CompaRNA - on-line benchmarks of RNA structure prediction methods

Laboratory of Structural Bioinformatics @ Adam Mickiewicz University in Poznan

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Overview

Metric	MXScarna(seed)		UNAFold
MCC	0.595	>	0.544
Average MCC ± 95% Confidence Intervals	0.581 ± 0.023	>	0.538 ± 0.018
Sensitivity	0.475	<	0.530
Positive Predictive Value	0.747	>	0.560
Total TP	13936	<	15574
Total TN	17774151	>	17764982
Total FP	5886	<	14292
Total FP CONTRA	642	<	1785
Total FP INCONS	4087	<	10475
Total FP COMP	1157	<	2032
Total FN	15422	>	13784
P-value	3.56938820447e-08

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Performance plots

Comparison of performance of MXScarna(seed) and UNAFold. Positive Predictive Value (PPV) is plotted against sensitivity. Each dot represents a single test of each method. See tables below for raw data (individual counts for MXScarna(seed) and UNAFold).
Average Matthews Correlation Coefficients (MCC) with 95% confidence intervals (CIs) were plotted for different RNA families, for which at least 3 members were present in the benchmarking dataset. 'n' denotes the number of MCCs used to calculate the average and CI. See tables below for raw data (individual counts for MXScarna(seed) and UNAFold).
Comparison of average Matthews Correlation Coefficients (MCCs) for MXScarna(seed) and UNAFold. The whiskers correspond to 95% confidence intervals (CIs). 'n' denotes the number of MCCs used to calculate average MCCs and CIs. See tables below for raw data (individual counts for MXScarna(seed) and UNAFold).

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Performance of MXScarna(seed) - scored higher in this pairwise comparison

1. Total counts & total scores for MXScarna(seed)

Total Base Pair Counts
Total TP	13936
Total TN	17774151
Total FP	5886
Total FP CONTRA	642
Total FP INCONS	4087
Total FP COMP	1157
Total FN	15422

Total Scores
MCC	0.595
Average MCC ± 95% Confidence Intervals	0.581 ± 0.023
Sensitivity	0.475
Positive Predictive Value	0.747
Nr of predictions	282

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2. Individual counts for MXScarna(seed) [ download as .csv ]

