CompaRNA - on-line benchmarks of RNA structure prediction methods

Laboratory of Structural Bioinformatics @ Adam Mickiewicz University in Poznan

Home

Methods

Datasets

Rankings

RNA 2D Atlas

Help

FAQ

Contact us

RSS feeds

Twitter

Overview

Metric	IPknot		Sfold
MCC	0.602	>	0.514
Average MCC ± 95% Confidence Intervals	0.597 ± 0.012	>	0.510 ± 0.014
Sensitivity	0.545	>	0.463
Positive Predictive Value	0.667	>	0.571
Total TP	34236	>	29124
Total TN	43348021	<	43348323
Total FP	21359	<	26415
Total FP CONTRA	3324	<	3783
Total FP INCONS	13756	<	18107
Total FP COMP	4279	<	4525
Total FN	28639	<	33751
P-value	3.56938820447e-08

^top

Performance plots

Comparison of performance of IPknot and Sfold. Positive Predictive Value (PPV) is plotted against sensitivity. Each dot represents a single test of each method. See tables below for raw data (individual counts for IPknot and Sfold).
Average Matthews Correlation Coefficients (MCC) with 95% confidence intervals (CIs) were plotted for different RNA families, for which at least 3 members were present in the benchmarking dataset. 'n' denotes the number of MCCs used to calculate the average and CI. See tables below for raw data (individual counts for IPknot and Sfold).
Comparison of average Matthews Correlation Coefficients (MCCs) for IPknot and Sfold. The whiskers correspond to 95% confidence intervals (CIs). 'n' denotes the number of MCCs used to calculate average MCCs and CIs. See tables below for raw data (individual counts for IPknot and Sfold).

^top

Performance of IPknot - scored higher in this pairwise comparison

1. Total counts & total scores for IPknot

Total Base Pair Counts
Total TP	34236
Total TN	43348021
Total FP	21359
Total FP CONTRA	3324
Total FP INCONS	13756
Total FP COMP	4279
Total FN	28639

Total Scores
MCC	0.602
Average MCC ± 95% Confidence Intervals	0.597 ± 0.012
Sensitivity	0.545
Positive Predictive Value	0.667
Nr of predictions	610

