	2	9	4	24
ASE_00174	RNaseP_bact_a links to Rfam database...	0.62	0.58	0.66	63	60979	34	7	26	1	46
ASE_00175	RNaseP_bact_a links to Rfam database...	0.35	0.34	0.36	36	59932	73	3	60	10	71
ASE_00176	RNaseP_bact_a links to Rfam database...	0.56	0.51	0.62	56	59941	40	4	30	6	54
ASE_00179	RNaseP_bact_a links to Rfam database...	0.75	0.69	0.81	58	44181	21	3	11	7	26
ASE_00180	RNaseP_bact_a links to Rfam database...	0.77	0.71	0.85	71	51276	18	4	9	5	29
ASE_00181	RNaseP_bact_a links to Rfam database...	0.44	0.42	0.46	45	57532	55	5	48	2	61
ASE_00182	RNaseP_bact_a links to Rfam database...	0.66	0.63	0.70	86	84132	38	2	35	1	50
ASE_00183	RNaseP_bact_a links to Rfam database...	0.71	0.70	0.72	79	61315	40	2	29	9	34
ASE_00184	RNaseP_bact_a links to Rfam database...	0.76	0.77	0.75	79	54509	30	5	22	3	23
ASE_00185	RNaseP_bact_a links to Rfam database...	0.74	0.69	0.80	88	73426	28	2	20	6	40
ASE_00186	RNaseP_bact_a links to Rfam database...	0.75	0.72	0.79	95	78882	35	3	23	9	37
ASE_00187	RNaseP_arch links to Rfam database...	0.38	0.37	0.40	42	68531	68	5	57	6	73
ASE_00189	RNaseP_bact_b links to Rfam database...	0.59	0.53	0.66	54	63108	35	0	28	7	48
ASE_00190	RNaseP_bact_b links to Rfam database...	0.53	0.46	0.61	41	45384	33	3	23	7	49
ASE_00192	RNaseP_bact_b links to Rfam database...	0.65	0.61	0.70	81	84551	40	5	29	6	52
ASE_00194	RNaseP_bact_b links to Rfam database...	0.48	0.45	0.50	54	73429	59	4	49	6	65
ASE_00195	-	0.65	0.60	0.71	80	86208	35	2	30	3	53
ASE_00196	RNaseP_arch links to Rfam database...	0.75	0.76	0.74	57	31549	26	2	18	6	18
ASE_00197	RNaseP_bact_a links to Rfam database...	0.62	0.59	0.66	85	89125	49	3	40	6	60
ASE_00198	RNaseP_bact_a links to Rfam database...	0.71	0.69	0.73	70	52554	30	4	22	4	32
ASE_00203	RNaseP_bact_a links to Rfam database...	0.78	0.74	0.82	71	46578	22	4	12	6	25
ASE_00204	RNaseP_bact_b links to Rfam database...	0.57	0.54	0.61	60	67798	46	5	33	8	52
ASE_00205	RNaseP_arch links to Rfam database...	0.45	0.46	0.45	41	45964	60	7	44	9	49
ASE_00209	RNaseP_arch links to Rfam database...	0.56	0.51	0.61	45	42997	31	3	26	2	43
ASE_00210	RNaseP_arch links to Rfam database...	0.58	0.60	0.57	39	27192	31	7	23	1	26
ASE_00212	RNaseP_bact_a links to Rfam database...	0.68	0.64	0.71	95	93828	46	3	35	8	53
ASE_00213	RNaseP_arch links to Rfam database...	0.58	0.58	0.58	38	27196	30	5	22	3	28
ASE_00214	RNaseP_bact_a links to Rfam database...	0.80	0.78	0.82	80	56183	27	3	14	10	23
ASE_00215	RNaseP_bact_a links to Rfam database...	0.54	0.51	0.57	50	48429	39	4	33	2	49
ASE_00216	RNaseP_bact_a links to Rfam database...	0.58	0.59	0.58	48	39257	36	9	26	1	34
ASE_00217	RNaseP_bact_a links to Rfam database...	0.42	0.39	0.46	35	40394	47	2	39	6	55
ASE_00221	RNaseP_bact_a links to Rfam database...	0.66	0.60	0.72	70	64523	31	1	26	4	47
ASE_00227	RNaseP_bact_a links to Rfam database...	0.31	0.29	0.34	39	78887	77	6	71	0	94
ASE_00228	RNaseP_bact_a links to Rfam database...	0.79	0.78	0.80	67	46887	20	8	9	3	19
ASE_00229	RNaseP_bact_a links to Rfam database...	0.67	0.64	0.71	56	42407	28	4	19	5	31
ASE_00231	RNaseP_bact_a links to Rfam database...	0.77	0.75	0.79	72	47804	20	3	16	1	24
ASE_00232	RNaseP_bact_a links to Rfam database...	0.64	0.64	0.64	54	38418	33	10	21	2	30
ASE_00234	RNaseP_bact_a links to Rfam database...	0.55	0.50	0.60	64	75360	47	3	39	5	65
ASE_00237	RNaseP_nuc links to Rfam database...	0.08	0.09	0.07	5	45683	79	14	51	14	51
ASE_00238	RNaseP_bact_a links to Rfam database...	0.68	0.62	0.75	71	64166	26	1	23	2	43
ASE_00240	RNaseP_bact_a links to Rfam database...	0.41	0.39	0.43	36	46581	51	1	47	3	57
ASE_00241	RNaseP_bact_a links to Rfam database...	0.79	0.74	0.85	64	43881	17	2	9	6	23
ASE_00242	RNaseP_bact_a links to Rfam database...	0.76	0.72	0.79	81	60973	24	6	15	3	31
ASE_00246	RNaseP_nuc links to Rfam database...	0.36	0.37	0.34	25	48132	70	12	36	22	42
ASE_00247	RNaseP_nuc links to Rfam database...	0.16	0.19	0.14	12	54201	94	19	53	22	52
ASE_00248	RNaseP_bact_a links to Rfam database...	0.62	0.58	0.67	66	62383	36	1	31	4	48
ASE_00250	RNaseP_bact_a links to Rfam database...	0.61	0.57	0.66	75	78889	45	2	37	6	56
ASE_00254	RNaseP_bact_a links to Rfam database...	0.77	0.73	0.81	60	36782	20	5	9	6	22
ASE_00255	RNaseP_bact_a links to Rfam database...	0.64	0.62	0.67	80	74571	46	4	36	6	50
ASE_00257	RNaseP_bact_a links to Rfam database...	0.77	0.74	0.81	72	50951	21	2	15	4	25
ASE_00259	RNaseP_bact_a links to Rfam database...	0.46	0.41	0.51	50	73054	53	5	44	4	71
ASE_00263	RNaseP_bact_a links to Rfam database...	0.56	0.56	0.57	67	70383	50	4	46	0	53
ASE_00264	RNaseP_nuc links to Rfam database...	0.43	0.43	0.43	43	49041	67	9	48	10	57
ASE_00267	RNaseP_bact_a links to Rfam database...	0.49	0.47	0.52	41	45071	44	3	35	6	47
ASE_00270	RNaseP_bact_a links to Rfam database...	0.72	0.70	0.75	89	72271	33	3	27	3	39
ASE_00274	RNaseP_bact_a links to Rfam database...	0.48	0.47	0.51	48	55516	49	6	41	2	55
ASE_00277	RNaseP_bact_a links to Rfam database...	0.61	0.59	0.63	54	48119	35	5	27	3	37
ASE_00279	RNaseP_bact_a links to Rfam database...	0.52	0.51	0.53	52	53202	48	8	39	1	49
ASE_00280	RNaseP_bact_a links to Rfam database...	0.61	0.58	0.64	57	51914	35	4	28	3	41
ASE_00281	RNaseP_bact_a links to Rfam database...	0.70	0.65	0.75	57	44475	26	1	18	7	31
ASE_00282	RNaseP_bact_a links to Rfam database...	0.49	0.47	0.51	60	77698	59	9	48	2	67
ASE_00283	RNaseP_bact_a links to Rfam database...	0.64	0.63	0.66	67	61674	41	4	31	6	40
ASE_00284	RNaseP_bact_a links to Rfam database...	0.65	0.63	0.67	68	58209	40	6	28	6	40
ASE_00285	RNaseP_bact_a links to Rfam database...	0.83	0.79	0.87	96	68896	23	3	11	9	26
ASE_00286	RNaseP_bact_a links to Rfam database...	0.73	0.70	0.77	64	46582	24	1	18	5	28
ASE_00287	RNaseP_bact_a links to Rfam database...	0.68	0.65	0.72	67	54853	32	3	23	6	36
ASE_00288	RNaseP_bact_a links to Rfam database...	0.61	0.55	0.69	51	45982	27	3	20	4	42
ASE_00291	-	0.51	0.49	0.53	46	48430	43	3	37	3	48
ASE_00292	RNaseP_bact_a links to Rfam database...	0.59	0.53	0.66	73	81699	43	2	36	5	65
ASE_00295	RNaseP_bact_a links to Rfam database...	0.66	0.62	0.70	81	73804	37	3	32	2	50
ASE_00296	RNaseP_bact_a links to Rfam database...	0.55	0.54	0.57	78	91670	61	5	53	3	67
ASE_00297	RNaseP_bact_a links to Rfam database...	0.68	0.67	0.68	66	52878	37	5	26	6	32
ASE_00298	RNaseP_bact_a links to Rfam database...	0.28	0.27	0.29	31	67422	79	7	68	4	82
ASE_00299	RNaseP_bact_a links to Rfam database...	0.51	0.51	0.52	51	49356	54	3	45	6	49
ASE_00313	RNaseP_nuc links to Rfam database...	0.54	0.56	0.52	50	62384	69	9	38	22	39
ASE_00318	RNaseP_bact_b links to Rfam database...	0.63	0.60	0.66	71	80093	40	12	24	4	47
ASE_00327	RNaseP_nuc links to Rfam database...	0.81	0.80	0.83	71	57205	34	3	12	19	18
ASE_00328	RNaseP_bact_b links to Rfam database...	0.63	0.59	0.67	66	72673	41	5	27	9	46
ASE_00330	RNaseP_nuc links to Rfam database...	0.78	0.78	0.78	70	56190	41	1	19	21	20
ASE_00332	RNaseP_bact_a links to Rfam database...	0.56	0.55	0.58	76	81678	60	2	54	4	62
ASE_00335	RNaseP_bact_b links to Rfam database...	0.62	0.57	0.68	66	75369	44	2	29	13	50
ASE_00337	RNaseP_nuc links to Rfam database...	0.52	0.54	0.51	38	39266	51	5	31	15	33
ASE_00338	RNaseP_nuc links to Rfam database...	0.68	0.66	0.71	65	66338	45	4	23	18	33
ASE_00339	RNaseP_bact_a links to Rfam database...	0.74	0.71	0.78	84	80092	36	0	24	12	35
ASE_00340	RNaseP_bact_a links to Rfam database...	0.47	0.45	0.49	38	45978	44	4	36	4	47
ASE_00342	RNaseP_bact_a links to Rfam database...	0.67	0.64	0.70	74	62376	33	4	27	2	41
ASE_00343	RNaseP_bact_a links to Rfam database...	0.70	0.65	0.75	73	83339	39	1	23	15	40
ASE_00346	RNaseP_arch links to Rfam database...	0.34	0.34	0.35	33	48111	67	4	57	6	64
ASE_00353	RNaseP_bact_a links to Rfam database...	0.77	0.75	0.78	80	57868	29	1	21	7	27
ASE_00359	RNaseP_arch links to Rfam database...	0.49	0.48	0.51	38	42703	44	3	34	7	42
ASE_00360	RNaseP_arch links to Rfam database...	0.31	0.31	0.32	20	29341	43	8	34	1	45
ASE_00361	RNaseP_bact_a links to Rfam database...	0.64	0.61	0.67	77	75351	42	8	30	4	50
ASE_00362	RNaseP_bact_a links to Rfam database...	0.60	0.59	0.60	54	48115	38	2	34	2	37
ASE_00363	RNaseP_bact_a links to Rfam database...	0.78	0.77	0.80	72	51270	25	1	17	7	22
ASE_00364	RNaseP_bact_a links to Rfam database...	0.74	0.71	0.77	75	54187	33	3	20	10	30
ASE_00366	RNaseP_bact_a links to Rfam database...	0.37	0.38	0.36	37	58550	68	7	59	2	61
ASE_00367	RNaseP_bact_a links to Rfam database...	0.50	0.50	0.50	43	42985	49	8	35	6	43
ASE_00369	RNaseP_bact_a links to Rfam database...	0.75	0.72	0.78	77	55846	28	1	21	6	30
ASE_00370	RNaseP_bact_a links to Rfam database...	0.63	0.63	0.62	53	41820	35	4	28	3	31
ASE_00372	RNaseP_bact_a links to Rfam database...	0.70	0.68	0.72	68	51908	33	4	23	6	32
ASE_00374	RNaseP_bact_a links to Rfam database...	0.74	0.73	0.74	64	44764	23	5	17	1	24
ASE_00375	RNaseP_bact_a links to Rfam database...	0.85	0.77	0.93	85	60287	12	1	5	6	25
ASE_00376	RNaseP_bact_a links to Rfam database...	0.61	0.60	0.63	63	56853	41	4	33	4	42