RNA Chain	Rfam family	MCC	SENS	PPV	TP	TN	FP	FP CONTRA	FP INCONS	FP COMP	FN
ASE_00001	RNaseP_arch links to Rfam database...	0.67	0.51	0.88	38	34148	6	0	5	1	37
ASE_00002	RNaseP_arch links to Rfam database...	0.68	0.53	0.87	39	35466	7	1	5	1	34
ASE_00004	RNaseP_bact_a links to Rfam database...	0.52	0.41	0.65	40	47833	24	4	18	2	57
ASE_00005	RNaseP_bact_a links to Rfam database...	0.72	0.57	0.92	67	57897	8	2	4	2	50
ASE_00006	RNaseP_bact_a links to Rfam database...	0.51	0.41	0.63	38	47526	25	3	19	3	55
ASE_00007	RNaseP_bact_a links to Rfam database...	0.82	0.75	0.90	83	59593	12	4	5	3	27
ASE_00009	RNaseP_arch links to Rfam database...	0.68	0.57	0.81	38	26059	10	1	8	1	29
ASE_00012	RNaseP_bact_a links to Rfam database...	0.64	0.55	0.75	68	73829	26	4	19	3	55
ASE_00014	RNaseP_arch links to Rfam database...	0.67	0.52	0.87	55	54222	9	0	8	1	51
ASE_00017	RNaseP_nuc links to Rfam database...	0.49	0.41	0.59	26	50996	36	2	16	18	38
ASE_00018	RNaseP_bact_a links to Rfam database...	0.77	0.64	0.91	86	80507	11	2	6	3	48
ASE_00020	RNaseP_bact_a links to Rfam database...	0.50	0.36	0.71	45	73857	21	6	12	3	81
ASE_00021	RNaseP_bact_a links to Rfam database...	0.49	0.36	0.66	57	104110	34	4	25	5	103
ASE_00022	RNaseP_bact_b links to Rfam database...	0.66	0.58	0.75	72	82932	31	5	19	7	52
ASE_00023	RNaseP_bact_a links to Rfam database...	0.27	0.20	0.37	25	84188	47	2	40	5	102
ASE_00025	RNaseP_nuc links to Rfam database...	0.53	0.42	0.67	30	78561	28	0	15	13	41
ASE_00026	RNaseP_bact_a links to Rfam database...	0.74	0.65	0.85	72	59600	18	5	8	5	38
ASE_00028	RNaseP_bact_b links to Rfam database...	0.69	0.60	0.78	76	84569	29	5	16	8	50
ASE_00029	RNaseP_bact_a links to Rfam database...	0.24	0.18	0.32	22	82960	50	6	40	4	100
ASE_00030	RNaseP_bact_a links to Rfam database...	0.65	0.46	0.91	67	85417	9	3	4	2	78
ASE_00031	RNaseP_bact_a links to Rfam database...	0.31	0.23	0.43	29	86668	41	3	36	2	97
ASE_00032	RNaseP_bact_a links to Rfam database...	0.20	0.15	0.28	18	80135	55	0	47	8	100
ASE_00033	RNaseP_bact_a links to Rfam database...	0.77	0.67	0.89	81	64889	14	3	7	4	40
ASE_00035	RNaseP_bact_a links to Rfam database...	0.75	0.66	0.86	78	70409	18	3	10	5	40
ASE_00036	RNaseP_bact_a links to Rfam database...	0.60	0.50	0.73	66	75764	28	3	22	3	66
ASE_00037	RNaseP_bact_a links to Rfam database...	0.86	0.79	0.94	87	59247	9	2	4	3	23
ASE_00038	RNaseP_bact_a links to Rfam database...	0.69	0.56	0.84	57	53560	14	1	10	3	44
ASE_00040	RNaseP_bact_a links to Rfam database...	0.69	0.59	0.80	78	78906	22	4	15	3	55
ASE_00041	RNaseP_bact_a links to Rfam database...	0.80	0.72	0.90	78	57543	12	2	7	3	30
ASE_00042	RNaseP_bact_a links to Rfam database...	0.68	0.52	0.87	76	90013	14	1	10	3	69
ASE_00044	RNaseP_bact_a links to Rfam database...	0.85	0.78	0.93	82	54527	9	3	3	3	23
ASE_00046	RNaseP_bact_a links to Rfam database...	0.76	0.66	0.87	68	50325	13	1	9	3	35
ASE_00047	RNaseP_bact_a links to Rfam database...	0.74	0.60	0.92	78	74220	8	2	5	1	52
ASE_00052	RNaseP_bact_a links to Rfam database...	0.64	0.55	0.75	62	61342	24	3	18	3	50
ASE_00053	RNaseP_bact_a links to Rfam database...	0.60	0.47	0.76	63	79318	24	4	16	4	70
ASE_00057	RNaseP_bact_a links to Rfam database...	0.71	0.57	0.88	77	82127	14	4	7	3	57
ASE_00064	RNaseP_bact_a links to Rfam database...	0.82	0.71	0.94	63	45384	7	1	3	3	26
ASE_00066	RNaseP_bact_a links to Rfam database...	0.71	0.57	0.88	74	72306	11	3	7	1	56
ASE_00068	RNaseP_bact_a links to Rfam database...	0.67	0.52	0.88	44	37625	8	1	5	2	41
ASE_00069	RNaseP_bact_a links to Rfam database...	0.62	0.49	0.79	69	82941	22	3	15	4	71
ASE_00074	RNaseP_bact_a links to Rfam database...	0.81	0.70	0.94	83	67808	9	2	3	4	36
ASE_00075	RNaseP_bact_a links to Rfam database...	0.49	0.35	0.69	56	108730	31	3	22	6	106
ASE_00076	RNaseP_bact_a links to Rfam database...	0.42	0.32	0.55	38	68196	33	2	29	2	80
ASE_00077	RNaseP_bact_a links to Rfam database...	0.77	0.70	0.85	60	45079	14	4	7	3	26
ASE_00078	RNaseP_bact_a links to Rfam database...	0.79	0.72	0.87	60	43002	13	2	7	4	23
ASE_00079	RNaseP_bact_a links to Rfam database...	0.41	0.33	0.52	33	55548	32	1	29	2	67
ASE_00080	RNaseP_bact_a links to Rfam database...	0.37	0.30	0.47	37	71552	44	6	36	2	86
ASE_00081	RNaseP_bact_a links to Rfam database...	0.76	0.67	0.87	65	49695	13	2	8	3	32
ASE_00082	RNaseP_bact_a links to Rfam database...	0.35	0.24	0.50	28	70444	31	1	27	3	88
ASE_00083	RNaseP_bact_a links to Rfam database...	0.71	0.56	0.89	62	62411	11	1	7	3	48
ASE_00084	RNaseP_bact_a links to Rfam database...	0.71	0.59	0.85	58	53560	14	1	9	4	41
ASE_00087	RNaseP_bact_a links to Rfam database...	0.31	0.21	0.46	30	88345	36	0	35	1	114
ASE_00090	RNaseP_bact_a links to Rfam database...	0.66	0.54	0.81	55	55543	16	2	11	3	46
ASE_00092	RNaseP_bact_a links to Rfam database...	0.56	0.43	0.73	49	63479	21	2	16	3	64
ASE_00096	RNaseP_bact_a links to Rfam database...	0.41	0.30	0.55	35	63482	31	1	28	2	80
ASE_00099	RNaseP_bact_a links to Rfam database...	0.83	0.73	0.96	87	64529	7	2	2	3	33
ASE_00100	RNaseP_nuc links to Rfam database...	0.54	0.41	0.70	31	82171	27	1	12	14	45
ASE_00102	RNaseP_bact_a links to Rfam database...	0.47	0.34	0.63	57	117765	36	5	28	3	109
ASE_00104	RNaseP_bact_a links to Rfam database...	0.82	0.73	0.93	87	64167	10	2	5	3	32
ASE_00105	RNaseP_bact_a links to Rfam database...	0.51	0.38	0.70	42	64201	21	5	13	3	69
ASE_00107	RNaseP_bact_a links to Rfam database...	0.78	0.68	0.91	86	73058	12	2	7	3	41
ASE_00108	RNaseP_nuc links to Rfam database...	0.54	0.43	0.68	27	46931	25	0	13	12	36
ASE_00111	RNaseP_nuc links to Rfam database...	0.68	0.54	0.86	31	50050	23	0	5	18	26
ASE_00112	RNaseP_bact_a links to Rfam database...	0.32	0.25	0.42	29	75397	42	7	33	2	87
ASE_00115	RNaseP_bact_a links to Rfam database...	0.54	0.43	0.68	43	54552	23	1	19	3	58
ASE_00116	RNaseP_arch links to Rfam database...	0.35	0.27	0.46	18	31587	22	1	20	1	48
ASE_00118	RNaseP_bact_a links to Rfam database...	0.39	0.30	0.50	31	60664	34	3	28	3	71
ASE_00119	RNaseP_bact_a links to Rfam database...	0.30	0.24	0.38	26	62767	43	2	40	1	82
ASE_00120	RNaseP_arch links to Rfam database...	0.72	0.57	0.92	54	46912	7	0	5	2	40
ASE_00121	RNaseP_arch links to Rfam database...	0.77	0.63	0.94	58	45088	5	0	4	1	34
ASE_00122	RNaseP_bact_a links to Rfam database...	0.66	0.58	0.75	51	43297	20	1	16	3	37
ASE_00123	RNaseP_bact_a links to Rfam database...	0.67	0.53	0.85	45	38450	10	2	6	2	40
ASE_00125	RNaseP_bact_a links to Rfam database...	0.68	0.51	0.90	45	39290	7	1	4	2	43
ASE_00128	RNaseP_bact_a links to Rfam database...	0.66	0.54	0.82	54	53235	15	1	11	3	46
ASE_00129	RNaseP_bact_a links to Rfam database...	0.68	0.53	0.88	59	62768	11	1	7	3	52
ASE_00131	RNaseP_bact_a links to Rfam database...	0.63	0.47	0.83	40	39292	10	1	7	2	45
ASE_00132	RNaseP_bact_a links to Rfam database...	0.48	0.40	0.57	38	50336	31	4	25	2	57
ASE_00134	RNaseP_bact_a links to Rfam database...	0.73	0.62	0.86	59	50334	13	1	9	3	36
ASE_00135	RNaseP_bact_a links to Rfam database...	0.40	0.32	0.51	35	63121	35	4	30	1	74
ASE_00136	RNaseP_bact_a links to Rfam database...	0.78	0.67	0.91	62	48137	9	1	5	3	30
ASE_00137	RNaseP_bact_a links to Rfam database...	0.53	0.43	0.66	42	48452	25	2	20	3	56
ASE_00138	RNaseP_bact_a links to Rfam database...	0.73	0.63	0.85	51	40410	13	3	6	4	30
ASE_00139	RNaseP_bact_a links to Rfam database...	0.48	0.35	0.67	36	54231	19	0	18	1	68
ASE_00140	RNaseP_bact_a links to Rfam database...	0.47	0.34	0.65	42	70811	26	3	20	3	83
ASE_00142	RNaseP_bact_a links to Rfam database...	0.79	0.70	0.89	86	67064	14	3	8	3	36
ASE_00145	RNaseP_arch links to Rfam database...	0.58	0.40	0.85	44	70073	9	0	8	1	67
ASE_00146	RNaseP_bact_a links to Rfam database...	0.78	0.66	0.92	82	70787	10	2	5	3	42
ASE_00148	RNaseP_arch links to Rfam database...	0.47	0.28	0.80	43	112521	12	0	11	1	111
ASE_00151	RNaseP_bact_a links to Rfam database...	0.79	0.71	0.88	70	51923	13	7	3	3	28
ASE_00153	RNaseP_nuc links to Rfam database...	0.60	0.48	0.76	35	57584	26	0	11	15	38
ASE_00154	RNaseP_arch links to Rfam database...	0.61	0.50	0.76	53	65271	18	4	13	1	54
ASE_00155	RNaseP_arch links to Rfam database...	0.54	0.35	0.83	50	93468	12	0	10	2	92
ASE_00163	RNaseP_bact_a links to Rfam database...	0.79	0.70	0.89	65	53228	11	2	6	3	28