^top

2. Individual counts for IPknot [ download as .csv ]

RNA Chain	Rfam family	MCC	SENS	PPV	TP	TN	FP	FP CONTRA	FP INCONS	FP COMP	FN
ASE_00001	RNaseP_arch links to Rfam database...	0.76	0.73	0.80	55	34122	20	3	11	6	20
ASE_00002	RNaseP_arch links to Rfam database...	0.68	0.62	0.75	45	35451	20	2	13	5	28
ASE_00004	RNaseP_bact_a links to Rfam database...	0.75	0.66	0.85	64	47820	11	5	6	0	33
ASE_00005	RNaseP_bact_a links to Rfam database...	0.59	0.51	0.69	60	57883	30	0	27	3	57
ASE_00006	RNaseP_bact_a links to Rfam database...	0.60	0.52	0.70	48	47517	22	3	18	1	45
ASE_00007	RNaseP_bact_a links to Rfam database...	0.63	0.55	0.72	60	59602	27	0	23	4	50
ASE_00009	RNaseP_arch links to Rfam database...	0.71	0.67	0.75	45	26046	15	0	15	0	22
ASE_00012	RNaseP_bact_a links to Rfam database...	0.66	0.56	0.78	69	73832	22	5	14	3	54
ASE_00014	RNaseP_arch links to Rfam database...	0.56	0.50	0.63	53	54201	33	7	24	2	53
ASE_00017	RNaseP_nuc links to Rfam database...	0.28	0.31	0.26	20	50962	71	19	39	13	44
ASE_00018	RNaseP_bact_a links to Rfam database...	0.70	0.64	0.77	86	80489	27	0	26	1	48
ASE_00020	RNaseP_bact_a links to Rfam database...	0.67	0.58	0.77	73	73825	22	2	20	0	53
ASE_00021	RNaseP_bact_a links to Rfam database...	0.70	0.57	0.85	91	104089	21	3	13	5	69
ASE_00022	RNaseP_bact_b links to Rfam database...	0.69	0.52	0.93	64	82959	9	0	5	4	60
ASE_00023	RNaseP_bact_a links to Rfam database...	0.69	0.59	0.82	75	84163	20	0	17	3	52
ASE_00025	RNaseP_nuc links to Rfam database...	0.39	0.35	0.43	25	78548	82	5	28	49	46
ASE_00026	RNaseP_bact_a links to Rfam database...	0.56	0.50	0.63	55	59598	36	3	29	4	55
ASE_00028	RNaseP_bact_b links to Rfam database...	0.70	0.60	0.81	76	84572	24	3	15	6	50
ASE_00029	RNaseP_bact_a links to Rfam database...	0.68	0.57	0.81	70	82942	16	4	12	0	52
ASE_00030	RNaseP_bact_a links to Rfam database...	0.78	0.70	0.87	102	85374	15	3	12	0	43
ASE_00031	RNaseP_bact_a links to Rfam database...	0.62	0.54	0.71	68	86640	32	1	27	4	58
ASE_00032	RNaseP_bact_a links to Rfam database...	0.68	0.58	0.78	69	80112	22	0	19	3	49
ASE_00033	RNaseP_bact_a links to Rfam database...	0.71	0.57	0.88	69	64902	11	0	9	2	52
ASE_00035	RNaseP_bact_a links to Rfam database...	0.44	0.30	0.66	35	70447	21	4	14	3	83
ASE_00036	RNaseP_bact_a links to Rfam database...	0.58	0.52	0.66	68	75752	37	4	31	2	64
ASE_00037	RNaseP_bact_a links to Rfam database...	0.47	0.39	0.57	43	59265	34	0	32	2	67
ASE_00038	RNaseP_bact_a links to Rfam database...	0.59	0.53	0.66	54	53546	28	4	24	0	47
ASE_00040	RNaseP_bact_a links to Rfam database...	0.51	0.42	0.62	56	78913	38	0	34	4	77
ASE_00041	RNaseP_bact_a links to Rfam database...	0.69	0.50	0.96	54	57574	4	0	2	2	54
ASE_00042	RNaseP_bact_a links to Rfam database...	0.60	0.51	0.70	74	89994	33	1	31	1	71
ASE_00044	RNaseP_bact_a links to Rfam database...	0.70	0.70	0.72	73	54513	34	3	26	5	32
ASE_00046	RNaseP_bact_a links to Rfam database...	0.67	0.45	1.00	46	50357	1	0	0	1	57
ASE_00047	RNaseP_bact_a links to Rfam database...	0.69	0.52	0.93	67	74233	5	1	4	0	63
ASE_00052	RNaseP_bact_a links to Rfam database...	0.61	0.51	0.72	57	61346	26	0	22	4	55
ASE_00053	RNaseP_bact_a links to Rfam database...	0.67	0.62	0.74	82	79290	31	6	23	2	51
ASE_00056	-	0.49	0.40	0.60	29	30828	25	3	16	6	43
ASE_00057	RNaseP_bact_a links to Rfam database...	0.69	0.59	0.80	79	82116	23	3	17	3	55
ASE_00064	RNaseP_bact_a links to Rfam database...	0.68	0.60	0.77	53	45382	22	3	13	6	36
ASE_00066	RNaseP_bact_a links to Rfam database...	0.78	0.63	0.95	82	72304	4	0	4	0	48
ASE_00068	RNaseP_bact_a links to Rfam database...	0.75	0.60	0.94	51	37621	3	0	3	0	34
ASE_00069	RNaseP_bact_a links to Rfam database...	0.65	0.56	0.76	78	82926	26	4	20	2	62
ASE_00074	RNaseP_bact_a links to Rfam database...	0.49	0.45	0.54	53	67798	45	4	41	0	66
ASE_00075	RNaseP_bact_a links to Rfam database...	0.71	0.61	0.83	99	108691	25	2	19	4	63
ASE_00076	RNaseP_bact_a links to Rfam database...	0.60	0.53	0.68	63	68173	31	3	26	2	55
ASE_00077	RNaseP_bact_a links to Rfam database...	0.68	0.53	0.87	46	45097	12	2	5	5	40
ASE_00078	RNaseP_bact_a links to Rfam database...	0.70	0.57	0.87	47	43017	7	1	6	0	36
ASE_00079	RNaseP_bact_a links to Rfam database...	0.61	0.54	0.68	54	55532	25	2	23	0	46
ASE_00080	RNaseP_bact_a links to Rfam database...	0.41	0.36	0.47	44	71537	54	5	45	4	79
ASE_00081	RNaseP_bact_a links to Rfam database...	0.79	0.71	0.88	69	49692	10	1	8	1	28
ASE_00082	RNaseP_bact_a links to Rfam database...	0.83	0.74	0.93	86	70408	18	0	6	12	30
ASE_00083	RNaseP_bact_a links to Rfam database...	0.77	0.72	0.82	79	62385	22	0	17	5	31
ASE_00084	RNaseP_bact_a links to Rfam database...	0.83	0.74	0.94	73	53550	8	1	4	3	26
ASE_00087	RNaseP_bact_a links to Rfam database...	0.74	0.63	0.87	90	88306	14	2	12	0	54
ASE_00089	-	0.62	0.52	0.73	41	31319	15	2	13	0	38
ASE_00090	RNaseP_bact_a links to Rfam database...	0.66	0.58	0.75	59	55532	20	1	19	0	42
ASE_00092	RNaseP_bact_a links to Rfam database...	0.85	0.78	0.93	88	63451	9	1	6	2	25
ASE_00096	RNaseP_bact_a links to Rfam database...	0.59	0.52	0.67	60	63456	30	3	27	0	55
ASE_00099	RNaseP_bact_a links to Rfam database...	0.80	0.70	0.92	84	64529	7	0	7	0	36
ASE_00100	RNaseP_nuc links to Rfam database...	0.29	0.25	0.33	19	82158	85	2	36	47	57
ASE_00102	RNaseP_bact_a links to Rfam database...	0.72	0.65	0.81	108	117721	29	5	21	3	58
ASE_00104	RNaseP_bact_a links to Rfam database...	0.75	0.66	0.84	79	64167	15	2	13	0	40
ASE_00105	RNaseP_bact_a links to Rfam database...	0.48	0.41	0.56	46	64179	39	6	30	3	65
ASE_00107	RNaseP_bact_a links to Rfam database...	0.73	0.66	0.82	84	73050	19	1	18	0	43
ASE_00108	RNaseP_nuc links to Rfam database...	0.45	0.43	0.47	27	46913	62	5	26	31	36
ASE_00111	RNaseP_nuc links to Rfam database...	0.16	0.14	0.18	8	50041	46	12	25	9	49
ASE_00112	RNaseP_bact_a links to Rfam database...	0.80	0.67	0.95	78	75384	10	1	3	6	38
ASE_00115	RNaseP_bact_a links to Rfam database...	0.74	0.68	0.81	69	54530	23	4	12	7	32
ASE_00116	RNaseP_arch links to Rfam database...	0.32	0.24	0.42	16	31588	25	1	21	3	50
ASE_00118	RNaseP_bact_a links to Rfam database...	0.40	0.37	0.44	38	60639	50	3	46	1	64
ASE_00119	RNaseP_bact_a links to Rfam database...	0.85	0.81	0.91	87	62739	9	1	8	0	21
ASE_00120	RNaseP_arch links to Rfam database...	0.62	0.55	0.69	52	46896	23	7	16	0	42
ASE_00121	RNaseP_arch links to Rfam database...	0.43	0.37	0.51	34	45083	34	4	29	1	58
ASE_00122	RNaseP_bact_a links to Rfam database...	0.73	0.65	0.83	57	43296	12	0	12	0	31
ASE_00123	RNaseP_bact_a links to Rfam database...	0.52	0.49	0.55	42	38427	38	2	32	4	43
ASE_00125	RNaseP_bact_a links to Rfam database...	0.75	0.65	0.86	57	39274	11	0	9	2	31
ASE_00126	RNaseP_bact_a links to Rfam database...	0.65	0.59	0.72	48	40403	25	1	18	6	34
ASE_00128	RNaseP_bact_a links to Rfam database...	0.78	0.65	0.94	65	53232	7	0	4	3	35
ASE_00129	RNaseP_bact_a links to Rfam database...	0.70	0.67	0.74	74	62735	27	5	21	1	37
ASE_00131	RNaseP_bact_a links to Rfam database...	0.80	0.66	0.98	56	39283	5	0	1	4	29
ASE_00132	RNaseP_bact_a links to Rfam database...	0.63	0.48	0.82	46	50347	11	1	9	1	49
ASE_00134	RNaseP_bact_a links to Rfam database...	0.51	0.47	0.55	45	50321	37	4	33	0	50
ASE_00135	RNaseP_bact_a links to Rfam database...	0.67	0.58	0.79	63	63110	22	1	16	5	46
ASE_00136	RNaseP_bact_a links to Rfam database...	0.61	0.52	0.72	48	48138	28	1	18	9	44
ASE_00137	RNaseP_bact_a links to Rfam database...	0.75	0.68	0.82	67	48434	15	0	15	0	31
ASE_00138	RNaseP_bact_a links to Rfam database...	0.58	0.48	0.70	39	40414	17	1	16	0	42
ASE_00139	RNaseP_bact_a links to Rfam database...	0.73	0.63	0.84	66	54206	15	0	13	2	38
ASE_00140	RNaseP_bact_a links to Rfam database...	0.72	0.61	0.85	76	70787	14	3	10	1	49
ASE_00142	RNaseP_bact_a links to Rfam database...	0.73	0.65	0.81	79	67064	19	4	14	1	43
ASE_00145	RNaseP_arch links to Rfam database...	0.63	0.53	0.75	59	70046	24	5	15	4	52
ASE_00146	RNaseP_bact_a links to Rfam database...	0.55	0.43	0.72	53	70802	22	5	16	1	71
ASE_00148	RNaseP_arch links to Rfam database...	0.74	0.69	0.80	106	112443	26	3	23	0	48
ASE_00151	RNaseP_bact_a links to Rfam database...	0.52	0.49	0.55	48	51916	41	9	30	2	50
ASE_00153	RNaseP_nuc links to Rfam database...	0.52	0.51	0.54	37	57562	60	6	25	29	36
ASE_00154	RNaseP_arch links to Rfam database...	0.70	0.64	0.76	68	65252	24	2	19	3	39
ASE_00155	RNaseP_arch links to Rfam database...	0.58	0.52	0.64	74	93412	45	4	38	3	68
ASE_00163	RNaseP_bact_a links to Rfam database...	0.39	0.35	0.43	33	53224	53	4	40	9	60
ASE_00165	RNaseP_bact_a links to Rfam database...	0.65	0.55	0.77	56	52902	18	4	13	1	45
ASE_00168	RNaseP_nuc links to Rfam database...	0.28	0.31	0.26	20	60648	74	18	40	16	44
ASE_00169	RNaseP_bact_a links to Rfam database...	0.52	0.44	0.62	47	57215	30	0	29	1	60
ASE_00170	RNaseP_bact_a links to Rfam database...	0.63	0.55	0.73	51	48758	20	3	16	1	42
ASE_00171	RNaseP_bact_a links to Rfam database...	0.71	0.67	0.76	63	48433	20	4	16	0	31
ASE_00172	RNaseP_bact_a links to Rfam database...	0.81	0.71	0.94	75	58916	5	1	4	0	31
ASE_00174	RNaseP_bact_a links to Rfam database...	0.63	0.60	0.66	65	60977	33	8	25	0	44
ASE_00175	RNaseP_bact_a links to Rfam database...	0.62	0.55	0.70	59	59947	26	2	23	1	48
ASE_00176	RNaseP_bact_a links to Rfam database...	0.45	0.42	0.49	46	59937	50	6	42	2	64
ASE_00179	RNaseP_bact_a links to Rfam database...	0.65	0.56	0.75	47	44190	18	2	14	2	37
ASE_00180	RNaseP_bact_a links to Rfam database...	0.69	0.56	0.85	56	51294	10	2	8	0	44
ASE_00181	RNaseP_bact_a links to Rfam database...	0.60	0.53	0.67	56	57547	31	0	27	4	50
ASE_00182	RNaseP_bact_a links to Rfam database...	0.57	0.53	0.62	72	84139	44	3	41	0	64
ASE_00183	RNaseP_bact_a links to Rfam database...	0.74	0.68	0.81	77	61330	18	0	18	0	36
ASE_00184	RNaseP_bact_a links to Rfam database...	0.71	0.70	0.73	71	54518	26	4	22	0	31
ASE_00185	RNaseP_bact_a links to Rfam database...	0.79	0.69	0.92	88	73440	10	0	8	2	40
ASE_00186	RNaseP_bact_a links to Rfam database...	0.74	0.68	0.81	90	78892	26	1	20	5	42
ASE_00187	RNaseP_arch links to Rfam database...	0.53	0.43	0.65	49	68560	28	2	24	2	66
ASE_00189	RNaseP_bact_b links to Rfam database...	0.72	0.58	0.91	59	63125	8	1	5	2	43
ASE_00190	RNaseP_bact_b links to Rfam database...	0.75	0.58	0.98	52	45398	3	0	1	2	38
ASE_00192	RNaseP_bact_b links to Rfam database...	0.71	0.62	0.80	83	84562	26	2	19	5	50
ASE_00194	RNaseP_bact_b links to Rfam database...	0.53	0.45	0.64	53	73453	34	0	30	4	66
ASE_00195	-	0.70	0.62	0.78	83	86213	27	2	22	3	50
ASE_00196	RNaseP_arch links to Rfam database...	0.76	0.75	0.78	56	31554	20	2	14	4	19
ASE_00197	RNaseP_bact_a links to Rfam database...	0.67	0.57	0.78	83	89147	28	1	22	5	62
ASE_00198	RNaseP_bact_a links to Rfam database...	0.72	0.63	0.83	64	52573	13	2	11	0	38
ASE_00203	RNaseP_bact_a links to Rfam database...	0.77	0.69	0.87	66	46589	10	1	9	0	30
ASE_00204	RNaseP_bact_b links to Rfam database...	0.64	0.45	0.93	50	67842	8	0	4	4	62
ASE_00205	RNaseP_arch links to Rfam database...	0.53	0.49	0.59	44	45981	33	6	25	2	46
ASE_00209	RNaseP_arch links to Rfam database...	0.53	0.49	0.58	43	42997	31	5	26	0	45
ASE_00210	RNaseP_arch links to Rfam database...	0.58	0.58	0.58	38	27195	30	7	21	2	27
ASE_00212	RNaseP_bact_a links to Rfam database...	0.73	0.68	0.79	101	93833	31	3	24	4	47
ASE_00213	RNaseP_arch links to Rfam database...	0.77	0.67	0.90	44	27212	5	1	4	0	22
ASE_00214	RNaseP_bact_a links to Rfam database...	0.80	0.78	0.83	80	56184	23	3	13	7	23
ASE_00215	RNaseP_bact_a links to Rfam database...	0.48	0.41	0.56	41	48443	32	1	31	0	58
ASE_00216	RNaseP_bact_a links to Rfam database...	0.66	0.62	0.70	51	39267	22	3	19	0	31
ASE_00217	RNaseP_bact_a links to Rfam database...	0.34	0.29	0.41	26	40406	39	7	31	1	64
ASE_00221	RNaseP_bact_a links to Rfam database...	0.61	0.46	0.82	54	64554	12	1	11	0	63
ASE_00222	RNaseP_arch links to Rfam database...	0.66	0.62	0.70	98	111961	42	4	38	0	59
ASE_00227	RNaseP_bact_a links to Rfam database...	0.33	0.29	0.37	39	78897	67	5	62	0	94
ASE_00228	RNaseP_bact_a links to Rfam database...	0.78	0.74	0.82	64	46893	16	6	8	2	22
ASE_00229	RNaseP_bact_a links to Rfam database...	0.73	0.63	0.83	55	42420	12	3	8	1	32
ASE_00231	RNaseP_bact_a links to Rfam database...	0.74	0.66	0.83	63	47819	13	3	10	0	33
ASE_00232	RNaseP_bact_a links to Rfam database...	0.80	0.77	0.82	65	38424	14	7	7	0	19
ASE_00234	RNaseP_bact_a links to Rfam database...	0.58	0.49	0.70	63	75376	31	2	25	4	66
ASE_00237	RNaseP_nuc links to Rfam database...	0.00	0.00	0.00	0	45686	81	18	49	14	56
ASE_00238	RNaseP_bact_a links to Rfam database...	0.64	0.54	0.75	62	64178	22	1	20	1	52
ASE_00240	RNaseP_bact_a links to Rfam database...	0.59	0.54	0.64	50	46587	30	1	27	2	43
ASE_00241	RNaseP_bact_a links to Rfam database...	0.72	0.60	0.87	52	43896	8	1	7	0	35
ASE_00242	RNaseP_bact_a links to Rfam database...	0.73	0.59	0.92	66	61003	6	1	5	0	46
ASE_00246	RNaseP_nuc links to Rfam database...	0.38	0.34	0.43	23	48151	40	6	25	9	44
ASE_00247	RNaseP_nuc links to Rfam database...	0.27	0.30	0.25	19	54209	72	17	40	15	45
ASE_00248	RNaseP_bact_a links to Rfam database...	0.71	0.61	0.84	69	62399	15	0	13	2	45
ASE_00250	RNaseP_bact_a links to Rfam database...	0.67	0.53	0.85	69	78922	15	4	8	3	62
ASE_00252	RNaseP_bact_a links to Rfam database...	0.77	0.64	0.92	108	115323	13	0	9	4	60
ASE_00254	RNaseP_bact_a links to Rfam database...	0.76	0.68	0.85	56	36790	15	3	7	5	26
ASE_00255	RNaseP_bact_a links to Rfam database...	0.72	0.62	0.85	80	74597	14	3	11	0	50
ASE_00257	RNaseP_bact_a links to Rfam database...	0.76	0.63	0.91	61	50973	6	1	5	0	36
ASE_00259	RNaseP_bact_a links to Rfam database...	0.60	0.45	0.80	55	73084	16	1	13	2	66
ASE_00263	RNaseP_bact_a links to Rfam database...	0.70	0.62	0.80	74	70407	19	3	16	0	46
ASE_00264	RNaseP_nuc links to Rfam database...	0.53	0.49	0.57	49	49055	45	1	36	8	51
ASE_00267	RNaseP_bact_a links to Rfam database...	0.54	0.42	0.70	37	45097	22	0	16	6	51
ASE_00270	RNaseP_bact_a links to Rfam database...	0.76	0.73	0.79	93	72273	26	1	23	2	35
ASE_00274	RNaseP_bact_a links to Rfam database...	0.64	0.55	0.75	57	55535	19	5	14	0	46
ASE_00277	RNaseP_bact_a links to Rfam database...	0.59	0.53	0.66	48	48132	25	4	21	0	43
ASE_00279	RNaseP_bact_a links to Rfam database...	0.73	0.62	0.86	63	53228	10	3	7	0	38
ASE_00280	RNaseP_bact_a links to Rfam database...	0.70	0.61	0.81	60	51929	15	1	13	1	38
ASE_00281	RNaseP_bact_a links to Rfam database...	0.82	0.74	0.90	65	44479	13	0	7	6	23
ASE_00282	RNaseP_bact_a links to Rfam database...	0.55	0.51	0.60	65	77706	44	6	38	0	62
ASE_00283	RNaseP_bact_a links to Rfam database...	0.77	0.72	0.83	77	61683	16	5	11	0	30
ASE_00284	RNaseP_bact_a links to Rfam database...	0.69	0.68	0.72	73	58209	34	5	24	5	35
ASE_00285	RNaseP_bact_a links to Rfam database...	0.80	0.75	0.86	91	68900	23	3	12	8	31
ASE_00286	RNaseP_bact_a links to Rfam database...	0.67	0.57	0.80	52	46600	17	1	12	4	40
ASE_00287	RNaseP_bact_a links to Rfam database...	0.72	0.69	0.76	71	54853	23	2	20	1	32
ASE_00288	RNaseP_bact_a links to Rfam database...	0.77	0.59	1.00	55	46001	0	0	0	0	38
ASE_00289	RNaseP_bact_a links to Rfam database...	0.79	0.69	0.90	109	100904	15	5	7	3	48
ASE_00291	-	0.52	0.48	0.56	45	48436	36	7	28	1	49
ASE_00292	RNaseP_bact_a links to Rfam database...	0.68	0.60	0.76	83	81701	27	2	24	1	55
ASE_00294	RNaseP_bact_a links to Rfam database...	0.78	0.68	0.90	117	114351	14	1	12	1	54
ASE_00295	RNaseP_bact_a links to Rfam database...	0.72	0.63	0.84	82	73822	16	3	13	0	49
ASE_00296	RNaseP_bact_a links to Rfam database...	0.48	0.43	0.53	63	91688	56	5	50	1	82
ASE_00297	RNaseP_bact_a links to Rfam database...	0.68	0.62	0.74	61	52893	21	3	18	0	37
ASE_00298	RNaseP_bact_a links to Rfam database...	0.57	0.51	0.64	58	67438	34	1	31	2	55
ASE_00299	RNaseP_bact_a links to Rfam database...	0.63	0.56	0.72	56	49377	27	1	21	5	44
ASE_00313	RNaseP_nuc links to Rfam database...	0.69	0.66	0.71	59	62398	44	4	20	20	30
ASE_00316	RNaseP_nuc links to Rfam database...	0.78	0.63	0.97	62	107816	35	0	2	33	36
ASE_00318	RNaseP_bact_b links to Rfam database...	0.52	0.43	0.64	51	80120	32	4	25	3	67
ASE_00327	RNaseP_nuc links to Rfam database...	0.74	0.72	0.76	64	57207	25	6	14	5	25