ASE_00377	RNaseP_bact_a links to Rfam database...	0.77	0.76	0.78	81	57526	29	4	19	6	26
ASE_00379	RNaseP_bact_a links to Rfam database...	0.60	0.58	0.63	52	45973	39	4	27	8	37
ASE_00380	RNaseP_bact_a links to Rfam database...	0.61	0.57	0.67	56	54862	34	7	21	6	43
ASE_00382	RNaseP_bact_a links to Rfam database...	0.58	0.56	0.59	47	41826	36	6	26	4	37
ASE_00383	RNaseP_bact_a links to Rfam database...	0.74	0.72	0.75	76	54514	32	3	22	7	29
ASE_00384	RNaseP_bact_a links to Rfam database...	0.78	0.76	0.80	70	48428	22	2	16	4	22
ASE_00385	RNaseP_bact_a links to Rfam database...	0.59	0.58	0.59	47	41826	33	5	27	1	34
ASE_00386	RNaseP_bact_a links to Rfam database...	0.67	0.66	0.68	63	50310	36	1	29	6	33
ASE_00387	RNaseP_bact_a links to Rfam database...	0.69	0.65	0.73	68	55852	27	1	24	2	36
ASE_00388	RNaseP_bact_a links to Rfam database...	0.72	0.67	0.78	60	45676	22	1	16	5	29
ASE_00390	RNaseP_bact_a links to Rfam database...	0.65	0.64	0.67	54	42114	37	3	24	10	31
ASE_00393	RNaseP_bact_a links to Rfam database...	0.72	0.68	0.77	63	47813	26	2	17	7	30
ASE_00394	RNaseP_bact_a links to Rfam database...	0.80	0.80	0.81	74	46880	20	4	13	3	19
ASE_00395	RNaseP_bact_a links to Rfam database...	0.68	0.68	0.69	57	41533	29	5	21	3	27
ASE_00396	RNaseP_bact_a links to Rfam database...	0.56	0.54	0.58	45	41538	34	2	31	1	38
ASE_00397	RNaseP_bact_a links to Rfam database...	0.64	0.64	0.65	67	54512	41	6	30	5	38
ASE_00398	RNaseP_bact_a links to Rfam database...	0.68	0.63	0.74	65	55857	30	1	22	7	39
ASE_00400	RNaseP_bact_a links to Rfam database...	0.66	0.63	0.70	67	57874	31	1	28	2	39
ASE_00401	RNaseP_bact_a links to Rfam database...	0.63	0.63	0.64	79	76904	46	7	38	1	47
ASE_00402	RNaseP_bact_a links to Rfam database...	0.78	0.74	0.83	63	42410	18	1	12	5	22
ASE_00403	RNaseP_bact_a links to Rfam database...	0.39	0.36	0.41	39	55850	61	3	53	5	68
ASE_00404	RNaseP_bact_a links to Rfam database...	0.54	0.53	0.55	45	42989	38	2	35	1	40
ASE_00406	RNaseP_bact_a links to Rfam database...	0.72	0.71	0.74	67	48737	29	6	18	5	27
ASE_00408	-	0.77	0.76	0.77	54	32315	19	2	14	3	17
ASE_00409	-	0.69	0.63	0.75	52	40972	18	0	17	1	31
ASE_00411	RNaseP_bact_a links to Rfam database...	0.56	0.53	0.59	47	49376	34	7	25	2	42
ASE_00412	RNaseP_bact_a links to Rfam database...	0.63	0.59	0.67	62	58218	40	4	27	9	43
ASE_00413	RNaseP_bact_a links to Rfam database...	0.49	0.48	0.50	39	44473	43	10	29	4	42
ASE_00414	RNaseP_bact_a links to Rfam database...	0.47	0.45	0.49	43	46272	52	1	44	7	52
ASE_00415	RNaseP_bact_a links to Rfam database...	0.54	0.52	0.56	54	54849	50	3	40	7	49
ASE_00416	RNaseP_bact_a links to Rfam database...	0.61	0.58	0.63	74	77304	51	5	38	8	53
ASE_00417	RNaseP_arch links to Rfam database...	0.47	0.47	0.47	47	54516	55	2	50	3	53
ASE_00418	RNaseP_arch links to Rfam database...	0.06	0.07	0.07	5	38706	72	5	65	2	70
ASE_00419	RNaseP_bact_a links to Rfam database...	0.77	0.77	0.78	79	54845	24	9	13	2	24
ASE_00422	RNaseP_bact_a links to Rfam database...	0.68	0.67	0.68	63	46879	34	5	24	5	31
ASE_00423	RNaseP_bact_a links to Rfam database...	0.67	0.66	0.68	72	56847	36	7	27	2	37
ASE_00426	RNaseP_bact_a links to Rfam database...	0.57	0.53	0.63	57	60984	35	7	27	1	51
ASE_00428	RNaseP_bact_a links to Rfam database...	0.67	0.62	0.73	78	76529	38	2	27	9	47
ASE_00429	-	0.44	0.41	0.48	27	28147	36	4	25	7	39
ASE_00430	RNaseP_bact_a links to Rfam database...	0.69	0.68	0.70	66	46877	35	5	23	7	31
ASE_00431	RNaseP_bact_a links to Rfam database...	0.54	0.51	0.58	48	46277	49	0	35	14	47
ASE_00434	RNaseP_bact_b links to Rfam database...	0.67	0.63	0.71	69	68168	42	3	25	14	41
ASE_00437	RNaseP_bact_a links to Rfam database...	0.46	0.41	0.52	55	79296	53	1	49	3	80
ASE_00438	RNaseP_bact_a links to Rfam database...	0.66	0.61	0.71	71	65966	32	2	27	3	45
ASE_00441	RNaseP_bact_a links to Rfam database...	0.82	0.76	0.89	85	64166	20	2	8	10	27
ASE_00447	RNaseP_bact_a links to Rfam database...	0.73	0.68	0.79	79	60278	27	0	21	6	37
ASE_00448	RNaseP_bact_a links to Rfam database...	0.40	0.38	0.42	42	64162	65	8	49	8	70
ASE_00451	RNaseP_bact_a links to Rfam database...	0.74	0.69	0.79	86	70767	24	2	21	1	39
CRW_00016	Intron_gpI links to Rfam database...	0.73	0.68	0.79	81	77319	37	0	21	16	39
CRW_00608	-	0.84	0.78	0.90	62	35709	17	0	7	10	17
CRW_00610	Intron_gpI links to Rfam database...	0.50	0.49	0.51	40	36237	41	9	29	3	41
CRW_00611	-	0.89	0.81	0.97	61	31312	9	0	2	7	14
CRW_00613	Intron_gpI links to Rfam database...	0.79	0.77	0.81	60	34906	22	1	13	8	18
CRW_00618	Intron_gpI links to Rfam database...	0.20	0.21	0.19	13	56213	75	8	46	21	48
CRW_00629	-	0.58	0.58	0.59	71	91257	53	13	37	3	51
CRW_00632	-	0.72	0.71	0.73	91	82904	39	3	30	6	37
CRW_00633	Intron_gpI links to Rfam database...	0.58	0.55	0.62	58	63453	37	8	27	2	48
CRW_00634	Intron_gpI links to Rfam database...	0.58	0.59	0.57	55	64524	43	12	29	2	39
CRW_00641	-	0.85	0.87	0.84	66	39824	21	4	9	8	10
CRW_00642	-	0.53	0.58	0.48	38	47198	54	12	30	12	27
CRW_00645	-	0.59	0.61	0.58	41	35440	40	5	25	10	26
CRW_00646	-	0.52	0.53	0.51	34	34913	41	7	26	8	30
CRW_00651	-	0.49	0.51	0.47	62	99995	78	14	57	7	59
CRW_00653	-	0.92	0.90	0.93	121	94700	14	1	8	5	13
CRW_00654	-	0.85	0.81	0.89	101	78096	19	4	9	6	23
CRW_00655	-	0.83	0.79	0.88	98	89141	20	2	12	6	26
CRW_00656	-	0.66	0.64	0.68	82	90404	47	12	27	8	47
CRW_00658	-	0.44	0.46	0.42	47	74579	74	18	47	9	55
CRW_00659	-	0.43	0.48	0.40	29	32312	52	12	32	8	32
CRW_00660	-	0.46	0.47	0.46	28	22094	36	3	30	3	32
CRW_00661	-	0.09	0.10	0.08	5	24250	57	22	33	2	46
CRW_00662	-	0.40	0.40	0.39	26	28614	47	7	33	7	39
CRW_00663	-	0.10	0.10	0.10	6	26044	58	2	54	2	55
CRW_00664	-	0.23	0.24	0.22	19	53543	74	13	53	8	59
CRW_00665	-	0.18	0.19	0.18	9	23602	42	12	30	0	39
CRW_00666	-	0.59	0.59	0.59	74	96016	57	7	44	6	52
CRW_00669	-	0.66	0.61	0.72	73	97359	45	3	26	16	46
CRW_00670	Intron_gpI links to Rfam database...	0.76	0.71	0.83	85	70022	19	0	18	1	35
CRW_00671	Intron_gpI links to Rfam database...	0.73	0.70	0.77	82	62728	31	1	24	6	35
CRW_00672	Intron_gpI links to Rfam database...	0.53	0.52	0.55	58	72284	55	8	40	7	53
CRW_00673	-	0.77	0.77	0.77	81	100023	44	15	9	20	24
CRW_00674	Intron_gpI links to Rfam database...	0.70	0.66	0.74	82	83325	34	5	24	5	42
CRW_00676	Intron_gpI links to Rfam database...	0.42	0.44	0.40	51	93400	81	20	57	4	64
CRW_00677	-	0.61	0.61	0.62	64	71906	47	8	32	7	41
CRW_00679	-	0.42	0.43	0.41	46	76524	72	15	51	6	61
CRW_00686	-	0.65	0.64	0.66	80	95145	52	5	36	11	45
CRW_00687	-	0.60	0.64	0.57	42	28606	33	7	25	1	24
CRW_00688	-	0.85	0.82	0.89	47	21892	10	2	4	4	10
CRW_00689	-	0.67	0.69	0.65	53	33588	34	7	22	5	24
CRW_00690	-	0.76	0.72	0.81	50	33349	21	2	10	9	19
CRW_00691	-	0.63	0.63	0.63	42	27194	30	2	23	5	25
CRW_00692	Intron_gpI links to Rfam database...	0.45	0.44	0.47	40	68549	53	16	30	7	50
CRW_00693	-	0.69	0.69	0.69	84	89131	58	3	35	20	38
CRW_00694	-	0.66	0.66	0.67	80	85785	46	4	36	6	42
CRW_00699	-	0.75	0.74	0.76	93	91684	35	2	27	6	33
CRW_00703	-	0.58	0.61	0.56	40	40399	37	7	24	6	26
CRW_00715	-	0.92	0.87	0.98	90	69286	5	0	2	3	14
CRW_00721	-	0.63	0.65	0.61	44	58581	52	8	20	24	24
PDB_00078	-	0.55	0.54	0.55	62	49658	50	6	44	0	53
PDB_00278	-	0.20	0.19	0.21	14	24909	53	4	49	0	58
PDB_00423	-	0.15	0.15	0.16	11	26727	58	6	52	0	63
PDB_00701	-	0.16	0.16	0.16	17	45344	90	7	83	0	92
PDB_00747	-	0.82	0.75	0.90	60	24464	8	1	6	1	20
PDB_00827	Intron_gpI links to Rfam database...	0.77	0.65	0.90	53	26969	8	0	6	2	28
PDB_00917	-	0.51	0.49	0.53	47	35156	48	2	40	6	48
PDB_00919	RNaseP_bact_a links to Rfam database...	0.56	0.52	0.59	54	44162	41	5	32	4	49
PDB_01129	-	0.30	0.28	0.32	20	35448	48	9	34	5	51
PDB_01157	-	0.48	0.46	0.51	45	49997	45	8	36	1	53
RFA_00597	Telomerase-vert links to Rfam database...	0.60	0.61	0.59	67	97789	69	16	31	22	42
RFA_00598	Telomerase-vert links to Rfam database...	0.47	0.47	0.48	47	84569	79	6	44	29	54
RFA_00601	Telomerase-vert links to Rfam database...	0.33	0.36	0.30	41	99097	108	37	60	11	73
TMR_00007	tmRNA links to Rfam database...	0.80	0.75	0.84	81	61680	22	3	12	7	27
TMR_00008	tmRNA links to Rfam database...	0.60	0.58	0.63	62	65967	48	11	26	11	44
TMR_00010	tmRNA links to Rfam database...	0.36	0.34	0.37	33	57881	62	6	50	6	63
TMR_00012	tmRNA links to Rfam database...	0.40	0.42	0.39	34	64533	74	17	36	21	47
TMR_00014	tmRNA links to Rfam database...	0.72	0.70	0.74	77	68531	37	11	16	10	33
TMR_00017	tmRNA links to Rfam database...	0.49	0.44	0.54	45	67078	42	5	33	4	57
TMR_00018	tmRNA links to Rfam database...	0.38	0.37	0.40	34	64535	55	13	38	4	58
TMR_00028	tmRNA links to Rfam database...	0.69	0.68	0.70	66	62741	35	5	23	7	31
TMR_00030	tmRNA links to Rfam database...	0.37	0.35	0.39	39	75754	67	10	52	5	72
TMR_00034	tmRNA links to Rfam database...	0.62	0.62	0.62	68	59922	48	10	31	7	42
TMR_00035	tmRNA links to Rfam database...	0.52	0.55	0.49	54	67786	63	13	43	7	44
TMR_00036	tmRNA links to Rfam database...	0.69	0.61	0.77	62	90444	51	5	14	32	39
TMR_00038	tmRNA links to Rfam database...	0.26	0.25	0.26	28	71146	85	15	64	6	82