ASE_00165	RNaseP_bact_a links to Rfam database...	0.56	0.43	0.74	43	52917	19	1	14	4	58
ASE_00168	RNaseP_nuc links to Rfam database...	0.59	0.48	0.72	31	60683	27	0	12	15	33
ASE_00169	RNaseP_bact_a links to Rfam database...	0.47	0.34	0.65	36	57236	22	1	18	3	71
ASE_00170	RNaseP_bact_a links to Rfam database...	0.71	0.62	0.82	58	48757	16	2	11	3	35
ASE_00171	RNaseP_bact_a links to Rfam database...	0.59	0.49	0.71	46	48451	22	1	18	3	48
ASE_00172	RNaseP_bact_a links to Rfam database...	0.59	0.46	0.75	49	58931	19	4	12	3	57
ASE_00174	RNaseP_bact_a links to Rfam database...	0.54	0.42	0.69	46	61008	24	3	18	3	63
ASE_00175	RNaseP_bact_a links to Rfam database...	0.71	0.55	0.91	59	59966	9	1	5	3	48
ASE_00176	RNaseP_bact_a links to Rfam database...	0.46	0.35	0.60	38	59968	27	1	24	2	72
ASE_00179	RNaseP_bact_a links to Rfam database...	0.57	0.49	0.66	41	44191	24	4	17	3	43
ASE_00180	RNaseP_bact_a links to Rfam database...	0.72	0.61	0.85	61	51288	14	2	9	3	39
ASE_00181	RNaseP_bact_a links to Rfam database...	0.59	0.45	0.76	48	57567	19	3	12	4	58
ASE_00182	RNaseP_bact_a links to Rfam database...	0.35	0.24	0.51	33	84190	33	3	29	1	103
ASE_00183	RNaseP_bact_a links to Rfam database...	0.65	0.52	0.81	59	61352	17	0	14	3	54
ASE_00184	RNaseP_bact_a links to Rfam database...	0.69	0.55	0.86	56	54550	12	0	9	3	46
ASE_00185	RNaseP_bact_a links to Rfam database...	0.23	0.16	0.32	21	73470	46	8	37	1	107
ASE_00186	RNaseP_bact_a links to Rfam database...	0.72	0.62	0.84	82	78905	21	2	14	5	50
ASE_00187	RNaseP_arch links to Rfam database...	0.58	0.43	0.78	49	68572	17	1	13	3	66
ASE_00189	RNaseP_bact_b links to Rfam database...	0.63	0.57	0.70	58	63107	35	5	20	10	44
ASE_00190	RNaseP_bact_b links to Rfam database...	0.53	0.42	0.67	38	45394	23	5	14	4	52
ASE_00192	RNaseP_bact_b links to Rfam database...	0.29	0.23	0.38	30	84588	51	6	42	3	103
ASE_00194	RNaseP_bact_b links to Rfam database...	0.60	0.50	0.71	60	73452	32	5	19	8	59
ASE_00196	RNaseP_arch links to Rfam database...	0.66	0.52	0.85	39	31580	9	0	7	2	36
ASE_00197	RNaseP_bact_a links to Rfam database...	0.67	0.55	0.82	80	89156	20	2	15	3	65
ASE_00198	RNaseP_bact_a links to Rfam database...	0.75	0.61	0.93	62	52583	8	1	4	3	40
ASE_00203	RNaseP_bact_a links to Rfam database...	0.56	0.47	0.68	45	46599	24	1	20	3	51
ASE_00204	RNaseP_bact_b links to Rfam database...	0.62	0.53	0.72	59	67814	30	6	17	7	53
ASE_00205	RNaseP_arch links to Rfam database...	0.71	0.59	0.85	53	45994	12	0	9	3	37
ASE_00209	RNaseP_arch links to Rfam database...	0.77	0.65	0.92	57	43009	7	0	5	2	31
ASE_00210	RNaseP_arch links to Rfam database...	0.69	0.54	0.90	35	27222	5	0	4	1	30
ASE_00212	RNaseP_bact_a links to Rfam database...	0.67	0.54	0.82	80	93864	20	2	15	3	68
ASE_00213	RNaseP_arch links to Rfam database...	0.65	0.48	0.86	32	27224	6	0	5	1	34
ASE_00214	RNaseP_bact_a links to Rfam database...	0.74	0.63	0.87	65	56205	13	2	8	3	38
ASE_00215	RNaseP_bact_a links to Rfam database...	0.38	0.26	0.54	26	48468	23	2	20	1	73
ASE_00216	RNaseP_bact_a links to Rfam database...	0.69	0.59	0.81	48	39281	14	3	8	3	34
ASE_00217	RNaseP_bact_a links to Rfam database...	0.81	0.71	0.93	64	40401	8	2	3	3	26
ASE_00221	RNaseP_bact_a links to Rfam database...	0.78	0.69	0.89	81	64529	13	2	8	3	36
ASE_00222	RNaseP_arch links to Rfam database...	0.47	0.27	0.82	42	112050	10	0	9	1	115
ASE_00227	RNaseP_bact_a links to Rfam database...	0.28	0.21	0.38	28	78930	47	1	44	2	105
ASE_00228	RNaseP_bact_a links to Rfam database...	0.62	0.51	0.76	44	46913	18	2	12	4	42
ASE_00229	RNaseP_bact_a links to Rfam database...	0.72	0.62	0.84	54	42422	13	1	9	3	33
ASE_00231	RNaseP_bact_a links to Rfam database...	0.49	0.40	0.60	38	47832	27	5	20	2	58
ASE_00232	RNaseP_bact_a links to Rfam database...	0.63	0.57	0.71	48	38435	23	4	16	3	36
ASE_00234	RNaseP_bact_a links to Rfam database...	0.23	0.17	0.32	22	75398	48	3	43	2	107
ASE_00237	RNaseP_nuc links to Rfam database...	0.56	0.48	0.66	27	45712	30	2	12	16	29
ASE_00238	RNaseP_bact_a links to Rfam database...	0.54	0.39	0.76	44	64203	17	3	11	3	70
ASE_00240	RNaseP_bact_a links to Rfam database...	0.61	0.49	0.74	46	46603	19	1	15	3	47
ASE_00241	RNaseP_bact_a links to Rfam database...	0.80	0.72	0.89	63	43885	11	2	6	3	24
ASE_00242	RNaseP_bact_a links to Rfam database...	0.82	0.75	0.90	84	60982	12	2	7	3	28
ASE_00246	RNaseP_nuc links to Rfam database...	0.60	0.48	0.74	32	48162	25	0	11	14	35
ASE_00247	RNaseP_nuc links to Rfam database...	0.59	0.48	0.72	31	54242	28	0	12	16	33
ASE_00248	RNaseP_bact_a links to Rfam database...	0.81	0.72	0.92	82	62392	11	2	5	4	32
ASE_00250	RNaseP_bact_a links to Rfam database...	0.60	0.49	0.73	64	78915	25	4	20	1	67
ASE_00252	RNaseP_bact_a links to Rfam database...	0.47	0.35	0.64	58	115350	37	4	28	5	110
ASE_00254	RNaseP_bact_a links to Rfam database...	0.67	0.59	0.77	48	36794	17	1	13	3	34
ASE_00255	RNaseP_bact_a links to Rfam database...	0.61	0.50	0.74	65	74603	26	5	18	3	65
ASE_00257	RNaseP_bact_a links to Rfam database...	0.72	0.58	0.90	56	50978	9	4	2	3	41
ASE_00259	RNaseP_bact_a links to Rfam database...	0.59	0.48	0.73	58	73073	28	1	21	6	63
ASE_00263	RNaseP_bact_a links to Rfam database...	0.52	0.39	0.68	47	70431	25	3	19	3	73
ASE_00264	RNaseP_nuc links to Rfam database...	0.28	0.14	0.56	14	49116	15	0	11	4	86
ASE_00267	RNaseP_bact_a links to Rfam database...	0.75	0.65	0.86	57	45084	12	2	7	3	31
ASE_00270	RNaseP_bact_a links to Rfam database...	0.39	0.27	0.56	35	72328	32	0	27	5	93
ASE_00274	RNaseP_bact_a links to Rfam database...	0.60	0.48	0.77	49	55547	18	1	14	3	54
ASE_00277	RNaseP_bact_a links to Rfam database...	0.60	0.48	0.75	44	48146	19	1	14	4	47
ASE_00279	RNaseP_bact_a links to Rfam database...	0.78	0.65	0.93	66	53230	8	2	3	3	35
ASE_00280	RNaseP_bact_a links to Rfam database...	0.73	0.62	0.85	61	51931	14	1	10	3	37
ASE_00281	RNaseP_bact_a links to Rfam database...	0.79	0.68	0.91	60	44485	9	2	4	3	28
ASE_00282	RNaseP_bact_a links to Rfam database...	0.48	0.35	0.65	45	77746	26	3	21	2	82
ASE_00283	RNaseP_bact_a links to Rfam database...	0.68	0.56	0.82	60	61703	16	2	11	3	47
ASE_00284	RNaseP_bact_a links to Rfam database...	0.67	0.54	0.84	58	58242	14	2	9	3	50
ASE_00285	RNaseP_bact_a links to Rfam database...	0.51	0.40	0.64	49	68930	30	2	25	3	73
ASE_00286	RNaseP_bact_a links to Rfam database...	0.68	0.58	0.82	53	46600	15	1	11	3	39
ASE_00287	RNaseP_bact_a links to Rfam database...	0.67	0.54	0.84	56	54879	14	2	9	3	47
ASE_00288	RNaseP_bact_a links to Rfam database...	0.64	0.54	0.77	50	45991	18	2	13	3	43
ASE_00289	RNaseP_bact_a links to Rfam database...	0.54	0.42	0.70	66	100931	31	3	25	3	91
ASE_00292	RNaseP_bact_a links to Rfam database...	0.77	0.65	0.92	90	81712	11	3	5	3	48
ASE_00294	RNaseP_bact_a links to Rfam database...	0.67	0.51	0.87	88	114380	16	2	11	3	83
ASE_00295	RNaseP_bact_a links to Rfam database...	0.76	0.63	0.92	82	73831	10	2	5	3	49
ASE_00296	RNaseP_bact_a links to Rfam database...	0.68	0.54	0.87	78	91716	15	3	9	3	67
ASE_00297	RNaseP_bact_a links to Rfam database...	0.62	0.50	0.77	49	52911	18	0	15	3	49
ASE_00298	RNaseP_bact_a links to Rfam database...	0.55	0.42	0.72	47	67463	21	4	14	3	66
ASE_00299	RNaseP_bact_a links to Rfam database...	0.32	0.24	0.42	24	49398	34	1	32	1	76
ASE_00313	RNaseP_nuc links to Rfam database...	0.39	0.20	0.75	18	62457	17	0	6	11	71
ASE_00316	RNaseP_nuc links to Rfam database...	0.27	0.17	0.41	17	107839	35	3	21	11	81
ASE_00318	RNaseP_bact_b links to Rfam database...	0.63	0.54	0.74	64	80113	37	6	17	14	54
ASE_00327	RNaseP_nuc links to Rfam database...	0.28	0.18	0.43	16	57254	24	1	20	3	73
ASE_00328	RNaseP_bact_b links to Rfam database...	0.73	0.66	0.80	74	72679	31	5	13	13	38
ASE_00330	RNaseP_nuc links to Rfam database...	0.28	0.17	0.47	15	56248	24	0	17	7	75
ASE_00332	RNaseP_bact_a links to Rfam database...	0.74	0.63	0.88	87	81711	15	2	10	3	51
ASE_00335	RNaseP_bact_b links to Rfam database...	0.72	0.66	0.78	76	75369	33	6	15	12	40
ASE_00337	RNaseP_nuc links to Rfam database...	0.35	0.24	0.50	17	39306	24	2	15	7	54
ASE_00338	RNaseP_nuc links to Rfam database...	0.31	0.19	0.50	19	66392	21	2	17	2	79
ASE_00339	RNaseP_bact_a links to Rfam database...	0.44	0.34	0.58	40	80131	37	3	26	8	79
ASE_00340	RNaseP_bact_a links to Rfam database...	0.51	0.45	0.59	38	45992	31	3	23	5	47