ASE_00328	RNaseP_bact_b links to Rfam database...	0.70	0.60	0.83	67	72690	20	4	10	6	45
ASE_00330	RNaseP_nuc links to Rfam database...	0.75	0.71	0.79	64	56199	35	0	17	18	26
ASE_00332	RNaseP_bact_a links to Rfam database...	0.55	0.50	0.60	69	81695	47	2	44	1	69
ASE_00335	RNaseP_bact_b links to Rfam database...	0.68	0.59	0.78	68	75379	25	2	17	6	48
ASE_00337	RNaseP_nuc links to Rfam database...	0.60	0.59	0.62	42	39272	39	5	21	13	29
ASE_00338	RNaseP_nuc links to Rfam database...	0.77	0.68	0.87	67	66353	26	3	7	16	31
ASE_00339	RNaseP_bact_a links to Rfam database...	0.72	0.63	0.82	75	80108	26	0	17	9	44
ASE_00340	RNaseP_bact_a links to Rfam database...	0.76	0.75	0.77	64	45973	25	8	11	6	21
ASE_00342	RNaseP_bact_a links to Rfam database...	0.75	0.68	0.83	78	62387	17	1	15	1	37
ASE_00343	RNaseP_bact_a links to Rfam database...	0.77	0.67	0.87	76	83349	21	0	11	10	37
ASE_00346	RNaseP_arch links to Rfam database...	0.37	0.34	0.40	33	48123	51	3	46	2	64
ASE_00353	RNaseP_bact_a links to Rfam database...	0.57	0.51	0.63	55	57882	35	4	29	2	52
ASE_00359	RNaseP_arch links to Rfam database...	0.51	0.43	0.61	34	42722	22	3	19	0	46
ASE_00360	RNaseP_arch links to Rfam database...	0.50	0.45	0.57	29	29352	22	3	19	0	36
ASE_00361	RNaseP_bact_a links to Rfam database...	0.53	0.47	0.59	60	75364	45	9	33	3	67
ASE_00362	RNaseP_bact_a links to Rfam database...	0.66	0.59	0.74	54	48132	20	2	17	1	37
ASE_00363	RNaseP_bact_a links to Rfam database...	0.76	0.64	0.91	60	51294	7	0	6	1	34
ASE_00364	RNaseP_bact_a links to Rfam database...	0.63	0.56	0.70	59	54201	25	3	22	0	46
ASE_00366	RNaseP_bact_a links to Rfam database...	0.54	0.51	0.58	50	58567	36	5	31	0	48
ASE_00367	RNaseP_bact_a links to Rfam database...	0.62	0.55	0.71	47	43005	23	5	14	4	39
ASE_00369	RNaseP_bact_a links to Rfam database...	0.73	0.71	0.75	76	55843	27	0	26	1	31
ASE_00370	RNaseP_bact_a links to Rfam database...	0.49	0.43	0.55	36	41840	29	1	28	0	48
ASE_00372	RNaseP_bact_a links to Rfam database...	0.74	0.68	0.80	68	51918	20	3	14	3	32
ASE_00374	RNaseP_bact_a links to Rfam database...	0.64	0.61	0.68	54	44770	26	5	21	0	34
ASE_00375	RNaseP_bact_a links to Rfam database...	0.79	0.70	0.89	77	60291	10	1	9	0	33
ASE_00376	RNaseP_bact_a links to Rfam database...	0.62	0.57	0.68	60	56865	30	5	23	2	45
ASE_00377	RNaseP_bact_a links to Rfam database...	0.77	0.74	0.81	79	57532	24	3	16	5	28
ASE_00379	RNaseP_bact_a links to Rfam database...	0.70	0.62	0.79	55	45986	16	5	10	1	34
ASE_00380	RNaseP_bact_a links to Rfam database...	0.54	0.49	0.59	49	54863	35	4	30	1	50
ASE_00382	RNaseP_bact_a links to Rfam database...	0.69	0.58	0.82	49	41845	14	5	6	3	35
ASE_00383	RNaseP_bact_a links to Rfam database...	0.71	0.64	0.80	67	54531	19	5	12	2	38
ASE_00384	RNaseP_bact_a links to Rfam database...	0.73	0.71	0.76	65	48430	25	1	20	4	27
ASE_00385	RNaseP_bact_a links to Rfam database...	0.63	0.56	0.73	45	41843	17	7	10	0	36
ASE_00386	RNaseP_bact_a links to Rfam database...	0.65	0.60	0.70	58	50320	30	1	24	5	38
ASE_00387	RNaseP_bact_a links to Rfam database...	0.75	0.65	0.86	68	55866	13	1	10	2	36
ASE_00388	RNaseP_bact_a links to Rfam database...	0.74	0.61	0.90	54	45693	7	0	6	1	35
ASE_00390	RNaseP_bact_a links to Rfam database...	0.77	0.71	0.85	60	42124	18	0	11	7	25
ASE_00393	RNaseP_bact_a links to Rfam database...	0.72	0.65	0.81	60	47821	15	0	14	1	33
ASE_00394	RNaseP_bact_a links to Rfam database...	0.80	0.76	0.85	71	46887	14	3	10	1	22
ASE_00395	RNaseP_bact_a links to Rfam database...	0.77	0.73	0.81	61	41541	14	2	12	0	23
ASE_00396	RNaseP_bact_a links to Rfam database...	0.68	0.61	0.76	51	41549	18	5	11	2	32
ASE_00397	RNaseP_bact_a links to Rfam database...	0.81	0.72	0.92	76	54532	7	2	5	0	29
ASE_00398	RNaseP_bact_a links to Rfam database...	0.65	0.59	0.72	61	55860	25	1	23	1	43
ASE_00400	RNaseP_bact_a links to Rfam database...	0.74	0.65	0.83	69	57887	15	1	13	1	37
ASE_00401	RNaseP_bact_a links to Rfam database...	0.64	0.60	0.68	75	76918	35	5	30	0	51
ASE_00402	RNaseP_bact_a links to Rfam database...	0.68	0.60	0.77	51	42420	15	4	11	0	34
ASE_00403	RNaseP_bact_a links to Rfam database...	0.57	0.47	0.69	50	55873	22	0	22	0	57
ASE_00404	RNaseP_bact_a links to Rfam database...	0.58	0.51	0.66	43	43006	22	1	21	0	42
ASE_00406	RNaseP_bact_a links to Rfam database...	0.74	0.64	0.87	60	48759	11	0	9	2	34
ASE_00408	-	0.71	0.61	0.84	43	32334	8	1	7	0	28
ASE_00409	-	0.54	0.46	0.63	38	40981	22	0	22	0	45
ASE_00411	RNaseP_bact_a links to Rfam database...	0.59	0.46	0.75	41	49400	15	5	9	1	48
ASE_00412	RNaseP_bact_a links to Rfam database...	0.56	0.47	0.67	49	58238	24	7	17	0	56
ASE_00413	RNaseP_bact_a links to Rfam database...	0.47	0.46	0.49	37	44475	42	5	34	3	44
ASE_00414	RNaseP_bact_a links to Rfam database...	0.46	0.40	0.52	38	46287	42	2	33	7	57
ASE_00415	RNaseP_bact_a links to Rfam database...	0.70	0.65	0.74	67	54856	28	1	22	5	36
ASE_00416	RNaseP_bact_a links to Rfam database...	0.71	0.60	0.84	76	77330	20	0	15	5	51
ASE_00417	RNaseP_arch links to Rfam database...	0.43	0.41	0.46	41	54525	53	4	45	4	59
ASE_00418	RNaseP_arch links to Rfam database...	0.20	0.19	0.21	14	38714	55	2	51	2	61
ASE_00419	RNaseP_bact_a links to Rfam database...	0.78	0.74	0.83	76	54854	17	3	13	1	27
ASE_00422	RNaseP_bact_a links to Rfam database...	0.69	0.65	0.74	61	46889	26	6	15	5	33
ASE_00423	RNaseP_bact_a links to Rfam database...	0.65	0.64	0.66	70	56847	36	6	30	0	39
ASE_00426	RNaseP_bact_a links to Rfam database...	0.59	0.52	0.68	56	60993	26	1	25	0	52
ASE_00428	RNaseP_bact_a links to Rfam database...	0.65	0.59	0.72	74	76533	33	2	27	4	51
ASE_00429	-	0.59	0.56	0.62	37	28143	24	6	17	1	29
ASE_00430	RNaseP_bact_a links to Rfam database...	0.76	0.68	0.85	66	46893	17	3	9	5	31
ASE_00431	RNaseP_bact_a links to Rfam database...	0.71	0.61	0.82	58	46289	18	1	12	5	37
ASE_00434	RNaseP_bact_b links to Rfam database...	0.70	0.60	0.81	66	68184	23	3	12	8	44
ASE_00437	RNaseP_bact_a links to Rfam database...	0.55	0.41	0.74	56	79325	20	0	20	0	79
ASE_00438	RNaseP_bact_a links to Rfam database...	0.69	0.59	0.79	69	65979	18	0	18	0	47
ASE_00441	RNaseP_bact_a links to Rfam database...	0.79	0.72	0.86	81	64167	15	2	11	2	31
ASE_00447	RNaseP_bact_a links to Rfam database...	0.67	0.59	0.77	68	60290	25	0	20	5	48
ASE_00448	RNaseP_bact_a links to Rfam database...	0.53	0.42	0.66	47	64190	30	4	20	6	65
ASE_00451	RNaseP_bact_a links to Rfam database...	0.75	0.66	0.85	82	70780	14	2	12	0	43
CRW_00004	-	0.64	0.63	0.65	82	154163	71	6	39	26	49
CRW_00005	-	0.66	0.65	0.68	86	137948	63	6	35	22	46
CRW_00007	-	0.49	0.48	0.49	64	144861	71	26	40	5	69
CRW_00009	-	0.54	0.54	0.55	74	137940	80	8	53	19	64
CRW_00010	-	0.80	0.78	0.82	98	102711	35	8	14	13	28
CRW_00011	-	0.79	0.79	0.79	109	118203	45	6	23	16	29
CRW_00012	-	0.51	0.47	0.55	66	147033	60	16	38	6	75
CRW_00013	Intron_gpI links to Rfam database...	0.33	0.26	0.42	30	103669	55	7	34	14	85
CRW_00014	-	0.44	0.41	0.47	51	103631	69	9	49	11	72
CRW_00016	Intron_gpI links to Rfam database...	0.75	0.67	0.83	80	77325	26	6	10	10	40
CRW_00017	-	0.73	0.70	0.76	64	92151	32	5	15	12	27
CRW_00018	-	0.66	0.64	0.69	77	182598	78	10	25	43	44
CRW_00019	-	0.79	0.75	0.82	103	127640	46	4	18	24	34
CRW_00423	-	0.28	0.19	0.42	36	242470	55	5	45	5	153
CRW_00429	-	0.26	0.19	0.35	44	306809	86	9	74	3	189
CRW_00605	-	0.86	0.77	0.96	54	183865	94	2	0	92	16
CRW_00608	-	0.80	0.76	0.83	60	35706	23	0	12	11	19
CRW_00610	Intron_gpI links to Rfam database...	0.61	0.54	0.68	44	36250	21	6	15	0	37
CRW_00611	-	0.78	0.72	0.84	54	31311	18	0	10	8	21
CRW_00612	-	0.70	0.66	0.75	61	270399	153	0	20	133	32
CRW_00613	Intron_gpI links to Rfam database...	0.86	0.78	0.94	61	34915	13	1	3	9	17
CRW_00614	Intron_gpI links to Rfam database...	0.13	0.14	0.13	8	121707	95	15	41	39	49
CRW_00618	Intron_gpI links to Rfam database...	0.25	0.25	0.26	15	56223	56	5	37	14	46
CRW_00619	Intron_gpI links to Rfam database...	0.42	0.30	0.58	22	164987	82	4	12	66	51
CRW_00620	Intron_gpI links to Rfam database...	0.20	0.21	0.19	13	150907	93	14	41	38	50
CRW_00621	Intron_gpI links to Rfam database...	0.35	0.31	0.39	22	153125	120	4	30	86	49
CRW_00623	Intron_gpI links to Rfam database...	0.30	0.23	0.39	19	129746	89	5	25	59	64
CRW_00626	-	0.74	0.72	0.75	75	100925	49	11	14	24	29
CRW_00629	-	0.62	0.60	0.65	73	91265	42	14	26	2	49
CRW_00632	-	0.70	0.69	0.71	88	82904	42	2	34	6	40
CRW_00633	Intron_gpI links to Rfam database...	0.64	0.58	0.72	61	63461	25	5	19	1	45
CRW_00634	Intron_gpI links to Rfam database...	0.60	0.56	0.65	53	64538	30	10	19	1	41
CRW_00635	-	0.48	0.45	0.52	61	109161	65	9	47	9	76
CRW_00636	-	0.56	0.53	0.60	76	114833	57	8	43	6	67
CRW_00637	-	0.45	0.41	0.49	65	133770	69	7	61	1	93
CRW_00639	-	0.66	0.66	0.67	91	126620	48	14	31	3	47
CRW_00641	-	0.75	0.75	0.75	57	39827	24	5	14	5	19
CRW_00642	-	0.48	0.52	0.44	34	47200	54	10	34	10	31
CRW_00643	-	0.40	0.43	0.38	52	123118	90	23	63	4	70
CRW_00645	-	0.61	0.61	0.61	41	35444	32	2	24	6	26
CRW_00646	-	0.60	0.56	0.63	36	34923	24	4	17	3	28
CRW_00648	-	0.73	0.68	0.79	101	137947	37	9	18	10	47
CRW_00649	-	0.82	0.79	0.86	98	204366	90	5	11	74	26
CRW_00650	-	0.64	0.58	0.69	83	112930	41	2	35	4	59
CRW_00651	-	0.69	0.69	0.68	84	100004	41	13	27	1	37
CRW_00652	-	0.67	0.68	0.66	88	132222	56	13	32	11	42
CRW_00653	-	0.86	0.83	0.89	111	94705	18	3	11	4	23
CRW_00654	-	0.86	0.77	0.96	96	78110	6	0	4	2	28
CRW_00655	-	0.88	0.85	0.91	106	89136	13	2	9	2	18
CRW_00656	-	0.55	0.50	0.62	64	90421	45	7	33	5	65
CRW_00657	-	0.85	0.79	0.92	107	105914	16	2	7	7	29
CRW_00658	-	0.59	0.58	0.60	59	74593	42	16	23	3	43
CRW_00659	-	0.41	0.44	0.38	27	32314	47	14	30	3	34
CRW_00660	-	0.50	0.47	0.53	28	22102	26	3	22	1	32
CRW_00661	-	0.10	0.10	0.11	5	24263	44	18	24	2	46
CRW_00662	-	0.34	0.31	0.37	20	28626	41	3	31	7	45
CRW_00663	-	0.03	0.03	0.04	2	26056	49	8	40	1	59
CRW_00664	-	0.21	0.21	0.23	16	53557	58	9	46	3	62
CRW_00665	-	0.05	0.04	0.05	2	23616	35	11	24	0	46
CRW_00666	-	0.63	0.59	0.68	74	96032	37	10	25	2	52
CRW_00668	-	0.68	0.66	0.70	99	163736	56	12	31	13	51
CRW_00669	-	0.61	0.58	0.64	69	97354	38	15	23	0	50
CRW_00670	Intron_gpI links to Rfam database...	0.83	0.78	0.87	94	70017	14	6	8	0	26
CRW_00671	Intron_gpI links to Rfam database...	0.82	0.74	0.92	86	62742	8	1	6	1	31
CRW_00672	Intron_gpI links to Rfam database...	0.76	0.72	0.80	80	72290	24	8	12	4	31
CRW_00673	-	0.75	0.74	0.75	78	100024	34	16	10	8	27
CRW_00674	Intron_gpI links to Rfam database...	0.75	0.69	0.83	85	83333	20	7	11	2	39
CRW_00676	Intron_gpI links to Rfam database...	0.47	0.44	0.51	51	93428	52	14	35	3	64
CRW_00677	-	0.61	0.60	0.63	63	71910	38	12	25	1	42
CRW_00679	-	0.35	0.35	0.35	37	76531	70	14	54	2	70
CRW_00681	-	0.65	0.64	0.67	72	112942	51	14	22	15	40
CRW_00685	-	0.60	0.58	0.63	61	156983	60	15	21	24	45
CRW_00686	-	0.59	0.58	0.59	73	95142	59	7	44	8	52
CRW_00687	-	0.62	0.62	0.62	41	28614	28	9	16	3	25
CRW_00688	-	0.83	0.81	0.85	46	21891	9	3	5	1	11
CRW_00689	-	0.70	0.71	0.70	55	33591	25	8	16	1	22
CRW_00690	-	0.75	0.71	0.79	49	33349	18	5	8	5	20
CRW_00691	-	0.73	0.69	0.78	46	27202	16	1	12	3	21
CRW_00692	Intron_gpI links to Rfam database...	0.56	0.47	0.68	42	68573	21	7	13	1	48
CRW_00693	-	0.72	0.71	0.72	87	89132	46	5	29	12	35
CRW_00694	-	0.72	0.70	0.74	86	85789	34	6	24	4	36
CRW_00699	-	0.71	0.65	0.77	82	91699	28	2	23	3	44
CRW_00700	-	0.75	0.71	0.78	105	180766	52	4	26	22	42
CRW_00703	-	0.59	0.55	0.63	36	40413	27	4	17	6	30
CRW_00714	-	0.80	0.71	0.89	76	186270	62	3	6	53	31
CRW_00715	-	0.79	0.75	0.84	78	69285	18	3	12	3	26
CRW_00716	-	0.83	0.72	0.96	64	193686	62	1	2	59	25
CRW_00717	-	0.71	0.57	0.89	85	153639	25	4	7	14	63
CRW_00718	-	0.73	0.59	0.90	113	189911	28	1	11	16	78
CRW_00719	-	0.69	0.57	0.83	52	230118	87	3	8	76	39
CRW_00720	-	0.50	0.44	0.58	40	208266	82	4	25	53	51
CRW_00721	-	0.73	0.62	0.86	42	58604	21	1	6	14	26
CRW_00764	-	0.10	0.06	0.16	12	253040	65	15	49	1	184
CRW_00775	-	0.19	0.08	0.41	18	314777	26	8	18	0	194
CRW_00815	-	0.70	0.66	0.75	104	159756	37	5	30	2	54
CRW_00816	-	0.48	0.44	0.53	57	143808	60	10	41	9	72
CRW_00820	-	0.72	0.63	0.82	92	136391	27	2	18	7	53
PDB_00072	-	0.50	0.51	0.49	107	148022	111	24	87	0	103
PDB_00078	-	0.54	0.52	0.57	60	49664	46	5	41	0	55
PDB_00079	-	0.77	0.70	0.85	100	121653	46	7	11	28	42
PDB_00278	-	0.42	0.38	0.48	27	24920	29	1	28	0	45
PDB_00403	-	0.57	0.55	0.60	84	124610	64	15	41	8	69
PDB_00423	-	0.55	0.50	0.61	37	26735	24	4	20	0	37
PDB_00701	-	0.38	0.37	0.39	40	45348	63	9	54	0	69
PDB_00747	-	0.82	0.71	0.95	57	24471	3	0	3	0	23
PDB_00827	Intron_gpI links to Rfam database...	0.79	0.65	0.95	53	26972	5	0	3	2	28
PDB_00917	-	0.58	0.54	0.64	51	35165	34	2	27	5	44
PDB_00919	RNaseP_bact_a links to Rfam database...	0.53	0.47	0.62	48	44175	34	2	28	4	55
PDB_01129	-	0.28	0.28	0.28	20	35439	57	12	40	5	51
PDB_01157	-	0.25	0.22	0.29	22	50009	55	10	45	0	76
PDB_01166	-	0.51	0.48	0.54	101	181918	91	20	67	4	111
RFA_00597	Telomerase-vert links to Rfam database...	0.52	0.50	0.55	54	97804	55	4	41	10	55
RFA_00598	Telomerase-vert links to Rfam database...	0.49	0.48	0.51	48	84572	68	5	41	22	53
RFA_00599	Telomerase-vert links to Rfam database...	0.75	0.73	0.77	81	101370	40	8	16	16	30
RFA_00600	Telomerase-vert links to Rfam database...	0.22	0.22	0.21	22	120191	99	29	53	17	78
RFA_00601	Telomerase-vert links to Rfam database...	0.45	0.46	0.43	53	99113	82	25	44	13	61
RFA_00602	Telomerase-vert links to Rfam database...	0.42	0.43	0.40	50	101351	83	20	54	9	66
TMR_00007	tmRNA links to Rfam database...	0.50	0.46	0.54	50	61684	47	9	33	5	58
TMR_00008	tmRNA links to Rfam database...	0.66	0.59	0.72	63	65979	32	6	18	8	43
TMR_00010	tmRNA links to Rfam database...	0.32	0.29	0.35	28	57891	56	8	43	5	68
TMR_00012	tmRNA links to Rfam database...	0.43	0.36	0.51	29	64563	43	9	19	15	52
TMR_00014	tmRNA links to Rfam database...	0.70	0.69	0.71	76	68528	38	14	17	7	34
TMR_00017	tmRNA links to Rfam database...	0.70	0.55	0.89	56	67098	11	0	7	4	46
TMR_00018	tmRNA links to Rfam database...	0.40	0.33	0.48	30	64558	36	6	26	4	62
TMR_00028	tmRNA links to Rfam database...	0.74	0.72	0.76	70	62743	26	4	18	4	27
TMR_00030	tmRNA links to Rfam database...	0.48	0.40	0.59	44	75780	34	6	25	3	67
TMR_00034	tmRNA links to Rfam database...	0.67	0.65	0.69	72	59927	38	6	26	6	38
TMR_00035	tmRNA links to Rfam database...	0.63	0.55	0.71	54	67820	27	9	13	5	44
TMR_00036	tmRNA links to Rfam database...	0.65	0.59	0.71	60	90441	51	6	18	27	41
TMR_00038	tmRNA links to Rfam database...	0.23	0.21	0.25	23	71161	75	9	60	6	87
TMR_00042	tmRNA links to Rfam database...	0.38	0.34	0.44	33	62760	45	2	40	3	65
TMR_00046	tmRNA links to Rfam database...	0.50	0.48	0.53	46	62748	45	5	36	4	50
TMR_00047	tmRNA links to Rfam database...	0.38	0.33	0.43	19	48472	40	6	19	15	38
TMR_00048	tmRNA links to Rfam database...	0.49	0.48	0.50	46	64888	54	6	40	8	49
TMR_00049	tmRNA links to Rfam database...	0.60	0.52	0.70	45	63126	29	3	16	10	42
TMR_00051	tmRNA links to Rfam database...	0.73	0.63	0.86	59	65634	28	0	10	18	35
TMR_00055	tmRNA links to Rfam database...	0.39	0.33	0.45	38	78918	47	12	35	0	76
TMR_00057	tmRNA links to Rfam database...	0.19	0.18	0.20	14	73850	65	14	42	9	65
TMR_00061	tmRNA links to Rfam database...	0.30	0.27	0.33	27	59602	63	10	46	7	72
TMR_00062	tmRNA links to Rfam database...	0.67	0.63	0.71	65	78515	36	6	20	10	39
TMR_00064	tmRNA links to Rfam database...	0.56	0.48	0.65	49	76953	26	12	14	0	54
TMR_00065	tmRNA links to Rfam database...	0.58	0.48	0.70	51	76563	23	8	14	1	55
TMR_00067	tmRNA links to Rfam database...	0.48	0.44	0.54	50	82122	51	5	38	8	64
TMR_00073	tmRNA links to Rfam database...	0.68	0.60	0.77	70	65612	22	5	16	1	47
TMR_00076	tmRNA links to Rfam database...	0.59	0.49	0.70	49	70806	27	8	13	6	51
TMR_00080	tmRNA links to Rfam database...	0.65	0.60	0.70	58	70417	26	6	19	1	38
TMR_00081	tmRNA links to Rfam database...	0.68	0.58	0.79	62	67083	17	3	13	1	44
TMR_00082	tmRNA links to Rfam database...	0.78	0.77	0.80	74	67803	24	8	11	5	22
TMR_00083	tmRNA links to Rfam database...	0.63	0.62	0.64	65	68163	39	11	26	2	40
TMR_00092	tmRNA links to Rfam database...	0.65	0.65	0.64	66	67425	41	9	28	4	35
TMR_00093	tmRNA links to Rfam database...	0.59	0.54	0.64	55	64175	34	8	23	3	47
