CompaRNA - on-line benchmarks of RNA structure prediction methods

Laboratory of Structural Bioinformatics @ Adam Mickiewicz University in Poznan

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Overview

Metric	PETfold_pre2.0(seed)		Contrafold
MCC	0.681	>	0.552
Average MCC ± 95% Confidence Intervals	0.675 ± 0.011	>	0.548 ± 0.014
Sensitivity	0.590	>	0.537
Positive Predictive Value	0.787	>	0.569
Total TP	30417	>	27687
Total TN	33013907	>	33003880
Total FP	11857	<	25540
Total FP CONTRA	2268	<	3750
Total FP INCONS	5966	<	17241
Total FP COMP	3623	<	4549
Total FN	21163	<	23893
P-value	3.56938820447e-08

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Performance plots

Comparison of performance of PETfold_pre2.0(seed) and Contrafold. Positive Predictive Value (PPV) is plotted against sensitivity. Each dot represents a single test of each method. See tables below for raw data (individual counts for PETfold_pre2.0(seed) and Contrafold).
Average Matthews Correlation Coefficients (MCC) with 95% confidence intervals (CIs) were plotted for different RNA families, for which at least 3 members were present in the benchmarking dataset. 'n' denotes the number of MCCs used to calculate the average and CI. See tables below for raw data (individual counts for PETfold_pre2.0(seed) and Contrafold).
Comparison of average Matthews Correlation Coefficients (MCCs) for PETfold_pre2.0(seed) and Contrafold. The whiskers correspond to 95% confidence intervals (CIs). 'n' denotes the number of MCCs used to calculate average MCCs and CIs. See tables below for raw data (individual counts for PETfold_pre2.0(seed) and Contrafold).

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Performance of PETfold_pre2.0(seed) - scored higher in this pairwise comparison

1. Total counts & total scores for PETfold_pre2.0(seed)

Total Base Pair Counts
Total TP	30417
Total TN	33013907
Total FP	11857
Total FP CONTRA	2268
Total FP INCONS	5966
Total FP COMP	3623
Total FN	21163

Total Scores
MCC	0.681
Average MCC ± 95% Confidence Intervals	0.675 ± 0.011
Sensitivity	0.590
Positive Predictive Value	0.787
Nr of predictions	508

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2. Individual counts for PETfold_pre2.0(seed) [ download as .csv ]