ASE_00342	RNaseP_bact_a links to Rfam database...	0.81	0.72	0.91	83	62390	11	3	5	3	32
ASE_00343	RNaseP_bact_a links to Rfam database...	0.27	0.20	0.35	23	83371	49	4	38	7	90
ASE_00346	RNaseP_arch links to Rfam database...	0.61	0.49	0.75	48	48141	18	2	14	2	49
ASE_00353	RNaseP_bact_a links to Rfam database...	0.69	0.56	0.86	60	57900	13	1	9	3	47
ASE_00359	RNaseP_arch links to Rfam database...	0.37	0.26	0.51	21	42737	24	1	19	4	59
ASE_00360	RNaseP_arch links to Rfam database...	0.78	0.63	0.98	41	29361	2	0	1	1	24
ASE_00361	RNaseP_bact_a links to Rfam database...	0.66	0.46	0.94	59	75403	7	1	3	3	68
ASE_00362	RNaseP_bact_a links to Rfam database...	0.76	0.66	0.88	60	48137	12	2	6	4	31
ASE_00363	RNaseP_bact_a links to Rfam database...	0.77	0.63	0.94	59	51297	7	1	3	3	35
ASE_00364	RNaseP_bact_a links to Rfam database...	0.70	0.57	0.87	60	54216	12	1	8	3	45
ASE_00366	RNaseP_bact_a links to Rfam database...	0.58	0.48	0.70	47	58586	23	6	14	3	51
ASE_00367	RNaseP_bact_a links to Rfam database...	0.79	0.71	0.88	61	43002	11	2	6	3	25
ASE_00369	RNaseP_bact_a links to Rfam database...	0.71	0.58	0.86	62	55873	13	1	9	3	45
ASE_00370	RNaseP_bact_a links to Rfam database...	0.81	0.71	0.92	60	41840	8	1	4	3	24
ASE_00372	RNaseP_bact_a links to Rfam database...	0.57	0.45	0.71	45	51940	21	2	16	3	55
ASE_00374	RNaseP_bact_a links to Rfam database...	0.79	0.68	0.91	60	44784	9	2	4	3	28
ASE_00375	RNaseP_bact_a links to Rfam database...	0.50	0.39	0.64	43	60311	26	1	23	2	67
ASE_00376	RNaseP_bact_a links to Rfam database...	0.65	0.55	0.76	58	56877	21	2	16	3	47
ASE_00377	RNaseP_bact_a links to Rfam database...	0.72	0.58	0.89	62	57560	11	1	7	3	45
ASE_00379	RNaseP_bact_a links to Rfam database...	0.76	0.66	0.87	59	45988	12	2	7	3	30
ASE_00380	RNaseP_bact_a links to Rfam database...	0.51	0.40	0.65	40	54884	24	1	21	2	59
ASE_00382	RNaseP_bact_a links to Rfam database...	0.79	0.71	0.88	60	41837	11	2	6	3	24
ASE_00383	RNaseP_bact_a links to Rfam database...	0.78	0.67	0.91	70	54538	10	2	5	3	35
ASE_00384	RNaseP_bact_a links to Rfam database...	0.72	0.61	0.85	56	48450	13	1	9	3	36
ASE_00385	RNaseP_bact_a links to Rfam database...	0.55	0.47	0.64	38	41846	24	3	18	3	43
ASE_00386	RNaseP_bact_a links to Rfam database...	0.75	0.61	0.92	59	50339	8	1	4	3	37
ASE_00387	RNaseP_bact_a links to Rfam database...	0.60	0.50	0.71	52	55872	25	2	19	4	52
ASE_00388	RNaseP_bact_a links to Rfam database...	0.74	0.64	0.85	57	45686	14	2	8	4	32
ASE_00390	RNaseP_bact_a links to Rfam database...	0.78	0.68	0.89	58	42130	10	2	5	3	27
ASE_00393	RNaseP_bact_a links to Rfam database...	0.68	0.57	0.82	53	47830	15	1	11	3	40
ASE_00394	RNaseP_bact_a links to Rfam database...	0.73	0.62	0.87	58	46904	12	1	8	3	35
ASE_00395	RNaseP_bact_a links to Rfam database...	0.82	0.71	0.94	60	41552	7	1	3	3	24
ASE_00396	RNaseP_bact_a links to Rfam database...	0.75	0.66	0.85	55	41551	12	2	8	2	28
ASE_00397	RNaseP_bact_a links to Rfam database...	0.74	0.61	0.90	64	54544	10	2	5	3	41
ASE_00398	RNaseP_bact_a links to Rfam database...	0.65	0.52	0.82	54	55879	15	0	12	3	50
ASE_00400	RNaseP_bact_a links to Rfam database...	0.45	0.37	0.56	39	57900	33	2	29	2	67
ASE_00401	RNaseP_bact_a links to Rfam database...	0.55	0.40	0.76	51	76961	19	0	16	3	75
ASE_00402	RNaseP_bact_a links to Rfam database...	0.83	0.74	0.94	63	42419	7	1	3	3	22
ASE_00403	RNaseP_bact_a links to Rfam database...	0.71	0.57	0.90	61	55877	10	1	6	3	46
ASE_00404	RNaseP_bact_a links to Rfam database...	0.78	0.67	0.90	57	43008	10	2	4	4	28
ASE_00406	RNaseP_bact_a links to Rfam database...	0.79	0.68	0.93	64	48759	8	2	3	3	30
ASE_00411	RNaseP_bact_a links to Rfam database...	0.59	0.48	0.72	43	49395	20	2	15	3	46
ASE_00412	RNaseP_bact_a links to Rfam database...	0.55	0.42	0.72	44	58250	20	1	16	3	61
ASE_00413	RNaseP_bact_a links to Rfam database...	0.68	0.57	0.82	46	44495	14	1	9	4	35
ASE_00414	RNaseP_bact_a links to Rfam database...	0.19	0.16	0.24	15	46298	48	3	44	1	80
ASE_00415	RNaseP_bact_a links to Rfam database...	0.39	0.31	0.48	32	54880	36	3	31	2	71
ASE_00416	RNaseP_bact_a links to Rfam database...	0.69	0.60	0.80	76	77326	23	3	16	4	51
ASE_00417	RNaseP_arch links to Rfam database...	0.78	0.63	0.95	63	54549	5	0	3	2	37
ASE_00418	RNaseP_arch links to Rfam database...	0.71	0.55	0.91	41	38736	6	0	4	2	34
ASE_00419	RNaseP_bact_a links to Rfam database...	0.59	0.49	0.72	50	54877	20	3	16	1	53
ASE_00422	RNaseP_bact_a links to Rfam database...	0.58	0.49	0.69	46	46904	24	3	18	3	48
ASE_00423	RNaseP_bact_a links to Rfam database...	0.81	0.72	0.90	79	56865	13	3	6	4	30
ASE_00426	RNaseP_bact_a links to Rfam database...	0.42	0.36	0.48	39	60994	42	3	39	0	69
ASE_00428	RNaseP_bact_a links to Rfam database...	0.69	0.60	0.80	75	76542	22	5	14	3	50
ASE_00430	RNaseP_bact_a links to Rfam database...	0.55	0.45	0.68	44	46906	24	1	20	3	53
ASE_00431	RNaseP_bact_a links to Rfam database...	0.27	0.22	0.34	21	46299	40	8	32	0	74
ASE_00434	RNaseP_bact_b links to Rfam database...	0.62	0.55	0.71	60	68180	34	5	20	9	50
ASE_00437	RNaseP_bact_a links to Rfam database...	0.58	0.50	0.69	67	79304	33	2	28	3	68
ASE_00438	RNaseP_bact_a links to Rfam database...	0.41	0.32	0.54	37	65997	33	6	26	1	79
ASE_00441	RNaseP_bact_a links to Rfam database...	0.32	0.24	0.43	27	64198	40	4	32	4	85
ASE_00447	RNaseP_bact_a links to Rfam database...	0.80	0.72	0.90	83	60286	12	2	7	3	33
ASE_00448	RNaseP_bact_a links to Rfam database...	0.80	0.72	0.88	81	64169	14	2	9	3	31
ASE_00451	RNaseP_bact_a links to Rfam database...	0.77	0.66	0.88	83	70782	14	2	9	3	42
CRW_00013	Intron_gpI links to Rfam database...	0.33	0.21	0.53	24	103695	23	4	17	2	91
CRW_00016	Intron_gpI links to Rfam database...	0.31	0.19	0.51	23	77376	24	7	15	2	97
CRW_00610	Intron_gpI links to Rfam database...	0.16	0.09	0.32	7	36293	15	1	14	0	74
CRW_00613	Intron_gpI links to Rfam database...	0.00	0.00	0.00	0	34956	24	7	17	0	78
CRW_00614	Intron_gpI links to Rfam database...	0.00	0.00	0.00	0	121749	22	4	18	0	57
CRW_00618	Intron_gpI links to Rfam database...	0.18	0.10	0.32	6	56261	13	1	12	0	55
CRW_00619	Intron_gpI links to Rfam database...	0.00	0.00	0.00	0	165006	19	2	17	0	73
CRW_00620	Intron_gpI links to Rfam database...	0.00	0.00	0.00	0	150963	16	0	12	4	63
CRW_00621	Intron_gpI links to Rfam database...	0.00	0.00	0.00	0	153149	34	7	25	2	71
CRW_00623	Intron_gpI links to Rfam database...	0.00	0.00	0.00	0	129785	17	1	9	7	83
CRW_00633	Intron_gpI links to Rfam database...	0.45	0.27	0.74	29	63507	14	0	10	4	77
CRW_00634	Intron_gpI links to Rfam database...	0.47	0.30	0.74	28	64582	18	0	10	8	66
CRW_00670	Intron_gpI links to Rfam database...	0.47	0.26	0.86	31	70089	7	0	5	2	89
CRW_00671	Intron_gpI links to Rfam database...	0.56	0.37	0.84	43	62784	10	0	8	2	74
CRW_00672	Intron_gpI links to Rfam database...	0.43	0.28	0.67	31	72344	17	0	15	2	80
CRW_00674	Intron_gpI links to Rfam database...	0.22	0.14	0.37	17	83390	29	5	24	0	107
CRW_00676	Intron_gpI links to Rfam database...	0.03	0.02	0.07	2	93500	31	4	22	5	113
CRW_00692	Intron_gpI links to Rfam database...	0.03	0.01	0.06	1	68619	22	0	15	7	89
PDB_00827	Intron_gpI links to Rfam database...	0.00	0.00	0.00	0	27011	17	1	16	0	81
PDB_00919	RNaseP_bact_a links to Rfam database...	0.27	0.21	0.35	22	44191	40	3	37	0	81
RFA_00597	Telomerase-vert links to Rfam database...	0.71	0.66	0.76	72	97808	43	8	15	20	37
RFA_00598	Telomerase-vert links to Rfam database...	0.72	0.68	0.77	69	84576	40	5	16	19	32
RFA_00599	Telomerase-vert links to Rfam database...	0.54	0.51	0.57	57	101375	62	5	38	19	54
RFA_00600	Telomerase-vert links to Rfam database...	0.53	0.49	0.57	49	120209	62	10	27	25	51
RFA_00601	Telomerase-vert links to Rfam database...	0.74	0.73	0.75	83	99124	49	4	24	21	31
RFA_00602	Telomerase-vert links to Rfam database...	0.69	0.68	0.69	79	101361	50	5	30	15	37
TMR_00173	tmRNA links to Rfam database...	0.41	0.31	0.54	13	42171	18	2	9	7	29
TMR_00357	tmRNA links to Rfam database...	0.19	0.13	0.28	12	82985	38	4	27	7	80
TMR_00601	tmRNA links to Rfam database...	0.67	0.62	0.72	26	58960	30	1	9	20	16
TMR_00603	tmRNA links to Rfam database...	0.78	0.70	0.88	30	60344	30	0	4	26	13
TMR_00611	tmRNA links to Rfam database...	0.48	0.35	0.65	36	61370	19	4	15	0	66
TMR_00696	tmRNA links to Rfam database...	0.35	0.25	0.51	28	85023	34	3	24	7	86