TMR_00096	tmRNA links to Rfam database...	0.64	0.61	0.68	61	64890	34	10	19	5	39
TMR_00101	tmRNA links to Rfam database...	0.54	0.49	0.61	52	64176	35	7	26	2	55
TMR_00102	tmRNA links to Rfam database...	0.31	0.29	0.34	29	64176	60	10	46	4	72
TMR_00103	tmRNA links to Rfam database...	0.64	0.61	0.68	66	64164	32	7	24	1	42
TMR_00104	-	0.21	0.21	0.21	15	66725	62	26	29	7	55
TMR_00106	tmRNA links to Rfam database...	0.59	0.53	0.67	63	90006	34	10	21	3	57
TMR_00109	tmRNA links to Rfam database...	0.51	0.48	0.56	58	88306	51	13	33	5	64
TMR_00111	tmRNA links to Rfam database...	0.58	0.52	0.64	63	90427	39	2	33	4	59
TMR_00116	tmRNA links to Rfam database...	0.81	0.73	0.90	76	64896	21	2	6	13	28
TMR_00117	tmRNA links to Rfam database...	0.81	0.76	0.86	90	80095	24	6	9	9	28
TMR_00118	tmRNA links to Rfam database...	0.56	0.52	0.60	62	81303	48	1	40	7	58
TMR_00119	tmRNA links to Rfam database...	0.72	0.63	0.83	65	71932	18	2	11	5	39
TMR_00123	tmRNA links to Rfam database...	0.85	0.77	0.93	78	66346	11	0	6	5	23
TMR_00124	tmRNA links to Rfam database...	0.65	0.62	0.68	61	70410	39	12	17	10	37
TMR_00125	tmRNA links to Rfam database...	0.61	0.57	0.67	56	64177	32	9	19	4	43
TMR_00127	tmRNA links to Rfam database...	0.70	0.68	0.72	66	62743	33	2	24	7	31
TMR_00128	tmRNA links to Rfam database...	0.52	0.54	0.51	52	60973	50	14	36	0	44
TMR_00131	tmRNA links to Rfam database...	0.60	0.49	0.72	49	64912	26	3	16	7	50
TMR_00135	tmRNA links to Rfam database...	0.66	0.60	0.73	59	62754	28	5	17	6	40
TMR_00136	tmRNA links to Rfam database...	0.32	0.30	0.36	30	74607	57	13	41	3	71
TMR_00137	tmRNA links to Rfam database...	0.34	0.28	0.40	25	61013	45	6	31	8	64
TMR_00139	tmRNA links to Rfam database...	0.59	0.62	0.57	56	62029	52	19	24	9	35
TMR_00140	tmRNA links to Rfam database...	0.56	0.52	0.61	52	73835	49	3	30	16	48
TMR_00142	tmRNA links to Rfam database...	0.65	0.63	0.67	64	70780	39	9	23	7	38
TMR_00143	tmRNA links to Rfam database...	0.48	0.46	0.51	47	64528	55	7	38	10	56
TMR_00144	tmRNA links to Rfam database...	0.46	0.45	0.48	46	74209	50	10	40	0	57
TMR_00146	tmRNA links to Rfam database...	0.85	0.88	0.82	37	32086	28	4	4	20	5
TMR_00150	tmRNA links to Rfam database...	0.77	0.71	0.83	30	43035	31	3	3	25	12
TMR_00152	tmRNA links to Rfam database...	0.38	0.30	0.48	35	81333	45	6	32	7	80
TMR_00155	tmRNA links to Rfam database...	0.72	0.64	0.81	67	61693	25	2	14	9	37
TMR_00156	tmRNA links to Rfam database...	0.68	0.63	0.73	61	60294	29	3	20	6	36
TMR_00158	tmRNA links to Rfam database...	0.57	0.51	0.64	50	60648	32	2	26	4	49
TMR_00159	tmRNA links to Rfam database...	0.65	0.57	0.74	52	62058	24	2	16	6	40
TMR_00160	tmRNA links to Rfam database...	0.45	0.42	0.48	40	64537	49	8	35	6	55
TMR_00164	tmRNA links to Rfam database...	0.41	0.36	0.47	38	66714	51	6	37	8	68
TMR_00165	tmRNA links to Rfam database...	0.61	0.48	0.76	47	61714	22	6	9	7	50
TMR_00166	tmRNA links to Rfam database...	0.46	0.38	0.58	38	61710	34	1	27	6	63
TMR_00168	tmRNA links to Rfam database...	0.74	0.69	0.78	79	60974	25	0	22	3	35
TMR_00173	tmRNA links to Rfam database...	0.50	0.40	0.63	17	42168	32	2	8	22	25
TMR_00179	tmRNA links to Rfam database...	0.68	0.64	0.72	63	67073	33	5	20	8	35
TMR_00180	tmRNA links to Rfam database...	0.69	0.66	0.73	65	67072	36	5	19	12	34
TMR_00182	tmRNA links to Rfam database...	0.52	0.46	0.59	47	66350	38	4	29	5	55
TMR_00183	tmRNA links to Rfam database...	0.29	0.26	0.33	27	63109	59	7	47	5	76
TMR_00184	tmRNA links to Rfam database...	0.47	0.43	0.51	44	63103	51	3	40	8	58
TMR_00193	tmRNA links to Rfam database...	0.49	0.43	0.56	34	59279	36	7	20	9	46
TMR_00194	tmRNA links to Rfam database...	0.66	0.58	0.75	54	62763	26	3	15	8	39
TMR_00196	tmRNA links to Rfam database...	0.47	0.40	0.54	39	61003	38	8	25	5	58
TMR_00199	tmRNA links to Rfam database...	0.60	0.60	0.60	55	62743	44	16	21	7	37
TMR_00200	-	0.61	0.48	0.77	36	41569	21	5	6	10	39
TMR_00204	tmRNA links to Rfam database...	0.49	0.45	0.52	44	60294	46	14	26	6	53
TMR_00207	tmRNA links to Rfam database...	0.47	0.40	0.56	41	72317	36	3	29	4	62
TMR_00223	tmRNA links to Rfam database...	0.49	0.45	0.54	43	64181	41	9	28	4	52
TMR_00224	tmRNA links to Rfam database...	0.50	0.39	0.64	39	64919	27	4	18	5	62
TMR_00226	tmRNA links to Rfam database...	0.49	0.46	0.52	48	69659	50	12	32	6	57
TMR_00227	tmRNA links to Rfam database...	0.58	0.55	0.62	56	70034	38	8	27	3	45
TMR_00228	tmRNA links to Rfam database...	0.32	0.31	0.32	34	88305	76	20	51	5	74
TMR_00234	tmRNA links to Rfam database...	0.62	0.55	0.70	56	58916	25	2	22	1	46
TMR_00238	tmRNA links to Rfam database...	0.32	0.30	0.35	30	84580	62	12	44	6	71
TMR_00239	tmRNA links to Rfam database...	0.54	0.53	0.55	51	61683	44	9	33	2	45
TMR_00240	tmRNA links to Rfam database...	0.62	0.58	0.67	49	63117	30	10	14	6	36
TMR_00246	-	0.44	0.41	0.47	14	78180	75	0	16	59	20
TMR_00248	tmRNA links to Rfam database...	0.27	0.32	0.24	12	54235	58	17	21	20	26
TMR_00257	tmRNA links to Rfam database...	0.63	0.50	0.80	49	67100	18	2	10	6	49
TMR_00259	tmRNA links to Rfam database...	0.56	0.56	0.56	58	67793	48	13	32	3	45
TMR_00261	tmRNA links to Rfam database...	0.62	0.59	0.65	60	66702	37	10	23	4	41
TMR_00262	tmRNA links to Rfam database...	0.65	0.60	0.71	62	74218	25	14	11	0	42
TMR_00271	tmRNA links to Rfam database...	0.62	0.56	0.68	51	64186	35	6	18	11	40
TMR_00274	tmRNA links to Rfam database...	0.73	0.71	0.75	75	66695	32	7	18	7	30
TMR_00278	tmRNA links to Rfam database...	0.46	0.44	0.49	45	67804	55	1	46	8	57
TMR_00279	tmRNA links to Rfam database...	0.55	0.53	0.57	50	68919	47	6	31	10	44
TMR_00280	tmRNA links to Rfam database...	0.65	0.62	0.68	63	65973	44	4	26	14	38
TMR_00283	tmRNA links to Rfam database...	0.62	0.48	0.79	46	65283	22	1	11	10	50
TMR_00289	tmRNA links to Rfam database...	0.62	0.57	0.68	56	67079	38	2	24	12	42
TMR_00290	tmRNA links to Rfam database...	0.49	0.48	0.51	44	64175	51	3	39	9	48
TMR_00296	tmRNA links to Rfam database...	0.35	0.33	0.38	32	68922	57	10	42	5	66
TMR_00298	tmRNA links to Rfam database...	0.61	0.55	0.68	56	68183	33	6	20	7	45
TMR_00300	tmRNA links to Rfam database...	0.65	0.62	0.70	69	70401	40	8	22	10	43
TMR_00301	tmRNA links to Rfam database...	0.53	0.42	0.67	40	82155	35	6	14	15	56
TMR_00302	tmRNA links to Rfam database...	0.45	0.43	0.49	40	77339	48	12	30	6	54
TMR_00305	tmRNA links to Rfam database...	0.65	0.57	0.73	58	60996	28	3	18	7	44
TMR_00306	tmRNA links to Rfam database...	0.59	0.58	0.60	61	64160	42	3	37	2	45
TMR_00310	tmRNA links to Rfam database...	0.71	0.68	0.74	67	63813	27	7	16	4	31
TMR_00317	tmRNA links to Rfam database...	0.65	0.60	0.71	61	68179	28	4	21	3	41
TMR_00331	tmRNA links to Rfam database...	0.48	0.46	0.50	38	66719	47	3	35	9	44
TMR_00332	tmRNA links to Rfam database...	0.61	0.46	0.81	46	67104	16	0	11	5	53
TMR_00334	tmRNA links to Rfam database...	0.57	0.49	0.67	49	66722	29	4	20	5	52
TMR_00337	tmRNA links to Rfam database...	0.69	0.66	0.71	79	82917	36	11	21	4	40
TMR_00340	tmRNA links to Rfam database...	0.49	0.38	0.63	31	64212	36	3	15	18	50
TMR_00341	tmRNA links to Rfam database...	0.40	0.37	0.44	34	63112	51	12	32	7	58
TMR_00343	tmRNA links to Rfam database...	0.52	0.47	0.58	49	64896	43	5	30	8	56
TMR_00345	tmRNA links to Rfam database...	0.73	0.68	0.79	71	63813	26	3	16	7	33
TMR_00346	tmRNA links to Rfam database...	0.56	0.54	0.58	51	64173	37	14	23	0	43
TMR_00348	tmRNA links to Rfam database...	0.35	0.28	0.42	28	77355	55	8	30	17	71
TMR_00352	tmRNA links to Rfam database...	0.25	0.23	0.28	17	95205	77	11	33	33	58
TMR_00353	tmRNA links to Rfam database...	0.53	0.52	0.54	55	84154	56	15	31	10	50
TMR_00357	tmRNA links to Rfam database...	0.52	0.49	0.56	45	82948	53	16	19	18	47
TMR_00358	tmRNA links to Rfam database...	0.74	0.61	0.90	60	75011	22	1	6	15	39
TMR_00361	-	0.37	0.40	0.35	29	93445	72	21	33	18	43
TMR_00366	tmRNA links to Rfam database...	0.63	0.53	0.76	53	67826	28	5	12	11	47
TMR_00372	tmRNA links to Rfam database...	0.62	0.56	0.68	54	70421	38	6	19	13	42
TMR_00374	tmRNA links to Rfam database...	0.45	0.42	0.47	39	81727	48	7	37	4	53
TMR_00375	tmRNA links to Rfam database...	0.61	0.61	0.61	60	73438	38	11	27	0	38
TMR_00376	tmRNA links to Rfam database...	0.66	0.63	0.69	60	74604	41	10	17	14	35
TMR_00378	tmRNA links to Rfam database...	0.32	0.28	0.38	27	67824	56	14	31	11	70
TMR_00383	tmRNA links to Rfam database...	0.55	0.43	0.69	43	66733	27	5	14	8	57
TMR_00384	tmRNA links to Rfam database...	0.44	0.31	0.61	34	65647	26	0	22	4	74
TMR_00393	tmRNA links to Rfam database...	0.61	0.62	0.59	33	53245	48	6	17	25	20
TMR_00395	tmRNA links to Rfam database...	0.81	0.72	0.91	78	64534	13	4	4	5	31
TMR_00398	tmRNA links to Rfam database...	0.78	0.69	0.89	73	65259	15	0	9	6	33
TMR_00399	tmRNA links to Rfam database...	0.41	0.33	0.51	31	64919	37	11	19	7	63
TMR_00404	tmRNA links to Rfam database...	0.60	0.55	0.65	51	67450	38	6	21	11	41
TMR_00408	tmRNA links to Rfam database...	0.66	0.68	0.64	60	65972	43	13	21	9	28
TMR_00409	tmRNA links to Rfam database...	0.72	0.80	0.64	37	68577	53	6	15	32	9
TMR_00411	tmRNA links to Rfam database...	0.63	0.57	0.68	50	61002	31	6	17	8	37
TMR_00415	tmRNA links to Rfam database...	0.72	0.67	0.77	68	67073	21	4	16	1	33
TMR_00419	tmRNA links to Rfam database...	0.74	0.71	0.77	79	81708	41	6	17	18	32
TMR_00422	tmRNA links to Rfam database...	0.52	0.53	0.52	49	67801	56	11	35	10	43
TMR_00423	tmRNA links to Rfam database...	0.41	0.42	0.40	31	63825	54	16	31	7	42
TMR_00427	tmRNA links to Rfam database...	0.60	0.52	0.69	50	67456	27	10	12	5	47
TMR_00429	tmRNA links to Rfam database...	0.42	0.39	0.46	42	74600	58	9	40	9	67
TMR_00430	tmRNA links to Rfam database...	0.27	0.23	0.33	25	82545	51	13	38	0	84
TMR_00431	tmRNA links to Rfam database...	0.82	0.69	0.97	38	51964	34	1	0	33	17
TMR_00432	tmRNA links to Rfam database...	0.40	0.34	0.49	35	79728	44	5	32	7	69
TMR_00433	tmRNA links to Rfam database...	0.63	0.56	0.71	59	80117	29	2	22	5	47
TMR_00439	tmRNA links to Rfam database...	0.50	0.45	0.56	45	68554	46	9	27	10	56
TMR_00441	tmRNA links to Rfam database...	0.13	0.12	0.13	10	62053	73	15	50	8	73
TMR_00443	tmRNA links to Rfam database...	0.65	0.55	0.77	57	67087	24	8	9	7	47
TMR_00448	tmRNA links to Rfam database...	0.57	0.49	0.67	45	62061	28	0	22	6	47
TMR_00451	tmRNA links to Rfam database...	0.26	0.26	0.27	23	63461	66	16	46	4	66
TMR_00457	tmRNA links to Rfam database...	0.51	0.48	0.53	49	78514	48	5	38	5	53
TMR_00458	tmRNA links to Rfam database...	0.48	0.40	0.59	37	63483	33	6	20	7	56
TMR_00460	tmRNA links to Rfam database...	0.73	0.68	0.79	72	79310	25	3	16	6	34
TMR_00465	tmRNA links to Rfam database...	0.46	0.41	0.51	39	64185	41	13	24	4	55
TMR_00469	tmRNA links to Rfam database...	0.52	0.51	0.54	51	64525	48	16	28	4	49
TMR_00472	tmRNA links to Rfam database...	0.55	0.44	0.67	43	64556	26	6	15	5	54
TMR_00478	tmRNA links to Rfam database...	0.44	0.44	0.44	44	71911	60	19	36	5	55
TMR_00498	tmRNA links to Rfam database...	0.47	0.45	0.49	45	68915	54	16	30	8	54
TMR_00499	tmRNA links to Rfam database...	0.29	0.29	0.30	29	64522	74	6	63	5	70
TMR_00501	tmRNA links to Rfam database...	0.51	0.46	0.57	42	62407	33	7	25	1	50
TMR_00502	tmRNA links to Rfam database...	0.47	0.41	0.54	38	75396	39	7	25	7	55
TMR_00503	tmRNA links to Rfam database...	0.76	0.69	0.84	77	67804	23	3	12	8	34
TMR_00519	tmRNA links to Rfam database...	0.44	0.35	0.57	33	63132	35	7	18	10	62
TMR_00520	tmRNA links to Rfam database...	0.52	0.46	0.58	46	63110	43	7	27	9	53
TMR_00522	tmRNA links to Rfam database...	0.53	0.47	0.60	46	63113	39	5	26	8	51
TMR_00528	tmRNA links to Rfam database...	0.43	0.40	0.46	39	63106	55	11	34	10	58
TMR_00540	tmRNA links to Rfam database...	0.70	0.63	0.79	65	73454	27	6	11	10	39
TMR_00541	tmRNA links to Rfam database...	0.62	0.61	0.63	64	61674	44	3	35	6	41
TMR_00544	tmRNA links to Rfam database...	0.52	0.46	0.57	50	89589	44	6	31	7	58
TMR_00547	tmRNA links to Rfam database...	0.55	0.49	0.62	49	65262	32	1	29	2	51
TMR_00553	tmRNA links to Rfam database...	0.52	0.52	0.53	42	48125	44	8	30	6	39
TMR_00559	tmRNA links to Rfam database...	0.54	0.55	0.53	56	62375	56	10	40	6	45
TMR_00560	tmRNA links to Rfam database...	0.63	0.50	0.80	49	61014	17	3	9	5	49
TMR_00562	tmRNA links to Rfam database...	0.59	0.61	0.57	62	72663	53	13	33	7	40
TMR_00563	tmRNA links to Rfam database...	0.59	0.55	0.62	57	75374	43	12	23	8	46
TMR_00566	tmRNA links to Rfam database...	0.68	0.58	0.79	58	60653	22	2	13	7	42
TMR_00568	tmRNA links to Rfam database...	0.66	0.53	0.84	52	60664	16	0	10	6	47
TMR_00570	tmRNA links to Rfam database...	0.67	0.60	0.74	58	60300	27	2	18	7	39
TMR_00571	tmRNA links to Rfam database...	0.68	0.60	0.79	59	60651	24	2	14	8	40
TMR_00576	tmRNA links to Rfam database...	0.67	0.65	0.69	66	60283	36	7	22	7	36
TMR_00579	tmRNA links to Rfam database...	0.28	0.28	0.28	25	80512	76	12	52	12	65
TMR_00580	tmRNA links to Rfam database...	0.74	0.71	0.77	71	60634	29	2	19	8	29
TMR_00581	tmRNA links to Rfam database...	0.69	0.60	0.79	59	62406	23	3	13	7	39
TMR_00584	tmRNA links to Rfam database...	0.61	0.59	0.64	57	60986	36	3	29	4	40
TMR_00586	tmRNA links to Rfam database...	0.58	0.53	0.65	51	60996	34	6	22	6	46
TMR_00587	tmRNA links to Rfam database...	0.79	0.76	0.82	76	61332	22	5	12	5	24
TMR_00588	tmRNA links to Rfam database...	0.37	0.37	0.37	37	77321	64	21	42	1	64
TMR_00594	tmRNA links to Rfam database...	0.48	0.39	0.59	41	79332	31	6	22	3	63
TMR_00596	tmRNA links to Rfam database...	0.41	0.37	0.45	35	78132	53	8	35	10	60
TMR_00599	tmRNA links to Rfam database...	0.32	0.33	0.31	24	63112	55	21	33	1	48
TMR_00600	tmRNA links to Rfam database...	0.53	0.42	0.67	48	79728	28	2	22	4	67
TMR_00601	tmRNA links to Rfam database...	0.61	0.48	0.77	20	58970	37	0	6	31	22
TMR_00603	tmRNA links to Rfam database...	0.80	0.70	0.91	30	60345	32	1	2	29	13
TMR_00604	tmRNA links to Rfam database...	0.74	0.68	0.80	76	62740	20	4	15	1	36
TMR_00605	tmRNA links to Rfam database...	0.56	0.50	0.62	54	74218	37	8	25	4	54
TMR_00606	tmRNA links to Rfam database...	0.66	0.61	0.72	65	68916	30	7	18	5	42
TMR_00609	tmRNA links to Rfam database...	0.73	0.67	0.78	76	63449	21	4	17	0	37
TMR_00610	tmRNA links to Rfam database...	0.70	0.66	0.75	69	62036	34	3	20	11	35
TMR_00611	tmRNA links to Rfam database...	0.65	0.66	0.64	67	61320	43	8	30	5	35
TMR_00612	tmRNA links to Rfam database...	0.47	0.46	0.48	48	60627	55	5	46	4	56
TMR_00614	tmRNA links to Rfam database...	0.72	0.69	0.75	72	60979	33	3	21	9	32
TMR_00615	tmRNA links to Rfam database...	0.68	0.68	0.68	65	63808	31	12	18	1	31
TMR_00616	tmRNA links to Rfam database...	0.53	0.45	0.62	45	67088	33	6	22	5	54
TMR_00617	tmRNA links to Rfam database...	0.32	0.34	0.29	20	34648	53	11	37	5	38
TMR_00623	tmRNA links to Rfam database...	0.55	0.51	0.60	55	61333	46	1	36	9	53
TMR_00624	tmRNA links to Rfam database...	0.83	0.74	0.93	80	62395	14	3	3	8	28
TMR_00625	tmRNA links to Rfam database...	0.31	0.30	0.31	32	78900	72	18	53	1	74
TMR_00626	tmRNA links to Rfam database...	0.48	0.42	0.55	46	67812	43	5	33	5	63
TMR_00680	tmRNA links to Rfam database...	0.27	0.27	0.28	27	67799	76	13	57	6	72
TMR_00681	tmRNA links to Rfam database...	0.58	0.57	0.60	55	65975	46	6	30	10	42
TMR_00683	tmRNA links to Rfam database...	0.26	0.23	0.29	23	82949	65	14	42	9	77
TMR_00686	tmRNA links to Rfam database...	0.53	0.51	0.56	55	71154	55	9	35	11	53
TMR_00687	tmRNA links to Rfam database...	0.47	0.47	0.48	52	71523	61	9	47	5	59
TMR_00696	tmRNA links to Rfam database...	0.51	0.50	0.53	57	84970	62	9	42	11	57
TMR_00698	tmRNA links to Rfam database...	0.58	0.50	0.68	52	63113	28	6	19	3	52
TMR_00699	tmRNA links to Rfam database...	0.80	0.72	0.89	73	67079	13	3	6	4	29
TMR_00702	tmRNA links to Rfam database...	0.58	0.48	0.70	48	67092	26	5	16	5	52
TMR_00703	tmRNA links to Rfam database...	0.53	0.45	0.61	45	67454	34	3	26	5	54
TMR_00706	tmRNA links to Rfam database...	0.64	0.60	0.67	62	66338	33	3	27	3	41
TMR_00711	tmRNA links to Rfam database...	0.60	0.58	0.61	57	67803	39	12	24	3	41
TMR_00712	tmRNA links to Rfam database...	0.32	0.29	0.36	32	78517	65	15	42	8	77
TMR_00716	tmRNA links to Rfam database...	0.34	0.27	0.43	27	62772	40	11	25	4	73

