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Table of contents:

  1. Overview

  2. Performance Plots

  3. Performance of Multilign(20) - scored higher in this pairwise comparison

  4. Performance of Vsfold5 - scored lower in this pairwise comparison

  5. Compile and download dataset for Multilign(20) & Vsfold5 [.zip] - may take several seconds...


Overview

Metric Multilign(20) Vsfold5
MCC 0.649 > 0.370
Average MCC ± 95% Confidence Intervals 0.651 ± 0.017 > 0.364 ± 0.021
Sensitivity 0.590 > 0.343
Positive Predictive Value 0.715 > 0.402
Total TP 11179 > 6497
Total TN 10769649 > 10769130
Total FP 5213 < 10187
Total FP CONTRA 579 < 1043
Total FP INCONS 3870 < 8607
Total FP COMP 764 > 537
Total FN 7762 < 12444
P-value 3.56938820447e-08

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Performance plots


  1. Comparison of performance of Multilign(20) and Vsfold5. Positive Predictive Value (PPV) is plotted against sensitivity. Each dot represents a single test of each method. See tables below for raw data (individual counts for Multilign(20) and Vsfold5).

  2. Average Matthews Correlation Coefficients (MCC) with 95% confidence intervals (CIs) were plotted for different RNA families, for which at least 3 members were present in the benchmarking dataset. 'n' denotes the number of MCCs used to calculate the average and CI. See tables below for raw data (individual counts for Multilign(20) and Vsfold5).

  3. Comparison of average Matthews Correlation Coefficients (MCCs) for Multilign(20) and Vsfold5. The whiskers correspond to 95% confidence intervals (CIs). 'n' denotes the number of MCCs used to calculate average MCCs and CIs. See tables below for raw data (individual counts for Multilign(20) and Vsfold5).

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Performance of Multilign(20) - scored higher in this pairwise comparison

1. Total counts & total scores for Multilign(20)

Total Base Pair Counts
Total TP 11179
Total TN 10769649
Total FP 5213
Total FP CONTRA 579
Total FP INCONS 3870
Total FP COMP 764
Total FN 7762
Total Scores
MCC 0.649
Average MCC ± 95% Confidence Intervals 0.651 ± 0.017
Sensitivity 0.590
Positive Predictive Value 0.715
Nr of predictions 184

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2. Individual counts for Multilign(20) [ download as .csv ]