RNA Chain	Rfam family	MCC	SENS	PPV	TP	TN	FP	FP CONTRA	FP INCONS	FP COMP	FN
ASE_00001	RNaseP_arch links to Rfam database...	0.68	0.57	0.80	43	34137	14	4	7	3	32
ASE_00002	RNaseP_arch links to Rfam database...	0.72	0.62	0.85	45	35458	13	3	5	5	28
ASE_00004	RNaseP_bact_a links to Rfam database...	0.72	0.62	0.83	60	47823	17	2	10	5	37
ASE_00005	RNaseP_bact_a links to Rfam database...	0.77	0.68	0.88	80	57879	16	4	7	5	37
ASE_00006	RNaseP_bact_a links to Rfam database...	0.72	0.63	0.81	59	47513	19	2	12	5	34
ASE_00007	RNaseP_bact_a links to Rfam database...	0.88	0.86	0.90	95	59579	16	4	7	5	15
ASE_00009	RNaseP_arch links to Rfam database...	0.79	0.75	0.85	50	26047	14	2	7	5	17
ASE_00012	RNaseP_bact_a links to Rfam database...	0.78	0.72	0.85	88	73817	23	6	9	8	35
ASE_00014	RNaseP_arch links to Rfam database...	0.71	0.60	0.84	64	54209	16	3	9	4	42
ASE_00017	RNaseP_nuc links to Rfam database...	0.64	0.61	0.67	39	50982	24	3	16	5	25
ASE_00018	RNaseP_bact_a links to Rfam database...	0.78	0.70	0.87	94	80493	19	5	9	5	40
ASE_00020	RNaseP_bact_a links to Rfam database...	0.66	0.54	0.82	68	73837	21	8	7	6	58
ASE_00021	RNaseP_bact_a links to Rfam database...	0.64	0.51	0.79	82	104092	30	7	15	8	78
ASE_00022	RNaseP_bact_b links to Rfam database...	0.83	0.76	0.90	94	82924	24	2	8	14	30
ASE_00023	RNaseP_bact_a links to Rfam database...	0.44	0.38	0.52	48	84163	47	10	34	3	79
ASE_00025	RNaseP_nuc links to Rfam database...	0.56	0.51	0.62	36	78548	27	3	19	5	35
ASE_00026	RNaseP_bact_a links to Rfam database...	0.80	0.78	0.83	86	59581	24	4	14	6	24
ASE_00028	RNaseP_bact_b links to Rfam database...	0.83	0.75	0.90	95	84561	22	2	8	12	31
ASE_00029	RNaseP_bact_a links to Rfam database...	0.40	0.34	0.47	42	82939	51	6	41	4	80
ASE_00030	RNaseP_bact_a links to Rfam database...	0.70	0.61	0.81	88	85383	23	5	15	3	57
ASE_00031	RNaseP_bact_a links to Rfam database...	0.43	0.37	0.51	46	86646	46	4	40	2	80
ASE_00032	RNaseP_bact_a links to Rfam database...	0.33	0.28	0.39	33	80115	55	7	45	3	85
ASE_00033	RNaseP_bact_a links to Rfam database...	0.85	0.79	0.91	96	64874	16	5	5	6	25
ASE_00035	RNaseP_bact_a links to Rfam database...	0.83	0.78	0.88	92	70395	21	4	9	8	26
ASE_00036	RNaseP_bact_a links to Rfam database...	0.74	0.64	0.86	84	75757	19	4	10	5	48
ASE_00037	RNaseP_bact_a links to Rfam database...	0.90	0.88	0.92	97	59234	14	4	5	5	13
ASE_00038	RNaseP_bact_a links to Rfam database...	0.80	0.72	0.89	73	53546	14	4	5	5	28
ASE_00040	RNaseP_bact_a links to Rfam database...	0.81	0.73	0.91	97	78896	16	4	6	6	36
ASE_00041	RNaseP_bact_a links to Rfam database...	0.83	0.81	0.85	88	57527	20	4	11	5	20
ASE_00042	RNaseP_bact_a links to Rfam database...	0.70	0.60	0.81	87	89993	24	4	16	4	58
ASE_00044	RNaseP_bact_a links to Rfam database...	0.89	0.88	0.91	92	54514	14	4	5	5	13
ASE_00046	RNaseP_bact_a links to Rfam database...	0.78	0.76	0.81	78	50307	23	3	15	5	25
ASE_00047	RNaseP_bact_a links to Rfam database...	0.74	0.65	0.85	84	74206	19	5	10	4	46