^top

Performance of UNAFold - scored lower in this pairwise comparison

1. Total counts & total scores for UNAFold

Total Base Pair Counts
Total TP	15574
Total TN	17764982
Total FP	14292
Total FP CONTRA	1785
Total FP INCONS	10475
Total FP COMP	2032
Total FN	13784

Total Scores
MCC	0.544
Average MCC ± 95% Confidence Intervals	0.538 ± 0.018
Sensitivity	0.530
Positive Predictive Value	0.560
Nr of predictions	282

^top

2. Individual counts for UNAFold [ download as .csv ]

RNA Chain	Rfam family	MCC	SENS	PPV	TP	TN	FP	FP CONTRA	FP INCONS	FP COMP	FN
ASE_00001	RNaseP_arch links to Rfam database...	0.63	0.61	0.66	46	34121	30	2	22	6	29
ASE_00002	RNaseP_arch links to Rfam database...	0.66	0.62	0.70	45	35447	24	3	16	5	28
ASE_00004	RNaseP_bact_a links to Rfam database...	0.71	0.70	0.72	68	47800	29	9	18	2	29
ASE_00005	RNaseP_bact_a links to Rfam database...	0.60	0.54	0.67	63	57876	35	1	30	4	54
ASE_00006	RNaseP_bact_a links to Rfam database...	0.67	0.66	0.68	61	47496	32	7	22	3	32
ASE_00007	RNaseP_bact_a links to Rfam database...	0.57	0.54	0.60	59	59587	43	1	38	4	51
ASE_00009	RNaseP_arch links to Rfam database...	0.78	0.75	0.81	50	26044	15	0	12	3	17
ASE_00012	RNaseP_bact_a links to Rfam database...	0.52	0.48	0.56	59	73814	52	4	43	5	64
ASE_00014	RNaseP_arch links to Rfam database...	0.24	0.25	0.24	26	54178	82	8	73	1	80
ASE_00017	RNaseP_nuc links to Rfam database...	0.26	0.28	0.24	18	50966	75	6	50	19	46
ASE_00018	RNaseP_bact_a links to Rfam database...	0.78	0.73	0.84	98	80484	21	4	15	2	36
ASE_00020	RNaseP_bact_a links to Rfam database...	0.57	0.54	0.60	68	73806	46	7	39	0	58
ASE_00021	RNaseP_bact_a links to Rfam database...	0.58	0.54	0.62	86	104057	60	7	46	7	74
ASE_00022	RNaseP_bact_b links to Rfam database...	0.46	0.45	0.48	56	82911	67	6	55	6	68
ASE_00023	RNaseP_bact_a links to Rfam database...	0.64	0.64	0.64	81	84129	48	5	40	3	46
ASE_00025	RNaseP_nuc links to Rfam database...	0.22	0.24	0.21	17	78526	115	12	51	52	54
ASE_00026	RNaseP_bact_a links to Rfam database...	0.53	0.51	0.54	56	59582	55	1	46	8	54
ASE_00028	RNaseP_bact_b links to Rfam database...	0.56	0.55	0.57	69	84545	60	8	44	8	57
ASE_00029	RNaseP_bact_a links to Rfam database...	0.37	0.36	0.38	44	82913	73	12	59	2	78
ASE_00030	RNaseP_bact_a links to Rfam database...	0.60	0.58	0.63	84	85357	50	5	45	0	61
ASE_00031	RNaseP_bact_a links to Rfam database...	0.60	0.58	0.61	73	86617	56	4	42	10	53
ASE_00032	RNaseP_bact_a links to Rfam database...	0.56	0.53	0.58	63	80092	50	3	42	5	55
ASE_00033	RNaseP_bact_a links to Rfam database...	0.58	0.52	0.65	63	64883	37	2	32	3	58
ASE_00035	RNaseP_bact_a links to Rfam database...	0.30	0.28	0.32	33	70398	76	12	57	7	85
ASE_00036	RNaseP_bact_a links to Rfam database...	0.43	0.41	0.45	54	75734	70	8	59	3	78
ASE_00037	RNaseP_bact_a links to Rfam database...	0.63	0.59	0.66	65	59242	37	0	33	4	45
ASE_00038	RNaseP_bact_a links to Rfam database...	0.54	0.53	0.54	54	53528	47	4	42	1	47
ASE_00040	RNaseP_bact_a links to Rfam database...	0.48	0.46	0.50	61	78882	66	5	55	6	72
ASE_00041	RNaseP_bact_a links to Rfam database...	0.44	0.41	0.47	44	57537	53	2	47	4	64
ASE_00042	RNaseP_bact_a links to Rfam database...	0.61	0.57	0.64	83	89971	49	2	44	3	62
ASE_00044	RNaseP_bact_a links to Rfam database...	0.69	0.68	0.70	71	54514	34	3	27	4	34
ASE_00046	RNaseP_bact_a links to Rfam database...	0.57	0.51	0.64	53	50320	30	5	25	0	50
ASE_00047	RNaseP_bact_a links to Rfam database...	0.33	0.32	0.35	41	74189	76	4	71	1	89
ASE_00052	RNaseP_bact_a links to Rfam database...	0.51	0.47	0.55	53	61329	48	2	41	5	59
ASE_00053	RNaseP_bact_a links to Rfam database...	0.56	0.54	0.57	72	79275	57	5	49	3	61
ASE_00057	RNaseP_bact_a links to Rfam database...	0.63	0.60	0.65	81	82090	49	8	36	5	53
ASE_00064	RNaseP_bact_a links to Rfam database...	0.32	0.31	0.32	28	45363	69	4	56	9	61
ASE_00066	RNaseP_bact_a links to Rfam database...	0.68	0.64	0.73	83	72277	31	4	26	1	47
ASE_00068	RNaseP_bact_a links to Rfam database...	0.52	0.49	0.55	42	37598	35	4	31	0	43
ASE_00069	RNaseP_bact_a links to Rfam database...	0.66	0.64	0.68	90	82896	45	5	37	3	50
ASE_00074	RNaseP_bact_a links to Rfam database...	0.58	0.57	0.60	68	67782	46	5	41	0	51
ASE_00075	RNaseP_bact_a links to Rfam database...	0.61	0.56	0.68	90	108678	47	3	40	4	72
ASE_00076	RNaseP_bact_a links to Rfam database...	0.55	0.52	0.59	61	68161	46	4	39	3	57
ASE_00077	RNaseP_bact_a links to Rfam database...	0.52	0.51	0.54	44	45068	38	7	31	0	42
ASE_00078	RNaseP_bact_a links to Rfam database...	0.65	0.63	0.68	52	42994	31	0	25	6	31
ASE_00079	RNaseP_bact_a links to Rfam database...	0.54	0.52	0.57	52	55519	40	4	36	0	48
ASE_00080	RNaseP_bact_a links to Rfam database...	0.47	0.45	0.49	55	71519	60	5	52	3	68
ASE_00081	RNaseP_bact_a links to Rfam database...	0.56	0.54	0.58	52	49680	39	2	36	1	45
ASE_00082	RNaseP_bact_a links to Rfam database...	0.55	0.51	0.59	59	70400	55	1	40	14	57
ASE_00083	RNaseP_bact_a links to Rfam database...	0.79	0.75	0.83	82	62382	24	2	15	7	28
ASE_00084	RNaseP_bact_a links to Rfam database...	0.69	0.69	0.70	68	53531	32	6	23	3	31
ASE_00087	RNaseP_bact_a links to Rfam database...	0.59	0.54	0.64	78	88288	49	5	39	5	66
ASE_00090	RNaseP_bact_a links to Rfam database...	0.59	0.59	0.59	60	55509	47	2	40	5	41
ASE_00092	RNaseP_bact_a links to Rfam database...	0.69	0.65	0.73	74	63444	33	5	23	5	39
ASE_00096	RNaseP_bact_a links to Rfam database...	0.56	0.54	0.59	62	63441	43	4	39	0	53
ASE_00099	RNaseP_bact_a links to Rfam database...	0.51	0.50	0.53	60	64506	56	6	48	2	60
ASE_00100	RNaseP_nuc links to Rfam database...	0.21	0.22	0.19	17	82126	113	16	56	41	59
ASE_00102	RNaseP_bact_a links to Rfam database...	0.43	0.41	0.45	68	117703	87	8	76	3	98
ASE_00104	RNaseP_bact_a links to Rfam database...	0.70	0.67	0.73	80	64151	31	5	25	1	39
ASE_00105	RNaseP_bact_a links to Rfam database...	0.36	0.34	0.38	38	64161	64	6	56	2	73
ASE_00107	RNaseP_bact_a links to Rfam database...	0.66	0.65	0.67	82	73031	40	5	35	0	45
ASE_00108	RNaseP_nuc links to Rfam database...	0.24	0.29	0.20	18	46883	81	21	49	11	45
ASE_00111	RNaseP_nuc links to Rfam database...	0.25	0.32	0.20	18	49997	80	31	40	9	39
ASE_00112	RNaseP_bact_a links to Rfam database...	0.78	0.74	0.83	86	75362	24	5	13	6	30
ASE_00115	RNaseP_bact_a links to Rfam database...	0.49	0.48	0.51	48	54521	53	1	45	7	53
ASE_00116	RNaseP_arch links to Rfam database...	0.20	0.20	0.20	13	31561	55	2	50	3	53
ASE_00118	RNaseP_bact_a links to Rfam database...	0.58	0.56	0.59	57	60630	42	3	36	3	45