RNA Chain Rfam family MCC SENS PPV TP TN FP FP CONTRA FP INCONS FP COMP FN
ASE_00005 0.73 0.66 0.82 77 57876 23 0 17 6 40
ASE_00006 0.78 0.76 0.81 71 47498 22 1 16 5 22
ASE_00007 0.70 0.63 0.78 69 59596 25 0 20 5 41
ASE_00012 0.62 0.56 0.69 69 73820 36 3 28 5 54
ASE_00018 0.75 0.67 0.84 90 80494 19 1 16 2 44
ASE_00020 0.49 0.43 0.56 54 73823 43 4 39 0 72
ASE_00035 0.62 0.57 0.68 67 70402 35 3 28 4 51
ASE_00037 0.56 0.49 0.64 54 59255 31 4 27 0 56
ASE_00038 0.57 0.53 0.61 54 53540 37 3 31 3 47
ASE_00040 0.69 0.62 0.75 83 78893 28 0 27 1 50
ASE_00041 0.72 0.67 0.78 72 57538 21 1 19 1 36
ASE_00044 0.83 0.77 0.89 81 54524 12 0 10 2 24
ASE_00064 0.76 0.67 0.86 60 45381 21 0 10 11 29
ASE_00068 0.76 0.71 0.82 60 37602 17 0 13 4 25
ASE_00074 0.82 0.78 0.87 93 67789 14 1 13 0 26
ASE_00077 0.61 0.55 0.67 47 45080 33 5 18 10 39
ASE_00078 0.81 0.77 0.84 64 42995 18 0 12 6 19
ASE_00080 0.52 0.48 0.57 59 71528 44 5 39 0 64
ASE_00081 0.80 0.75 0.86 73 49685 13 0 12 1 24
ASE_00082 0.58 0.53 0.63 62 70402 47 3 33 11 54
ASE_00083 0.82 0.74 0.91 81 62392 10 0 8 2 29
ASE_00084 0.60 0.55 0.67 54 53547 27 1 26 0 45
ASE_00087 0.47 0.40 0.57 57 88310 43 2 41 0 87
ASE_00090 0.52 0.46 0.60 46 55534 36 5 26 5 55
ASE_00092 0.69 0.63 0.76 71 63452 24 0 23 1 42
ASE_00099 0.81 0.76 0.86 91 64514 16 2 13 1 29
ASE_00104 0.82 0.76 0.89 90 64160 16 1 10 5 29
ASE_00105 0.53 0.49 0.58 54 64168 41 6 33 2 57
ASE_00107 0.64 0.57 0.73 72 73055 28 1 25 2 55
ASE_00115 0.72 0.61 0.84 62 54541 12 1 11 0 39
ASE_00118 0.55 0.49 0.62 50 60645 33 1 30 2 52
ASE_00119 0.55 0.50 0.61 54 62747 36 1 33 2 54
ASE_00123 0.55 0.51 0.60 43 38431 33 1 28 4 42
ASE_00126 0.70 0.70 0.71 57 40390 30 3 20 7 25
ASE_00128 0.74 0.62 0.87 62 53230 13 1 8 4 38
ASE_00129 0.69 0.63 0.75 70 62742 23 2 21 0 41
ASE_00131 0.48 0.42 0.54 36 39273 36 2 29 5 49
ASE_00134 0.71 0.67 0.74 64 50317 23 3 19 1 31
ASE_00135 0.54 0.49 0.60 53 63102 40 6 29 5 56
ASE_00136 0.83 0.78 0.89 72 48124 16 0 9 7 20
ASE_00137 0.52 0.48 0.56 47 48432 42 0 37 5 51
ASE_00138 0.79 0.73 0.87 59 40402 12 3 6 3 22
ASE_00140 0.46 0.38 0.55 48 70789 40 3 36 1 77
ASE_00142 0.72 0.67 0.78 82 67056 25 3 20 2 40
ASE_00146 0.64 0.54 0.76 67 70788 22 1 20 1 57
ASE_00153 0.38 0.37 0.39 27 57560 76 9 34 33 46
ASE_00163 0.69 0.67 0.71 62 53214 27 7 18 2 31
ASE_00165 0.54 0.49 0.60 49 52893 35 6 27 2 52
ASE_00170 0.83 0.77 0.90 72 48748 10 2 6 2 21
ASE_00171 0.88 0.80 0.96 75 48438 8 0 3 5 19
ASE_00172 0.66 0.58 0.76 61 58916 25 3 16 6 45
ASE_00174 0.53 0.45 0.63 49 60997 32 1 28 3 60
ASE_00175 0.63 0.55 0.73 59 59950 27 2 20 5 48
ASE_00179 0.76 0.69 0.84 58 44184 15 1 10 4 26
ASE_00180 0.77 0.70 0.85 70 51278 15 3 9 3 30
ASE_00181 0.67 0.63 0.71 67 57536 30 0 27 3 39
ASE_00182 0.48 0.40 0.57 55 84158 42 2 40 0 81
ASE_00183 0.70 0.63 0.77 71 61333 23 0 21 2 42
ASE_00184 0.76 0.68 0.85 69 54534 20 0 12 8 33
ASE_00185 0.42 0.38 0.47 48 73434 58 2 52 4 80