ASE_00052	RNaseP_bact_a links to Rfam database...	0.76	0.72	0.79	81	61323	27	5	16	6	31
ASE_00053	RNaseP_bact_a links to Rfam database...	0.74	0.64	0.85	85	79301	20	7	8	5	48
ASE_00057	RNaseP_bact_a links to Rfam database...	0.72	0.64	0.82	86	82110	24	5	14	5	48
ASE_00064	RNaseP_bact_a links to Rfam database...	0.83	0.79	0.88	70	45371	15	4	6	5	19
ASE_00066	RNaseP_bact_a links to Rfam database...	0.78	0.68	0.90	89	72291	14	5	5	4	41
ASE_00068	RNaseP_bact_a links to Rfam database...	0.63	0.55	0.72	47	37610	20	4	14	2	38
ASE_00069	RNaseP_bact_a links to Rfam database...	0.75	0.64	0.88	89	82927	18	4	8	6	51
ASE_00074	RNaseP_bact_a links to Rfam database...	0.87	0.83	0.92	99	67788	14	4	5	5	20
ASE_00075	RNaseP_bact_a links to Rfam database...	0.66	0.52	0.83	85	108709	27	6	11	10	77
ASE_00076	RNaseP_bact_a links to Rfam database...	0.69	0.58	0.83	68	68183	20	3	11	6	50
ASE_00077	RNaseP_bact_a links to Rfam database...	0.84	0.83	0.86	71	45067	16	5	7	4	15
ASE_00078	RNaseP_bact_a links to Rfam database...	0.91	0.88	0.94	73	42993	12	3	2	7	10
ASE_00079	RNaseP_bact_a links to Rfam database...	0.70	0.63	0.78	63	55530	24	4	14	6	37
ASE_00080	RNaseP_bact_a links to Rfam database...	0.47	0.38	0.58	47	71550	40	4	30	6	76
ASE_00081	RNaseP_bact_a links to Rfam database...	0.82	0.75	0.89	73	49688	15	3	6	6	24
ASE_00082	RNaseP_bact_a links to Rfam database...	0.70	0.57	0.86	66	70423	20	3	8	9	50
ASE_00083	RNaseP_bact_a links to Rfam database...	0.76	0.65	0.88	72	62399	16	4	6	6	38
ASE_00084	RNaseP_bact_a links to Rfam database...	0.79	0.72	0.87	71	53546	16	4	7	5	28
ASE_00087	RNaseP_bact_a links to Rfam database...	0.66	0.50	0.88	72	88328	16	4	6	6	72
ASE_00090	RNaseP_bact_a links to Rfam database...	0.80	0.72	0.89	73	55529	15	4	5	6	28
ASE_00092	RNaseP_bact_a links to Rfam database...	0.70	0.59	0.82	67	63464	21	6	9	6	46
ASE_00096	RNaseP_bact_a links to Rfam database...	0.66	0.56	0.78	64	63464	24	3	15	6	51
ASE_00099	RNaseP_bact_a links to Rfam database...	0.87	0.83	0.92	99	64512	14	4	5	5	21
ASE_00100	RNaseP_nuc links to Rfam database...	0.59	0.51	0.67	39	82157	24	3	16	5	37
ASE_00102	RNaseP_bact_a links to Rfam database...	0.59	0.47	0.74	78	117750	32	5	22	5	88
ASE_00104	RNaseP_bact_a links to Rfam database...	0.86	0.82	0.91	98	64153	15	4	6	5	21
ASE_00105	RNaseP_bact_a links to Rfam database...	0.58	0.50	0.67	56	64178	32	8	19	5	55
ASE_00107	RNaseP_bact_a links to Rfam database...	0.84	0.77	0.91	98	73045	15	4	6	5	29
ASE_00108	RNaseP_nuc links to Rfam database...	0.64	0.62	0.67	39	46913	24	3	16	5	24
ASE_00111	RNaseP_nuc links to Rfam database...	0.82	0.81	0.84	46	50031	13	4	5	4	11
ASE_00112	RNaseP_bact_a links to Rfam database...	0.42	0.36	0.50	42	75382	44	4	38	2	74
ASE_00115	RNaseP_bact_a links to Rfam database...	0.79	0.70	0.89	71	54535	14	4	5	5	30
ASE_00116	RNaseP_arch links to Rfam database...	0.77	0.71	0.84	47	31570	13	3	6	4	19
ASE_00118	RNaseP_bact_a links to Rfam database...	0.74	0.65	0.85	66	60648	18	4	8	6	36