ASE_00119	RNaseP_bact_a links to Rfam database...	0.67	0.65	0.69	70	62734	33	1	30	2	38
ASE_00120	RNaseP_arch links to Rfam database...	0.51	0.49	0.53	46	46885	42	8	32	2	48
ASE_00121	RNaseP_arch links to Rfam database...	0.24	0.24	0.24	22	45060	68	5	63	0	70
ASE_00122	RNaseP_bact_a links to Rfam database...	0.47	0.45	0.48	40	43282	43	2	41	0	48
ASE_00123	RNaseP_bact_a links to Rfam database...	0.28	0.27	0.29	23	38425	59	3	52	4	62
ASE_00125	RNaseP_bact_a links to Rfam database...	0.64	0.63	0.65	55	39255	30	4	26	0	33
ASE_00128	RNaseP_bact_a links to Rfam database...	0.65	0.62	0.69	62	53211	36	3	25	8	38
ASE_00129	RNaseP_bact_a links to Rfam database...	0.52	0.50	0.53	56	62730	53	5	44	4	55
ASE_00131	RNaseP_bact_a links to Rfam database...	0.61	0.55	0.68	47	39271	32	0	22	10	38
ASE_00132	RNaseP_bact_a links to Rfam database...	0.66	0.63	0.68	60	50315	30	4	24	2	35
ASE_00134	RNaseP_bact_a links to Rfam database...	0.41	0.42	0.40	40	50302	64	10	51	3	55
ASE_00135	RNaseP_bact_a links to Rfam database...	0.46	0.45	0.47	49	63085	59	8	48	3	60
ASE_00136	RNaseP_bact_a links to Rfam database...	0.56	0.52	0.60	48	48125	41	1	31	9	44
ASE_00137	RNaseP_bact_a links to Rfam database...	0.67	0.65	0.68	64	48422	32	4	26	2	34
ASE_00138	RNaseP_bact_a links to Rfam database...	0.53	0.52	0.55	42	40393	35	4	31	0	39
ASE_00139	RNaseP_bact_a links to Rfam database...	0.35	0.33	0.38	34	54196	58	4	51	3	70
ASE_00140	RNaseP_bact_a links to Rfam database...	0.72	0.67	0.77	84	70767	27	4	21	2	41
ASE_00142	RNaseP_bact_a links to Rfam database...	0.74	0.70	0.79	85	67054	26	4	18	4	37
ASE_00145	RNaseP_arch links to Rfam database...	0.46	0.45	0.48	50	70021	59	7	47	5	61
ASE_00146	RNaseP_bact_a links to Rfam database...	0.55	0.52	0.60	64	70769	49	2	41	6	60
ASE_00148	RNaseP_arch links to Rfam database...	0.69	0.67	0.72	103	112431	44	4	37	3	51
ASE_00151	RNaseP_bact_a links to Rfam database...	0.29	0.28	0.31	27	51915	61	7	54	0	71
ASE_00153	RNaseP_nuc links to Rfam database...	0.67	0.68	0.66	50	57554	68	2	24	42	23
ASE_00154	RNaseP_arch links to Rfam database...	0.64	0.63	0.65	67	65238	39	4	32	3	40
ASE_00155	RNaseP_arch links to Rfam database...	0.62	0.61	0.63	86	93392	57	8	42	7	56
ASE_00163	RNaseP_bact_a links to Rfam database...	0.60	0.59	0.62	55	53212	45	2	32	11	38
ASE_00165	RNaseP_bact_a links to Rfam database...	0.54	0.52	0.56	53	52881	42	5	36	1	48
ASE_00168	RNaseP_nuc links to Rfam database...	0.31	0.38	0.25	24	60631	84	28	43	13	40
ASE_00169	RNaseP_bact_a links to Rfam database...	0.51	0.49	0.54	52	57194	49	7	38	4	55
ASE_00170	RNaseP_bact_a links to Rfam database...	0.70	0.68	0.72	63	48740	26	2	23	1	30
ASE_00171	RNaseP_bact_a links to Rfam database...	0.70	0.69	0.71	65	48425	26	5	21	0	29
ASE_00172	RNaseP_bact_a links to Rfam database...	0.69	0.68	0.70	72	58893	36	6	25	5	34
ASE_00174	RNaseP_bact_a links to Rfam database...	0.52	0.51	0.53	56	60970	50	6	43	1	53
ASE_00175	RNaseP_bact_a links to Rfam database...	0.73	0.70	0.76	75	59932	31	2	22	7	32
ASE_00176	RNaseP_bact_a links to Rfam database...	0.61	0.58	0.64	64	59931	39	6	30	3	46
ASE_00179	RNaseP_bact_a links to Rfam database...	0.65	0.65	0.64	55	44167	31	6	25	0	29
ASE_00180	RNaseP_bact_a links to Rfam database...	0.65	0.62	0.69	62	51270	33	2	26	5	38
ASE_00181	RNaseP_bact_a links to Rfam database...	0.54	0.53	0.55	56	57528	50	3	43	4	50
ASE_00182	RNaseP_bact_a links to Rfam database...	0.53	0.51	0.55	69	84130	59	6	50	3	67
ASE_00183	RNaseP_bact_a links to Rfam database...	0.72	0.71	0.73	80	61316	33	2	27	4	33
ASE_00184	RNaseP_bact_a links to Rfam database...	0.66	0.66	0.66	67	54513	35	9	26	0	35
ASE_00185	RNaseP_bact_a links to Rfam database...	0.74	0.71	0.77	91	73418	33	5	22	6	37
ASE_00186	RNaseP_bact_a links to Rfam database...	0.74	0.70	0.79	92	78886	30	3	22	5	40
ASE_00187	RNaseP_arch links to Rfam database...	0.47	0.44	0.49	51	68531	58	6	47	5	64
ASE_00189	RNaseP_bact_b links to Rfam database...	0.52	0.49	0.54	50	63098	47	8	34	5	52
ASE_00190	RNaseP_bact_b links to Rfam database...	0.57	0.54	0.60	49	45369	35	6	27	2	41
ASE_00192	RNaseP_bact_b links to Rfam database...	0.41	0.40	0.42	53	84541	78	9	63	6	80
ASE_00194	RNaseP_bact_b links to Rfam database...	0.54	0.53	0.56	63	73423	54	11	39	4	56
ASE_00196	RNaseP_arch links to Rfam database...	0.73	0.72	0.75	54	31554	21	2	16	3	21
ASE_00197	RNaseP_bact_a links to Rfam database...	0.54	0.50	0.58	73	89127	58	2	51	5	72
ASE_00198	RNaseP_bact_a links to Rfam database...	0.53	0.53	0.53	54	52549	47	7	40	0	48
ASE_00203	RNaseP_bact_a links to Rfam database...	0.62	0.61	0.63	59	46572	34	6	28	0	37
ASE_00204	RNaseP_bact_b links to Rfam database...	0.65	0.61	0.69	68	67798	35	7	23	5	44
ASE_00205	RNaseP_arch links to Rfam database...	0.43	0.43	0.43	39	45966	54	7	44	3	51
ASE_00209	RNaseP_arch links to Rfam database...	0.39	0.38	0.42	33	42992	46	5	41	0	55
ASE_00210	RNaseP_arch links to Rfam database...	0.59	0.60	0.59	39	27195	28	6	21	1	26
ASE_00212	RNaseP_bact_a links to Rfam database...	0.51	0.49	0.54	72	93827	66	5	57	4	76
ASE_00213	RNaseP_arch links to Rfam database...	0.74	0.73	0.76	48	27198	16	3	12	1	18
ASE_00214	RNaseP_bact_a links to Rfam database...	0.79	0.77	0.81	79	56182	27	3	16	8	24
ASE_00215	RNaseP_bact_a links to Rfam database...	0.58	0.55	0.62	54	48429	35	7	26	2	45
ASE_00216	RNaseP_bact_a links to Rfam database...	0.66	0.66	0.67	54	39259	28	9	18	1	28
ASE_00217	RNaseP_bact_a links to Rfam database...	0.30	0.29	0.33	26	40390	58	6	48	4	64
ASE_00221	RNaseP_bact_a links to Rfam database...	0.57	0.52	0.64	61	64524	38	3	32	3	56
ASE_00222	RNaseP_arch links to Rfam database...	0.59	0.59	0.61	92	111949	61	10	50	1	65
ASE_00227	RNaseP_bact_a links to Rfam database...	0.30	0.29	0.32	38	78885	80	5	75	0	95
ASE_00228	RNaseP_bact_a links to Rfam database...	0.53	0.55	0.52	47	46880	44	14	30	0	39
ASE_00229	RNaseP_bact_a links to Rfam database...	0.60	0.60	0.61	52	42401	33	10	23	0	35
ASE_00231	RNaseP_bact_a links to Rfam database...	0.31	0.31	0.31	30	47798	67	8	59	0	66
ASE_00232	RNaseP_bact_a links to Rfam database...	0.59	0.58	0.60	49	38422	34	3	29	2	35
ASE_00234	RNaseP_bact_a links to Rfam database...	0.51	0.47	0.54	61	75354	55	4	47	4	68
ASE_00237	RNaseP_nuc links to Rfam database...	0.00	0.00	0.00	0	45667	96	29	57	10	56
ASE_00238	RNaseP_bact_a links to Rfam database...	0.52	0.50	0.53	57	64154	55	1	49	5	57
ASE_00240	RNaseP_bact_a links to Rfam database...	0.61	0.59	0.63	55	46578	40	2	30	8	38
ASE_00241	RNaseP_bact_a links to Rfam database...	0.55	0.53	0.58	46	43876	41	5	29	7	41