ASE_00190 0.46 0.37 0.57 33 45393 28 4 21 3 57
ASE_00197 0.42 0.36 0.50 52 89150 54 1 50 3 93
ASE_00198 0.63 0.58 0.69 59 52564 30 3 24 3 43
ASE_00203 0.56 0.52 0.61 50 46583 36 0 32 4 46
ASE_00214 0.83 0.79 0.87 81 56187 17 3 9 5 22
ASE_00215 0.18 0.15 0.23 15 48450 55 4 47 4 84
ASE_00216 0.71 0.67 0.74 55 39266 26 2 17 7 27
ASE_00217 0.50 0.46 0.55 41 40395 39 1 33 5 49
ASE_00221 0.65 0.56 0.74 66 64531 24 0 23 1 51
ASE_00228 0.69 0.67 0.72 58 46890 26 4 19 3 28
ASE_00229 0.60 0.57 0.63 50 42406 32 4 26 2 37
ASE_00231 0.44 0.40 0.50 38 47819 42 3 35 4 58
ASE_00232 0.81 0.81 0.81 68 38419 17 6 10 1 16
ASE_00234 0.68 0.60 0.76 78 75363 27 6 19 2 51
ASE_00238 0.50 0.45 0.55 51 64169 42 6 35 1 63
ASE_00241 0.78 0.71 0.86 62 43884 15 1 9 5 25
ASE_00242 0.72 0.66 0.80 74 60982 24 1 18 5 38
ASE_00254 0.48 0.46 0.50 38 36780 39 5 33 1 44
ASE_00257 0.70 0.64 0.78 62 50960 25 1 17 7 35
ASE_00263 0.46 0.41 0.52 49 70405 47 6 40 1 71
ASE_00267 0.75 0.68 0.82 60 45077 21 1 12 8 28
ASE_00270 0.56 0.49 0.64 63 72292 38 2 33 3 65
ASE_00274 0.59 0.51 0.67 53 55532 28 5 21 2 50
ASE_00277 0.79 0.75 0.83 68 48123 16 0 14 2 23
ASE_00279 0.78 0.73 0.82 74 53211 20 2 14 4 27
ASE_00280 0.72 0.66 0.78 65 51920 21 1 17 3 33
ASE_00281 0.80 0.73 0.89 64 44479 15 1 7 7 24
ASE_00282 0.48 0.42 0.56 53 77721 42 3 38 1 74
ASE_00283 0.73 0.67 0.80 72 61686 23 0 18 5 35
ASE_00284 0.65 0.59 0.71 64 58221 29 3 23 3 44
ASE_00285 0.58 0.51 0.67 62 68914 32 3 27 2 60
ASE_00286 0.82 0.74 0.91 68 46590 10 1 6 3 24
ASE_00287 0.62 0.56 0.68 58 54861 28 0 27 1 45
ASE_00292 0.74 0.64 0.84 89 81704 22 2 15 5 49
ASE_00296 0.64 0.54 0.76 78 91704 26 1 23 2 67
ASE_00297 0.62 0.53 0.72 52 52903 21 1 19 1 46
ASE_00298 0.48 0.43 0.53 49 67435 46 2 42 2 64
ASE_00328 0.76 0.67 0.87 75 72685 23 1 10 12 37
ASE_00332 0.45 0.37 0.55 51 81717 44 3 39 2 87
ASE_00340 0.58 0.54 0.63 46 45983 31 8 19 4 39
ASE_00342 0.82 0.76 0.88 87 62382 12 2 10 0 28
ASE_00353 0.65 0.62 0.69 66 57874 35 2 28 5 41
ASE_00361 0.58 0.49 0.69 62 75376 29 3 25 1 65
ASE_00362 0.74 0.65 0.86 59 48136 10 0 10 0 32
ASE_00363 0.81 0.73 0.90 69 51283 14 1 7 6 25
ASE_00364 0.63 0.56 0.71 59 54202 29 1 23 5 46
ASE_00366 0.62 0.57 0.67 56 58570 31 6 21 4 42
ASE_00367 0.57 0.53 0.61 46 42995 36 1 29 6 40
ASE_00369 0.82 0.74 0.92 79 55859 7 1 6 0 28
ASE_00370 0.86 0.81 0.92 68 41831 14 0 6 8 16
ASE_00372 0.67 0.59 0.77 59 51926 19 1 17 1 41
ASE_00374 0.81 0.73 0.90 64 44779 8 1 6 1 24
ASE_00376 0.66 0.61 0.71 64 56863 28 1 25 2 41
ASE_00377 0.61 0.55 0.69 59 57544 29 3 24 2 48
ASE_00379 0.54 0.48 0.61 43 45986 38 0 27 11 46
ASE_00382 0.86 0.81 0.92 68 41831 14 0 6 8 16
ASE_00383 0.79 0.72 0.85 76 54526 14 4 9 1 29
ASE_00384 0.70 0.65 0.75 60 48436 26 4 16 6 32
ASE_00386 0.65 0.60 0.70 58 50320 27 5 20 2 38
ASE_00387 0.67 0.63 0.70 66 55851 29 0 28 1 38
ASE_00388 0.51 0.47 0.56 42 45678 40 2 31 7 47
ASE_00390 0.85 0.80 0.89 68 42119 17 0 8 9 17