ASE_00119	RNaseP_bact_a links to Rfam database...	0.68	0.55	0.84	59	62765	15	5	6	4	49
ASE_00120	RNaseP_arch links to Rfam database...	0.78	0.69	0.88	65	46897	14	3	6	5	29
ASE_00121	RNaseP_arch links to Rfam database...	0.76	0.68	0.84	63	45075	16	4	8	4	29
ASE_00122	RNaseP_bact_a links to Rfam database...	0.85	0.82	0.89	72	43284	14	3	6	5	16
ASE_00123	RNaseP_bact_a links to Rfam database...	0.73	0.64	0.83	54	38438	16	4	7	5	31
ASE_00125	RNaseP_bact_a links to Rfam database...	0.71	0.61	0.83	54	39275	16	4	7	5	34
ASE_00126	RNaseP_bact_a links to Rfam database...	0.86	0.84	0.87	69	40391	16	4	6	6	13
ASE_00128	RNaseP_bact_a links to Rfam database...	0.81	0.73	0.89	73	53219	14	4	5	5	27
ASE_00129	RNaseP_bact_a links to Rfam database...	0.76	0.66	0.89	73	62753	14	4	5	5	38
ASE_00131	RNaseP_bact_a links to Rfam database...	0.69	0.59	0.82	50	39279	16	4	7	5	35
ASE_00132	RNaseP_bact_a links to Rfam database...	0.80	0.75	0.87	71	50321	16	6	5	5	24
ASE_00134	RNaseP_bact_a links to Rfam database...	0.78	0.73	0.84	69	50321	18	4	9	5	26
ASE_00135	RNaseP_bact_a links to Rfam database...	0.63	0.55	0.71	60	63106	27	6	18	3	49
ASE_00136	RNaseP_bact_a links to Rfam database...	0.83	0.78	0.88	72	48123	15	4	6	5	20
ASE_00137	RNaseP_bact_a links to Rfam database...	0.80	0.69	0.93	68	48443	10	3	2	5	30
ASE_00138	RNaseP_bact_a links to Rfam database...	0.86	0.84	0.87	68	40392	15	5	5	5	13
ASE_00139	RNaseP_bact_a links to Rfam database...	0.74	0.64	0.85	67	54206	17	4	8	5	37
ASE_00140	RNaseP_bact_a links to Rfam database...	0.66	0.54	0.82	67	70794	21	9	6	6	58
ASE_00142	RNaseP_bact_a links to Rfam database...	0.83	0.77	0.90	94	67056	17	4	7	6	28
ASE_00145	RNaseP_arch links to Rfam database...	0.74	0.62	0.88	69	70047	13	3	6	4	42
ASE_00146	RNaseP_bact_a links to Rfam database...	0.83	0.77	0.90	95	70770	16	4	7	5	29
ASE_00148	RNaseP_arch links to Rfam database...	0.59	0.42	0.84	64	112499	16	3	9	4	90
ASE_00151	RNaseP_bact_a links to Rfam database...	0.83	0.83	0.84	81	51906	21	8	8	5	17
ASE_00153	RNaseP_nuc links to Rfam database...	0.63	0.55	0.71	40	57574	20	3	13	4	33
ASE_00154	RNaseP_arch links to Rfam database...	0.70	0.60	0.82	64	65263	18	3	11	4	43
ASE_00155	RNaseP_arch links to Rfam database...	0.66	0.49	0.88	69	93450	13	3	6	4	73
ASE_00163	RNaseP_bact_a links to Rfam database...	0.82	0.77	0.88	72	53219	15	5	5	5	21
ASE_00165	RNaseP_bact_a links to Rfam database...	0.79	0.67	0.92	68	52901	12	3	3	6	33
ASE_00168	RNaseP_nuc links to Rfam database...	0.64	0.61	0.67	39	60668	24	3	16	5	25
ASE_00169	RNaseP_bact_a links to Rfam database...	0.73	0.64	0.83	68	57209	19	4	10	5	39
ASE_00170	RNaseP_bact_a links to Rfam database...	0.78	0.73	0.83	68	48746	19	5	9	5	25
ASE_00171	RNaseP_bact_a links to Rfam database...	0.82	0.76	0.89	71	48436	15	4	5	6	23
ASE_00172	RNaseP_bact_a links to Rfam database...	0.77	0.68	0.88	72	58914	15	5	5	5	34
ASE_00174	RNaseP_bact_a links to Rfam database...	0.69	0.60	0.79	65	60993	22	4	13	5	44