ASE_00242	RNaseP_bact_a links to Rfam database...	0.72	0.68	0.76	76	60975	27	3	21	3	36
ASE_00246	RNaseP_nuc links to Rfam database...	0.16	0.18	0.15	12	48123	79	19	51	9	55
ASE_00247	RNaseP_nuc links to Rfam database...	0.17	0.19	0.15	12	54207	97	18	48	31	52
ASE_00248	RNaseP_bact_a links to Rfam database...	0.41	0.38	0.44	43	62383	55	3	52	0	71
ASE_00250	RNaseP_bact_a links to Rfam database...	0.48	0.46	0.50	60	78884	62	5	54	3	71
ASE_00252	RNaseP_bact_a links to Rfam database...	0.56	0.54	0.58	91	115284	69	5	60	4	77
ASE_00254	RNaseP_bact_a links to Rfam database...	0.74	0.72	0.76	59	36778	24	6	13	5	23
ASE_00255	RNaseP_bact_a links to Rfam database...	0.48	0.45	0.50	59	74573	59	7	52	0	71
ASE_00257	RNaseP_bact_a links to Rfam database...	0.56	0.56	0.57	54	50946	40	9	31	0	43
ASE_00259	RNaseP_bact_a links to Rfam database...	0.49	0.45	0.52	55	73048	53	4	46	3	66
ASE_00263	RNaseP_bact_a links to Rfam database...	0.62	0.62	0.62	74	70380	47	5	41	1	46
ASE_00264	RNaseP_nuc links to Rfam database...	0.89	0.83	0.97	83	49055	16	0	3	13	17
ASE_00267	RNaseP_bact_a links to Rfam database...	0.49	0.45	0.53	40	45074	45	4	32	9	48
ASE_00270	RNaseP_bact_a links to Rfam database...	0.68	0.66	0.69	85	72267	40	7	31	2	43
ASE_00274	RNaseP_bact_a links to Rfam database...	0.50	0.49	0.51	50	55513	48	9	39	0	53
ASE_00277	RNaseP_bact_a links to Rfam database...	0.39	0.38	0.39	35	48115	57	9	46	2	56
ASE_00279	RNaseP_bact_a links to Rfam database...	0.70	0.66	0.74	67	53210	28	0	24	4	34
ASE_00280	RNaseP_bact_a links to Rfam database...	0.62	0.60	0.64	59	51911	38	4	29	5	39
ASE_00281	RNaseP_bact_a links to Rfam database...	0.54	0.51	0.58	45	44473	39	0	33	6	43
ASE_00282	RNaseP_bact_a links to Rfam database...	0.55	0.54	0.56	69	77692	54	6	48	0	58
ASE_00283	RNaseP_bact_a links to Rfam database...	0.82	0.79	0.86	84	61678	22	2	12	8	23
ASE_00284	RNaseP_bact_a links to Rfam database...	0.63	0.61	0.65	66	58209	41	5	31	5	42
ASE_00285	RNaseP_bact_a links to Rfam database...	0.69	0.65	0.73	79	68898	36	2	27	7	43
ASE_00286	RNaseP_bact_a links to Rfam database...	0.43	0.42	0.43	39	46574	61	3	49	9	53
ASE_00287	RNaseP_bact_a links to Rfam database...	0.70	0.66	0.75	68	54855	30	2	21	7	35
ASE_00288	RNaseP_bact_a links to Rfam database...	0.45	0.43	0.47	40	45970	47	3	43	1	53
ASE_00289	RNaseP_bact_a links to Rfam database...	0.66	0.62	0.70	97	100887	44	3	38	3	60
ASE_00292	RNaseP_bact_a links to Rfam database...	0.64	0.59	0.70	82	81693	38	3	32	3	56
ASE_00294	RNaseP_bact_a links to Rfam database...	0.78	0.74	0.83	127	114328	29	3	23	3	44
ASE_00295	RNaseP_bact_a links to Rfam database...	0.63	0.59	0.67	77	73805	41	6	32	3	54
ASE_00296	RNaseP_bact_a links to Rfam database...	0.29	0.28	0.31	40	91676	90	9	81	0	105
ASE_00297	RNaseP_bact_a links to Rfam database...	0.68	0.67	0.69	66	52879	30	4	26	0	32
ASE_00298	RNaseP_bact_a links to Rfam database...	0.46	0.44	0.48	50	67423	59	6	49	4	63
ASE_00299	RNaseP_bact_a links to Rfam database...	0.50	0.48	0.52	48	49362	52	5	40	7	52
ASE_00313	RNaseP_nuc links to Rfam database...	0.72	0.71	0.72	63	62394	46	6	18	22	26
ASE_00316	RNaseP_nuc links to Rfam database...	0.59	0.57	0.61	56	107788	84	7	29	48	42
ASE_00318	RNaseP_bact_b links to Rfam database...	0.65	0.64	0.67	75	80088	41	13	24	4	43
ASE_00327	RNaseP_nuc links to Rfam database...	0.81	0.76	0.85	68	57211	32	4	8	20	21
ASE_00328	RNaseP_bact_b links to Rfam database...	0.40	0.40	0.41	45	72660	73	3	63	7	67
ASE_00330	RNaseP_nuc links to Rfam database...	0.70	0.70	0.71	63	56191	46	4	22	20	27
ASE_00332	RNaseP_bact_a links to Rfam database...	0.54	0.51	0.56	71	81683	57	2	54	1	67
ASE_00335	RNaseP_bact_b links to Rfam database...	0.48	0.47	0.50	54	75358	61	5	49	7	62
ASE_00337	RNaseP_nuc links to Rfam database...	0.58	0.58	0.59	41	39270	43	5	24	14	30
ASE_00338	RNaseP_nuc links to Rfam database...	0.60	0.54	0.66	53	66350	49	5	22	22	45
ASE_00339	RNaseP_bact_a links to Rfam database...	0.53	0.52	0.53	62	80084	67	5	49	13	57
ASE_00340	RNaseP_bact_a links to Rfam database...	0.75	0.74	0.76	63	45973	29	6	14	9	22
ASE_00342	RNaseP_bact_a links to Rfam database...	0.56	0.51	0.60	59	62383	39	2	37	0	56
ASE_00343	RNaseP_bact_a links to Rfam database...	0.63	0.63	0.63	71	83323	55	8	34	13	42
ASE_00346	RNaseP_arch links to Rfam database...	0.30	0.29	0.31	28	48115	64	7	55	2	69
ASE_00353	RNaseP_bact_a links to Rfam database...	0.49	0.50	0.48	53	57859	58	11	47	0	54
ASE_00359	RNaseP_arch links to Rfam database...	0.49	0.49	0.49	39	42698	46	3	38	5	41
ASE_00360	RNaseP_arch links to Rfam database...	0.22	0.23	0.22	15	29335	57	10	43	4	50
ASE_00361	RNaseP_bact_a links to Rfam database...	0.49	0.46	0.51	59	75351	59	7	49	3	68
ASE_00362	RNaseP_bact_a links to Rfam database...	0.62	0.62	0.63	56	48116	36	6	27	3	35
ASE_00363	RNaseP_bact_a links to Rfam database...	0.55	0.55	0.54	52	51264	47	4	40	3	42
ASE_00364	RNaseP_bact_a links to Rfam database...	0.31	0.30	0.32	32	54184	72	7	62	3	73
ASE_00366	RNaseP_bact_a links to Rfam database...	0.56	0.58	0.54	57	58547	50	10	39	1	41
ASE_00367	RNaseP_bact_a links to Rfam database...	0.55	0.56	0.55	48	42983	43	6	34	3	38
ASE_00369	RNaseP_bact_a links to Rfam database...	0.65	0.63	0.67	67	55845	37	3	30	4	40
ASE_00370	RNaseP_bact_a links to Rfam database...	0.67	0.65	0.69	55	41825	25	7	18	0	29
ASE_00372	RNaseP_bact_a links to Rfam database...	0.70	0.69	0.71	69	51906	31	5	23	3	31
ASE_00374	RNaseP_bact_a links to Rfam database...	0.56	0.56	0.57	49	44764	37	8	29	0	39
ASE_00375	RNaseP_bact_a links to Rfam database...	0.72	0.68	0.77	75	60280	28	1	22	5	35
ASE_00376	RNaseP_bact_a links to Rfam database...	0.52	0.50	0.55	53	56856	47	4	40	3	52
ASE_00377	RNaseP_bact_a links to Rfam database...	0.68	0.66	0.70	71	57529	36	4	26	6	36
ASE_00379	RNaseP_bact_a links to Rfam database...	0.70	0.69	0.71	61	45970	34	3	22	9	28
ASE_00380	RNaseP_bact_a links to Rfam database...	0.47	0.44	0.49	44	54857	50	1	44	5	55
ASE_00382	RNaseP_bact_a links to Rfam database...	0.53	0.52	0.54	44	41824	40	6	31	3	40
ASE_00383	RNaseP_bact_a links to Rfam database...	0.53	0.50	0.55	53	54519	47	4	39	4	52
ASE_00384	RNaseP_bact_a links to Rfam database...	0.60	0.59	0.61	54	48428	39	2	32	5	38
ASE_00385	RNaseP_bact_a links to Rfam database...	0.55	0.52	0.58	42	41832	35	4	27	4	39
ASE_00386	RNaseP_bact_a links to Rfam database...	0.62	0.61	0.63	59	50309	42	2	33	7	37
ASE_00387	RNaseP_bact_a links to Rfam database...	0.44	0.44	0.44	46	55841	58	6	52	0	58