ASE_00393 0.70 0.63 0.77 59 47818 20 1 17 2 34
ASE_00394 0.80 0.72 0.88 67 46895 13 4 5 4 26
ASE_00395 0.73 0.69 0.77 58 41541 21 0 17 4 26
ASE_00396 0.72 0.66 0.79 55 41546 19 2 13 4 28
ASE_00397 0.74 0.69 0.79 72 54524 23 1 18 4 33
ASE_00398 0.68 0.62 0.76 64 55861 29 1 19 9 40
ASE_00400 0.74 0.69 0.80 73 57879 19 1 17 1 33
ASE_00401 0.52 0.44 0.63 55 76940 40 0 33 7 71
ASE_00402 0.76 0.69 0.84 59 42416 15 1 10 4 26
ASE_00403 0.66 0.58 0.76 62 55863 25 3 17 5 45
ASE_00404 0.78 0.73 0.83 62 42996 17 1 12 4 23
ASE_00406 0.82 0.73 0.91 69 48752 15 0 7 8 25
ASE_00411 0.57 0.53 0.62 47 49379 30 10 19 1 42
ASE_00412 0.56 0.50 0.62 53 58226 34 3 29 2 52
ASE_00413 0.60 0.57 0.64 46 44479 27 2 24 1 35
ASE_00415 0.60 0.57 0.63 59 54853 40 2 32 6 44
ASE_00416 0.69 0.59 0.80 75 77327 28 1 18 9 52
ASE_00419 0.75 0.68 0.83 70 54862 16 3 11 2 33
ASE_00422 0.65 0.63 0.67 59 46883 30 4 25 1 35
ASE_00423 0.84 0.77 0.92 84 56862 10 1 6 3 25
ASE_00428 0.57 0.54 0.60 68 76522 47 4 42 1 57
ASE_00430 0.79 0.76 0.82 74 46881 16 2 14 0 23
ASE_00437 0.67 0.60 0.75 81 79293 27 1 26 0 54
ASE_00441 0.66 0.57 0.77 64 64178 19 2 17 0 48
ASE_00448 0.63 0.59 0.67 66 64163 39 2 30 7 46
ASE_00451 0.68 0.60 0.77 75 70779 24 1 21 2 50
TMR_00017 0.59 0.56 0.62 57 67069 39 8 27 4 45
TMR_00018 0.59 0.54 0.65 50 64543 31 7 20 4 42
TMR_00038 0.73 0.66 0.79 73 71161 24 1 18 5 37
TMR_00042 0.61 0.57 0.65 56 62749 34 7 23 4 42
TMR_00046 0.65 0.63 0.67 60 62746 35 9 20 6 36
TMR_00048 0.59 0.55 0.63 52 64898 38 6 24 8 43
TMR_00080 0.51 0.46 0.56 44 70422 34 10 24 0 52
TMR_00082 0.65 0.59 0.71 57 67816 30 7 16 7 39
TMR_00123 0.64 0.59 0.68 60 66342 34 4 24 6 41
TMR_00137 0.33 0.28 0.38 25 61009 44 9 32 3 64
TMR_00142 0.62 0.64 0.61 65 70769 49 12 30 7 37
TMR_00207 0.40 0.35 0.45 36 72310 49 6 38 5 67
TMR_00257 0.68 0.61 0.76 60 67082 27 4 15 8 38
TMR_00271 0.64 0.56 0.74 51 64192 20 6 12 2 40
TMR_00366 0.64 0.60 0.67 60 67807 40 12 17 11 40
TMR_00378 0.67 0.63 0.71 61 67810 38 5 20 13 36
TMR_00399 0.48 0.45 0.52 42 64899 46 9 30 7 52
TMR_00404 0.59 0.59 0.60 54 67438 49 12 24 13 38
TMR_00427 0.53 0.41 0.69 40 67470 22 7 11 4 57
TMR_00443 0.67 0.59 0.77 61 67082 22 4 14 4 43
TMR_00451 0.52 0.45 0.60 40 63479 31 7 20 4 49
TMR_00458 0.70 0.63 0.77 59 63469 21 4 14 3 34
TMR_00469 0.75 0.73 0.78 73 64526 30 7 14 9 27
TMR_00472 0.76 0.73 0.80 71 64531 23 7 11 5 26
TMR_00519 0.60 0.57 0.64 54 63106 34 12 18 4 41
TMR_00520 0.67 0.62 0.73 61 63106 31 4 19 8 38
TMR_00522 0.53 0.47 0.60 46 63113 36 9 22 5 51
TMR_00528 0.51 0.45 0.58 44 63114 37 10 22 5 53
TMR_00568 0.62 0.59 0.65 58 60637 40 8 23 9 41
TMR_00571 0.69 0.65 0.73 64 60638 34 10 14 10 35
TMR_00580 0.62 0.61 0.63 61 60629 46 10 26 10 39
TMR_00584 0.65 0.61 0.69 59 60989 36 6 21 9 38
TMR_00586 0.60 0.59 0.61 57 60982 43 11 25 7 40
TMR_00616 0.65 0.63 0.68 62 67070 35 7 22 6 37
TMR_00699 0.69 0.60 0.80 61 67085 16 2 13 1 41
TMR_00702 0.63 0.54 0.73 54 67087 26 7 13 6 46