TMR_00042	tmRNA links to Rfam database...	0.29	0.30	0.29	29	62736	74	13	57	4	69
TMR_00046	tmRNA links to Rfam database...	0.60	0.58	0.62	56	62745	44	6	28	10	40
TMR_00047	tmRNA links to Rfam database...	0.23	0.25	0.22	14	48452	68	13	37	18	43
TMR_00048	tmRNA links to Rfam database...	0.40	0.41	0.40	39	64882	69	13	46	10	56
TMR_00049	tmRNA links to Rfam database...	0.58	0.56	0.59	49	63107	50	5	29	16	38
TMR_00051	tmRNA links to Rfam database...	0.66	0.63	0.69	59	65618	44	2	24	18	35
TMR_00055	tmRNA links to Rfam database...	0.43	0.40	0.46	46	78902	56	15	40	1	68
TMR_00057	tmRNA links to Rfam database...	0.24	0.28	0.21	22	73815	93	19	64	10	57
TMR_00061	tmRNA links to Rfam database...	0.36	0.34	0.37	34	59593	68	8	50	10	65
TMR_00062	tmRNA links to Rfam database...	0.59	0.61	0.57	63	78496	63	7	40	16	41
TMR_00064	tmRNA links to Rfam database...	0.39	0.38	0.41	39	76932	57	17	40	0	64
TMR_00065	tmRNA links to Rfam database...	0.49	0.49	0.50	52	76531	57	16	37	4	54
TMR_00067	tmRNA links to Rfam database...	0.45	0.45	0.46	51	82104	66	7	53	6	63
TMR_00073	tmRNA links to Rfam database...	0.66	0.62	0.71	72	65602	30	5	24	1	45
TMR_00076	tmRNA links to Rfam database...	0.47	0.48	0.46	48	70771	68	19	38	11	52
TMR_00080	tmRNA links to Rfam database...	0.43	0.42	0.44	40	70410	50	15	35	0	56
TMR_00081	tmRNA links to Rfam database...	0.50	0.43	0.58	46	67082	33	8	25	0	60
TMR_00082	tmRNA links to Rfam database...	0.29	0.28	0.30	27	67807	64	9	53	2	69
TMR_00083	tmRNA links to Rfam database...	0.68	0.67	0.69	70	68163	42	4	28	10	35
TMR_00092	tmRNA links to Rfam database...	0.62	0.65	0.59	66	67417	54	11	34	9	35
TMR_00093	tmRNA links to Rfam database...	0.41	0.39	0.43	40	64167	63	14	40	9	62
TMR_00096	tmRNA links to Rfam database...	0.30	0.28	0.33	28	64894	67	13	45	9	72
TMR_00101	tmRNA links to Rfam database...	0.62	0.61	0.64	65	64160	50	8	28	14	42
TMR_00102	tmRNA links to Rfam database...	0.34	0.34	0.35	34	64163	68	12	52	4	67
TMR_00103	tmRNA links to Rfam database...	0.55	0.58	0.53	63	64142	60	16	40	4	45
TMR_00104	-	0.09	0.10	0.09	7	66714	79	25	49	5	63
TMR_00106	tmRNA links to Rfam database...	0.56	0.51	0.62	61	90001	42	12	26	4	59
TMR_00109	tmRNA links to Rfam database...	0.41	0.42	0.40	51	88283	78	21	55	2	71
TMR_00111	tmRNA links to Rfam database...	0.54	0.52	0.56	63	90413	54	12	37	5	59
TMR_00116	tmRNA links to Rfam database...	0.74	0.67	0.81	70	64894	34	1	15	18	34
TMR_00117	tmRNA links to Rfam database...	0.73	0.70	0.75	83	80090	36	9	18	9	35
TMR_00118	tmRNA links to Rfam database...	0.53	0.52	0.55	62	81293	60	7	44	9	58
TMR_00119	tmRNA links to Rfam database...	0.65	0.63	0.67	66	71912	41	4	28	9	38
TMR_00123	tmRNA links to Rfam database...	0.53	0.51	0.55	52	66335	52	4	39	9	49
TMR_00124	tmRNA links to Rfam database...	0.59	0.59	0.60	58	70403	51	13	26	12	40
TMR_00125	tmRNA links to Rfam database...	0.28	0.26	0.31	26	64176	63	13	46	4	73
TMR_00127	tmRNA links to Rfam database...	0.61	0.62	0.61	60	62737	52	3	35	14	37
TMR_00128	tmRNA links to Rfam database...	0.34	0.34	0.33	33	60976	66	20	46	0	63
TMR_00131	tmRNA links to Rfam database...	0.56	0.53	0.60	52	64893	43	5	30	8	47
TMR_00135	tmRNA links to Rfam database...	0.65	0.65	0.65	64	62736	50	6	29	15	35
TMR_00136	tmRNA links to Rfam database...	0.20	0.22	0.19	22	74577	95	21	71	3	79
TMR_00137	tmRNA links to Rfam database...	0.37	0.34	0.41	30	61001	53	6	38	9	59
TMR_00139	tmRNA links to Rfam database...	0.63	0.67	0.59	61	62025	53	19	23	11	30
TMR_00140	tmRNA links to Rfam database...	0.55	0.55	0.56	55	73822	64	3	40	21	45
TMR_00142	tmRNA links to Rfam database...	0.57	0.58	0.56	59	70771	61	13	33	15	43
TMR_00143	tmRNA links to Rfam database...	0.45	0.46	0.45	47	64516	68	10	47	11	56
TMR_00144	tmRNA links to Rfam database...	0.40	0.37	0.43	38	74217	55	8	42	5	65
TMR_00146	tmRNA links to Rfam database...	0.85	0.90	0.79	38	32083	35	7	3	25	4
TMR_00150	tmRNA links to Rfam database...	0.72	0.71	0.73	30	43030	50	2	9	39	12
TMR_00152	tmRNA links to Rfam database...	0.33	0.31	0.36	36	81306	73	12	52	9	79
TMR_00155	tmRNA links to Rfam database...	0.62	0.60	0.64	62	61679	47	8	27	12	42
TMR_00156	tmRNA links to Rfam database...	0.61	0.59	0.64	57	60289	36	6	26	4	40
TMR_00158	tmRNA links to Rfam database...	0.51	0.51	0.51	50	60628	54	7	41	6	49
TMR_00159	tmRNA links to Rfam database...	0.62	0.60	0.65	55	62043	46	7	23	16	37
TMR_00160	tmRNA links to Rfam database...	0.50	0.49	0.51	47	64527	57	13	33	11	48
TMR_00164	tmRNA links to Rfam database...	0.42	0.40	0.45	42	66702	59	9	42	8	64
TMR_00165	tmRNA links to Rfam database...	0.48	0.46	0.49	45	61685	53	9	37	7	52
TMR_00166	tmRNA links to Rfam database...	0.39	0.38	0.41	38	61683	65	5	50	10	63
TMR_00168	tmRNA links to Rfam database...	0.72	0.68	0.76	78	60972	32	0	25	7	36
TMR_00173	tmRNA links to Rfam database...	0.32	0.36	0.29	15	42143	71	13	24	34	27
TMR_00179	tmRNA links to Rfam database...	0.44	0.46	0.43	45	67056	67	10	50	7	53
TMR_00180	tmRNA links to Rfam database...	0.72	0.72	0.72	71	67063	42	5	22	15	28
TMR_00182	tmRNA links to Rfam database...	0.22	0.22	0.22	22	66330	84	10	68	6	80
TMR_00183	tmRNA links to Rfam database...	0.25	0.24	0.25	25	63091	80	10	64	6	78
TMR_00184	tmRNA links to Rfam database...	0.41	0.41	0.41	42	63087	73	4	57	12	60
TMR_00193	tmRNA links to Rfam database...	0.56	0.55	0.56	44	59262	47	6	28	13	36
TMR_00194	tmRNA links to Rfam database...	0.51	0.46	0.56	43	62758	42	2	32	8	50
TMR_00196	tmRNA links to Rfam database...	0.45	0.42	0.48	41	60989	55	11	34	10	56
TMR_00199	tmRNA links to Rfam database...	0.57	0.59	0.56	54	62738	51	18	25	8	38
TMR_00200	-	0.41	0.40	0.42	30	41544	52	7	35	10	45
TMR_00204	tmRNA links to Rfam database...	0.56	0.53	0.61	51	60294	43	10	23	10	46
TMR_00207	tmRNA links to Rfam database...	0.43	0.40	0.48	41	72304	50	5	40	5	62
TMR_00223	tmRNA links to Rfam database...	0.40	0.38	0.43	36	64177	53	10	38	5	59
TMR_00224	tmRNA links to Rfam database...	0.49	0.45	0.55	45	64898	42	7	30	5	56
TMR_00226	tmRNA links to Rfam database...	0.36	0.36	0.36	38	69644	77	17	52	8	67
TMR_00227	tmRNA links to Rfam database...	0.38	0.39	0.37	39	70019	72	12	55	5	62
TMR_00228	tmRNA links to Rfam database...	0.32	0.34	0.30	37	88287	91	21	65	5	71
TMR_00234	tmRNA links to Rfam database...	0.36	0.32	0.40	33	58913	56	6	44	6	69
TMR_00238	tmRNA links to Rfam database...	0.31	0.33	0.29	33	84552	87	24	57	6	68
TMR_00239	tmRNA links to Rfam database...	0.50	0.51	0.50	49	61678	56	9	40	7	47
TMR_00240	tmRNA links to Rfam database...	0.60	0.61	0.60	52	63103	43	14	21	8	33
TMR_00246	-	0.26	0.29	0.22	10	78165	112	4	31	77	24
TMR_00248	tmRNA links to Rfam database...	0.42	0.39	0.45	15	54252	64	3	15	46	23
TMR_00257	tmRNA links to Rfam database...	0.25	0.22	0.27	22	67080	65	2	57	6	76
TMR_00259	tmRNA links to Rfam database...	0.38	0.35	0.41	36	67809	51	10	41	0	67
TMR_00261	tmRNA links to Rfam database...	0.58	0.60	0.55	61	66685	58	17	32	9	40
TMR_00262	tmRNA links to Rfam database...	0.46	0.46	0.46	48	74200	61	16	41	4	56
TMR_00271	tmRNA links to Rfam database...	0.64	0.62	0.67	56	64177	40	6	22	12	35
TMR_00274	tmRNA links to Rfam database...	0.60	0.59	0.60	62	66692	47	13	28	6	43
TMR_00278	tmRNA links to Rfam database...	0.42	0.43	0.42	44	67790	71	5	57	9	58
TMR_00279	tmRNA links to Rfam database...	0.53	0.54	0.52	51	68908	60	8	39	13	43
TMR_00280	tmRNA links to Rfam database...	0.60	0.62	0.58	63	65958	64	4	41	19	38
TMR_00283	tmRNA links to Rfam database...	0.65	0.63	0.67	60	65252	41	5	24	12	36
TMR_00289	tmRNA links to Rfam database...	0.53	0.52	0.54	51	67066	54	5	39	10	47
TMR_00290	tmRNA links to Rfam database...	0.61	0.59	0.64	54	64177	43	4	26	13	38
TMR_00296	tmRNA links to Rfam database...	0.49	0.50	0.48	49	68903	59	12	42	5	49
TMR_00298	tmRNA links to Rfam database...	0.54	0.51	0.56	52	68172	50	11	30	9	49
TMR_00300	tmRNA links to Rfam database...	0.63	0.63	0.63	71	70388	54	11	30	13	41
TMR_00301	tmRNA links to Rfam database...	0.58	0.51	0.66	49	82141	40	5	20	15	47
TMR_00302	tmRNA links to Rfam database...	0.33	0.35	0.31	33	77314	82	24	50	8	61
TMR_00305	tmRNA links to Rfam database...	0.59	0.57	0.62	58	60982	49	8	27	14	44
TMR_00306	tmRNA links to Rfam database...	0.67	0.68	0.67	72	64153	49	5	31	13	34
TMR_00310	tmRNA links to Rfam database...	0.56	0.55	0.58	54	63810	50	9	30	11	44
TMR_00317	tmRNA links to Rfam database...	0.68	0.68	0.68	69	68164	38	6	26	6	33
TMR_00331	tmRNA links to Rfam database...	0.37	0.40	0.34	33	66697	80	10	55	15	49
TMR_00332	tmRNA links to Rfam database...	0.45	0.40	0.50	40	67081	45	2	38	5	59
TMR_00334	tmRNA links to Rfam database...	0.38	0.37	0.40	37	66703	62	9	46	7	64
TMR_00337	tmRNA links to Rfam database...	0.48	0.45	0.50	54	82921	57	11	42	4	65
TMR_00340	tmRNA links to Rfam database...	0.51	0.52	0.51	42	64179	66	8	32	26	39
TMR_00341	tmRNA links to Rfam database...	0.27	0.28	0.26	26	63091	81	16	57	8	66
TMR_00343	tmRNA links to Rfam database...	0.37	0.35	0.39	37	64884	68	6	53	9	68