ASE_00175	RNaseP_bact_a links to Rfam database...	0.72	0.64	0.82	68	59948	20	5	10	5	39
ASE_00176	RNaseP_bact_a links to Rfam database...	0.70	0.60	0.83	66	59951	19	5	9	5	44
ASE_00179	RNaseP_bact_a links to Rfam database...	0.83	0.80	0.86	67	44175	14	5	6	3	17
ASE_00180	RNaseP_bact_a links to Rfam database...	0.80	0.73	0.88	73	51277	15	5	5	5	27
ASE_00181	RNaseP_bact_a links to Rfam database...	0.71	0.62	0.80	66	57548	22	7	9	6	40
ASE_00182	RNaseP_bact_a links to Rfam database...	0.68	0.53	0.88	72	84173	15	4	6	5	64
ASE_00183	RNaseP_bact_a links to Rfam database...	0.75	0.65	0.88	73	61342	15	5	5	5	40
ASE_00184	RNaseP_bact_a links to Rfam database...	0.80	0.72	0.89	73	54533	14	3	6	5	29
ASE_00185	RNaseP_bact_a links to Rfam database...	0.69	0.54	0.87	69	73457	15	5	5	5	59
ASE_00186	RNaseP_bact_a links to Rfam database...	0.73	0.65	0.81	86	78897	26	4	16	6	46
ASE_00187	RNaseP_arch links to Rfam database...	0.67	0.54	0.83	62	68560	17	4	9	4	53
ASE_00189	RNaseP_bact_b links to Rfam database...	0.80	0.76	0.84	78	63097	27	2	13	12	24
ASE_00190	RNaseP_bact_b links to Rfam database...	0.76	0.69	0.85	62	45378	20	2	9	9	28
ASE_00192	RNaseP_bact_b links to Rfam database...	0.53	0.44	0.64	59	84574	40	3	30	7	74
ASE_00194	RNaseP_bact_b links to Rfam database...	0.75	0.66	0.86	78	73445	25	2	11	12	41
ASE_00196	RNaseP_arch links to Rfam database...	0.74	0.69	0.80	52	31561	18	2	11	5	23
ASE_00197	RNaseP_bact_a links to Rfam database...	0.70	0.59	0.82	86	89148	24	4	15	5	59
ASE_00198	RNaseP_bact_a links to Rfam database...	0.80	0.72	0.89	73	52568	15	4	5	6	29
ASE_00203	RNaseP_bact_a links to Rfam database...	0.80	0.72	0.88	69	46587	14	4	5	5	27
ASE_00204	RNaseP_bact_b links to Rfam database...	0.77	0.69	0.86	77	67806	26	3	10	13	35
ASE_00205	RNaseP_arch links to Rfam database...	0.79	0.70	0.89	63	45985	13	4	4	5	27
ASE_00209	RNaseP_arch links to Rfam database...	0.81	0.75	0.88	66	42996	13	3	6	4	22
ASE_00210	RNaseP_arch links to Rfam database...	0.68	0.65	0.71	42	27202	24	2	15	7	23
ASE_00212	RNaseP_bact_a links to Rfam database...	0.69	0.57	0.84	85	93860	21	4	12	5	63
ASE_00213	RNaseP_arch links to Rfam database...	0.78	0.74	0.83	49	27202	17	2	8	7	17
ASE_00214	RNaseP_bact_a links to Rfam database...	0.78	0.70	0.88	72	56198	16	5	5	6	31
ASE_00215	RNaseP_bact_a links to Rfam database...	0.60	0.49	0.72	49	48448	21	4	15	2	50
ASE_00216	RNaseP_bact_a links to Rfam database...	0.91	0.85	0.97	70	39268	8	2	0	6	12
ASE_00217	RNaseP_bact_a links to Rfam database...	0.86	0.82	0.89	74	40387	15	4	5	6	16
ASE_00221	RNaseP_bact_a links to Rfam database...	0.85	0.81	0.90	95	64514	16	4	7	5	22
ASE_00222	RNaseP_arch links to Rfam database...	0.62	0.44	0.88	69	112023	13	3	6	4	88
ASE_00227	RNaseP_bact_a links to Rfam database...	0.59	0.50	0.69	67	78906	33	3	27	3	66
ASE_00228	RNaseP_bact_a links to Rfam database...	0.83	0.76	0.90	65	46899	13	3	4	6	21