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Performance of Vsfold5 - scored lower in this pairwise comparison

1. Total counts & total scores for Vsfold5

Total Base Pair Counts
Total TP 6497
Total TN 10769130
Total FP 10187
Total FP CONTRA 1043
Total FP INCONS 8607
Total FP COMP 537
Total FN 12444
Total Scores
MCC 0.370
Average MCC ± 95% Confidence Intervals 0.364 ± 0.021
Sensitivity 0.343
Positive Predictive Value 0.402
Nr of predictions 184

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2. Individual counts for Vsfold5 [ download as .csv ]

RNA Chain Rfam family MCC SENS PPV TP TN FP FP CONTRA FP INCONS FP COMP FN
ASE_00005 0.41 0.37 0.46 43 57877 54 0 50 4 74
ASE_00006 0.42 0.40 0.45 37 47504 46 4 41 1 56
ASE_00007 0.37 0.34 0.41 37 59595 57 2 51 4 73
ASE_00012 0.39 0.36 0.42 44 73815 66 10 51 5 79
ASE_00018 0.44 0.39 0.50 52 80497 52 2 50 0 82
ASE_00020 0.21 0.19 0.24 24 73818 80 5 73 2 102
ASE_00035 0.21 0.20 0.23 24 70394 82 8 74 0 94
ASE_00037 0.00 0.00 0.00 0 59340 0 0 0 0 110
ASE_00038 0.49 0.47 0.53 47 53539 43 2 40 1 54
ASE_00040 0.25 0.23 0.27 30 78892 83 5 76 2 103
ASE_00041 0.42 0.39 0.45 42 57537 51 6 45 0 66
ASE_00044 0.47 0.45 0.49 47 54519 50 6 43 1 58
ASE_00064 0.39 0.37 0.40 33 45369 55 1 48 6 56
ASE_00068 0.44 0.40 0.49 34 37605 39 2 34 3 51
ASE_00074 0.40 0.37 0.43 44 67793 61 0 59 2 75
ASE_00077 0.33 0.31 0.34 27 45071 56 4 48 4 59
ASE_00078 0.32 0.30 0.33 25 42996 55 2 48 5 58
ASE_00080 0.35 0.32 0.38 39 71529 63 4 59 0 84
ASE_00081 0.39 0.35 0.43 34 49691 45 1 44 0 63
ASE_00082 0.44 0.41 0.47 48 70397 63 5 50 8 68
ASE_00083 0.62 0.57 0.67 63 62387 35 5 26 4 47
ASE_00084 0.47 0.44 0.49 44 53539 50 3 42 5 55
ASE_00087 0.45 0.39 0.51 56 88301 57 3 50 4 88
ASE_00090 0.50 0.50 0.52 50 55514 50 4 43 3 51
ASE_00092 0.41 0.38 0.44 43 63448 55 8 47 0 70
ASE_00099 0.46 0.42 0.52 50 64523 48 2 45 1 70
ASE_00104 0.58 0.54 0.62 64 64158 40 3 36 1 55
ASE_00105 0.31 0.29 0.33 32 64164 67 6 59 2 79
ASE_00107 0.43 0.39 0.47 50 73046 57 5 52 0 77
ASE_00115 0.49 0.48 0.52 48 54522 53 3 42 8 53
ASE_00118 0.38 0.35 0.40 36 60637 54 4 49 1 66
ASE_00119 0.71 0.68 0.75 73 62738 28 6 18 4 35
ASE_00123 0.38 0.36 0.39 31 38424 52 3 45 4 54
ASE_00126 0.48 0.44 0.53 36 40402 36 2 30 4 46
ASE_00128 0.54 0.51 0.57 51 53211 43 3 36 4 49
ASE_00129 0.61 0.57 0.66 63 62740 33 7 25 1 48
ASE_00131 0.42 0.38 0.46 32 39271 42 4 33 5 53