TMR_00345	tmRNA links to Rfam database...	0.70	0.68	0.72	71	63805	37	7	20	10	33
TMR_00346	tmRNA links to Rfam database...	0.53	0.53	0.54	50	64168	47	13	30	4	44
TMR_00348	tmRNA links to Rfam database...	0.32	0.29	0.35	29	77337	72	13	42	17	70
TMR_00352	tmRNA links to Rfam database...	0.14	0.16	0.12	12	95167	98	32	55	11	63
TMR_00353	tmRNA links to Rfam database...	0.52	0.55	0.50	58	84139	70	21	37	12	47
TMR_00357	tmRNA links to Rfam database...	0.37	0.35	0.39	32	82946	70	10	40	20	60
TMR_00358	tmRNA links to Rfam database...	0.68	0.69	0.67	68	74976	55	15	19	21	31
TMR_00361	-	0.35	0.40	0.30	29	93432	80	24	43	13	43
TMR_00366	tmRNA links to Rfam database...	0.52	0.50	0.53	50	67802	55	12	32	11	50
TMR_00372	tmRNA links to Rfam database...	0.59	0.59	0.59	57	70404	52	7	32	13	39
TMR_00374	tmRNA links to Rfam database...	0.35	0.36	0.35	33	81715	80	11	51	18	59
TMR_00375	tmRNA links to Rfam database...	0.51	0.53	0.49	52	73429	63	14	41	8	46
TMR_00376	tmRNA links to Rfam database...	0.51	0.49	0.52	47	74601	60	9	34	17	48
TMR_00378	tmRNA links to Rfam database...	0.24	0.25	0.24	24	67797	86	17	58	11	73
TMR_00383	tmRNA links to Rfam database...	0.44	0.40	0.49	40	66714	50	11	30	9	60
TMR_00384	tmRNA links to Rfam database...	0.20	0.19	0.22	20	65614	74	4	65	5	88
TMR_00393	tmRNA links to Rfam database...	0.58	0.62	0.54	33	53240	62	9	19	34	20
TMR_00395	tmRNA links to Rfam database...	0.75	0.72	0.78	78	64520	30	5	17	8	31
TMR_00398	tmRNA links to Rfam database...	0.72	0.70	0.75	74	65242	34	8	17	9	32
TMR_00399	tmRNA links to Rfam database...	0.44	0.43	0.47	40	64894	52	16	30	6	54
TMR_00404	tmRNA links to Rfam database...	0.56	0.58	0.55	53	67431	62	11	33	18	39
TMR_00408	tmRNA links to Rfam database...	0.58	0.61	0.55	54	65968	57	14	30	13	34
TMR_00409	tmRNA links to Rfam database...	0.64	0.76	0.55	35	68571	80	10	19	51	11
TMR_00411	tmRNA links to Rfam database...	0.61	0.60	0.62	52	60991	44	9	23	12	35
TMR_00415	tmRNA links to Rfam database...	0.64	0.62	0.66	63	67066	36	3	29	4	38
TMR_00419	tmRNA links to Rfam database...	0.63	0.61	0.65	68	81706	55	12	24	19	43
TMR_00422	tmRNA links to Rfam database...	0.53	0.58	0.48	53	67786	75	17	40	18	39
TMR_00423	tmRNA links to Rfam database...	0.52	0.56	0.48	41	63817	64	16	29	19	32
TMR_00427	tmRNA links to Rfam database...	0.45	0.42	0.48	41	67443	49	10	34	5	56
TMR_00429	tmRNA links to Rfam database...	0.38	0.38	0.38	41	74583	72	15	52	5	68
TMR_00430	tmRNA links to Rfam database...	0.18	0.18	0.17	20	82505	96	25	71	0	89
TMR_00431	tmRNA links to Rfam database...	0.70	0.69	0.72	38	51950	55	6	9	40	17
TMR_00432	tmRNA links to Rfam database...	0.46	0.45	0.46	47	79698	63	11	44	8	57
TMR_00433	tmRNA links to Rfam database...	0.59	0.59	0.58	63	80092	51	11	34	6	43
TMR_00439	tmRNA links to Rfam database...	0.45	0.47	0.43	47	68525	75	15	48	12	54
TMR_00441	tmRNA links to Rfam database...	0.14	0.16	0.13	13	62031	95	20	64	11	70
TMR_00443	tmRNA links to Rfam database...	0.57	0.51	0.65	53	67079	36	6	23	7	51
TMR_00448	tmRNA links to Rfam database...	0.47	0.45	0.49	41	62045	50	7	35	8	51
TMR_00451	tmRNA links to Rfam database...	0.19	0.19	0.18	17	63453	80	18	58	4	72
TMR_00457	tmRNA links to Rfam database...	0.22	0.24	0.21	24	78491	96	11	80	5	78
TMR_00458	tmRNA links to Rfam database...	0.32	0.30	0.35	28	63465	60	11	42	7	65
TMR_00460	tmRNA links to Rfam database...	0.65	0.64	0.67	68	79299	42	6	28	8	38
TMR_00465	tmRNA links to Rfam database...	0.27	0.28	0.26	26	64160	79	23	52	4	68
TMR_00469	tmRNA links to Rfam database...	0.53	0.53	0.53	53	64520	51	13	34	4	47
TMR_00472	tmRNA links to Rfam database...	0.64	0.64	0.64	62	64523	43	12	23	8	35
TMR_00478	tmRNA links to Rfam database...	0.24	0.26	0.22	26	71894	94	21	69	4	73
TMR_00498	tmRNA links to Rfam database...	0.46	0.45	0.46	45	68909	60	20	32	8	54
TMR_00499	tmRNA links to Rfam database...	0.27	0.28	0.25	28	64510	88	10	72	6	71
TMR_00501	tmRNA links to Rfam database...	0.45	0.46	0.45	42	62387	61	9	43	9	50
TMR_00502	tmRNA links to Rfam database...	0.37	0.39	0.35	36	75364	77	19	47	11	57
TMR_00503	tmRNA links to Rfam database...	0.70	0.68	0.73	75	67793	38	6	22	10	36
TMR_00519	tmRNA links to Rfam database...	0.33	0.32	0.35	30	63105	69	8	47	14	65
TMR_00520	tmRNA links to Rfam database...	0.44	0.41	0.48	41	63104	56	9	36	11	58
TMR_00522	tmRNA links to Rfam database...	0.36	0.35	0.38	34	63100	65	12	44	9	63
TMR_00528	tmRNA links to Rfam database...	0.36	0.36	0.35	35	63091	75	20	44	11	62
TMR_00540	tmRNA links to Rfam database...	0.35	0.35	0.36	36	73436	76	10	54	12	68
TMR_00541	tmRNA links to Rfam database...	0.56	0.55	0.57	58	61674	54	6	38	10	47
TMR_00544	tmRNA links to Rfam database...	0.36	0.36	0.36	39	89567	82	13	57	12	69
TMR_00547	tmRNA links to Rfam database...	0.68	0.66	0.70	66	65247	33	0	28	5	34
TMR_00553	tmRNA links to Rfam database...	0.45	0.44	0.45	36	48125	50	9	35	6	45
TMR_00559	tmRNA links to Rfam database...	0.52	0.50	0.53	51	62385	53	7	38	8	50
TMR_00560	tmRNA links to Rfam database...	0.61	0.54	0.68	53	60997	30	2	23	5	45
TMR_00562	tmRNA links to Rfam database...	0.16	0.18	0.15	18	72652	102	19	82	1	84
TMR_00563	tmRNA links to Rfam database...	0.62	0.65	0.59	67	75352	55	19	28	8	36
TMR_00566	tmRNA links to Rfam database...	0.58	0.54	0.62	54	60639	38	6	27	5	46
TMR_00568	tmRNA links to Rfam database...	0.51	0.51	0.53	50	60631	51	6	39	6	49
TMR_00570	tmRNA links to Rfam database...	0.69	0.64	0.75	62	60295	30	2	19	9	35
TMR_00571	tmRNA links to Rfam database...	0.65	0.64	0.66	63	60631	44	7	25	12	36
TMR_00576	tmRNA links to Rfam database...	0.65	0.65	0.65	66	60277	44	8	27	9	36
TMR_00579	tmRNA links to Rfam database...	0.21	0.23	0.19	21	80490	99	23	67	9	69
TMR_00580	tmRNA links to Rfam database...	0.41	0.41	0.41	41	60625	63	15	45	3	59
TMR_00581	tmRNA links to Rfam database...	0.45	0.42	0.48	41	62396	49	9	35	5	57
TMR_00584	tmRNA links to Rfam database...	0.63	0.61	0.65	59	60984	45	3	29	13	38
TMR_00586	tmRNA links to Rfam database...	0.41	0.41	0.41	40	60977	63	11	47	5	57
TMR_00587	tmRNA links to Rfam database...	0.58	0.57	0.59	57	61329	48	6	33	9	43
TMR_00588	tmRNA links to Rfam database...	0.39	0.40	0.38	40	77315	71	23	43	5	61
TMR_00594	tmRNA links to Rfam database...	0.36	0.36	0.37	37	79300	70	12	52	6	67
TMR_00596	tmRNA links to Rfam database...	0.34	0.34	0.34	32	78115	78	16	47	15	63
TMR_00599	tmRNA links to Rfam database...	0.25	0.28	0.23	20	63102	75	25	43	7	52
TMR_00600	tmRNA links to Rfam database...	0.50	0.50	0.51	57	79688	61	10	45	6	58
TMR_00601	tmRNA links to Rfam database...	0.32	0.31	0.34	13	58958	72	5	20	47	29
TMR_00603	tmRNA links to Rfam database...	0.67	0.70	0.64	30	60331	69	6	11	52	13
TMR_00604	tmRNA links to Rfam database...	0.65	0.64	0.67	72	62727	41	3	33	5	40
TMR_00605	tmRNA links to Rfam database...	0.52	0.53	0.52	57	74195	60	16	37	7	51
TMR_00606	tmRNA links to Rfam database...	0.39	0.40	0.37	43	68891	79	8	64	7	64
TMR_00609	tmRNA links to Rfam database...	0.69	0.68	0.70	77	63436	41	8	25	8	36
TMR_00610	tmRNA links to Rfam database...	0.70	0.70	0.70	73	62023	47	9	23	15	31
TMR_00611	tmRNA links to Rfam database...	0.61	0.65	0.58	66	61311	48	13	35	0	36
TMR_00612	tmRNA links to Rfam database...	0.45	0.46	0.44	48	60616	67	8	54	5	56
TMR_00614	tmRNA links to Rfam database...	0.72	0.69	0.76	72	60980	34	3	20	11	32
TMR_00615	tmRNA links to Rfam database...	0.67	0.69	0.65	66	63802	46	14	21	11	30
TMR_00616	tmRNA links to Rfam database...	0.42	0.41	0.42	41	67063	65	12	45	8	58
TMR_00617	tmRNA links to Rfam database...	0.29	0.34	0.25	20	34635	70	17	44	9	38
TMR_00623	tmRNA links to Rfam database...	0.52	0.51	0.54	55	61323	53	2	45	6	53
TMR_00624	tmRNA links to Rfam database...	0.80	0.75	0.84	81	62385	30	4	11	15	27
TMR_00625	tmRNA links to Rfam database...	0.29	0.30	0.28	32	78887	87	22	62	3	74
TMR_00626	tmRNA links to Rfam database...	0.52	0.50	0.54	55	67794	52	8	39	5	54
TMR_00680	tmRNA links to Rfam database...	0.25	0.26	0.24	26	67789	89	15	66	8	73
TMR_00681	tmRNA links to Rfam database...	0.57	0.57	0.58	55	65971	52	4	36	12	42
TMR_00683	tmRNA links to Rfam database...	0.25	0.26	0.23	26	82917	95	19	66	10	74
TMR_00686	tmRNA links to Rfam database...	0.51	0.46	0.57	50	71165	50	9	29	12	58
TMR_00687	tmRNA links to Rfam database...	0.34	0.36	0.33	40	71510	83	12	69	2	71
TMR_00696	tmRNA links to Rfam database...	0.27	0.25	0.29	29	84977	86	12	60	14	85
TMR_00698	tmRNA links to Rfam database...	0.34	0.35	0.33	36	63081	73	18	55	0	68
TMR_00699	tmRNA links to Rfam database...	0.67	0.62	0.72	63	67074	29	4	20	5	39
TMR_00702	tmRNA links to Rfam database...	0.36	0.32	0.40	32	67081	57	5	43	9	68
TMR_00703	tmRNA links to Rfam database...	0.59	0.56	0.62	55	67439	43	6	28	9	44
TMR_00706	tmRNA links to Rfam database...	0.62	0.58	0.67	60	66340	34	6	24	4	43
TMR_00711	tmRNA links to Rfam database...	0.56	0.58	0.54	57	67791	56	16	32	8	41
TMR_00712	tmRNA links to Rfam database...	0.31	0.32	0.31	35	78493	90	17	61	12	74
TMR_00716	tmRNA links to Rfam database...	0.24	0.24	0.25	24	62738	78	10	63	5	76