^top

Performance of Sfold - scored lower in this pairwise comparison

1. Total counts & total scores for Sfold

Total Base Pair Counts
Total TP	29124
Total TN	43348323
Total FP	26415
Total FP CONTRA	3783
Total FP INCONS	18107
Total FP COMP	4525
Total FN	33751

Total Scores
MCC	0.514
Average MCC ± 95% Confidence Intervals	0.510 ± 0.014
Sensitivity	0.463
Positive Predictive Value	0.571
Nr of predictions	610

^top

2. Individual counts for Sfold [ download as .csv ]

RNA Chain	Rfam family	MCC	SENS	PPV	TP	TN	FP	FP CONTRA	FP INCONS	FP COMP	FN
ASE_00001	RNaseP_arch links to Rfam database...	0.64	0.61	0.67	46	34122	27	3	20	4	29
ASE_00002	RNaseP_arch links to Rfam database...	0.69	0.60	0.80	44	35456	16	2	9	5	29
ASE_00004	RNaseP_bact_a links to Rfam database...	0.74	0.66	0.83	64	47818	13	7	6	0	33
ASE_00005	RNaseP_bact_a links to Rfam database...	0.69	0.58	0.83	68	57888	18	0	14	4	49
ASE_00006	RNaseP_bact_a links to Rfam database...	0.73	0.62	0.85	58	47518	12	1	9	2	35
ASE_00007	RNaseP_bact_a links to Rfam database...	0.59	0.55	0.62	61	59587	42	1	36	5	49
ASE_00009	RNaseP_arch links to Rfam database...	0.78	0.75	0.82	50	26045	12	0	11	1	17
ASE_00012	RNaseP_bact_a links to Rfam database...	0.66	0.54	0.80	66	73838	21	2	14	5	57
ASE_00014	RNaseP_arch links to Rfam database...	0.25	0.25	0.26	26	54184	76	8	67	1	80
ASE_00017	RNaseP_nuc links to Rfam database...	0.27	0.25	0.29	16	50984	48	3	37	8	48
ASE_00018	RNaseP_bact_a links to Rfam database...	0.81	0.73	0.91	98	80493	11	0	10	1	36
ASE_00020	RNaseP_bact_a links to Rfam database...	0.58	0.52	0.66	65	73822	33	6	27	0	61
ASE_00021	RNaseP_bact_a links to Rfam database...	0.66	0.51	0.86	82	104101	18	0	13	5	78
ASE_00022	RNaseP_bact_b links to Rfam database...	0.50	0.46	0.54	57	82922	56	3	46	7	67
ASE_00023	RNaseP_bact_a links to Rfam database...	0.69	0.60	0.80	76	84160	23	4	15	4	51
ASE_00025	RNaseP_nuc links to Rfam database...	0.36	0.30	0.45	21	78559	74	3	23	48	50
ASE_00026	RNaseP_bact_a links to Rfam database...	0.63	0.53	0.74	58	59607	27	0	20	7	52
ASE_00028	RNaseP_bact_b links to Rfam database...	0.61	0.55	0.67	69	84563	43	1	33	9	57
ASE_00029	RNaseP_bact_a links to Rfam database...	0.58	0.49	0.67	60	82939	30	3	26	1	62
ASE_00030	RNaseP_bact_a links to Rfam database...	0.66	0.57	0.75	83	85381	28	3	24	1	62
ASE_00031	RNaseP_bact_a links to Rfam database...	0.71	0.61	0.84	77	86644	21	0	15	6	49
ASE_00032	RNaseP_bact_a links to Rfam database...	0.61	0.55	0.68	65	80104	34	3	28	3	53
ASE_00033	RNaseP_bact_a links to Rfam database...	0.49	0.40	0.60	48	64900	34	2	30	2	73
ASE_00035	RNaseP_bact_a links to Rfam database...	0.35	0.28	0.45	33	70426	45	8	33	4	85
ASE_00036	RNaseP_bact_a links to Rfam database...	0.55	0.46	0.66	61	75762	35	5	27	3	71
ASE_00037	RNaseP_bact_a links to Rfam database...	0.55	0.49	0.61	54	59252	34	0	34	0	56
ASE_00038	RNaseP_bact_a links to Rfam database...	0.54	0.53	0.55	54	53529	47	4	41	2	47
ASE_00040	RNaseP_bact_a links to Rfam database...	0.63	0.51	0.78	68	78916	23	1	18	4	65
ASE_00041	RNaseP_bact_a links to Rfam database...	0.56	0.52	0.62	56	57539	37	2	33	2	52
ASE_00042	RNaseP_bact_a links to Rfam database...	0.58	0.52	0.64	75	89983	43	3	39	1	70
ASE_00044	RNaseP_bact_a links to Rfam database...	0.73	0.70	0.78	73	54521	26	3	18	5	32
ASE_00046	RNaseP_bact_a links to Rfam database...	0.65	0.54	0.79	56	50332	16	1	14	1	47
ASE_00047	RNaseP_bact_a links to Rfam database...	0.40	0.38	0.43	49	74191	66	5	60	1	81
ASE_00052	RNaseP_bact_a links to Rfam database...	0.57	0.47	0.69	53	61348	28	1	23	4	59
ASE_00053	RNaseP_bact_a links to Rfam database...	0.55	0.48	0.64	64	79301	39	2	34	3	69
ASE_00056	-	0.42	0.35	0.50	25	30826	27	2	23	2	47
ASE_00057	RNaseP_bact_a links to Rfam database...	0.70	0.60	0.83	80	82119	20	4	12	4	54
ASE_00064	RNaseP_bact_a links to Rfam database...	0.52	0.44	0.61	39	45387	31	1	24	6	50
ASE_00066	RNaseP_bact_a links to Rfam database...	0.72	0.61	0.85	79	72297	14	1	13	0	51
ASE_00068	RNaseP_bact_a links to Rfam database...	0.48	0.39	0.59	33	37619	24	2	21	1	52
ASE_00069	RNaseP_bact_a links to Rfam database...	0.68	0.65	0.71	91	82900	41	5	32	4	49
ASE_00074	RNaseP_bact_a links to Rfam database...	0.60	0.57	0.64	68	67790	38	3	35	0	51
ASE_00075	RNaseP_bact_a links to Rfam database...	0.73	0.64	0.84	103	108689	23	2	17	4	59
ASE_00076	RNaseP_bact_a links to Rfam database...	0.65	0.57	0.74	67	68175	26	2	21	3	51
ASE_00077	RNaseP_bact_a links to Rfam database...	0.57	0.49	0.66	42	45086	22	6	16	0	44
ASE_00078	RNaseP_bact_a links to Rfam database...	0.65	0.59	0.71	49	43002	21	1	19	1	34
ASE_00079	RNaseP_bact_a links to Rfam database...	0.59	0.49	0.72	49	55543	19	2	17	0	51
ASE_00080	RNaseP_bact_a links to Rfam database...	0.49	0.46	0.52	57	71521	56	5	48	3	66
ASE_00081	RNaseP_bact_a links to Rfam database...	0.60	0.53	0.69	51	49696	24	0	23	1	46
ASE_00082	RNaseP_bact_a links to Rfam database...	0.73	0.61	0.87	71	70418	23	0	11	12	45
ASE_00083	RNaseP_bact_a links to Rfam database...	0.81	0.75	0.87	83	62386	17	0	12	5	27
ASE_00084	RNaseP_bact_a links to Rfam database...	0.75	0.69	0.81	68	53544	19	3	13	3	31
ASE_00087	RNaseP_bact_a links to Rfam database...	0.69	0.60	0.80	86	88303	22	3	18	1	58
ASE_00089	-	0.45	0.37	0.55	29	31322	26	0	24	2	50
ASE_00090	RNaseP_bact_a links to Rfam database...	0.66	0.58	0.74	59	55531	22	1	20	1	42
ASE_00092	RNaseP_bact_a links to Rfam database...	0.80	0.73	0.89	82	63454	12	3	7	2	31
ASE_00096	RNaseP_bact_a links to Rfam database...	0.58	0.57	0.59	65	63436	47	3	42	2	50
ASE_00099	RNaseP_bact_a links to Rfam database...	0.51	0.50	0.53	60	64506	56	6	48	2	60
ASE_00100	RNaseP_nuc links to Rfam database...	0.35	0.29	0.42	22	82162	73	3	28	42	54
ASE_00102	RNaseP_bact_a links to Rfam database...	0.44	0.41	0.48	68	117714	76	7	66	3	98
ASE_00104	RNaseP_bact_a links to Rfam database...	0.65	0.56	0.75	67	64172	24	2	20	2	52
ASE_00105	RNaseP_bact_a links to Rfam database...	0.45	0.40	0.52	44	64176	44	5	36	3	67
ASE_00107	RNaseP_bact_a links to Rfam database...	0.67	0.55	0.81	70	73067	17	0	16	1	57
ASE_00108	RNaseP_nuc links to Rfam database...	0.54	0.51	0.57	32	46915	55	6	18	31	31
ASE_00111	RNaseP_nuc links to Rfam database...	0.31	0.32	0.31	18	50028	45	15	25	5	39
ASE_00112	RNaseP_bact_a links to Rfam database...	0.79	0.73	0.85	85	75366	22	5	10	7	31
ASE_00115	RNaseP_bact_a links to Rfam database...	0.65	0.52	0.80	53	54549	19	0	13	6	48
ASE_00116	RNaseP_arch links to Rfam database...	0.22	0.17	0.31	11	31590	28	0	25	3	55
ASE_00118	RNaseP_bact_a links to Rfam database...	0.52	0.46	0.59	47	60647	34	3	29	2	55
ASE_00119	RNaseP_bact_a links to Rfam database...	0.87	0.82	0.92	89	62738	9	1	7	1	19
ASE_00120	RNaseP_arch links to Rfam database...	0.61	0.53	0.69	50	46899	22	4	18	0	44
ASE_00121	RNaseP_arch links to Rfam database...	0.37	0.25	0.55	23	45108	19	2	17	0	69
ASE_00122	RNaseP_bact_a links to Rfam database...	0.35	0.28	0.42	25	43306	34	0	34	0	63
ASE_00123	RNaseP_bact_a links to Rfam database...	0.34	0.28	0.41	24	38444	39	3	32	4	61
ASE_00125	RNaseP_bact_a links to Rfam database...	0.71	0.58	0.88	51	39282	7	0	7	0	37
ASE_00126	RNaseP_bact_a links to Rfam database...	0.83	0.79	0.88	65	40396	13	1	8	4	17
ASE_00128	RNaseP_bact_a links to Rfam database...	0.73	0.65	0.81	65	53221	21	1	14	6	35
ASE_00129	RNaseP_bact_a links to Rfam database...	0.51	0.47	0.56	52	62742	44	2	39	3	59
ASE_00131	RNaseP_bact_a links to Rfam database...	0.66	0.51	0.86	43	39290	16	0	7	9	42
ASE_00132	RNaseP_bact_a links to Rfam database...	0.66	0.63	0.70	60	50317	28	4	22	2	35
ASE_00134	RNaseP_bact_a links to Rfam database...	0.36	0.33	0.40	31	50326	46	5	41	0	64
ASE_00135	RNaseP_bact_a links to Rfam database...	0.50	0.45	0.56	49	63103	42	0	38	4	60
ASE_00136	RNaseP_bact_a links to Rfam database...	0.70	0.61	0.81	56	48136	18	0	13	5	36
ASE_00137	RNaseP_bact_a links to Rfam database...	0.55	0.44	0.69	43	48454	22	1	18	3	55
ASE_00138	RNaseP_bact_a links to Rfam database...	0.53	0.52	0.54	42	40392	38	4	32	2	39
ASE_00139	RNaseP_bact_a links to Rfam database...	0.83	0.71	0.96	74	54208	6	0	3	3	30
ASE_00140	RNaseP_bact_a links to Rfam database...	0.71	0.57	0.90	71	70797	8	2	6	0	54
ASE_00142	RNaseP_bact_a links to Rfam database...	0.64	0.54	0.76	66	67074	23	3	18	2	56
ASE_00145	RNaseP_arch links to Rfam database...	0.47	0.42	0.53	47	70036	48	4	38	6	64
ASE_00146	RNaseP_bact_a links to Rfam database...	0.47	0.36	0.62	45	70803	29	1	27	1	79
ASE_00148	RNaseP_arch links to Rfam database...	0.72	0.66	0.78	102	112445	30	1	27	2	52
ASE_00151	RNaseP_bact_a links to Rfam database...	0.33	0.28	0.40	27	51935	41	5	36	0	71
ASE_00153	RNaseP_nuc links to Rfam database...	0.69	0.67	0.70	49	57560	61	2	19	40	24
ASE_00154	RNaseP_arch links to Rfam database...	0.67	0.63	0.72	67	65248	29	2	24	3	40
ASE_00155	RNaseP_arch links to Rfam database...	0.64	0.51	0.80	73	93437	21	3	15	3	69
ASE_00163	RNaseP_bact_a links to Rfam database...	0.49	0.44	0.55	41	53226	43	5	29	9	52
ASE_00165	RNaseP_bact_a links to Rfam database...	0.60	0.56	0.63	57	52885	34	9	24	1	44
ASE_00168	RNaseP_nuc links to Rfam database...	0.27	0.30	0.24	19	60648	76	18	41	17	45
ASE_00169	RNaseP_bact_a links to Rfam database...	0.65	0.53	0.80	57	57220	15	0	14	1	50
ASE_00170	RNaseP_bact_a links to Rfam database...	0.64	0.54	0.76	50	48762	19	2	14	3	43
ASE_00171	RNaseP_bact_a links to Rfam database...	0.61	0.60	0.62	56	48426	36	7	27	2	38
ASE_00172	RNaseP_bact_a links to Rfam database...	0.74	0.61	0.90	65	58924	7	2	5	0	41
ASE_00174	RNaseP_bact_a links to Rfam database...	0.47	0.44	0.49	48	60978	51	3	46	2	61
ASE_00175	RNaseP_bact_a links to Rfam database...	0.70	0.63	0.79	67	59946	22	3	15	4	40
ASE_00176	RNaseP_bact_a links to Rfam database...	0.62	0.55	0.70	61	59944	29	4	22	3	49
ASE_00179	RNaseP_bact_a links to Rfam database...	0.64	0.65	0.63	55	44166	33	7	25	1	29
ASE_00180	RNaseP_bact_a links to Rfam database...	0.71	0.68	0.75	68	51269	29	2	21	6	32
ASE_00181	RNaseP_bact_a links to Rfam database...	0.55	0.54	0.56	57	57528	51	3	42	6	49
ASE_00182	RNaseP_bact_a links to Rfam database...	0.53	0.49	0.57	67	84137	51	3	48	0	69
ASE_00183	RNaseP_bact_a links to Rfam database...	0.73	0.71	0.75	80	61319	30	0	26	4	33
ASE_00184	RNaseP_bact_a links to Rfam database...	0.69	0.63	0.76	64	54531	21	3	17	1	38
ASE_00185	RNaseP_bact_a links to Rfam database...	0.77	0.70	0.86	89	73432	21	3	12	6	39
ASE_00186	RNaseP_bact_a links to Rfam database...	0.73	0.70	0.77	92	78884	33	3	24	6	40
ASE_00187	RNaseP_arch links to Rfam database...	0.47	0.43	0.53	49	68542	48	5	39	4	66
ASE_00189	RNaseP_bact_b links to Rfam database...	0.55	0.44	0.69	45	63125	24	2	18	4	57
ASE_00190	RNaseP_bact_b links to Rfam database...	0.65	0.46	0.93	41	45407	5	0	3	2	49
ASE_00192	RNaseP_bact_b links to Rfam database...	0.33	0.27	0.40	36	84575	61	6	49	6	97
ASE_00194	RNaseP_bact_b links to Rfam database...	0.49	0.45	0.52	54	73433	53	7	42	4	65
ASE_00195	-	0.64	0.58	0.72	77	86213	35	1	29	5	56
ASE_00196	RNaseP_arch links to Rfam database...	0.79	0.77	0.81	58	31554	17	2	12	3	17
ASE_00197	RNaseP_bact_a links to Rfam database...	0.58	0.51	0.66	74	89141	44	1	37	6	71
ASE_00198	RNaseP_bact_a links to Rfam database...	0.63	0.62	0.64	63	52552	35	6	29	0	39
ASE_00203	RNaseP_bact_a links to Rfam database...	0.72	0.61	0.84	59	46595	11	4	7	0	37
ASE_00204	RNaseP_bact_b links to Rfam database...	0.58	0.41	0.81	46	67839	17	0	11	6	66
ASE_00205	RNaseP_arch links to Rfam database...	0.51	0.43	0.59	39	45990	30	2	25	3	51
ASE_00209	RNaseP_arch links to Rfam database...	0.41	0.38	0.46	33	42999	39	5	34	0	55
ASE_00210	RNaseP_arch links to Rfam database...	0.59	0.60	0.59	39	27195	27	6	21	0	26
ASE_00212	RNaseP_bact_a links to Rfam database...	0.73	0.68	0.79	100	93835	30	2	24	4	48
ASE_00213	RNaseP_arch links to Rfam database...	0.69	0.62	0.76	41	27207	13	1	12	0	25
ASE_00214	RNaseP_bact_a links to Rfam database...	0.79	0.77	0.82	79	56184	22	3	14	5	24
ASE_00215	RNaseP_bact_a links to Rfam database...	0.55	0.51	0.60	50	48432	37	4	30	3	49
ASE_00216	RNaseP_bact_a links to Rfam database...	0.70	0.65	0.76	53	39270	17	5	12	0	29
ASE_00217	RNaseP_bact_a links to Rfam database...	0.44	0.34	0.57	31	40416	26	1	22	3	59
ASE_00221	RNaseP_bact_a links to Rfam database...	0.57	0.44	0.73	52	64549	22	1	18	3	65
ASE_00222	RNaseP_arch links to Rfam database...	0.69	0.59	0.79	93	111984	24	3	21	0	64