ASE_00134 0.28 0.26 0.30 25 50320 62 6 52 4 70
ASE_00135 0.35 0.32 0.38 35 63097 63 3 55 5 74
ASE_00136 0.66 0.62 0.71 57 48125 31 3 20 8 35
ASE_00137 0.56 0.53 0.58 52 48427 38 1 36 1 46
ASE_00138 0.45 0.43 0.47 35 40395 42 5 35 2 46
ASE_00140 0.46 0.42 0.50 53 70771 52 3 49 0 72
ASE_00142 0.43 0.41 0.46 50 67053 58 7 51 0 72
ASE_00146 0.32 0.28 0.37 35 70782 61 1 58 2 89
ASE_00153 0.28 0.32 0.26 23 57540 91 12 55 24 50
ASE_00163 0.37 0.37 0.38 34 53211 63 7 49 7 59
ASE_00165 0.42 0.40 0.44 40 52884 51 4 47 0 61
ASE_00170 0.40 0.40 0.41 37 48737 54 10 44 0 56
ASE_00171 0.51 0.46 0.58 43 48442 35 5 26 4 51
ASE_00172 0.48 0.46 0.51 49 58900 47 8 39 0 57
ASE_00174 0.48 0.46 0.51 50 60977 48 1 47 0 59
ASE_00175 0.35 0.34 0.36 36 59932 65 3 60 2 71
ASE_00179 0.53 0.54 0.53 45 44168 41 10 30 1 39
ASE_00180 0.00 0.00 0.00 0 51360 0 0 0 0 100
ASE_00181 0.55 0.51 0.59 54 57539 41 2 35 4 52
ASE_00182 0.38 0.34 0.43 46 84149 60 5 55 0 90
ASE_00183 0.53 0.50 0.56 57 61323 47 4 41 2 56
ASE_00184 0.41 0.38 0.44 39 54526 55 1 49 5 63
ASE_00185 0.37 0.35 0.40 45 73423 68 6 62 0 83
ASE_00190 0.37 0.32 0.43 29 45384 42 2 36 4 61
ASE_00197 0.27 0.25 0.30 36 89132 87 7 78 2 109
ASE_00198 0.42 0.40 0.45 41 52558 56 1 50 5 61
ASE_00203 0.00 0.00 0.00 0 46665 0 0 0 0 96
ASE_00214 0.57 0.55 0.59 57 56183 47 3 37 7 46
ASE_00215 0.49 0.43 0.57 43 48440 37 6 27 4 56
ASE_00216 0.63 0.61 0.66 50 39264 27 4 22 1 32
ASE_00217 0.13 0.12 0.14 11 40394 67 2 63 2 79
ASE_00221 0.40 0.37 0.43 43 64520 57 5 52 0 74
ASE_00228 0.48 0.47 0.49 40 46890 41 13 28 0 46
ASE_00229 0.52 0.49 0.54 43 42407 36 8 28 0 44
ASE_00231 0.59 0.57 0.62 55 47806 34 3 31 0 41
ASE_00232 0.44 0.43 0.44 36 38422 45 7 38 0 48
ASE_00234 0.27 0.24 0.31 31 75367 68 4 64 0 98
ASE_00238 0.30 0.28 0.32 32 64162 67 7 60 0 82
ASE_00241 0.35 0.33 0.38 29 43879 52 0 48 4 58
ASE_00242 0.44 0.43 0.45 48 60969 58 11 47 0 64
ASE_00254 0.32 0.30 0.33 25 36781 55 4 46 5 57
ASE_00257 0.55 0.52 0.59 50 50955 35 5 30 0 47
ASE_00263 0.37 0.34 0.39 41 70396 63 6 57 0 79
ASE_00267 0.24 0.23 0.25 20 45070 64 6 54 4 68
ASE_00270 0.37 0.35 0.38 45 72273 73 4 68 1 83
ASE_00274 0.36 0.34 0.39 35 55522 54 8 46 0 68
ASE_00277 0.30 0.29 0.31 26 48122 57 13 44 0 65
ASE_00279 0.32 0.30 0.34 30 53214 57 6 51 0 71
ASE_00280 0.42 0.39 0.46 38 51921 45 6 38 1 60
ASE_00281 0.45 0.40 0.52 35 44484 37 3 29 5 53