^top

Performance of Vsfold4 - scored lower in this pairwise comparison

1. Total counts & total scores for Vsfold4

Total Base Pair Counts
Total TP	16789
Total TN	33991615
Total FP	32009
Total FP CONTRA	3959
Total FP INCONS	25189
Total FP COMP	2861
Total FN	37637

Total Scores
MCC	0.335
Average MCC ± 95% Confidence Intervals	0.333 ± 0.012
Sensitivity	0.308
Positive Predictive Value	0.365
Nr of predictions	547

^top

2. Individual counts for Vsfold4 [ download as .csv ]

RNA Chain	Rfam family	MCC	SENS	PPV	TP	TN	FP	FP CONTRA	FP INCONS	FP COMP	FN
ASE_00001	RNaseP_arch links to Rfam database...	0.52	0.45	0.60	34	34134	27	5	18	4	41
ASE_00002	RNaseP_arch links to Rfam database...	0.33	0.30	0.37	22	35451	38	2	36	0	51
ASE_00004	RNaseP_bact_a links to Rfam database...	0.66	0.59	0.74	57	47818	20	1	19	0	40
ASE_00005	RNaseP_bact_a links to Rfam database...	0.31	0.26	0.36	31	57883	60	1	55	4	86
ASE_00006	RNaseP_bact_a links to Rfam database...	0.40	0.37	0.45	34	47510	43	0	42	1	59
ASE_00007	RNaseP_bact_a links to Rfam database...	0.36	0.33	0.40	36	59596	57	1	52	4	74
ASE_00009	RNaseP_arch links to Rfam database...	0.20	0.18	0.22	12	26051	43	3	40	0	55
ASE_00012	RNaseP_bact_a links to Rfam database...	0.34	0.30	0.39	37	73826	62	2	55	5	86
ASE_00014	RNaseP_arch links to Rfam database...	0.38	0.36	0.41	38	54192	56	7	48	1	68
ASE_00017	RNaseP_nuc links to Rfam database...	0.16	0.16	0.16	10	50976	69	14	40	15	54
ASE_00018	RNaseP_bact_a links to Rfam database...	0.48	0.43	0.54	57	80496	48	2	46	0	77
ASE_00020	RNaseP_bact_a links to Rfam database...	0.41	0.36	0.48	45	73827	48	1	47	0	81
ASE_00022	RNaseP_bact_b links to Rfam database...	0.48	0.41	0.57	51	82938	42	5	34	3	73
ASE_00023	RNaseP_bact_a links to Rfam database...	0.41	0.39	0.43	49	84141	67	5	60	2	78
ASE_00025	RNaseP_nuc links to Rfam database...	0.30	0.28	0.31	20	78542	82	17	27	38	51
ASE_00026	RNaseP_bact_a links to Rfam database...	0.43	0.37	0.49	41	59601	43	11	32	0	69
ASE_00028	RNaseP_bact_b links to Rfam database...	0.34	0.30	0.38	38	84565	63	6	57	0	88
ASE_00029	RNaseP_bact_a links to Rfam database...	0.29	0.26	0.33	32	82932	64	7	57	0	90
ASE_00030	RNaseP_bact_a links to Rfam database...	0.53	0.46	0.61	66	85383	42	5	37	0	79
ASE_00031	RNaseP_bact_a links to Rfam database...	0.50	0.45	0.56	57	86635	46	1	43	2	69
ASE_00032	RNaseP_bact_a links to Rfam database...	0.43	0.39	0.47	46	80103	52	5	46	1	72
ASE_00033	RNaseP_bact_a links to Rfam database...	0.39	0.34	0.44	41	64887	53	1	51	1	80
ASE_00035	RNaseP_bact_a links to Rfam database...	0.26	0.24	0.29	28	70403	69	3	66	0	90
ASE_00036	RNaseP_bact_a links to Rfam database...	0.37	0.33	0.42	44	75751	61	6	54	1	88
ASE_00037	RNaseP_bact_a links to Rfam database...	0.31	0.26	0.37	29	59262	51	0	49	2	81
ASE_00038	RNaseP_bact_a links to Rfam database...	0.47	0.44	0.51	44	53541	45	0	43	2	57
ASE_00040	RNaseP_bact_a links to Rfam database...	0.42	0.37	0.49	49	78903	51	1	50	0	84
ASE_00041	RNaseP_bact_a links to Rfam database...	0.29	0.25	0.34	27	57551	52	8	44	0	81
ASE_00042	RNaseP_bact_a links to Rfam database...	0.44	0.38	0.51	55	89992	56	2	51	3	90
ASE_00044	RNaseP_bact_a links to Rfam database...	0.54	0.52	0.57	55	54518	46	3	39	4	50
ASE_00046	RNaseP_bact_a links to Rfam database...	0.32	0.26	0.39	27	50334	43	3	39	1	76
ASE_00047	RNaseP_bact_a links to Rfam database...	0.27	0.23	0.31	30	74208	67	2	65	0	100
ASE_00052	RNaseP_bact_a links to Rfam database...	0.35	0.30	0.41	34	61343	49	7	41	1	78
ASE_00053	RNaseP_bact_a links to Rfam database...	0.54	0.47	0.63	62	79303	37	7	29	1	71
ASE_00056	-	0.29	0.26	0.32	19	30817	42	4	36	2	53
ASE_00057	RNaseP_bact_a links to Rfam database...	0.50	0.45	0.57	60	82109	48	7	39	2	74
ASE_00064	RNaseP_bact_a links to Rfam database...	0.47	0.42	0.54	37	45382	38	0	32	6	52
ASE_00066	RNaseP_bact_a links to Rfam database...	0.49	0.42	0.56	55	72292	44	0	43	1	75
ASE_00068	RNaseP_bact_a links to Rfam database...	0.35	0.29	0.41	25	37614	39	1	35	3	60
ASE_00069	RNaseP_bact_a links to Rfam database...	0.44	0.37	0.53	52	82930	47	7	39	1	88
ASE_00074	RNaseP_bact_a links to Rfam database...	0.43	0.39	0.47	47	67797	52	2	50	0	72
ASE_00076	RNaseP_bact_a links to Rfam database...	0.35	0.32	0.39	38	68168	59	6	53	0	80
ASE_00077	RNaseP_bact_a links to Rfam database...	0.27	0.26	0.30	22	45076	56	5	47	4	64
ASE_00078	RNaseP_bact_a links to Rfam database...	0.32	0.30	0.35	25	42999	52	3	44	5	58
ASE_00079	RNaseP_bact_a links to Rfam database...	0.42	0.39	0.46	39	55526	46	4	42	0	61
ASE_00080	RNaseP_bact_a links to Rfam database...	0.37	0.32	0.43	39	71540	52	2	50	0	84
ASE_00081	RNaseP_bact_a links to Rfam database...	0.39	0.35	0.45	34	49694	42	3	39	0	63
ASE_00082	RNaseP_bact_a links to Rfam database...	0.39	0.34	0.44	39	70412	57	1	48	8	77
ASE_00083	RNaseP_bact_a links to Rfam database...	0.55	0.50	0.60	55	62389	41	5	32	4	55
ASE_00084	RNaseP_bact_a links to Rfam database...	0.51	0.44	0.59	44	53554	35	3	27	5	55
ASE_00087	RNaseP_bact_a links to Rfam database...	0.42	0.35	0.52	50	88313	51	2	45	4	94
ASE_00089	-	0.38	0.33	0.45	26	31317	33	1	31	1	53
ASE_00090	RNaseP_bact_a links to Rfam database...	0.48	0.46	0.51	46	55521	46	4	40	2	55
ASE_00092	RNaseP_bact_a links to Rfam database...	0.51	0.46	0.58	52	63456	38	10	28	0	61
ASE_00096	RNaseP_bact_a links to Rfam database...	0.56	0.50	0.62	58	63453	35	0	35	0	57
ASE_00099	RNaseP_bact_a links to Rfam database...	0.58	0.53	0.63	64	64518	39	5	33	1	56
ASE_00100	RNaseP_nuc links to Rfam database...	0.34	0.32	0.38	24	82151	96	4	36	56	52
ASE_00104	RNaseP_bact_a links to Rfam database...	0.51	0.45	0.57	54	64167	40	3	37	0	65
ASE_00105	RNaseP_bact_a links to Rfam database...	0.32	0.29	0.37	32	64174	57	6	49	2	79
ASE_00107	RNaseP_bact_a links to Rfam database...	0.41	0.36	0.46	46	73053	54	2	52	0	81
ASE_00108	RNaseP_nuc links to Rfam database...	0.25	0.25	0.25	16	46908	69	10	37	22	47
ASE_00111	RNaseP_nuc links to Rfam database...	0.17	0.19	0.15	11	50013	75	25	37	13	46
ASE_00112	RNaseP_bact_a links to Rfam database...	0.49	0.43	0.56	50	75376	41	4	36	1	66
ASE_00115	RNaseP_bact_a links to Rfam database...	0.43	0.39	0.49	39	54535	48	6	35	7	62
ASE_00116	RNaseP_arch links to Rfam database...	0.17	0.15	0.19	10	31573	43	2	41	0	56
ASE_00118	RNaseP_bact_a links to Rfam database...	0.37	0.35	0.40	36	60636	54	4	50	0	66
ASE_00119	RNaseP_bact_a links to Rfam database...	0.72	0.63	0.82	68	62752	20	1	14	5	40
ASE_00120	RNaseP_arch links to Rfam database...	0.35	0.31	0.39	29	46897	45	3	42	0	65
ASE_00121	RNaseP_arch links to Rfam database...	0.20	0.17	0.22	16	45078	58	4	52	2	76
ASE_00122	RNaseP_bact_a links to Rfam database...	0.49	0.42	0.58	37	43301	28	1	26	1	51
ASE_00123	RNaseP_bact_a links to Rfam database...	0.33	0.29	0.38	25	38437	45	0	41	4	60
ASE_00125	RNaseP_bact_a links to Rfam database...	0.41	0.38	0.45	33	39267	40	2	38	0	55
ASE_00126	RNaseP_bact_a links to Rfam database...	0.52	0.46	0.58	38	40405	33	0	27	6	44
ASE_00128	RNaseP_bact_a links to Rfam database...	0.47	0.41	0.53	41	53224	39	4	32	3	59
ASE_00129	RNaseP_bact_a links to Rfam database...	0.55	0.49	0.61	54	62747	34	5	29	0	57
ASE_00131	RNaseP_bact_a links to Rfam database...	0.53	0.46	0.61	39	39276	30	4	21	5	46
ASE_00132	RNaseP_bact_a links to Rfam database...	0.55	0.49	0.60	47	50325	33	4	27	2	48
ASE_00134	RNaseP_bact_a links to Rfam database...	0.46	0.41	0.51	39	50326	42	5	33	4	56
ASE_00135	RNaseP_bact_a links to Rfam database...	0.38	0.35	0.42	38	63100	57	8	44	5	71
ASE_00136	RNaseP_bact_a links to Rfam database...	0.52	0.47	0.59	43	48132	39	1	29	9	49
ASE_00137	RNaseP_bact_a links to Rfam database...	0.52	0.48	0.56	47	48432	37	0	37	0	51
ASE_00138	RNaseP_bact_a links to Rfam database...	0.42	0.38	0.47	31	40404	37	5	30	2	50
ASE_00139	RNaseP_bact_a links to Rfam database...	0.57	0.49	0.66	51	54208	29	1	25	3	53
ASE_00140	RNaseP_bact_a links to Rfam database...	0.42	0.37	0.48	46	70780	50	4	46	0	79
ASE_00142	RNaseP_bact_a links to Rfam database...	0.50	0.44	0.57	54	67066	41	6	35	0	68
ASE_00145	RNaseP_arch links to Rfam database...	0.25	0.23	0.27	25	70033	69	3	64	2	86
ASE_00146	RNaseP_bact_a links to Rfam database...	0.30	0.26	0.35	32	70784	61	2	58	1	92
ASE_00151	RNaseP_bact_a links to Rfam database...	0.43	0.39	0.47	38	51922	43	11	32	0	60
ASE_00153	RNaseP_nuc links to Rfam database...	0.38	0.37	0.39	27	57561	65	9	33	23	46
ASE_00154	RNaseP_arch links to Rfam database...	0.34	0.30	0.40	32	65260	50	5	44	1	75
ASE_00155	RNaseP_arch links to Rfam database...	0.31	0.27	0.36	39	93419	73	2	68	3	103
ASE_00163	RNaseP_bact_a links to Rfam database...	0.36	0.32	0.39	30	53225	50	8	38	4	63
ASE_00165	RNaseP_bact_a links to Rfam database...	0.43	0.40	0.46	40	52888	48	6	41	1	61
ASE_00168	RNaseP_nuc links to Rfam database...	0.31	0.34	0.29	22	60650	75	19	35	21	42
ASE_00169	RNaseP_bact_a links to Rfam database...	0.54	0.47	0.63	50	57211	31	2	28	1	57
ASE_00170	RNaseP_bact_a links to Rfam database...	0.47	0.44	0.50	41	48746	41	4	37	0	52
ASE_00171	RNaseP_bact_a links to Rfam database...	0.39	0.33	0.46	31	48449	40	2	34	4	63
ASE_00172	RNaseP_bact_a links to Rfam database...	0.44	0.39	0.51	41	58916	40	5	34	1	65
ASE_00174	RNaseP_bact_a links to Rfam database...	0.42	0.38	0.47	41	60988	46	2	44	0	68
ASE_00175	RNaseP_bact_a links to Rfam database...	0.41	0.37	0.46	40	59944	48	0	47	1	67
ASE_00176	RNaseP_bact_a links to Rfam database...	0.56	0.52	0.61	57	59937	38	0	37	1	53
ASE_00179	RNaseP_bact_a links to Rfam database...	0.57	0.51	0.63	43	44185	25	5	20	0	41
ASE_00180	RNaseP_bact_a links to Rfam database...	0.38	0.36	0.41	36	51273	52	4	47	1	64
ASE_00181	RNaseP_bact_a links to Rfam database...	0.49	0.45	0.52	48	57538	48	2	42	4	58
ASE_00182	RNaseP_bact_a links to Rfam database...	0.41	0.35	0.48	47	84158	50	6	44	0	89
ASE_00183	RNaseP_bact_a links to Rfam database...	0.44	0.38	0.50	43	61339	48	1	42	5	70
ASE_00184	RNaseP_bact_a links to Rfam database...	0.50	0.45	0.56	46	54533	41	1	35	5	56
ASE_00185	RNaseP_bact_a links to Rfam database...	0.39	0.32	0.47	41	73448	49	2	45	2	87
ASE_00186	RNaseP_bact_a links to Rfam database...	0.34	0.30	0.38	40	78899	66	3	61	2	92
ASE_00187	RNaseP_arch links to Rfam database...	0.25	0.23	0.28	26	68543	67	7	59	1	89
ASE_00189	RNaseP_bact_b links to Rfam database...	0.28	0.25	0.31	26	63107	57	4	53	0	76
ASE_00190	RNaseP_bact_b links to Rfam database...	0.42	0.37	0.49	33	45383	38	7	28	3	57
ASE_00192	RNaseP_bact_b links to Rfam database...	0.26	0.23	0.30	30	84565	77	7	64	6	103
ASE_00194	RNaseP_bact_b links to Rfam database...	0.45	0.40	0.51	48	73442	50	9	37	4	71
ASE_00195	-	0.29	0.27	0.32	36	86208	77	4	72	1	97
ASE_00196	RNaseP_arch links to Rfam database...	0.17	0.15	0.19	11	31569	47	4	42	1	64
ASE_00197	RNaseP_bact_a links to Rfam database...	0.38	0.33	0.44	48	89143	64	2	60	2	97
ASE_00198	RNaseP_bact_a links to Rfam database...	0.50	0.44	0.56	45	52570	40	0	35	5	57
ASE_00203	RNaseP_bact_a links to Rfam database...	0.48	0.44	0.52	42	46584	39	0	39	0	54
ASE_00204	RNaseP_bact_b links to Rfam database...	0.38	0.32	0.45	36	67816	48	12	32	4	76
ASE_00205	RNaseP_arch links to Rfam database...	0.19	0.18	0.20	16	45976	65	6	58	1	74
ASE_00209	RNaseP_arch links to Rfam database...	0.29	0.25	0.33	22	43004	45	2	43	0	66
ASE_00210	RNaseP_arch links to Rfam database...	0.10	0.09	0.11	6	27207	50	7	41	2	59
ASE_00212	RNaseP_bact_a links to Rfam database...	0.33	0.29	0.39	43	93850	70	5	63	2	105