ASE_00227	RNaseP_bact_a links to Rfam database...	0.33	0.30	0.35	40	78890	73	6	67	0	93
ASE_00228	RNaseP_bact_a links to Rfam database...	0.69	0.62	0.78	53	46903	15	11	4	0	33
ASE_00229	RNaseP_bact_a links to Rfam database...	0.63	0.60	0.66	52	42407	28	8	19	1	35
ASE_00231	RNaseP_bact_a links to Rfam database...	0.64	0.64	0.66	61	47802	33	5	27	1	35
ASE_00232	RNaseP_bact_a links to Rfam database...	0.65	0.61	0.69	51	38429	25	3	20	2	33
ASE_00234	RNaseP_bact_a links to Rfam database...	0.56	0.45	0.69	58	75382	30	1	25	4	71
ASE_00237	RNaseP_nuc links to Rfam database...	0.00	0.00	0.00	0	45703	67	18	32	17	56
ASE_00238	RNaseP_bact_a links to Rfam database...	0.49	0.47	0.51	54	64155	56	1	51	4	60
ASE_00240	RNaseP_bact_a links to Rfam database...	0.67	0.60	0.76	56	46591	23	0	18	5	37
ASE_00241	RNaseP_bact_a links to Rfam database...	0.66	0.49	0.88	43	43907	7	0	6	1	44
ASE_00242	RNaseP_bact_a links to Rfam database...	0.69	0.60	0.81	67	60992	18	0	16	2	45
ASE_00246	RNaseP_nuc links to Rfam database...	0.20	0.12	0.33	8	48181	20	5	11	4	59
ASE_00247	RNaseP_nuc links to Rfam database...	0.32	0.28	0.36	18	54235	68	4	28	36	46
ASE_00248	RNaseP_bact_a links to Rfam database...	0.62	0.54	0.70	62	62393	30	1	25	4	52
ASE_00250	RNaseP_bact_a links to Rfam database...	0.63	0.55	0.73	72	78905	31	7	19	5	59
ASE_00252	RNaseP_bact_a links to Rfam database...	0.59	0.55	0.64	92	115296	57	4	48	5	76
ASE_00254	RNaseP_bact_a links to Rfam database...	0.80	0.66	0.98	54	36801	1	0	1	0	28
ASE_00255	RNaseP_bact_a links to Rfam database...	0.72	0.66	0.78	86	74581	25	3	21	1	44
ASE_00257	RNaseP_bact_a links to Rfam database...	0.71	0.56	0.90	54	50980	6	0	6	0	43
ASE_00259	RNaseP_bact_a links to Rfam database...	0.53	0.42	0.66	51	73076	28	4	22	2	70
ASE_00263	RNaseP_bact_a links to Rfam database...	0.69	0.63	0.77	75	70403	23	5	17	1	45
ASE_00264	RNaseP_nuc links to Rfam database...	0.55	0.51	0.59	51	49054	41	1	35	5	49
ASE_00267	RNaseP_bact_a links to Rfam database...	0.54	0.35	0.84	31	45113	10	0	6	4	57
ASE_00270	RNaseP_bact_a links to Rfam database...	0.68	0.66	0.69	85	72267	40	6	32	2	43
ASE_00274	RNaseP_bact_a links to Rfam database...	0.51	0.48	0.54	49	55521	41	8	33	0	54
ASE_00277	RNaseP_bact_a links to Rfam database...	0.46	0.44	0.48	40	48121	44	8	36	0	51
ASE_00279	RNaseP_bact_a links to Rfam database...	0.71	0.53	0.95	54	53244	4	0	3	1	47
ASE_00280	RNaseP_bact_a links to Rfam database...	0.65	0.57	0.75	56	51928	20	2	17	1	42
ASE_00281	RNaseP_bact_a links to Rfam database...	0.72	0.56	0.94	49	44499	9	0	3	6	39
ASE_00282	RNaseP_bact_a links to Rfam database...	0.55	0.47	0.64	60	77721	35	1	33	1	67
ASE_00283	RNaseP_bact_a links to Rfam database...	0.51	0.42	0.63	45	61704	30	3	24	3	62
ASE_00284	RNaseP_bact_a links to Rfam database...	0.64	0.61	0.67	66	58213	39	2	30	7	42
ASE_00285	RNaseP_bact_a links to Rfam database...	0.72	0.67	0.77	82	68900	32	0	24	8	40
ASE_00286	RNaseP_bact_a links to Rfam database...	0.44	0.42	0.46	39	46580	52	3	43	6	53
ASE_00287	RNaseP_bact_a links to Rfam database...	0.73	0.68	0.78	70	54856	26	2	18	6	33
ASE_00288	RNaseP_bact_a links to Rfam database...	0.33	0.29	0.38	27	45984	46	3	42	1	66
ASE_00289	RNaseP_bact_a links to Rfam database...	0.77	0.65	0.91	102	100913	14	2	8	4	55
ASE_00291	-	0.46	0.33	0.65	31	48468	19	1	16	2	63
ASE_00292	RNaseP_bact_a links to Rfam database...	0.68	0.61	0.76	84	81699	30	2	25	3	54
ASE_00294	RNaseP_bact_a links to Rfam database...	0.80	0.72	0.89	123	114343	17	2	13	2	48
ASE_00295	RNaseP_bact_a links to Rfam database...	0.56	0.50	0.63	65	73817	40	4	34	2	66
ASE_00296	RNaseP_bact_a links to Rfam database...	0.24	0.22	0.27	32	91686	89	8	80	1	113
ASE_00297	RNaseP_bact_a links to Rfam database...	0.61	0.50	0.75	49	52910	16	1	15	0	49
ASE_00298	RNaseP_bact_a links to Rfam database...	0.61	0.52	0.70	59	67444	27	4	21	2	54
ASE_00299	RNaseP_bact_a links to Rfam database...	0.55	0.50	0.61	50	49373	37	5	27	5	50
ASE_00313	RNaseP_nuc links to Rfam database...	0.71	0.66	0.76	59	62403	36	4	15	17	30
ASE_00316	RNaseP_nuc links to Rfam database...	0.61	0.54	0.70	53	107804	52	4	19	29	45
ASE_00318	RNaseP_bact_b links to Rfam database...	0.64	0.56	0.74	66	80111	27	7	16	4	52
ASE_00327	RNaseP_nuc links to Rfam database...	0.82	0.79	0.85	70	57209	27	3	9	15	19
ASE_00328	RNaseP_bact_b links to Rfam database...	0.45	0.41	0.48	46	72676	54	3	46	5	66
ASE_00330	RNaseP_nuc links to Rfam database...	0.77	0.73	0.80	66	56198	33	0	16	17	24
ASE_00332	RNaseP_bact_a links to Rfam database...	0.53	0.51	0.55	70	81683	58	2	55	1	68
ASE_00335	RNaseP_bact_b links to Rfam database...	0.55	0.45	0.68	52	75390	30	3	21	6	64
ASE_00337	RNaseP_nuc links to Rfam database...	0.61	0.54	0.69	38	39285	29	0	17	12	33
ASE_00338	RNaseP_nuc links to Rfam database...	0.64	0.59	0.69	58	66346	42	5	21	16	40
ASE_00339	RNaseP_bact_a links to Rfam database...	0.50	0.47	0.52	56	80093	63	3	48	12	63
ASE_00340	RNaseP_bact_a links to Rfam database...	0.75	0.73	0.77	62	45975	25	6	13	6	23
ASE_00342	RNaseP_bact_a links to Rfam database...	0.66	0.57	0.78	65	62398	19	0	18	1	50
ASE_00343	RNaseP_bact_a links to Rfam database...	0.49	0.44	0.55	50	83345	56	5	36	15	63
ASE_00346	RNaseP_arch links to Rfam database...	0.36	0.33	0.40	32	48125	51	4	44	3	65
ASE_00353	RNaseP_bact_a links to Rfam database...	0.59	0.48	0.74	51	57901	20	2	16	2	56
ASE_00359	RNaseP_arch links to Rfam database...	0.50	0.49	0.52	39	42703	43	3	33	7	41
ASE_00360	RNaseP_arch links to Rfam database...	0.35	0.29	0.41	19	29357	30	3	24	3	46
ASE_00361	RNaseP_bact_a links to Rfam database...	0.50	0.47	0.53	60	75353	57	6	47	4	67
ASE_00362	RNaseP_bact_a links to Rfam database...	0.66	0.60	0.71	55	48128	25	3	19	3	36
ASE_00363	RNaseP_bact_a links to Rfam database...	0.57	0.54	0.60	51	51275	35	1	33	1	43
ASE_00364	RNaseP_bact_a links to Rfam database...	0.38	0.33	0.43	35	54204	47	4	42	1	70
ASE_00366	RNaseP_bact_a links to Rfam database...	0.58	0.59	0.57	58	58552	45	9	34	2	40
ASE_00367	RNaseP_bact_a links to Rfam database...	0.43	0.38	0.49	33	43004	34	4	30	0	53
ASE_00369	RNaseP_bact_a links to Rfam database...	0.75	0.68	0.82	73	55856	17	1	15	1	34
ASE_00370	RNaseP_bact_a links to Rfam database...	0.68	0.63	0.74	53	41833	20	1	18	1	31
ASE_00372	RNaseP_bact_a links to Rfam database...	0.73	0.69	0.77	69	51913	26	4	17	5	31
ASE_00374	RNaseP_bact_a links to Rfam database...	0.39	0.38	0.42	33	44771	46	10	36	0	55
ASE_00375	RNaseP_bact_a links to Rfam database...	0.71	0.54	0.95	59	60316	5	0	3	2	51
ASE_00376	RNaseP_bact_a links to Rfam database...	0.57	0.54	0.60	57	56858	43	3	35	5	48
ASE_00377	RNaseP_bact_a links to Rfam database...	0.70	0.67	0.73	72	57531	33	4	23	6	35
ASE_00379	RNaseP_bact_a links to Rfam database...	0.67	0.55	0.82	49	45996	20	2	9	9	40
ASE_00380	RNaseP_bact_a links to Rfam database...	0.53	0.40	0.69	40	54888	23	0	18	5	59
ASE_00382	RNaseP_bact_a links to Rfam database...	0.58	0.54	0.63	45	41833	30	6	21	3	39
ASE_00383	RNaseP_bact_a links to Rfam database...	0.58	0.53	0.63	56	54526	35	5	28	2	49
ASE_00384	RNaseP_bact_a links to Rfam database...	0.64	0.43	0.93	40	48473	7	0	3	4	52
ASE_00385	RNaseP_bact_a links to Rfam database...	0.53	0.43	0.65	35	41851	21	0	19	2	46
ASE_00386	RNaseP_bact_a links to Rfam database...	0.57	0.53	0.61	51	50319	38	3	30	5	45
ASE_00387	RNaseP_bact_a links to Rfam database...	0.60	0.46	0.79	48	55884	17	1	12	4	56
ASE_00388	RNaseP_bact_a links to Rfam database...	0.72	0.67	0.78	60	45676	20	0	17	3	29
ASE_00390	RNaseP_bact_a links to Rfam database...	0.71	0.58	0.88	49	42139	15	2	5	8	36
ASE_00393	RNaseP_bact_a links to Rfam database...	0.50	0.41	0.60	38	47832	32	1	24	7	55
ASE_00394	RNaseP_bact_a links to Rfam database...	0.80	0.77	0.84	72	46885	17	2	12	3	21
ASE_00395	RNaseP_bact_a links to Rfam database...	0.81	0.70	0.94	59	41553	8	0	4	4	25
ASE_00396	RNaseP_bact_a links to Rfam database...	0.47	0.37	0.60	31	41564	25	1	20	4	52
ASE_00397	RNaseP_bact_a links to Rfam database...	0.46	0.41	0.52	43	54533	39	5	34	0	62
ASE_00398	RNaseP_bact_a links to Rfam database...	0.69	0.64	0.74	67	55855	25	1	22	2	37
ASE_00400	RNaseP_bact_a links to Rfam database...	0.74	0.67	0.82	71	57883	17	1	15	1	35
ASE_00401	RNaseP_bact_a links to Rfam database...	0.54	0.56	0.53	70	76897	61	10	51	0	56
ASE_00402	RNaseP_bact_a links to Rfam database...	0.64	0.45	0.90	38	42444	7	0	4	3	47
ASE_00403	RNaseP_bact_a links to Rfam database...	0.57	0.45	0.73	48	55879	18	1	17	0	59
ASE_00404	RNaseP_bact_a links to Rfam database...	0.62	0.54	0.71	46	43006	25	0	19	6	39
ASE_00406	RNaseP_bact_a links to Rfam database...	0.73	0.67	0.79	63	48748	21	6	11	4	31
ASE_00408	-	0.65	0.56	0.75	40	32332	18	1	12	5	31
ASE_00409	-	0.51	0.48	0.55	40	40968	33	5	28	0	43
ASE_00411	RNaseP_bact_a links to Rfam database...	0.29	0.27	0.32	24	49379	53	6	46	1	65
ASE_00412	RNaseP_bact_a links to Rfam database...	0.56	0.50	0.62	53	58225	33	8	25	0	52
ASE_00413	RNaseP_bact_a links to Rfam database...	0.43	0.42	0.44	34	44474	43	13	30	0	47
ASE_00414	RNaseP_bact_a links to Rfam database...	0.31	0.26	0.37	25	46292	48	1	42	5	70
ASE_00415	RNaseP_bact_a links to Rfam database...	0.60	0.53	0.68	55	54865	28	4	22	2	48
ASE_00416	RNaseP_bact_a links to Rfam database...	0.70	0.67	0.73	85	77305	35	3	28	4	42
ASE_00417	RNaseP_arch links to Rfam database...	0.41	0.41	0.41	41	54516	61	7	51	3	59
ASE_00418	RNaseP_arch links to Rfam database...	0.34	0.27	0.44	20	38736	27	2	23	2	55
ASE_00419	RNaseP_bact_a links to Rfam database...	0.75	0.73	0.77	75	54849	26	4	18	4	28
ASE_00422	RNaseP_bact_a links to Rfam database...	0.69	0.63	0.77	59	46894	25	0	18	7	35
ASE_00423	RNaseP_bact_a links to Rfam database...	0.60	0.54	0.66	59	56864	32	4	26	2	50
ASE_00426	RNaseP_bact_a links to Rfam database...	0.46	0.40	0.53	43	60994	38	2	36	0	65
ASE_00428	RNaseP_bact_a links to Rfam database...	0.61	0.40	0.94	50	76583	4	0	3	1	75
ASE_00429	-	0.66	0.56	0.79	37	28156	10	3	7	0	29
ASE_00430	RNaseP_bact_a links to Rfam database...	0.65	0.62	0.67	60	46882	35	5	24	6	37
ASE_00431	RNaseP_bact_a links to Rfam database...	0.55	0.49	0.60	47	46282	36	6	25	5	48
ASE_00434	RNaseP_bact_b links to Rfam database...	0.60	0.55	0.64	61	68170	42	5	29	8	49
ASE_00437	RNaseP_bact_a links to Rfam database...	0.40	0.39	0.42	52	79277	73	5	67	1	83
ASE_00438	RNaseP_bact_a links to Rfam database...	0.48	0.44	0.53	51	65970	45	0	45	0	65
ASE_00441	RNaseP_bact_a links to Rfam database...	0.78	0.74	0.81	83	64159	25	3	16	6	29
ASE_00447	RNaseP_bact_a links to Rfam database...	0.65	0.59	0.72	68	60283	32	1	26	5	48
ASE_00448	RNaseP_bact_a links to Rfam database...	0.23	0.22	0.24	25	64155	87	6	75	6	87
ASE_00451	RNaseP_bact_a links to Rfam database...	0.62	0.52	0.73	65	70787	24	2	22	0	60
CRW_00004	-	0.54	0.54	0.53	71	154157	95	11	51	33	60
CRW_00005	-	0.57	0.56	0.58	74	137948	76	9	44	23	58
CRW_00007	-	0.31	0.30	0.32	40	144867	89	23	61	5	93
CRW_00009	-	0.59	0.59	0.60	81	137939	77	9	46	22	57
CRW_00010	-	0.80	0.72	0.89	91	102729	24	3	8	13	35
CRW_00011	-	0.66	0.67	0.66	92	118201	60	7	41	12	46
CRW_00012	-	0.50	0.40	0.63	57	147062	39	13	21	5	84
CRW_00013	Intron_gpI links to Rfam database...	0.36	0.27	0.48	31	103675	57	8	26	23	84
CRW_00014	-	0.46	0.38	0.57	47	103657	46	6	30	10	76
CRW_00016	Intron_gpI links to Rfam database...	0.80	0.65	0.98	78	77341	14	0	2	12	42
CRW_00017	-	0.41	0.44	0.38	40	92131	75	14	50	11	51
CRW_00018	-	0.48	0.47	0.50	57	182595	96	21	37	38	64
CRW_00019	-	0.75	0.66	0.84	91	127657	40	0	17	23	46
CRW_00423	-	0.18	0.17	0.18	33	242376	157	20	127	10	156
CRW_00429	-	0.20	0.16	0.25	37	306790	112	18	91	3	196
CRW_00605	-	0.75	0.56	1.00	39	183882	91	0	0	91	31
CRW_00608	-	0.73	0.68	0.77	54	35708	23	1	15	7	25
CRW_00610	Intron_gpI links to Rfam database...	0.51	0.49	0.52	40	36238	37	9	28	0	41
CRW_00611	-	0.77	0.68	0.88	51	31317	14	0	7	7	24
CRW_00612	-	0.64	0.59	0.70	55	270401	157	0	24	133	38
CRW_00613	Intron_gpI links to Rfam database...	0.74	0.67	0.83	52	34917	19	0	11	8	26
CRW_00614	Intron_gpI links to Rfam database...	0.19	0.19	0.19	11	121713	102	12	35	55	46
CRW_00618	Intron_gpI links to Rfam database...	0.13	0.13	0.14	8	56223	68	13	36	19	53
CRW_00619	Intron_gpI links to Rfam database...	0.41	0.30	0.56	22	164986	76	2	15	59	51
CRW_00620	Intron_gpI links to Rfam database...	0.18	0.22	0.14	14	150874	138	30	57	51	49
CRW_00621	Intron_gpI links to Rfam database...	0.31	0.30	0.33	21	153118	131	6	36	89	50