ASE_00282 0.48 0.43 0.53 55 77711 55 3 46 6 72
ASE_00283 0.46 0.43 0.49 46 61683 47 10 37 0 61
ASE_00284 0.27 0.26 0.28 28 58211 73 7 65 1 80
ASE_00285 0.40 0.37 0.44 45 68903 58 1 57 0 77
ASE_00286 0.38 0.36 0.41 33 46584 50 4 44 2 59
ASE_00287 0.39 0.34 0.45 35 54868 45 1 42 2 68
ASE_00292 0.00 0.00 0.00 0 81810 0 0 0 0 138
ASE_00296 0.37 0.34 0.41 50 91683 73 5 68 0 95
ASE_00297 0.44 0.44 0.44 43 52878 54 2 52 0 55
ASE_00298 0.40 0.37 0.44 42 67432 57 4 50 3 71
ASE_00328 0.37 0.35 0.39 39 72671 67 4 57 6 73
ASE_00332 0.46 0.44 0.48 61 81684 66 10 55 1 77
ASE_00340 0.58 0.55 0.62 47 45980 29 13 16 0 38
ASE_00342 0.39 0.35 0.43 40 62388 54 0 53 1 75
ASE_00353 0.59 0.57 0.61 61 57870 39 6 33 0 46
ASE_00361 0.35 0.32 0.38 41 75357 68 9 59 0 86
ASE_00362 0.48 0.46 0.51 42 48122 41 6 35 0 49
ASE_00363 0.42 0.41 0.43 39 51269 58 2 50 6 55
ASE_00364 0.31 0.30 0.33 31 54190 65 4 60 1 74
ASE_00366 0.35 0.35 0.35 34 58556 66 14 49 3 64
ASE_00367 0.26 0.24 0.27 21 42994 60 3 53 4 65
ASE_00369 0.37 0.36 0.38 38 55846 66 0 61 5 69
ASE_00370 0.41 0.38 0.44 32 41833 47 1 39 7 52
ASE_00372 0.45 0.42 0.48 42 51915 48 6 40 2 58
ASE_00374 0.44 0.42 0.46 37 44770 43 6 37 0 51
ASE_00376 0.45 0.42 0.48 44 56861 52 4 44 4 61
ASE_00377 0.60 0.56 0.65 60 57537 37 2 31 4 47
ASE_00379 0.36 0.36 0.37 32 45969 57 11 44 2 57
ASE_00382 0.44 0.42 0.47 35 41831 43 0 39 4 49
ASE_00383 0.44 0.41 0.47 43 54524 50 8 40 2 62
ASE_00384 0.50 0.47 0.54 43 48437 44 2 34 8 49
ASE_00386 0.40 0.38 0.44 36 50321 51 8 38 5 60
ASE_00387 0.54 0.49 0.59 51 55858 39 4 32 3 53
ASE_00388 0.50 0.47 0.54 42 45675 41 2 34 5 47
ASE_00390 0.50 0.46 0.54 39 42123 38 2 31 5 46
ASE_00393 0.45 0.43 0.48 40 47811 49 1 43 5 53
ASE_00394 0.32 0.30 0.35 28 46890 53 9 44 0 65
ASE_00395 0.45 0.43 0.48 36 41541 43 5 34 4 48
ASE_00396 0.44 0.42 0.45 35 41539 44 7 35 2 48
ASE_00397 0.35 0.33 0.38 35 54523 58 1 56 1 70
ASE_00398 0.48 0.44 0.52 46 55857 46 2 40 4 58
ASE_00400 0.52 0.49 0.56 52 57877 45 5 36 4 54
ASE_00401 0.37 0.35 0.39 44 76914 70 6 64 0 82
ASE_00402 0.30 0.28 0.33 24 42413 49 5 44 0 61
ASE_00403 0.35 0.33 0.38 35 55853 62 5 52 5 72
ASE_00404 0.26 0.25 0.28 21 42996 58 4 50 4 64
ASE_00406 0.47 0.45 0.51 42 48745 47 0 41 6 52
ASE_00411 0.34 0.34 0.34 30 49367 60 7 51 2 59
ASE_00412 0.32 0.30 0.36 31 58224 56 7 49 0 74
ASE_00413 0.45 0.44 0.46 36 44473 46 4 38 4 45
ASE_00415 0.40 0.38 0.42 39 54854 56 4 49 3 64