ASE_00213	RNaseP_arch links to Rfam database...	0.32	0.30	0.34	20	27203	40	10	28	2	46
ASE_00214	RNaseP_bact_a links to Rfam database...	0.63	0.57	0.69	59	56194	32	2	25	5	44
ASE_00215	RNaseP_bact_a links to Rfam database...	0.47	0.41	0.53	41	48438	38	7	30	1	58
ASE_00216	RNaseP_bact_a links to Rfam database...	0.58	0.54	0.63	44	39270	27	0	26	1	38
ASE_00217	RNaseP_bact_a links to Rfam database...	0.24	0.21	0.28	19	40402	50	4	45	1	71
ASE_00221	RNaseP_bact_a links to Rfam database...	0.38	0.32	0.44	38	64533	49	3	46	0	79
ASE_00227	RNaseP_bact_a links to Rfam database...	0.38	0.33	0.44	44	78904	55	3	52	0	89
ASE_00228	RNaseP_bact_a links to Rfam database...	0.35	0.33	0.37	28	46896	49	13	34	2	58
ASE_00229	RNaseP_bact_a links to Rfam database...	0.58	0.52	0.64	45	42416	27	1	24	2	42
ASE_00231	RNaseP_bact_a links to Rfam database...	0.66	0.63	0.71	60	47810	25	8	17	0	36
ASE_00232	RNaseP_bact_a links to Rfam database...	0.47	0.44	0.50	37	38429	37	6	31	0	47
ASE_00234	RNaseP_bact_a links to Rfam database...	0.32	0.26	0.40	33	75384	49	2	47	0	96
ASE_00237	RNaseP_nuc links to Rfam database...	0.33	0.38	0.30	21	45683	62	15	34	13	35
ASE_00238	RNaseP_bact_a links to Rfam database...	0.34	0.31	0.39	35	64171	55	3	52	0	79
ASE_00240	RNaseP_bact_a links to Rfam database...	0.29	0.26	0.33	24	46593	49	2	46	1	69
ASE_00241	RNaseP_bact_a links to Rfam database...	0.35	0.31	0.40	27	43889	44	8	32	4	60
ASE_00242	RNaseP_bact_a links to Rfam database...	0.47	0.43	0.53	48	60984	43	4	39	0	64
ASE_00246	RNaseP_nuc links to Rfam database...	0.28	0.27	0.29	18	48142	61	11	34	16	49
ASE_00247	RNaseP_nuc links to Rfam database...	0.35	0.34	0.35	22	54222	70	14	27	29	42
ASE_00248	RNaseP_bact_a links to Rfam database...	0.41	0.36	0.48	41	62395	48	1	44	3	73
ASE_00250	RNaseP_bact_a links to Rfam database...	0.47	0.43	0.53	56	78897	53	6	44	3	75
ASE_00254	RNaseP_bact_a links to Rfam database...	0.34	0.30	0.38	25	36790	46	4	37	5	57
ASE_00255	RNaseP_bact_a links to Rfam database...	0.33	0.29	0.38	38	74591	62	9	53	0	92
ASE_00257	RNaseP_bact_a links to Rfam database...	0.54	0.47	0.62	46	50966	28	2	26	0	51
ASE_00259	RNaseP_bact_a links to Rfam database...	0.37	0.33	0.41	40	73056	58	7	50	1	81
ASE_00263	RNaseP_bact_a links to Rfam database...	0.37	0.33	0.40	40	70401	59	6	53	0	80
ASE_00264	RNaseP_nuc links to Rfam database...	0.26	0.25	0.28	25	49051	68	2	63	3	75
ASE_00267	RNaseP_bact_a links to Rfam database...	0.38	0.34	0.43	30	45081	47	3	36	8	58
ASE_00270	RNaseP_bact_a links to Rfam database...	0.39	0.36	0.43	46	72283	61	4	57	0	82
ASE_00274	RNaseP_bact_a links to Rfam database...	0.38	0.34	0.42	35	55527	49	4	45	0	68
ASE_00277	RNaseP_bact_a links to Rfam database...	0.31	0.29	0.33	26	48127	52	8	44	0	65
ASE_00279	RNaseP_bact_a links to Rfam database...	0.26	0.23	0.31	23	53226	53	4	48	1	78
ASE_00280	RNaseP_bact_a links to Rfam database...	0.60	0.55	0.65	54	51920	29	1	28	0	44
ASE_00281	RNaseP_bact_a links to Rfam database...	0.60	0.51	0.71	45	44488	23	0	18	5	43
ASE_00282	RNaseP_bact_a links to Rfam database...	0.40	0.35	0.46	45	77717	53	6	47	0	82
ASE_00283	RNaseP_bact_a links to Rfam database...	0.41	0.36	0.48	38	61697	41	3	38	0	69
ASE_00284	RNaseP_bact_a links to Rfam database...	0.20	0.18	0.22	19	58225	67	1	66	0	89
ASE_00285	RNaseP_bact_a links to Rfam database...	0.49	0.43	0.56	52	68913	41	1	40	0	70
ASE_00286	RNaseP_bact_a links to Rfam database...	0.45	0.40	0.51	37	46592	40	4	32	4	55
ASE_00287	RNaseP_bact_a links to Rfam database...	0.40	0.34	0.47	35	54872	41	0	39	2	68
ASE_00288	RNaseP_bact_a links to Rfam database...	0.52	0.47	0.57	44	45979	33	6	27	0	49
ASE_00291	-	0.39	0.34	0.45	32	48445	44	1	38	5	62
ASE_00292	RNaseP_bact_a links to Rfam database...	0.48	0.41	0.56	56	81710	46	2	42	2	82
ASE_00295	RNaseP_bact_a links to Rfam database...	0.40	0.35	0.46	46	73821	55	1	52	2	85
ASE_00296	RNaseP_bact_a links to Rfam database...	0.43	0.38	0.48	55	91692	59	2	57	0	90
ASE_00297	RNaseP_bact_a links to Rfam database...	0.50	0.47	0.53	46	52889	40	3	37	0	52
ASE_00298	RNaseP_bact_a links to Rfam database...	0.38	0.33	0.44	37	67443	51	0	48	3	76
ASE_00299	RNaseP_bact_a links to Rfam database...	0.28	0.26	0.30	26	49368	61	8	53	0	74
ASE_00313	RNaseP_nuc links to Rfam database...	0.35	0.33	0.37	29	62403	66	11	38	17	60
ASE_00318	RNaseP_bact_b links to Rfam database...	0.38	0.35	0.41	41	80101	61	5	53	3	77
ASE_00327	RNaseP_nuc links to Rfam database...	0.36	0.34	0.39	30	57215	57	4	42	11	59
ASE_00328	RNaseP_bact_b links to Rfam database...	0.43	0.39	0.48	44	72679	54	4	44	6	68
ASE_00330	RNaseP_nuc links to Rfam database...	0.30	0.28	0.33	25	56204	62	4	47	11	65
ASE_00332	RNaseP_bact_a links to Rfam database...	0.43	0.39	0.48	54	81698	59	2	56	1	84
ASE_00335	RNaseP_bact_b links to Rfam database...	0.35	0.32	0.39	37	75372	61	4	53	4	79
ASE_00337	RNaseP_nuc links to Rfam database...	0.47	0.48	0.47	34	39268	45	7	31	7	37
ASE_00338	RNaseP_nuc links to Rfam database...	0.28	0.27	0.31	26	66345	73	12	47	14	72
ASE_00339	RNaseP_bact_a links to Rfam database...	0.38	0.34	0.42	41	80103	57	7	49	1	78
ASE_00340	RNaseP_bact_a links to Rfam database...	0.43	0.38	0.48	32	45990	34	9	25	0	53
ASE_00342	RNaseP_bact_a links to Rfam database...	0.40	0.35	0.45	40	62393	49	0	48	1	75
ASE_00343	RNaseP_bact_a links to Rfam database...	0.43	0.41	0.46	46	83336	61	5	49	7	67
ASE_00346	RNaseP_arch links to Rfam database...	0.23	0.21	0.26	20	48128	58	3	54	1	77
ASE_00353	RNaseP_bact_a links to Rfam database...	0.57	0.54	0.61	58	57875	37	6	31	0	49
ASE_00359	RNaseP_arch links to Rfam database...	0.36	0.34	0.39	27	42708	43	4	39	0	53
ASE_00360	RNaseP_arch links to Rfam database...	0.20	0.20	0.21	13	29342	50	10	38	2	52
ASE_00361	RNaseP_bact_a links to Rfam database...	0.37	0.32	0.43	41	75371	54	2	52	0	86
ASE_00362	RNaseP_bact_a links to Rfam database...	0.54	0.52	0.57	47	48123	35	5	30	0	44
ASE_00363	RNaseP_bact_a links to Rfam database...	0.50	0.46	0.54	43	51281	42	6	30	6	51
ASE_00364	RNaseP_bact_a links to Rfam database...	0.37	0.34	0.40	36	54195	54	3	51	0	69
ASE_00366	RNaseP_bact_a links to Rfam database...	0.34	0.33	0.35	32	58562	59	8	51	0	66
ASE_00367	RNaseP_bact_a links to Rfam database...	0.30	0.27	0.33	23	43001	51	5	42	4	63
ASE_00369	RNaseP_bact_a links to Rfam database...	0.54	0.49	0.60	52	55859	37	1	33	3	55
ASE_00370	RNaseP_bact_a links to Rfam database...	0.41	0.37	0.46	31	41837	42	5	32	5	53
ASE_00372	RNaseP_bact_a links to Rfam database...	0.44	0.40	0.48	40	51919	49	1	43	5	60
ASE_00374	RNaseP_bact_a links to Rfam database...	0.45	0.41	0.50	36	44778	38	4	32	2	52
ASE_00375	RNaseP_bact_a links to Rfam database...	0.61	0.55	0.67	61	60287	36	1	29	6	49
ASE_00376	RNaseP_bact_a links to Rfam database...	0.59	0.53	0.66	56	56868	33	4	25	4	49
ASE_00377	RNaseP_bact_a links to Rfam database...	0.67	0.63	0.73	67	57538	29	3	22	4	40
ASE_00379	RNaseP_bact_a links to Rfam database...	0.33	0.30	0.36	27	45981	50	7	41	2	62
ASE_00380	RNaseP_bact_a links to Rfam database...	0.56	0.52	0.61	51	54863	34	7	25	2	48
ASE_00382	RNaseP_bact_a links to Rfam database...	0.63	0.56	0.71	47	41839	25	0	19	6	37
ASE_00383	RNaseP_bact_a links to Rfam database...	0.47	0.43	0.51	45	54527	45	1	42	2	60
ASE_00384	RNaseP_bact_a links to Rfam database...	0.53	0.47	0.61	43	48445	36	2	26	8	49
ASE_00385	RNaseP_bact_a links to Rfam database...	0.39	0.32	0.48	26	41851	28	6	22	0	55
ASE_00386	RNaseP_bact_a links to Rfam database...	0.43	0.39	0.47	37	50325	46	7	34	5	59
ASE_00387	RNaseP_bact_a links to Rfam database...	0.40	0.37	0.44	38	55858	49	8	41	0	66
ASE_00388	RNaseP_bact_a links to Rfam database...	0.49	0.44	0.55	39	45682	39	1	31	7	50
ASE_00390	RNaseP_bact_a links to Rfam database...	0.43	0.38	0.48	32	42129	39	3	31	5	53
ASE_00393	RNaseP_bact_a links to Rfam database...	0.34	0.30	0.39	28	47824	49	1	42	6	65
ASE_00394	RNaseP_bact_a links to Rfam database...	0.37	0.32	0.42	30	46899	45	2	40	3	63
ASE_00395	RNaseP_bact_a links to Rfam database...	0.43	0.39	0.48	33	41547	42	3	33	6	51
ASE_00396	RNaseP_bact_a links to Rfam database...	0.45	0.42	0.49	35	41544	40	7	30	3	48
ASE_00397	RNaseP_bact_a links to Rfam database...	0.34	0.31	0.38	33	54528	55	4	50	1	72
ASE_00398	RNaseP_bact_a links to Rfam database...	0.56	0.50	0.62	52	55861	35	5	27	3	52
ASE_00400	RNaseP_bact_a links to Rfam database...	0.51	0.47	0.56	50	57881	43	4	35	4	56
ASE_00401	RNaseP_bact_a links to Rfam database...	0.51	0.48	0.54	60	76917	51	4	47	0	66
ASE_00402	RNaseP_bact_a links to Rfam database...	0.39	0.34	0.44	29	42420	39	5	32	2	56
ASE_00403	RNaseP_bact_a links to Rfam database...	0.31	0.27	0.36	29	55864	57	1	51	5	78
ASE_00404	RNaseP_bact_a links to Rfam database...	0.28	0.26	0.31	22	43000	53	7	42	4	63
ASE_00406	RNaseP_bact_a links to Rfam database...	0.69	0.63	0.77	59	48751	24	0	18	6	35
ASE_00408	-	0.31	0.27	0.35	19	32331	35	1	34	0	52
ASE_00409	-	0.48	0.45	0.53	37	40971	33	1	32	0	46
ASE_00411	RNaseP_bact_a links to Rfam database...	0.37	0.34	0.40	30	49380	50	5	40	5	59
ASE_00412	RNaseP_bact_a links to Rfam database...	0.43	0.38	0.48	40	58228	43	5	38	0	65
ASE_00413	RNaseP_bact_a links to Rfam database...	0.60	0.58	0.62	47	44475	35	8	21	6	34
ASE_00414	RNaseP_bact_a links to Rfam database...	0.33	0.29	0.37	28	46284	54	4	44	6	67
ASE_00415	RNaseP_bact_a links to Rfam database...	0.39	0.34	0.45	35	54868	46	0	43	3	68
ASE_00416	RNaseP_bact_a links to Rfam database...	0.40	0.35	0.45	45	77321	55	2	53	0	82
ASE_00417	RNaseP_arch links to Rfam database...	0.46	0.44	0.47	44	54522	50	3	46	1	56
ASE_00418	RNaseP_arch links to Rfam database...	0.29	0.27	0.32	20	38719	44	0	42	2	55
ASE_00419	RNaseP_bact_a links to Rfam database...	0.65	0.60	0.70	62	54858	27	3	23	1	41
ASE_00422	RNaseP_bact_a links to Rfam database...	0.71	0.64	0.79	60	46895	21	1	15	5	34
ASE_00423	RNaseP_bact_a links to Rfam database...	0.61	0.56	0.66	61	56860	32	6	26	0	48
ASE_00426	RNaseP_bact_a links to Rfam database...	0.34	0.31	0.38	33	60988	54	5	49	0	75
ASE_00428	RNaseP_bact_a links to Rfam database...	0.26	0.23	0.29	29	76537	70	2	68	0	96
ASE_00429	-	0.23	0.21	0.25	14	28147	47	4	38	5	52
ASE_00430	RNaseP_bact_a links to Rfam database...	0.75	0.67	0.83	65	46893	18	1	12	5	32
ASE_00431	RNaseP_bact_a links to Rfam database...	0.31	0.26	0.37	25	46292	43	6	37	0	70
ASE_00434	RNaseP_bact_b links to Rfam database...	0.36	0.34	0.38	37	68167	64	11	50	3	73
ASE_00437	RNaseP_bact_a links to Rfam database...	0.40	0.34	0.46	46	79302	53	2	51	0	89
ASE_00438	RNaseP_bact_a links to Rfam database...	0.39	0.34	0.46	39	65982	45	0	45	0	77
ASE_00441	RNaseP_bact_a links to Rfam database...	0.36	0.32	0.41	36	64173	52	0	52	0	76
ASE_00447	RNaseP_bact_a links to Rfam database...	0.35	0.29	0.43	34	60298	47	1	45	1	82
ASE_00448	RNaseP_bact_a links to Rfam database...	0.28	0.26	0.30	29	64164	68	6	62	0	83
ASE_00451	RNaseP_bact_a links to Rfam database...	0.38	0.34	0.43	42	70778	56	3	53	0	83
CRW_00016	Intron_gpI links to Rfam database...	0.53	0.46	0.61	55	77331	44	4	31	9	65
CRW_00608	-	0.25	0.23	0.28	18	35713	47	12	35	0	61
CRW_00610	Intron_gpI links to Rfam database...	0.40	0.36	0.46	29	36252	37	5	29	3	52
CRW_00611	-	0.77	0.68	0.86	51	31316	8	3	5	0	24
CRW_00613	Intron_gpI links to Rfam database...	0.48	0.42	0.54	33	34919	34	2	26	6	45
CRW_00618	Intron_gpI links to Rfam database...	0.33	0.31	0.35	19	56225	57	6	30	21	42
CRW_00629	-	0.35	0.33	0.38	40	91273	69	1	64	4	82
CRW_00632	-	0.50	0.48	0.53	61	82912	58	6	49	3	67