ASE_00388	RNaseP_bact_a links to Rfam database...	0.73	0.73	0.74	65	45665	28	3	20	5	24
ASE_00390	RNaseP_bact_a links to Rfam database...	0.49	0.47	0.51	40	42117	45	6	32	7	45
ASE_00393	RNaseP_bact_a links to Rfam database...	0.36	0.34	0.38	32	47810	59	3	50	6	61
ASE_00394	RNaseP_bact_a links to Rfam database...	0.75	0.75	0.75	70	46878	26	5	18	3	23
ASE_00395	RNaseP_bact_a links to Rfam database...	0.55	0.58	0.52	49	41521	46	8	38	0	35
ASE_00396	RNaseP_bact_a links to Rfam database...	0.57	0.58	0.56	48	41530	43	8	30	5	35
ASE_00397	RNaseP_bact_a links to Rfam database...	0.57	0.57	0.58	60	54511	46	3	41	2	45
ASE_00398	RNaseP_bact_a links to Rfam database...	0.66	0.64	0.68	67	55846	35	3	29	3	37
ASE_00400	RNaseP_bact_a links to Rfam database...	0.56	0.55	0.57	58	57869	44	4	39	1	48
ASE_00401	RNaseP_bact_a links to Rfam database...	0.56	0.56	0.56	70	76904	54	11	43	0	56
ASE_00402	RNaseP_bact_a links to Rfam database...	0.62	0.61	0.63	52	42403	34	6	25	3	33
ASE_00403	RNaseP_bact_a links to Rfam database...	0.46	0.44	0.47	47	55846	53	3	49	1	60
ASE_00404	RNaseP_bact_a links to Rfam database...	0.55	0.54	0.57	46	42990	42	0	35	7	39
ASE_00406	RNaseP_bact_a links to Rfam database...	0.70	0.67	0.73	63	48742	27	8	15	4	31
ASE_00411	RNaseP_bact_a links to Rfam database...	0.35	0.36	0.34	32	49362	61	11	50	0	57
ASE_00412	RNaseP_bact_a links to Rfam database...	0.45	0.44	0.47	46	58213	54	8	44	2	59
ASE_00413	RNaseP_bact_a links to Rfam database...	0.53	0.56	0.51	45	44462	44	14	30	0	36
ASE_00414	RNaseP_bact_a links to Rfam database...	0.37	0.35	0.40	33	46278	56	2	47	7	62
ASE_00415	RNaseP_bact_a links to Rfam database...	0.43	0.44	0.42	45	54840	63	9	52	2	58
ASE_00416	RNaseP_bact_a links to Rfam database...	0.70	0.67	0.73	85	77305	38	2	29	7	42
ASE_00417	RNaseP_arch links to Rfam database...	0.36	0.37	0.35	37	54509	72	10	59	3	63
ASE_00418	RNaseP_arch links to Rfam database...	0.21	0.21	0.20	16	38702	65	12	51	2	59
ASE_00419	RNaseP_bact_a links to Rfam database...	0.77	0.74	0.81	76	54852	22	4	14	4	27
ASE_00422	RNaseP_bact_a links to Rfam database...	0.70	0.68	0.73	64	46883	31	5	19	7	30
ASE_00423	RNaseP_bact_a links to Rfam database...	0.50	0.49	0.52	53	56852	51	7	41	3	56
ASE_00426	RNaseP_bact_a links to Rfam database...	0.40	0.40	0.41	43	60969	63	9	54	0	65
ASE_00428	RNaseP_bact_a links to Rfam database...	0.53	0.51	0.56	64	76521	55	5	46	4	61
ASE_00430	RNaseP_bact_a links to Rfam database...	0.64	0.62	0.66	60	46880	38	5	26	7	37
ASE_00431	RNaseP_bact_a links to Rfam database...	0.52	0.49	0.55	47	46274	44	4	35	5	48
ASE_00434	RNaseP_bact_b links to Rfam database...	0.63	0.59	0.66	65	68167	46	8	25	13	45
ASE_00437	RNaseP_bact_a links to Rfam database...	0.42	0.40	0.44	54	79278	69	5	64	0	81
ASE_00438	RNaseP_bact_a links to Rfam database...	0.48	0.44	0.52	51	65967	48	2	46	0	65
ASE_00441	RNaseP_bact_a links to Rfam database...	0.77	0.72	0.82	81	64162	30	2	16	12	31
ASE_00447	RNaseP_bact_a links to Rfam database...	0.50	0.47	0.52	55	60273	53	1	49	3	61
ASE_00448	RNaseP_bact_a links to Rfam database...	0.22	0.22	0.23	25	64150	92	6	80	6	87
ASE_00451	RNaseP_bact_a links to Rfam database...	0.63	0.59	0.68	74	70767	38	2	33	3	51
CRW_00013	Intron_gpI links to Rfam database...	0.24	0.24	0.24	28	103624	107	18	70	19	87
CRW_00016	Intron_gpI links to Rfam database...	0.62	0.57	0.67	68	77320	45	5	28	12	52
CRW_00610	Intron_gpI links to Rfam database...	0.45	0.44	0.46	36	36236	43	6	37	0	45
CRW_00613	Intron_gpI links to Rfam database...	0.63	0.58	0.68	45	34914	29	1	20	8	33
CRW_00614	Intron_gpI links to Rfam database...	0.09	0.11	0.08	6	121694	140	20	51	69	51
CRW_00618	Intron_gpI links to Rfam database...	0.18	0.20	0.17	12	56210	83	10	48	25	49
CRW_00619	Intron_gpI links to Rfam database...	0.37	0.42	0.33	31	164931	138	28	35	75	42
CRW_00620	Intron_gpI links to Rfam database...	0.16	0.21	0.12	13	150870	160	31	61	68	50
CRW_00621	Intron_gpI links to Rfam database...	0.25	0.25	0.26	18	153111	144	9	43	92	53
CRW_00623	Intron_gpI links to Rfam database...	0.31	0.29	0.32	24	129721	119	11	39	69	59
CRW_00633	Intron_gpI links to Rfam database...	0.69	0.67	0.71	71	63446	33	8	21	4	35
CRW_00634	Intron_gpI links to Rfam database...	0.33	0.34	0.33	32	64522	70	14	52	4	62
CRW_00670	Intron_gpI links to Rfam database...	0.79	0.74	0.83	89	70018	21	6	12	3	31
CRW_00671	Intron_gpI links to Rfam database...	0.65	0.62	0.68	72	62729	39	7	27	5	45
CRW_00672	Intron_gpI links to Rfam database...	0.48	0.49	0.47	54	72275	65	19	42	4	57
CRW_00674	Intron_gpI links to Rfam database...	0.58	0.56	0.62	69	83324	45	7	36	2	55
CRW_00676	Intron_gpI links to Rfam database...	0.54	0.55	0.53	63	93410	69	15	40	14	52
CRW_00692	Intron_gpI links to Rfam database...	0.20	0.21	0.19	19	68537	84	24	55	5	71
PDB_00827	Intron_gpI links to Rfam database...	0.58	0.52	0.66	42	26964	23	1	21	1	39
PDB_00919	RNaseP_bact_a links to Rfam database...	0.50	0.47	0.55	48	44165	43	3	37	3	55
RFA_00597	Telomerase-vert links to Rfam database...	0.50	0.50	0.50	55	97792	79	9	47	23	54
RFA_00598	Telomerase-vert links to Rfam database...	0.68	0.64	0.71	65	84575	52	6	20	26	36
RFA_00599	Telomerase-vert links to Rfam database...	0.67	0.70	0.63	78	101352	64	17	28	19	33
RFA_00600	Telomerase-vert links to Rfam database...	0.62	0.69	0.56	69	120172	85	29	25	31	31
RFA_00601	Telomerase-vert links to Rfam database...	0.47	0.49	0.44	56	99109	89	21	49	19	58
RFA_00602	Telomerase-vert links to Rfam database...	0.51	0.53	0.48	62	101347	86	18	48	20	54
TMR_00173	tmRNA links to Rfam database...	0.32	0.36	0.28	15	42142	64	16	22	26	27
TMR_00357	tmRNA links to Rfam database...	0.40	0.41	0.40	38	82932	75	20	38	17	54
TMR_00601	tmRNA links to Rfam database...	0.46	0.48	0.45	20	58952	81	2	22	57	22
TMR_00603	tmRNA links to Rfam database...	0.55	0.56	0.55	24	60334	76	7	13	56	19
TMR_00611	tmRNA links to Rfam database...	0.43	0.45	0.41	46	61314	65	16	49	0	56
TMR_00696	tmRNA links to Rfam database...	0.33	0.33	0.33	38	84962	95	12	66	17	76

^top

Matthews Correlation Coeffient, Sensitivity and Positive Predictive Value have been calculated based on the paper by Gardener & Giegerich, 2004.

Table of contents:

Overview

Performance plots

Performance of MXScarna(seed) - scored higher in this pairwise comparison

1. Total counts & total scores for MXScarna(seed)

2. Individual counts for MXScarna(seed) [ download as .csv ]

Performance of UNAFold - scored lower in this pairwise comparison

1. Total counts & total scores for UNAFold

2. Individual counts for UNAFold [ download as .csv ]