ASE_00416 0.00 0.00 0.00 0 77421 0 0 0 0 127
ASE_00419 0.61 0.58 0.65 60 54853 34 3 30 1 43
ASE_00422 0.55 0.52 0.58 49 46886 41 2 34 5 45
ASE_00423 0.51 0.51 0.51 56 56844 53 11 42 0 53
ASE_00428 0.24 0.24 0.25 30 76515 91 2 89 0 95
ASE_00430 0.62 0.58 0.66 56 46886 34 2 27 5 41
ASE_00437 0.00 0.00 0.00 0 79401 0 0 0 0 135
ASE_00441 0.33 0.30 0.35 34 64164 63 6 57 0 78
ASE_00448 0.36 0.34 0.39 38 64164 59 4 55 0 74
ASE_00451 0.35 0.32 0.38 40 70771 65 2 63 0 85
TMR_00017 0.29 0.28 0.29 29 67062 74 8 62 4 73
TMR_00018 0.27 0.27 0.27 25 64528 72 10 57 5 67
TMR_00038 0.19 0.18 0.19 20 71149 91 11 73 7 90
TMR_00042 0.15 0.15 0.15 15 62738 86 16 66 4 83
TMR_00046 0.00 0.00 0.00 0 62835 0 0 0 0 96
TMR_00048 0.25 0.26 0.25 25 64879 82 15 61 6 70
TMR_00080 0.35 0.38 0.32 36 70388 76 16 60 0 60
TMR_00082 0.39 0.40 0.38 38 67796 62 11 51 0 58
TMR_00123 0.28 0.28 0.29 28 66332 75 9 61 5 73
TMR_00137 0.15 0.15 0.15 13 60990 82 6 66 10 76
TMR_00142 0.16 0.17 0.15 17 70764 98 20 75 3 85
TMR_00207 0.16 0.17 0.17 17 72287 91 9 77 5 86
TMR_00257 0.17 0.16 0.18 16 67070 80 6 69 5 82
TMR_00271 0.17 0.18 0.17 16 64166 88 15 64 9 75
TMR_00366 0.26 0.26 0.26 26 67796 80 13 61 6 74
TMR_00378 0.11 0.11 0.10 11 67790 100 15 80 5 86
TMR_00399 0.14 0.14 0.14 13 64884 86 17 66 3 81
TMR_00404 0.26 0.27 0.25 25 67428 83 15 60 8 67
TMR_00427 0.00 0.00 0.00 0 67528 0 0 0 0 97
TMR_00443 0.15 0.14 0.16 15 67066 84 8 72 4 89
TMR_00451 0.37 0.38 0.36 34 63451 65 16 45 4 55
TMR_00458 0.14 0.14 0.14 13 63451 89 13 69 7 80
TMR_00469 0.12 0.12 0.12 12 64521 92 8 79 5 88
TMR_00472 0.27 0.28 0.27 27 64520 80 4 69 7 70
TMR_00519 0.12 0.12 0.13 11 63107 82 11 61 10 84
TMR_00520 0.26 0.27 0.25 27 63084 79 13 66 0 72
TMR_00522 0.17 0.16 0.17 16 63096 83 17 61 5 81
TMR_00528 0.31 0.31 0.31 30 63092 73 16 52 5 67
TMR_00568 0.16 0.15 0.17 15 60636 81 3 72 6 84
TMR_00571 0.00 0.00 0.00 0 60726 0 0 0 0 99
TMR_00580 0.23 0.23 0.24 23 60629 80 8 66 6 77
TMR_00584 0.18 0.19 0.18 18 60977 85 11 69 5 79
TMR_00586 0.16 0.15 0.16 15 60984 85 11 65 9 82
TMR_00616 0.32 0.31 0.32 31 67064 72 11 55 6 68
TMR_00699 0.28 0.28 0.27 29 67054 82 14 64 4 73
TMR_00702 0.26 0.25 0.28 25 67072 71 8 56 7 75

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Matthews Correlation Coeffient, Sensitivity and Positive Predictive Value have been calculated based on the paper by Gardener & Giegerich, 2004.