CRW_00633	Intron_gpI links to Rfam database...	0.38	0.35	0.42	37	63457	52	6	46	0	69
CRW_00634	Intron_gpI links to Rfam database...	0.29	0.28	0.30	26	64533	68	8	53	7	68
CRW_00641	-	0.35	0.33	0.37	25	39836	47	3	39	5	51
CRW_00642	-	0.59	0.60	0.58	39	47211	44	8	20	16	26
CRW_00645	-	0.52	0.49	0.55	33	35451	35	7	20	8	34
CRW_00646	-	0.48	0.44	0.53	28	34927	39	2	23	14	36
CRW_00651	-	0.39	0.37	0.41	45	100018	70	13	52	5	76
CRW_00653	-	0.56	0.54	0.59	72	94707	52	3	48	1	62
CRW_00654	-	0.67	0.62	0.73	77	78104	30	3	26	1	47
CRW_00655	-	0.61	0.56	0.67	70	89148	36	3	32	1	54
CRW_00656	-	0.15	0.14	0.16	18	90413	95	13	81	1	111
CRW_00658	-	0.31	0.27	0.34	28	74609	60	3	51	6	74
CRW_00659	-	0.29	0.31	0.28	19	32317	49	14	35	0	42
CRW_00660	-	0.59	0.58	0.59	35	22096	25	6	18	1	25
CRW_00661	-	0.09	0.10	0.09	5	24256	51	15	34	2	46
CRW_00662	-	0.15	0.15	0.14	10	28611	61	6	53	2	55
CRW_00663	-	0.17	0.16	0.19	10	26053	47	2	41	4	51
CRW_00664	-	0.21	0.21	0.21	16	53551	71	10	51	10	62
CRW_00665	-	0.08	0.08	0.08	4	23605	45	9	35	1	44
CRW_00666	-	0.17	0.15	0.19	19	96043	86	5	74	7	107
CRW_00669	-	0.39	0.36	0.42	43	97359	71	6	53	12	76
CRW_00670	Intron_gpI links to Rfam database...	0.37	0.34	0.41	41	70025	60	3	56	1	79
CRW_00671	Intron_gpI links to Rfam database...	0.55	0.50	0.60	59	62736	40	2	38	0	58
CRW_00672	Intron_gpI links to Rfam database...	0.30	0.29	0.32	32	72291	71	14	53	4	79
CRW_00673	-	0.36	0.36	0.35	38	100020	84	21	49	14	67
CRW_00674	Intron_gpI links to Rfam database...	0.29	0.26	0.33	32	83339	67	8	57	2	92
CRW_00676	Intron_gpI links to Rfam database...	0.34	0.34	0.34	39	93413	80	20	56	4	76
CRW_00677	-	0.41	0.39	0.42	41	71913	61	12	44	5	64
CRW_00679	-	0.32	0.29	0.34	31	76546	65	6	53	6	76
CRW_00686	-	0.43	0.41	0.46	51	95156	64	8	51	5	74
CRW_00687	-	0.32	0.30	0.33	20	28620	43	8	32	3	46
CRW_00688	-	0.72	0.70	0.74	40	21891	17	5	9	3	17
CRW_00689	-	0.45	0.43	0.46	33	33599	42	9	29	4	44
CRW_00690	-	0.22	0.20	0.24	14	33353	48	7	37	4	55
CRW_00691	-	0.57	0.57	0.58	38	27196	28	2	25	1	29
CRW_00692	Intron_gpI links to Rfam database...	0.26	0.24	0.28	22	68555	62	20	38	4	68
CRW_00693	-	0.33	0.31	0.35	38	89145	74	7	63	4	84
CRW_00694	-	0.35	0.32	0.38	39	85801	68	7	58	3	83
CRW_00699	-	0.30	0.29	0.32	36	91692	78	6	72	0	90
CRW_00703	-	0.24	0.23	0.25	15	40410	50	5	40	5	51
CRW_00715	-	0.52	0.48	0.57	50	69291	38	3	34	1	54
CRW_00721	-	0.27	0.25	0.28	17	58593	63	7	36	20	51
PDB_00078	-	0.42	0.38	0.47	44	49677	49	6	43	0	71
PDB_00278	-	0.47	0.43	0.53	31	24917	28	2	26	0	41
PDB_00423	-	0.68	0.59	0.77	44	26739	13	1	12	0	30
PDB_00701	-	0.15	0.14	0.17	15	45365	72	7	64	1	94
PDB_00747	-	0.58	0.49	0.70	39	24475	18	1	16	1	41
PDB_00827	Intron_gpI links to Rfam database...	0.65	0.54	0.79	44	26972	13	0	12	1	37
PDB_00917	-	0.64	0.58	0.71	55	35168	30	4	18	8	40
PDB_00919	RNaseP_bact_a links to Rfam database...	0.29	0.24	0.36	25	44183	45	2	43	0	78
PDB_01129	-	0.13	0.13	0.13	9	35442	64	14	46	4	62
PDB_01157	-	0.32	0.30	0.34	29	50001	56	15	41	0	69
RFA_00597	Telomerase-vert links to Rfam database...	0.15	0.15	0.15	16	97796	96	11	80	5	93
RFA_00598	Telomerase-vert links to Rfam database...	0.14	0.13	0.14	13	84576	88	14	63	11	88
RFA_00601	Telomerase-vert links to Rfam database...	0.10	0.11	0.11	12	99122	105	21	80	4	102
TMR_00007	tmRNA links to Rfam database...	0.18	0.16	0.20	17	61691	73	7	61	5	91
TMR_00008	tmRNA links to Rfam database...	0.33	0.32	0.35	34	65969	70	9	54	7	72
TMR_00010	tmRNA links to Rfam database...	0.15	0.15	0.16	14	57885	71	7	64	0	82
TMR_00012	tmRNA links to Rfam database...	0.23	0.22	0.23	18	64542	76	13	47	16	63
TMR_00014	tmRNA links to Rfam database...	0.29	0.27	0.31	30	68539	73	4	62	7	80
TMR_00017	tmRNA links to Rfam database...	0.33	0.29	0.37	30	67080	55	4	47	4	72
TMR_00018	tmRNA links to Rfam database...	0.24	0.23	0.25	21	64536	67	11	52	4	71
TMR_00028	tmRNA links to Rfam database...	0.14	0.13	0.14	13	62743	80	12	67	1	84
TMR_00030	tmRNA links to Rfam database...	0.32	0.31	0.34	34	75756	69	13	52	4	77
TMR_00034	tmRNA links to Rfam database...	0.34	0.31	0.37	34	59938	66	3	56	7	76
TMR_00035	tmRNA links to Rfam database...	0.41	0.40	0.43	39	67806	56	16	35	5	59
TMR_00036	tmRNA links to Rfam database...	0.23	0.21	0.27	21	90446	83	7	51	25	80
TMR_00038	tmRNA links to Rfam database...	0.37	0.35	0.40	39	71155	62	14	45	3	71
TMR_00042	tmRNA links to Rfam database...	0.20	0.18	0.22	18	62753	67	12	52	3	80
TMR_00046	tmRNA links to Rfam database...	0.25	0.25	0.26	24	62741	75	15	55	5	72
TMR_00047	tmRNA links to Rfam database...	0.09	0.09	0.09	5	48459	67	14	38	15	52
TMR_00048	tmRNA links to Rfam database...	0.23	0.22	0.24	21	64894	71	14	51	6	74
TMR_00049	tmRNA links to Rfam database...	0.10	0.09	0.10	8	63111	75	14	57	4	79
TMR_00051	tmRNA links to Rfam database...	0.42	0.40	0.44	38	65617	54	10	38	6	56
TMR_00055	tmRNA links to Rfam database...	0.22	0.21	0.24	24	78902	80	16	61	3	90
TMR_00057	tmRNA links to Rfam database...	0.11	0.11	0.10	9	73831	92	15	65	12	70
TMR_00061	tmRNA links to Rfam database...	0.00	0.00	0.00	0	59607	85	4	74	7	99
TMR_00062	tmRNA links to Rfam database...	0.22	0.21	0.23	22	78511	77	13	60	4	82
TMR_00064	tmRNA links to Rfam database...	0.19	0.18	0.20	19	76932	77	24	53	0	84
TMR_00065	tmRNA links to Rfam database...	0.07	0.07	0.09	7	76554	78	16	59	3	99
TMR_00067	tmRNA links to Rfam database...	0.35	0.33	0.37	38	82113	70	6	58	6	76
TMR_00073	tmRNA links to Rfam database...	0.28	0.25	0.32	29	65612	62	5	57	0	88
TMR_00076	tmRNA links to Rfam database...	0.31	0.29	0.34	29	70790	62	11	46	5	71
TMR_00080	tmRNA links to Rfam database...	0.14	0.14	0.14	13	70410	79	15	62	2	83
TMR_00081	tmRNA links to Rfam database...	0.23	0.21	0.26	22	67076	63	9	54	0	84
TMR_00082	tmRNA links to Rfam database...	0.24	0.23	0.26	22	67811	65	9	54	2	74
TMR_00083	tmRNA links to Rfam database...	0.34	0.31	0.37	33	68175	61	2	55	4	72
TMR_00092	tmRNA links to Rfam database...	0.23	0.23	0.24	23	67433	76	16	56	4	78
TMR_00093	tmRNA links to Rfam database...	0.25	0.24	0.27	24	64171	71	10	56	5	78
TMR_00096	tmRNA links to Rfam database...	0.11	0.10	0.12	10	64894	81	13	63	5	90
TMR_00101	tmRNA links to Rfam database...	0.31	0.29	0.34	31	64169	66	13	48	5	76
TMR_00102	tmRNA links to Rfam database...	0.29	0.28	0.31	28	64171	68	6	56	6	73
TMR_00103	tmRNA links to Rfam database...	0.30	0.30	0.31	32	64157	73	6	66	1	76
TMR_00104	-	0.23	0.24	0.22	17	66719	69	19	40	10	53
TMR_00106	tmRNA links to Rfam database...	0.32	0.30	0.33	36	89992	73	15	57	1	84
TMR_00109	tmRNA links to Rfam database...	0.15	0.13	0.16	16	88312	87	11	71	5	106
TMR_00111	tmRNA links to Rfam database...	0.26	0.23	0.30	28	90433	72	5	59	8	94
TMR_00116	tmRNA links to Rfam database...	0.32	0.28	0.37	29	64902	61	5	44	12	75
TMR_00117	tmRNA links to Rfam database...	0.17	0.15	0.18	18	80102	89	6	74	9	100
TMR_00118	tmRNA links to Rfam database...	0.15	0.15	0.16	18	81294	101	9	85	7	102
TMR_00119	tmRNA links to Rfam database...	0.22	0.21	0.23	22	71916	76	15	57	4	82
TMR_00123	tmRNA links to Rfam database...	0.35	0.33	0.38	33	66344	58	7	46	5	68
TMR_00124	tmRNA links to Rfam database...	0.27	0.27	0.28	26	70408	71	7	59	5	72
TMR_00125	tmRNA links to Rfam database...	0.26	0.24	0.28	24	64174	67	12	51	4	75
TMR_00127	tmRNA links to Rfam database...	0.31	0.30	0.33	29	62748	64	10	48	6	68
TMR_00128	tmRNA links to Rfam database...	0.44	0.41	0.48	39	60993	49	5	38	6	57
TMR_00131	tmRNA links to Rfam database...	0.38	0.35	0.40	35	64893	59	7	45	7	64
TMR_00135	tmRNA links to Rfam database...	0.31	0.28	0.35	28	62754	60	8	45	7	71
TMR_00136	tmRNA links to Rfam database...	0.30	0.29	0.32	29	74601	67	9	52	6	72
TMR_00137	tmRNA links to Rfam database...	0.08	0.08	0.09	7	60996	81	8	64	9	82
TMR_00139	tmRNA links to Rfam database...	0.26	0.26	0.25	24	62033	76	19	52	5	67
TMR_00140	tmRNA links to Rfam database...	0.23	0.21	0.26	21	73838	75	10	51	14	79
TMR_00142	tmRNA links to Rfam database...	0.09	0.09	0.10	9	70782	92	13	72	7	93
TMR_00143	tmRNA links to Rfam database...	0.39	0.34	0.44	35	64541	54	5	39	10	68
TMR_00144	tmRNA links to Rfam database...	0.09	0.09	0.09	9	74205	94	16	75	3	94
TMR_00146	tmRNA links to Rfam database...	0.26	0.26	0.26	11	32089	52	11	20	21	31
TMR_00150	tmRNA links to Rfam database...	0.14	0.12	0.16	5	43040	57	2	24	31	37
TMR_00152	tmRNA links to Rfam database...	0.09	0.08	0.10	9	81316	90	11	70	9	106
TMR_00155	tmRNA links to Rfam database...	0.33	0.29	0.38	30	61696	56	2	48	6	74
TMR_00156	tmRNA links to Rfam database...	0.28	0.27	0.30	26	60290	66	12	50	4	71
TMR_00158	tmRNA links to Rfam database...	0.33	0.30	0.37	30	60645	55	9	42	4	69
TMR_00159	tmRNA links to Rfam database...	0.30	0.28	0.32	26	62047	60	12	43	5	66
TMR_00160	tmRNA links to Rfam database...	0.29	0.27	0.31	26	64536	66	13	45	8	69
TMR_00164	tmRNA links to Rfam database...	0.35	0.30	0.40	32	66715	56	3	45	8	74
TMR_00165	tmRNA links to Rfam database...	0.21	0.20	0.22	19	61690	74	7	60	7	78
TMR_00166	tmRNA links to Rfam database...	0.29	0.27	0.31	27	61689	66	6	54	6	74
TMR_00168	tmRNA links to Rfam database...	0.51	0.45	0.57	51	60986	38	2	36	0	63
TMR_00173	tmRNA links to Rfam database...	0.32	0.33	0.32	14	42151	66	10	20	36	28
TMR_00179	tmRNA links to Rfam database...	0.22	0.20	0.25	20	67081	71	6	54	11	78
TMR_00180	tmRNA links to Rfam database...	0.32	0.31	0.34	31	67069	67	19	42	6	68
TMR_00182	tmRNA links to Rfam database...	0.16	0.15	0.17	15	66344	75	12	59	4	87
TMR_00183	tmRNA links to Rfam database...	0.22	0.20	0.24	21	63101	73	9	59	5	82
TMR_00184	tmRNA links to Rfam database...	0.25	0.23	0.27	23	63105	71	10	52	9	79
TMR_00193	tmRNA links to Rfam database...	0.24	0.24	0.25	19	59264	64	13	44	7	61
TMR_00194	tmRNA links to Rfam database...	0.31	0.28	0.34	26	62759	57	8	42	7	67
TMR_00196	tmRNA links to Rfam database...	0.35	0.33	0.37	32	60988	60	14	41	5	65
TMR_00199	tmRNA links to Rfam database...	0.19	0.20	0.20	18	62743	79	26	48	5	74
TMR_00200	-	0.37	0.36	0.38	27	41545	50	8	36	6	48
TMR_00204	tmRNA links to Rfam database...	0.22	0.21	0.25	20	60297	69	10	51	8	77
TMR_00207	tmRNA links to Rfam database...	0.17	0.17	0.18	17	72293	85	16	64	5	86
TMR_00223	tmRNA links to Rfam database...	0.21	0.20	0.22	19	64173	73	14	55	4	76
TMR_00224	tmRNA links to Rfam database...	0.19	0.17	0.21	17	64900	68	9	54	5	84
TMR_00226	tmRNA links to Rfam database...	0.25	0.23	0.27	24	69661	72	12	54	6	81
TMR_00227	tmRNA links to Rfam database...	0.21	0.21	0.22	21	70030	77	12	62	3	80
TMR_00228	tmRNA links to Rfam database...	0.20	0.19	0.21	20	88314	85	12	64	9	88
TMR_00234	tmRNA links to Rfam database...	0.21	0.20	0.23	20	58910	73	12	54	7	82
TMR_00238	tmRNA links to Rfam database...	0.37	0.38	0.37	38	84562	74	16	50	8	63
TMR_00239	tmRNA links to Rfam database...	0.34	0.32	0.35	31	61688	57	6	51	0	65
TMR_00240	tmRNA links to Rfam database...	0.27	0.27	0.27	23	63104	66	15	48	3	62
TMR_00246	-	0.23	0.24	0.24	8	78176	94	5	21	68	26
TMR_00248	tmRNA links to Rfam database...	0.27	0.29	0.25	11	54241	70	14	19	37	27
TMR_00257	tmRNA links to Rfam database...	0.10	0.09	0.11	9	67077	79	7	68	4	89
TMR_00259	tmRNA links to Rfam database...	0.18	0.16	0.20	16	67817	64	8	55	1	87
TMR_00261	tmRNA links to Rfam database...	0.34	0.33	0.35	33	66701	65	11	50	4	68
TMR_00262	tmRNA links to Rfam database...	0.27	0.25	0.29	26	74214	69	16	49	4	78
TMR_00271	tmRNA links to Rfam database...	0.21	0.19	0.23	17	64188	64	6	50	8	74