CRW_00623	Intron_gpI links to Rfam database...	0.41	0.30	0.57	25	129751	78	2	17	59	58
CRW_00626	-	0.62	0.63	0.62	65	100920	54	16	24	14	39
CRW_00629	-	0.51	0.45	0.58	55	91283	43	10	30	3	67
CRW_00632	-	0.58	0.55	0.61	71	82912	51	2	43	6	57
CRW_00633	Intron_gpI links to Rfam database...	0.65	0.49	0.85	52	63485	11	2	7	2	54
CRW_00634	Intron_gpI links to Rfam database...	0.54	0.51	0.58	48	64537	40	6	29	5	46
CRW_00635	-	0.50	0.45	0.56	62	109168	58	6	42	10	75
CRW_00636	-	0.54	0.53	0.54	76	114820	69	9	55	5	67
CRW_00637	-	0.31	0.30	0.31	48	133750	110	18	87	5	110
CRW_00639	-	0.76	0.76	0.77	105	126619	48	12	20	16	33
CRW_00641	-	0.67	0.66	0.68	50	39829	32	5	19	8	26
CRW_00642	-	0.45	0.46	0.43	30	47209	47	9	30	8	35
CRW_00643	-	0.44	0.40	0.48	49	123153	58	18	36	4	73
CRW_00645	-	0.72	0.63	0.82	42	35460	17	3	6	8	25
CRW_00646	-	0.66	0.56	0.78	36	34934	13	3	7	3	28
CRW_00648	-	0.61	0.56	0.67	83	137952	40	10	30	0	65
CRW_00649	-	0.72	0.63	0.83	78	204386	85	1	15	69	46
CRW_00650	-	0.54	0.49	0.59	69	112934	51	3	44	4	73
CRW_00651	-	0.70	0.70	0.70	85	100006	43	9	28	6	36
CRW_00652	-	0.63	0.63	0.63	82	132224	67	8	41	18	48
CRW_00653	-	0.69	0.66	0.73	88	94710	35	4	28	3	46
CRW_00654	-	0.86	0.81	0.92	101	78100	12	1	8	3	23
CRW_00655	-	0.76	0.73	0.80	90	89141	27	4	18	5	34
CRW_00656	-	0.46	0.43	0.49	56	90410	64	9	50	5	73
CRW_00657	-	0.78	0.76	0.81	104	105901	29	2	23	4	32
CRW_00658	-	0.49	0.48	0.50	49	74593	49	20	29	0	53
CRW_00659	-	0.37	0.38	0.37	23	32322	44	15	25	4	38
CRW_00660	-	0.56	0.55	0.58	33	22098	24	5	19	0	27
CRW_00661	-	0.12	0.10	0.15	5	24277	30	11	17	2	46
CRW_00662	-	0.39	0.40	0.38	26	28612	49	7	35	7	39
CRW_00663	-	0.00	0.00	0.00	0	26078	28	3	25	0	61
CRW_00664	-	0.16	0.10	0.25	8	53596	24	5	19	0	70
CRW_00665	-	0.06	0.06	0.06	3	23606	45	14	30	1	45
CRW_00666	-	0.54	0.50	0.59	63	96034	56	7	37	12	63
CRW_00668	-	0.36	0.34	0.39	51	163747	89	13	67	9	99
CRW_00669	-	0.56	0.46	0.67	55	97379	38	4	23	11	64
CRW_00670	Intron_gpI links to Rfam database...	0.80	0.74	0.87	89	70023	15	6	7	2	31
CRW_00671	Intron_gpI links to Rfam database...	0.75	0.70	0.81	82	62734	23	5	14	4	35
CRW_00672	Intron_gpI links to Rfam database...	0.78	0.71	0.85	79	72297	20	6	8	6	32
CRW_00673	-	0.85	0.84	0.86	88	100026	32	12	2	18	17
CRW_00674	Intron_gpI links to Rfam database...	0.60	0.54	0.66	67	83335	36	6	28	2	57
CRW_00676	Intron_gpI links to Rfam database...	0.61	0.57	0.66	65	93430	48	9	24	15	50
CRW_00677	-	0.59	0.57	0.62	60	71913	42	8	29	5	45
CRW_00679	-	0.24	0.23	0.25	25	76537	78	13	61	4	82
CRW_00681	-	0.50	0.48	0.52	54	112946	59	13	37	9	58
CRW_00685	-	0.58	0.54	0.63	57	156989	62	9	25	28	49
CRW_00686	-	0.62	0.55	0.70	69	95167	38	6	24	8	56
CRW_00687	-	0.69	0.68	0.69	45	28615	24	7	13	4	21
CRW_00688	-	0.85	0.75	0.96	43	21900	3	1	1	1	14
CRW_00689	-	0.69	0.71	0.66	55	33587	30	11	17	2	22
CRW_00690	-	0.78	0.72	0.83	50	33351	15	2	8	5	19
CRW_00691	-	0.56	0.57	0.56	38	27193	31	4	26	1	29
CRW_00692	Intron_gpI links to Rfam database...	0.54	0.42	0.69	38	68580	27	6	11	10	52
CRW_00693	-	0.84	0.78	0.90	95	89148	25	1	9	15	27
CRW_00694	-	0.66	0.64	0.68	78	85790	41	5	32	4	44
CRW_00699	-	0.67	0.61	0.73	77	91701	30	1	27	2	49
CRW_00700	-	0.70	0.61	0.80	90	180788	44	0	23	21	57
CRW_00703	-	0.37	0.27	0.51	18	40435	23	3	14	6	48
CRW_00714	-	0.60	0.42	0.85	45	186302	41	0	8	33	62
CRW_00715	-	0.76	0.70	0.83	73	69290	18	3	12	3	31
CRW_00716	-	0.34	0.34	0.35	30	193667	127	10	46	71	59
CRW_00717	-	0.64	0.50	0.83	74	153646	17	3	12	2	74
CRW_00718	-	0.79	0.74	0.84	142	189867	45	2	25	18	49
CRW_00719	-	0.63	0.53	0.75	48	230117	115	5	11	99	43
CRW_00720	-	0.17	0.18	0.17	16	208240	132	24	55	53	75
CRW_00721	-	0.57	0.60	0.54	41	58577	45	14	21	10	27
CRW_00764	-	0.05	0.05	0.06	9	252970	140	26	111	3	187
CRW_00775	-	0.15	0.09	0.23	20	314733	69	30	38	1	192
CRW_00815	-	0.69	0.57	0.84	90	159788	22	2	15	5	68
CRW_00816	-	0.37	0.34	0.39	44	143804	87	9	59	19	85
CRW_00820	-	0.59	0.56	0.62	81	136373	54	14	35	5	64
PDB_00072	-	0.46	0.46	0.46	96	148033	111	6	105	0	114
PDB_00078	-	0.72	0.65	0.79	75	49675	20	6	14	0	40
PDB_00079	-	0.70	0.64	0.76	91	121652	57	8	20	29	51
PDB_00278	-	0.07	0.07	0.08	5	24910	61	4	57	0	67
PDB_00403	-	0.52	0.50	0.54	76	124609	73	14	51	8	77
PDB_00423	-	0.21	0.20	0.23	15	26731	50	6	44	0	59
PDB_00701	-	0.45	0.42	0.48	46	45356	50	5	44	1	63
PDB_00747	-	0.72	0.60	0.87	48	24476	7	0	7	0	32
PDB_00827	Intron_gpI links to Rfam database...	0.64	0.47	0.86	38	26984	8	0	6	2	43
PDB_00917	-	0.52	0.48	0.55	46	35162	43	3	34	6	49
PDB_00919	RNaseP_bact_a links to Rfam database...	0.55	0.48	0.64	49	44176	30	3	25	2	54
PDB_01129	-	0.27	0.28	0.26	20	35435	61	15	41	5	51
PDB_01157	-	0.19	0.09	0.39	9	50063	14	3	11	0	89
PDB_01166	-	0.41	0.36	0.46	77	181939	94	17	73	4	135
RFA_00597	Telomerase-vert links to Rfam database...	0.57	0.49	0.67	53	97824	46	4	22	20	56
RFA_00598	Telomerase-vert links to Rfam database...	0.62	0.54	0.71	55	84589	43	2	20	21	46
RFA_00599	Telomerase-vert links to Rfam database...	0.69	0.68	0.70	75	101368	52	8	24	20	36
RFA_00600	Telomerase-vert links to Rfam database...	0.55	0.57	0.52	57	120186	79	15	37	27	43
RFA_00601	Telomerase-vert links to Rfam database...	0.27	0.21	0.35	24	99167	52	9	35	8	90
RFA_00602	Telomerase-vert links to Rfam database...	0.54	0.53	0.55	62	101363	68	16	34	18	54
TMR_00007	tmRNA links to Rfam database...	0.31	0.28	0.35	30	61690	61	9	47	5	78
TMR_00008	tmRNA links to Rfam database...	0.55	0.44	0.67	47	65996	30	4	19	7	59
TMR_00010	tmRNA links to Rfam database...	0.29	0.29	0.29	28	57874	68	12	56	0	68
TMR_00012	tmRNA links to Rfam database...	0.22	0.22	0.22	18	64537	80	20	45	15	63
TMR_00014	tmRNA links to Rfam database...	0.46	0.43	0.51	47	68542	53	12	34	7	63
TMR_00017	tmRNA links to Rfam database...	0.30	0.24	0.39	24	67100	43	5	32	6	78
TMR_00018	tmRNA links to Rfam database...	0.22	0.21	0.24	19	64542	63	15	44	4	73
TMR_00028	tmRNA links to Rfam database...	0.41	0.41	0.42	40	62739	59	12	44	3	57
TMR_00030	tmRNA links to Rfam database...	0.17	0.15	0.18	17	75761	82	11	66	5	94
TMR_00034	tmRNA links to Rfam database...	0.66	0.63	0.70	69	59933	34	9	20	5	41
TMR_00035	tmRNA links to Rfam database...	0.37	0.34	0.41	33	67815	54	8	40	6	65
TMR_00036	tmRNA links to Rfam database...	0.54	0.50	0.57	51	90436	55	11	27	17	50
TMR_00038	tmRNA links to Rfam database...	0.22	0.20	0.25	22	71166	68	9	56	3	88
TMR_00042	tmRNA links to Rfam database...	0.20	0.18	0.23	18	62757	63	8	52	3	80
TMR_00046	tmRNA links to Rfam database...	0.61	0.56	0.66	54	62753	34	4	24	6	42
TMR_00047	tmRNA links to Rfam database...	0.28	0.32	0.25	18	48445	64	15	38	11	39
TMR_00048	tmRNA links to Rfam database...	0.39	0.34	0.46	32	64911	46	2	35	9	63
TMR_00049	tmRNA links to Rfam database...	0.52	0.53	0.51	46	63100	56	9	35	12	41
TMR_00051	tmRNA links to Rfam database...	0.67	0.61	0.75	57	65627	36	1	18	17	37
TMR_00055	tmRNA links to Rfam database...	0.24	0.20	0.28	23	78922	58	8	50	0	91
TMR_00057	tmRNA links to Rfam database...	0.14	0.16	0.13	13	73819	98	23	65	10	66
TMR_00061	tmRNA links to Rfam database...	0.25	0.25	0.25	25	59584	83	12	64	7	74
TMR_00062	tmRNA links to Rfam database...	0.60	0.56	0.64	58	78515	40	9	24	7	46
TMR_00064	tmRNA links to Rfam database...	0.42	0.38	0.48	39	76946	50	17	26	7	64
TMR_00065	tmRNA links to Rfam database...	0.53	0.43	0.66	46	76566	25	10	14	1	60
TMR_00067	tmRNA links to Rfam database...	0.37	0.37	0.38	42	82103	74	9	61	4	72
TMR_00073	tmRNA links to Rfam database...	0.59	0.37	0.93	43	65657	4	0	3	1	74
TMR_00076	tmRNA links to Rfam database...	0.34	0.34	0.34	34	70776	72	14	52	6	66
TMR_00080	tmRNA links to Rfam database...	0.54	0.40	0.75	38	70449	13	3	10	0	58
TMR_00081	tmRNA links to Rfam database...	0.48	0.41	0.57	43	67086	33	7	25	1	63
TMR_00082	tmRNA links to Rfam database...	0.48	0.43	0.53	41	67819	38	11	25	2	55
TMR_00083	tmRNA links to Rfam database...	0.45	0.43	0.47	45	68169	59	10	41	8	60
TMR_00092	tmRNA links to Rfam database...	0.58	0.58	0.58	59	67426	44	13	30	1	42
TMR_00093	tmRNA links to Rfam database...	0.45	0.46	0.44	47	64153	63	15	46	2	55
TMR_00096	tmRNA links to Rfam database...	0.47	0.39	0.56	39	64910	36	9	22	5	61
TMR_00101	tmRNA links to Rfam database...	0.30	0.26	0.35	28	64182	53	10	41	2	79
TMR_00102	tmRNA links to Rfam database...	0.28	0.29	0.28	29	64157	78	16	59	3	72
TMR_00103	tmRNA links to Rfam database...	0.60	0.56	0.65	60	64169	36	6	26	4	48
TMR_00104	-	0.09	0.10	0.08	7	66711	82	29	48	5	63
TMR_00106	tmRNA links to Rfam database...	0.47	0.33	0.68	39	90043	21	6	12	3	81
TMR_00109	tmRNA links to Rfam database...	0.44	0.34	0.58	42	88337	34	7	24	3	80
TMR_00111	tmRNA links to Rfam database...	0.38	0.29	0.49	35	90454	40	3	33	4	87
TMR_00116	tmRNA links to Rfam database...	0.61	0.56	0.67	58	64893	39	2	27	10	46
TMR_00117	tmRNA links to Rfam database...	0.60	0.60	0.60	71	80082	56	7	40	9	47
TMR_00118	tmRNA links to Rfam database...	0.38	0.37	0.39	44	81292	77	3	67	7	76
TMR_00119	tmRNA links to Rfam database...	0.50	0.49	0.51	51	71910	54	9	40	5	53
TMR_00123	tmRNA links to Rfam database...	0.32	0.27	0.39	27	66360	48	7	36	5	74
TMR_00124	tmRNA links to Rfam database...	0.45	0.42	0.48	41	70414	52	12	33	7	57
TMR_00125	tmRNA links to Rfam database...	0.22	0.20	0.25	20	64181	64	15	45	4	79
TMR_00127	tmRNA links to Rfam database...	0.52	0.49	0.55	48	62747	47	5	35	7	49
TMR_00128	tmRNA links to Rfam database...	0.34	0.33	0.35	32	60984	59	10	49	0	64
TMR_00131	tmRNA links to Rfam database...	0.29	0.27	0.30	27	64891	68	12	50	6	72
TMR_00135	tmRNA links to Rfam database...	0.62	0.55	0.70	54	62758	31	2	21	8	45
TMR_00136	tmRNA links to Rfam database...	0.21	0.21	0.22	21	74596	77	16	58	3	80
TMR_00137	tmRNA links to Rfam database...	0.17	0.17	0.18	15	60992	78	7	61	10	74
TMR_00139	tmRNA links to Rfam database...	0.58	0.60	0.55	55	62028	51	19	26	6	36
TMR_00140	tmRNA links to Rfam database...	0.51	0.50	0.53	50	73825	61	3	42	16	50
TMR_00142	tmRNA links to Rfam database...	0.42	0.35	0.50	36	70804	43	5	31	7	66
TMR_00143	tmRNA links to Rfam database...	0.48	0.46	0.50	47	64526	57	8	39	10	56
TMR_00144	tmRNA links to Rfam database...	0.30	0.25	0.36	26	74232	52	7	40	5	77
TMR_00146	tmRNA links to Rfam database...	0.84	0.88	0.80	37	32085	30	6	3	21	5
TMR_00150	tmRNA links to Rfam database...	0.74	0.62	0.90	26	43042	21	0	3	18	16
TMR_00152	tmRNA links to Rfam database...	0.27	0.26	0.29	30	81302	84	10	64	10	85
TMR_00155	tmRNA links to Rfam database...	0.53	0.33	0.85	34	61736	14	0	6	8	70
TMR_00156	tmRNA links to Rfam database...	0.25	0.24	0.27	23	60294	65	11	50	4	74
TMR_00158	tmRNA links to Rfam database...	0.48	0.37	0.61	37	60665	28	3	21	4	62
TMR_00159	tmRNA links to Rfam database...	0.36	0.30	0.42	28	62062	39	10	28	1	64
TMR_00160	tmRNA links to Rfam database...	0.50	0.44	0.56	42	64545	41	8	25	8	53
TMR_00164	tmRNA links to Rfam database...	0.38	0.34	0.43	36	66711	56	8	40	8	70
TMR_00165	tmRNA links to Rfam database...	0.31	0.32	0.31	31	61675	79	12	58	9	66
TMR_00166	tmRNA links to Rfam database...	0.26	0.20	0.35	20	61719	40	4	33	3	81
TMR_00168	tmRNA links to Rfam database...	0.69	0.66	0.72	75	60971	33	3	26	4	39
TMR_00173	tmRNA links to Rfam database...	0.31	0.36	0.28	15	42141	56	15	24	17	27
TMR_00179	tmRNA links to Rfam database...	0.55	0.56	0.54	55	67059	57	10	37	10	43
TMR_00180	tmRNA links to Rfam database...	0.65	0.66	0.65	65	67061	48	8	27	13	34
TMR_00182	tmRNA links to Rfam database...	0.10	0.10	0.11	10	66343	81	11	66	4	92
TMR_00183	tmRNA links to Rfam database...	0.19	0.17	0.20	18	63102	76	5	65	6	85
TMR_00184	tmRNA links to Rfam database...	0.44	0.39	0.51	40	63111	41	4	35	2	62
TMR_00193	tmRNA links to Rfam database...	0.47	0.44	0.50	35	59270	44	9	26	9	45
TMR_00194	tmRNA links to Rfam database...	0.50	0.46	0.54	43	62756	43	9	27	7	50
TMR_00196	tmRNA links to Rfam database...	0.42	0.28	0.63	27	61032	22	4	12	6	70
TMR_00199	tmRNA links to Rfam database...	0.59	0.58	0.60	53	62747	42	14	21	7	39
TMR_00200	-	0.57	0.56	0.58	42	41544	41	3	27	11	33
TMR_00204	tmRNA links to Rfam database...	0.39	0.31	0.49	30	60317	38	6	25	7	67
TMR_00207	tmRNA links to Rfam database...	0.37	0.35	0.38	36	72296	65	3	55	7	67
TMR_00223	tmRNA links to Rfam database...	0.21	0.19	0.24	18	64186	61	11	46	4	77
TMR_00224	tmRNA links to Rfam database...	0.41	0.43	0.40	43	64872	66	10	55	1	58
TMR_00226	tmRNA links to Rfam database...	0.45	0.42	0.48	44	69659	54	10	38	6	61