TMR_00274	tmRNA links to Rfam database...	0.35	0.31	0.39	33	66711	57	6	45	6	72
TMR_00278	tmRNA links to Rfam database...	0.13	0.13	0.14	13	67803	88	11	69	8	89
TMR_00279	tmRNA links to Rfam database...	0.16	0.15	0.16	14	68921	76	13	58	5	80
TMR_00280	tmRNA links to Rfam database...	0.11	0.10	0.11	10	65979	89	7	70	12	91
TMR_00283	tmRNA links to Rfam database...	0.28	0.26	0.30	25	65258	63	8	50	5	71
TMR_00289	tmRNA links to Rfam database...	0.11	0.10	0.12	10	67078	83	4	69	10	88
TMR_00290	tmRNA links to Rfam database...	0.20	0.18	0.21	17	64180	64	17	47	0	75
TMR_00296	tmRNA links to Rfam database...	0.12	0.12	0.13	12	68911	84	17	66	1	86
TMR_00298	tmRNA links to Rfam database...	0.24	0.24	0.24	24	68164	85	9	68	8	77
TMR_00300	tmRNA links to Rfam database...	0.31	0.29	0.33	32	70404	74	6	58	10	80
TMR_00301	tmRNA links to Rfam database...	0.45	0.44	0.47	42	82125	57	11	37	9	54
TMR_00302	tmRNA links to Rfam database...	0.34	0.32	0.36	30	77337	64	11	43	10	64
TMR_00305	tmRNA links to Rfam database...	0.20	0.18	0.22	18	60994	72	12	51	9	84
TMR_00306	tmRNA links to Rfam database...	0.32	0.30	0.35	32	64170	62	6	53	3	74
TMR_00310	tmRNA links to Rfam database...	0.24	0.22	0.27	22	63820	72	11	50	11	76
TMR_00317	tmRNA links to Rfam database...	0.28	0.27	0.28	28	68166	73	10	61	2	74
TMR_00331	tmRNA links to Rfam database...	0.29	0.29	0.28	24	66710	74	13	48	13	58
TMR_00332	tmRNA links to Rfam database...	0.19	0.17	0.21	17	67081	68	7	56	5	82
TMR_00334	tmRNA links to Rfam database...	0.32	0.29	0.36	29	66714	59	4	48	7	72
TMR_00337	tmRNA links to Rfam database...	0.16	0.14	0.18	17	82933	84	10	68	6	102
TMR_00340	tmRNA links to Rfam database...	0.13	0.12	0.13	10	64184	84	11	56	17	71
TMR_00341	tmRNA links to Rfam database...	0.39	0.38	0.39	35	63101	57	18	36	3	57
TMR_00343	tmRNA links to Rfam database...	0.31	0.28	0.34	29	64895	64	5	51	8	76
TMR_00345	tmRNA links to Rfam database...	0.35	0.34	0.37	35	63809	63	14	45	4	69
TMR_00346	tmRNA links to Rfam database...	0.22	0.21	0.22	20	64171	74	7	63	4	74
TMR_00348	tmRNA links to Rfam database...	0.05	0.05	0.05	5	77327	100	15	74	11	94
TMR_00352	tmRNA links to Rfam database...	0.12	0.12	0.13	9	95195	91	17	45	29	66
TMR_00353	tmRNA links to Rfam database...	0.16	0.15	0.17	16	84160	95	17	62	16	89
TMR_00357	tmRNA links to Rfam database...	0.24	0.22	0.26	20	82950	75	7	51	17	72
TMR_00358	tmRNA links to Rfam database...	0.17	0.15	0.20	15	75002	78	9	52	17	84
TMR_00361	-	0.15	0.15	0.14	11	93450	84	24	43	17	61
TMR_00366	tmRNA links to Rfam database...	0.17	0.16	0.18	16	67807	79	13	60	6	84
TMR_00372	tmRNA links to Rfam database...	0.14	0.13	0.15	12	70419	82	6	63	13	84
TMR_00374	tmRNA links to Rfam database...	0.14	0.13	0.14	12	81727	84	9	62	13	80
TMR_00375	tmRNA links to Rfam database...	0.36	0.33	0.39	32	73454	60	9	41	10	66
TMR_00376	tmRNA links to Rfam database...	0.30	0.31	0.29	29	74591	82	14	57	11	66
TMR_00378	tmRNA links to Rfam database...	0.20	0.20	0.20	19	67800	82	13	64	5	78
TMR_00383	tmRNA links to Rfam database...	0.17	0.16	0.18	16	66705	81	3	71	7	84
TMR_00384	tmRNA links to Rfam database...	0.33	0.29	0.39	31	65624	52	3	45	4	77
TMR_00393	tmRNA links to Rfam database...	0.26	0.26	0.26	14	53247	68	13	27	28	39
TMR_00395	tmRNA links to Rfam database...	0.50	0.45	0.56	49	64532	44	4	35	5	60
TMR_00398	tmRNA links to Rfam database...	0.44	0.40	0.50	42	65257	46	1	41	4	64
TMR_00399	tmRNA links to Rfam database...	0.17	0.17	0.18	16	64889	78	15	60	3	78
TMR_00404	tmRNA links to Rfam database...	0.28	0.28	0.27	26	67433	70	22	47	1	66
TMR_00408	tmRNA links to Rfam database...	0.14	0.14	0.15	12	65986	78	17	51	10	76
TMR_00409	tmRNA links to Rfam database...	0.12	0.11	0.13	5	68595	84	7	28	49	41
TMR_00411	tmRNA links to Rfam database...	0.10	0.10	0.11	9	60990	81	12	64	5	78
TMR_00415	tmRNA links to Rfam database...	0.16	0.15	0.18	15	67078	69	12	56	1	86
TMR_00419	tmRNA links to Rfam database...	0.18	0.16	0.21	18	81724	80	9	59	12	93
TMR_00422	tmRNA links to Rfam database...	0.22	0.22	0.22	20	67804	78	15	57	6	72
TMR_00423	tmRNA links to Rfam database...	0.17	0.19	0.16	14	63814	80	21	54	5	59
TMR_00427	tmRNA links to Rfam database...	0.12	0.11	0.13	11	67445	79	8	64	7	86
TMR_00429	tmRNA links to Rfam database...	0.23	0.21	0.24	23	74597	77	10	61	6	86
TMR_00430	tmRNA links to Rfam database...	0.17	0.17	0.19	18	82525	84	7	71	6	91
TMR_00431	tmRNA links to Rfam database...	0.31	0.31	0.32	17	51950	70	10	26	34	38
TMR_00432	tmRNA links to Rfam database...	0.19	0.19	0.20	20	79698	88	12	70	6	84
TMR_00433	tmRNA links to Rfam database...	0.08	0.08	0.08	8	80105	90	11	76	3	98
TMR_00439	tmRNA links to Rfam database...	0.27	0.26	0.28	26	68542	77	12	55	10	75
TMR_00441	tmRNA links to Rfam database...	0.14	0.13	0.14	11	62050	85	6	61	18	72
TMR_00443	tmRNA links to Rfam database...	0.17	0.14	0.20	15	67085	65	3	58	4	89
TMR_00448	tmRNA links to Rfam database...	0.19	0.17	0.22	16	62055	63	5	52	6	76
TMR_00451	tmRNA links to Rfam database...	0.17	0.16	0.18	14	63470	66	13	49	4	75
TMR_00457	tmRNA links to Rfam database...	0.24	0.22	0.26	22	78521	66	16	47	3	80
TMR_00458	tmRNA links to Rfam database...	0.16	0.15	0.17	14	63464	78	9	59	10	79
TMR_00460	tmRNA links to Rfam database...	0.30	0.28	0.32	30	79308	66	11	52	3	76
TMR_00465	tmRNA links to Rfam database...	0.23	0.21	0.24	20	64179	67	12	50	5	74
TMR_00469	tmRNA links to Rfam database...	0.34	0.33	0.34	33	64524	70	11	52	7	67
TMR_00472	tmRNA links to Rfam database...	0.35	0.35	0.35	34	64524	68	12	50	6	63
TMR_00478	tmRNA links to Rfam database...	0.09	0.09	0.09	9	71910	94	18	73	3	90
TMR_00498	tmRNA links to Rfam database...	0.17	0.16	0.18	16	68918	79	19	53	7	83
TMR_00499	tmRNA links to Rfam database...	0.21	0.20	0.21	20	64525	80	4	71	5	79
TMR_00501	tmRNA links to Rfam database...	0.07	0.08	0.07	7	62385	89	22	67	0	85
TMR_00502	tmRNA links to Rfam database...	0.33	0.33	0.34	31	75374	69	25	36	8	62
TMR_00503	tmRNA links to Rfam database...	0.36	0.32	0.42	35	67812	56	1	48	7	76
TMR_00519	tmRNA links to Rfam database...	0.23	0.22	0.25	21	63105	74	12	52	10	74
TMR_00520	tmRNA links to Rfam database...	0.23	0.21	0.24	21	63103	71	13	53	5	78
TMR_00522	tmRNA links to Rfam database...	0.12	0.11	0.14	11	63109	79	11	59	9	86
TMR_00528	tmRNA links to Rfam database...	0.08	0.07	0.09	7	63109	83	16	58	9	90
TMR_00540	tmRNA links to Rfam database...	0.09	0.09	0.10	9	73449	89	6	72	11	95
TMR_00541	tmRNA links to Rfam database...	0.32	0.30	0.35	32	61684	65	13	47	5	73
TMR_00544	tmRNA links to Rfam database...	0.25	0.23	0.27	25	89583	78	19	49	10	83
TMR_00547	tmRNA links to Rfam database...	0.23	0.21	0.25	21	65258	71	4	58	9	79
TMR_00553	tmRNA links to Rfam database...	0.39	0.37	0.42	30	48133	50	5	37	8	51
TMR_00559	tmRNA links to Rfam database...	0.26	0.25	0.28	25	62392	70	9	55	6	76
TMR_00560	tmRNA links to Rfam database...	0.23	0.21	0.24	21	60989	69	10	55	4	77
TMR_00562	tmRNA links to Rfam database...	0.20	0.19	0.22	19	72685	71	11	56	4	83
TMR_00563	tmRNA links to Rfam database...	0.23	0.22	0.24	23	75371	76	14	58	4	80
TMR_00566	tmRNA links to Rfam database...	0.32	0.30	0.33	30	60636	64	7	53	4	70
TMR_00568	tmRNA links to Rfam database...	0.14	0.13	0.16	13	60644	75	6	63	6	86
TMR_00570	tmRNA links to Rfam database...	0.26	0.24	0.29	23	60298	64	7	50	7	74
TMR_00571	tmRNA links to Rfam database...	0.19	0.18	0.20	18	60637	72	7	64	1	81
TMR_00576	tmRNA links to Rfam database...	0.16	0.15	0.17	15	60291	77	9	63	5	87
TMR_00579	tmRNA links to Rfam database...	0.25	0.26	0.24	23	80507	79	16	55	8	67
TMR_00580	tmRNA links to Rfam database...	0.28	0.27	0.30	27	60635	65	9	55	1	73
TMR_00581	tmRNA links to Rfam database...	0.35	0.32	0.39	31	62401	53	8	41	4	67
TMR_00584	tmRNA links to Rfam database...	0.37	0.34	0.40	33	60993	56	8	41	7	64
TMR_00586	tmRNA links to Rfam database...	0.25	0.23	0.27	22	60993	66	7	53	6	75
TMR_00587	tmRNA links to Rfam database...	0.35	0.34	0.36	34	61330	62	11	50	1	66
TMR_00588	tmRNA links to Rfam database...	0.22	0.22	0.22	22	77323	81	23	53	5	79
TMR_00594	tmRNA links to Rfam database...	0.24	0.22	0.26	23	79313	69	6	59	4	81
TMR_00596	tmRNA links to Rfam database...	0.35	0.32	0.38	30	78131	62	8	41	13	65
TMR_00599	tmRNA links to Rfam database...	0.23	0.25	0.22	18	63108	68	25	39	4	54
TMR_00600	tmRNA links to Rfam database...	0.16	0.14	0.18	16	79710	74	6	68	0	99
TMR_00601	tmRNA links to Rfam database...	0.25	0.24	0.26	10	58957	74	7	22	45	32
TMR_00603	tmRNA links to Rfam database...	0.26	0.23	0.29	10	60343	68	1	24	43	33
TMR_00604	tmRNA links to Rfam database...	0.38	0.36	0.41	40	62738	57	8	49	0	72
TMR_00605	tmRNA links to Rfam database...	0.28	0.26	0.31	28	74216	66	15	46	5	80
TMR_00606	tmRNA links to Rfam database...	0.35	0.33	0.38	35	68915	60	13	43	4	72
TMR_00609	tmRNA links to Rfam database...	0.29	0.27	0.32	30	63453	65	8	55	2	83
TMR_00610	tmRNA links to Rfam database...	0.35	0.32	0.39	33	62044	62	8	43	11	71
TMR_00611	tmRNA links to Rfam database...	0.46	0.44	0.49	45	61333	50	9	38	3	57
TMR_00612	tmRNA links to Rfam database...	0.35	0.33	0.37	34	60634	62	6	52	4	70
TMR_00614	tmRNA links to Rfam database...	0.42	0.38	0.45	40	60987	54	5	43	6	64
TMR_00615	tmRNA links to Rfam database...	0.17	0.17	0.18	16	63815	79	11	61	7	80
TMR_00616	tmRNA links to Rfam database...	0.28	0.26	0.30	26	67075	66	9	51	6	73
TMR_00617	tmRNA links to Rfam database...	0.15	0.16	0.15	9	34655	55	10	42	3	49
TMR_00623	tmRNA links to Rfam database...	0.15	0.14	0.17	15	61338	78	8	64	6	93
TMR_00624	tmRNA links to Rfam database...	0.33	0.29	0.38	31	62400	55	4	46	5	77
TMR_00625	tmRNA links to Rfam database...	0.14	0.13	0.16	14	78914	83	19	56	8	92
TMR_00626	tmRNA links to Rfam database...	0.34	0.32	0.36	35	67798	68	9	54	5	74
TMR_00680	tmRNA links to Rfam database...	0.33	0.31	0.34	31	67805	68	5	55	8	68
TMR_00681	tmRNA links to Rfam database...	0.21	0.20	0.22	19	65981	74	3	63	8	78
TMR_00683	tmRNA links to Rfam database...	0.10	0.10	0.11	10	82934	94	10	74	10	90
TMR_00686	tmRNA links to Rfam database...	0.20	0.19	0.22	20	71162	77	8	63	6	88
TMR_00687	tmRNA links to Rfam database...	0.26	0.24	0.28	27	71535	72	12	57	3	84
TMR_00696	tmRNA links to Rfam database...	0.05	0.04	0.05	5	84980	104	5	88	11	109
TMR_00698	tmRNA links to Rfam database...	0.25	0.24	0.27	25	63096	69	7	62	0	79
TMR_00699	tmRNA links to Rfam database...	0.15	0.14	0.17	14	67078	73	14	55	4	88
TMR_00702	tmRNA links to Rfam database...	0.17	0.15	0.19	15	67081	72	7	58	7	85
TMR_00703	tmRNA links to Rfam database...	0.32	0.29	0.35	29	67446	60	5	48	7	70
TMR_00706	tmRNA links to Rfam database...	0.25	0.22	0.28	23	66348	59	11	48	0	80
TMR_00711	tmRNA links to Rfam database...	0.24	0.21	0.27	21	67818	61	14	43	4	77
TMR_00712	tmRNA links to Rfam database...	0.22	0.22	0.22	24	78498	84	16	68	0	85
TMR_00716	tmRNA links to Rfam database...	0.22	0.20	0.24	20	62752	67	9	54	4	80

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Matthews Correlation Coeffient, Sensitivity and Positive Predictive Value have been calculated based on the paper by Gardener & Giegerich, 2004.

Table of contents:

Overview

Performance plots

Performance of Contrafold - scored higher in this pairwise comparison

1. Total counts & total scores for Contrafold

2. Individual counts for Contrafold [ download as .csv ]

Performance of Vsfold4 - scored lower in this pairwise comparison

1. Total counts & total scores for Vsfold4

2. Individual counts for Vsfold4 [ download as .csv ]