TMR_00227	tmRNA links to Rfam database...	0.30	0.28	0.34	28	70042	58	9	46	3	73
TMR_00228	tmRNA links to Rfam database...	0.26	0.27	0.25	29	88296	92	23	62	7	79
TMR_00234	tmRNA links to Rfam database...	0.30	0.27	0.33	28	58912	59	6	50	3	74
TMR_00238	tmRNA links to Rfam database...	0.34	0.35	0.34	35	84562	76	10	59	7	66
TMR_00239	tmRNA links to Rfam database...	0.50	0.50	0.49	48	61679	51	9	40	2	48
TMR_00240	tmRNA links to Rfam database...	0.30	0.21	0.43	18	63148	27	7	17	3	67
TMR_00246	-	0.64	0.59	0.69	20	78181	77	0	9	68	14
TMR_00248	tmRNA links to Rfam database...	0.17	0.18	0.17	7	54243	53	15	20	18	31
TMR_00257	tmRNA links to Rfam database...	0.08	0.07	0.09	7	67080	78	7	67	4	91
TMR_00259	tmRNA links to Rfam database...	0.58	0.55	0.62	57	67804	38	10	25	3	46
TMR_00261	tmRNA links to Rfam database...	0.55	0.54	0.56	55	66697	44	14	29	1	46
TMR_00262	tmRNA links to Rfam database...	0.61	0.54	0.68	56	74223	26	9	17	0	48
TMR_00271	tmRNA links to Rfam database...	0.54	0.48	0.60	44	64188	33	6	23	4	47
TMR_00274	tmRNA links to Rfam database...	0.30	0.30	0.29	32	66685	84	13	65	6	73
TMR_00278	tmRNA links to Rfam database...	0.45	0.45	0.44	46	67792	67	5	53	9	56
TMR_00279	tmRNA links to Rfam database...	0.52	0.49	0.55	46	68923	48	8	29	11	48
TMR_00280	tmRNA links to Rfam database...	0.55	0.50	0.60	50	65983	46	4	29	13	51
TMR_00283	tmRNA links to Rfam database...	0.56	0.46	0.69	44	65277	23	9	11	3	52
TMR_00289	tmRNA links to Rfam database...	0.59	0.56	0.61	55	67071	47	5	30	12	43
TMR_00290	tmRNA links to Rfam database...	0.21	0.22	0.21	20	64165	84	14	62	8	72
TMR_00296	tmRNA links to Rfam database...	0.32	0.23	0.45	23	68955	33	7	21	5	75
TMR_00298	tmRNA links to Rfam database...	0.48	0.50	0.48	50	68160	63	10	45	8	51
TMR_00300	tmRNA links to Rfam database...	0.46	0.43	0.49	48	70402	59	10	40	9	64
TMR_00301	tmRNA links to Rfam database...	0.50	0.33	0.74	32	82172	11	3	8	0	64
TMR_00302	tmRNA links to Rfam database...	0.22	0.22	0.22	21	77325	79	19	56	4	73
TMR_00305	tmRNA links to Rfam database...	0.72	0.66	0.79	67	60990	26	3	15	8	35
TMR_00306	tmRNA links to Rfam database...	0.27	0.25	0.28	27	64165	69	11	58	0	79
TMR_00310	tmRNA links to Rfam database...	0.67	0.64	0.69	63	63812	32	5	23	4	35
TMR_00317	tmRNA links to Rfam database...	0.62	0.63	0.61	64	68160	45	14	27	4	38
TMR_00331	tmRNA links to Rfam database...	0.69	0.67	0.71	55	66717	35	3	20	12	27
TMR_00332	tmRNA links to Rfam database...	0.35	0.30	0.42	30	67089	47	8	34	5	69
TMR_00334	tmRNA links to Rfam database...	0.27	0.23	0.33	23	66726	51	7	39	5	78
TMR_00337	tmRNA links to Rfam database...	0.54	0.48	0.60	57	82933	42	13	25	4	62
TMR_00340	tmRNA links to Rfam database...	0.49	0.38	0.62	31	64211	34	5	14	15	50
TMR_00341	tmRNA links to Rfam database...	0.21	0.21	0.22	19	63102	72	18	51	3	73
TMR_00343	tmRNA links to Rfam database...	0.43	0.38	0.48	40	64896	51	4	40	7	65
TMR_00345	tmRNA links to Rfam database...	0.65	0.55	0.77	57	63829	24	2	15	7	47
TMR_00346	tmRNA links to Rfam database...	0.49	0.52	0.46	49	64154	60	15	43	2	45
TMR_00348	tmRNA links to Rfam database...	0.13	0.07	0.23	7	77391	40	4	19	17	92
TMR_00352	tmRNA links to Rfam database...	0.20	0.16	0.25	12	95218	60	12	24	24	63
TMR_00353	tmRNA links to Rfam database...	0.48	0.46	0.50	48	84159	57	17	31	9	57
TMR_00357	tmRNA links to Rfam database...	0.44	0.40	0.48	37	82951	54	13	27	14	55
TMR_00358	tmRNA links to Rfam database...	0.56	0.49	0.63	49	75000	42	14	15	13	50
TMR_00361	-	0.30	0.33	0.27	24	93438	84	23	43	18	48
TMR_00366	tmRNA links to Rfam database...	0.33	0.31	0.36	31	67809	68	11	45	12	69
TMR_00372	tmRNA links to Rfam database...	0.60	0.59	0.61	57	70406	48	6	31	11	39
TMR_00374	tmRNA links to Rfam database...	0.22	0.23	0.21	21	81708	84	20	61	3	71
TMR_00375	tmRNA links to Rfam database...	0.50	0.50	0.50	49	73438	59	11	38	10	49
TMR_00376	tmRNA links to Rfam database...	0.53	0.47	0.59	45	74615	46	11	20	15	50
TMR_00378	tmRNA links to Rfam database...	0.29	0.25	0.34	24	67826	54	7	39	8	73
TMR_00383	tmRNA links to Rfam database...	0.36	0.26	0.51	26	66744	33	6	19	8	74
TMR_00384	tmRNA links to Rfam database...	0.29	0.24	0.36	26	65630	51	2	45	4	82
TMR_00393	tmRNA links to Rfam database...	0.58	0.62	0.54	33	53240	50	12	16	22	20
TMR_00395	tmRNA links to Rfam database...	0.47	0.36	0.63	39	64558	27	3	20	4	70
TMR_00398	tmRNA links to Rfam database...	0.64	0.56	0.75	59	65262	25	1	19	5	47
TMR_00399	tmRNA links to Rfam database...	0.35	0.31	0.41	29	64909	43	16	26	1	65
TMR_00404	tmRNA links to Rfam database...	0.41	0.37	0.45	34	67453	52	15	26	11	58
TMR_00408	tmRNA links to Rfam database...	0.65	0.64	0.67	56	65982	40	11	17	12	32
TMR_00409	tmRNA links to Rfam database...	0.64	0.63	0.64	29	68590	36	7	9	20	17
TMR_00411	tmRNA links to Rfam database...	0.28	0.24	0.32	21	61009	54	9	36	9	66
TMR_00415	tmRNA links to Rfam database...	0.47	0.35	0.65	35	67107	19	2	17	0	66
TMR_00419	tmRNA links to Rfam database...	0.30	0.30	0.31	33	81704	77	12	61	4	78
TMR_00422	tmRNA links to Rfam database...	0.54	0.55	0.53	51	67800	54	10	35	9	41
TMR_00423	tmRNA links to Rfam database...	0.08	0.10	0.08	7	63812	91	23	61	7	66
TMR_00427	tmRNA links to Rfam database...	0.38	0.25	0.57	24	67486	24	0	18	6	73
TMR_00429	tmRNA links to Rfam database...	0.51	0.50	0.52	54	74588	58	7	42	9	55
TMR_00430	tmRNA links to Rfam database...	0.32	0.23	0.45	25	82565	31	4	27	0	84
TMR_00431	tmRNA links to Rfam database...	0.73	0.67	0.79	37	51956	53	5	5	43	18
TMR_00432	tmRNA links to Rfam database...	0.25	0.22	0.27	23	79716	68	9	52	7	81
TMR_00433	tmRNA links to Rfam database...	0.43	0.38	0.49	40	80119	43	5	36	2	66
TMR_00439	tmRNA links to Rfam database...	0.45	0.42	0.49	42	68549	54	12	32	10	59
TMR_00441	tmRNA links to Rfam database...	0.13	0.10	0.17	8	62081	47	10	29	8	75
TMR_00443	tmRNA links to Rfam database...	0.41	0.31	0.55	32	67103	35	5	21	9	72
TMR_00448	tmRNA links to Rfam database...	0.60	0.47	0.78	43	62073	19	0	12	7	49
TMR_00451	tmRNA links to Rfam database...	0.18	0.17	0.19	15	63465	66	13	53	0	74
TMR_00457	tmRNA links to Rfam database...	0.45	0.41	0.49	42	78521	48	8	35	5	60
TMR_00458	tmRNA links to Rfam database...	0.25	0.16	0.38	15	63507	32	4	20	8	78
TMR_00460	tmRNA links to Rfam database...	0.47	0.42	0.51	45	79313	49	8	35	6	61
TMR_00465	tmRNA links to Rfam database...	0.28	0.26	0.30	24	64182	55	16	39	0	70
TMR_00469	tmRNA links to Rfam database...	0.41	0.42	0.40	42	64516	62	11	51	0	58
TMR_00472	tmRNA links to Rfam database...	0.38	0.33	0.43	32	64546	45	12	30	3	65
TMR_00478	tmRNA links to Rfam database...	0.42	0.38	0.46	38	71928	48	9	35	4	61
TMR_00498	tmRNA links to Rfam database...	0.45	0.45	0.45	45	68906	66	11	44	11	54
TMR_00499	tmRNA links to Rfam database...	0.20	0.21	0.19	21	64507	100	10	82	8	78
TMR_00501	tmRNA links to Rfam database...	0.46	0.40	0.52	37	62410	36	5	29	2	55
TMR_00502	tmRNA links to Rfam database...	0.31	0.30	0.33	28	75380	60	11	47	2	65
TMR_00503	tmRNA links to Rfam database...	0.39	0.33	0.45	37	67814	52	4	41	7	74
TMR_00519	tmRNA links to Rfam database...	0.14	0.15	0.14	14	63089	97	15	72	10	81
TMR_00520	tmRNA links to Rfam database...	0.51	0.41	0.62	41	63124	35	7	18	10	58
TMR_00522	tmRNA links to Rfam database...	0.48	0.38	0.62	37	63130	32	9	14	9	60
TMR_00528	tmRNA links to Rfam database...	0.32	0.15	0.65	15	63167	18	3	5	10	82
TMR_00540	tmRNA links to Rfam database...	0.48	0.35	0.68	36	73483	17	2	15	0	68
TMR_00541	tmRNA links to Rfam database...	0.52	0.51	0.52	54	61673	55	1	48	6	51
TMR_00544	tmRNA links to Rfam database...	0.52	0.53	0.51	57	89565	61	18	36	7	51
TMR_00547	tmRNA links to Rfam database...	0.50	0.45	0.56	45	65260	36	4	32	0	55
TMR_00553	tmRNA links to Rfam database...	0.40	0.38	0.43	31	48133	47	3	38	6	50
TMR_00559	tmRNA links to Rfam database...	0.42	0.41	0.44	41	62387	53	9	44	0	60
TMR_00560	tmRNA links to Rfam database...	0.49	0.37	0.67	36	61021	24	2	16	6	62
TMR_00562	tmRNA links to Rfam database...	0.24	0.23	0.25	23	72680	70	14	54	2	79
TMR_00563	tmRNA links to Rfam database...	0.37	0.39	0.35	40	75351	83	19	56	8	63
TMR_00566	tmRNA links to Rfam database...	0.50	0.31	0.79	31	60687	13	1	7	5	69
TMR_00568	tmRNA links to Rfam database...	0.52	0.35	0.78	35	60681	18	0	10	8	64
TMR_00570	tmRNA links to Rfam database...	0.52	0.35	0.77	34	60334	20	0	10	10	63
TMR_00571	tmRNA links to Rfam database...	0.50	0.33	0.75	33	60682	18	2	9	7	66
TMR_00576	tmRNA links to Rfam database...	0.59	0.56	0.63	57	60288	42	8	25	9	45
TMR_00579	tmRNA links to Rfam database...	0.28	0.31	0.25	28	80491	90	19	63	8	62
TMR_00580	tmRNA links to Rfam database...	0.38	0.25	0.57	25	60682	24	3	16	5	75
TMR_00581	tmRNA links to Rfam database...	0.38	0.35	0.41	34	62399	55	4	44	7	64
TMR_00584	tmRNA links to Rfam database...	0.58	0.55	0.62	53	60990	38	7	25	6	44
TMR_00586	tmRNA links to Rfam database...	0.28	0.25	0.32	24	61001	54	12	38	4	73
TMR_00587	tmRNA links to Rfam database...	0.69	0.66	0.73	66	61334	30	4	21	5	34
TMR_00588	tmRNA links to Rfam database...	0.30	0.27	0.34	27	77342	58	17	35	6	74
TMR_00594	tmRNA links to Rfam database...	0.24	0.24	0.24	25	79296	84	16	64	4	79
TMR_00596	tmRNA links to Rfam database...	0.24	0.23	0.25	22	78122	77	13	53	11	73
TMR_00599	tmRNA links to Rfam database...	0.18	0.18	0.18	13	63119	65	20	38	7	59
TMR_00600	tmRNA links to Rfam database...	0.13	0.12	0.15	14	79706	82	13	67	2	101
TMR_00601	tmRNA links to Rfam database...	0.38	0.17	0.88	7	58988	33	0	1	32	35
TMR_00603	tmRNA links to Rfam database...	0.68	0.65	0.72	28	60339	61	6	5	50	15
TMR_00604	tmRNA links to Rfam database...	0.69	0.63	0.76	70	62743	24	3	19	2	42
TMR_00605	tmRNA links to Rfam database...	0.53	0.47	0.61	51	74221	35	9	24	2	57
TMR_00606	tmRNA links to Rfam database...	0.41	0.40	0.43	43	68905	65	3	55	7	64
TMR_00609	tmRNA links to Rfam database...	0.67	0.63	0.71	71	63446	29	8	21	0	42
TMR_00610	tmRNA links to Rfam database...	0.61	0.60	0.62	62	62028	45	6	32	7	42
TMR_00611	tmRNA links to Rfam database...	0.62	0.59	0.65	60	61332	36	7	26	3	42
TMR_00612	tmRNA links to Rfam database...	0.43	0.41	0.44	43	60629	61	5	49	7	61
TMR_00614	tmRNA links to Rfam database...	0.32	0.30	0.35	31	60986	64	3	55	6	73
TMR_00615	tmRNA links to Rfam database...	0.37	0.32	0.43	31	63831	51	11	30	10	65
TMR_00616	tmRNA links to Rfam database...	0.40	0.38	0.41	38	67068	60	10	45	5	61
TMR_00617	tmRNA links to Rfam database...	0.52	0.41	0.65	24	34679	23	4	9	10	34
TMR_00623	tmRNA links to Rfam database...	0.41	0.39	0.44	42	61329	57	2	52	3	66
TMR_00624	tmRNA links to Rfam database...	0.44	0.41	0.47	44	62388	59	2	47	10	64
TMR_00625	tmRNA links to Rfam database...	0.22	0.23	0.21	24	78888	95	26	65	4	82
TMR_00626	tmRNA links to Rfam database...	0.40	0.39	0.42	42	67796	60	12	46	2	67
TMR_00680	tmRNA links to Rfam database...	0.30	0.26	0.34	26	67820	53	9	41	3	73
TMR_00681	tmRNA links to Rfam database...	0.55	0.46	0.65	45	65997	34	2	22	10	52
TMR_00683	tmRNA links to Rfam database...	0.15	0.11	0.20	11	82974	51	9	34	8	89
TMR_00686	tmRNA links to Rfam database...	0.46	0.45	0.47	49	71148	67	12	44	11	59
TMR_00687	tmRNA links to Rfam database...	0.39	0.38	0.40	42	71526	73	9	54	10	69
TMR_00696	tmRNA links to Rfam database...	0.14	0.11	0.16	13	84999	75	15	51	9	101
TMR_00698	tmRNA links to Rfam database...	0.55	0.49	0.61	51	63107	35	6	26	3	53
TMR_00699	tmRNA links to Rfam database...	0.31	0.29	0.34	30	67072	61	6	53	2	72
TMR_00702	tmRNA links to Rfam database...	0.13	0.11	0.15	11	67090	64	6	54	4	89
TMR_00703	tmRNA links to Rfam database...	0.37	0.31	0.44	31	67457	44	7	33	4	68
TMR_00706	tmRNA links to Rfam database...	0.64	0.57	0.72	59	66348	26	6	17	3	44
TMR_00711	tmRNA links to Rfam database...	0.57	0.58	0.56	57	67795	48	16	28	4	41
TMR_00712	tmRNA links to Rfam database...	0.21	0.19	0.23	21	78515	79	14	56	9	88
TMR_00716	tmRNA links to Rfam database...	0.26	0.20	0.34	20	62776	39	7	32	0	80

^top

Matthews Correlation Coeffient, Sensitivity and Positive Predictive Value have been calculated based on the paper by Gardener & Giegerich, 2004.

Table of contents:

Overview

Performance plots

Performance of IPknot - scored higher in this pairwise comparison

1. Total counts & total scores for IPknot

2. Individual counts for IPknot [ download as .csv ]

Performance of Sfold - scored lower in this pairwise comparison

1. Total counts & total scores for Sfold

2. Individual counts for Sfold [ download as .csv ]