ASE_00229	RNaseP_bact_a links to Rfam database...	0.87	0.80	0.93	70	42411	10	2	3	5	17
ASE_00231	RNaseP_bact_a links to Rfam database...	0.72	0.63	0.83	60	47823	17	2	10	5	36
ASE_00232	RNaseP_bact_a links to Rfam database...	0.90	0.83	0.97	70	38431	7	2	0	5	14
ASE_00234	RNaseP_bact_a links to Rfam database...	0.66	0.53	0.82	68	75383	21	9	6	6	61
ASE_00237	RNaseP_nuc links to Rfam database...	0.83	0.82	0.84	46	45698	13	4	5	4	10
ASE_00238	RNaseP_bact_a links to Rfam database...	0.66	0.56	0.78	64	64179	24	7	11	6	50
ASE_00240	RNaseP_bact_a links to Rfam database...	0.69	0.63	0.75	59	46586	25	3	17	5	34
ASE_00241	RNaseP_bact_a links to Rfam database...	0.85	0.83	0.88	72	43874	15	4	6	5	15
ASE_00242	RNaseP_bact_a links to Rfam database...	0.89	0.87	0.92	97	60969	15	4	5	6	15
ASE_00246	RNaseP_nuc links to Rfam database...	0.64	0.60	0.69	40	48147	23	3	15	5	27
ASE_00247	RNaseP_nuc links to Rfam database...	0.64	0.61	0.67	39	54227	24	3	16	5	25
ASE_00248	RNaseP_bact_a links to Rfam database...	0.88	0.85	0.92	97	62375	15	4	5	6	17
ASE_00250	RNaseP_bact_a links to Rfam database...	0.78	0.70	0.86	92	78896	20	5	10	5	39
ASE_00252	RNaseP_bact_a links to Rfam database...	0.66	0.51	0.86	86	115340	23	5	9	9	82
ASE_00254	RNaseP_bact_a links to Rfam database...	0.89	0.83	0.96	68	36785	9	2	1	6	14
ASE_00255	RNaseP_bact_a links to Rfam database...	0.66	0.59	0.75	77	74588	31	5	21	5	53
ASE_00257	RNaseP_bact_a links to Rfam database...	0.76	0.69	0.83	67	50959	19	5	9	5	30
ASE_00259	RNaseP_bact_a links to Rfam database...	0.67	0.62	0.73	75	73050	33	2	26	5	46
ASE_00263	RNaseP_bact_a links to Rfam database...	0.73	0.60	0.88	72	70418	15	5	5	5	48
ASE_00264	RNaseP_nuc links to Rfam database...	0.62	0.47	0.81	47	49083	15	2	9	4	53
ASE_00267	RNaseP_bact_a links to Rfam database...	0.85	0.82	0.89	72	45069	14	3	6	5	16
ASE_00270	RNaseP_bact_a links to Rfam database...	0.59	0.45	0.77	57	72316	22	3	14	5	71
ASE_00274	RNaseP_bact_a links to Rfam database...	0.71	0.63	0.80	65	55530	21	6	10	5	38
ASE_00277	RNaseP_bact_a links to Rfam database...	0.75	0.68	0.82	62	48129	19	8	6	5	29
ASE_00279	RNaseP_bact_a links to Rfam database...	0.77	0.69	0.86	70	53220	16	4	7	5	31
ASE_00280	RNaseP_bact_a links to Rfam database...	0.76	0.69	0.83	68	51921	19	5	9	5	30
ASE_00281	RNaseP_bact_a links to Rfam database...	0.84	0.81	0.88	71	44470	15	4	6	5	17
ASE_00282	RNaseP_bact_a links to Rfam database...	0.71	0.57	0.88	73	77732	15	5	5	5	54
ASE_00283	RNaseP_bact_a links to Rfam database...	0.77	0.67	0.88	72	61694	15	4	6	5	35
ASE_00284	RNaseP_bact_a links to Rfam database...	0.76	0.67	0.87	72	58228	16	6	5	5	36
ASE_00285	RNaseP_bact_a links to Rfam database...	0.72	0.59	0.88	72	68924	15	4	6	5	50
ASE_00286	RNaseP_bact_a links to Rfam database...	0.82	0.77	0.88	71	46584	15	4	6	5	21
ASE_00287	RNaseP_bact_a links to Rfam database...	0.70	0.62	0.78	64	54864	23	3	15	5	39
ASE_00288	RNaseP_bact_a links to Rfam database...	0.82	0.77	0.87	72	45973	16	5	6	5	21
ASE_00289	RNaseP_bact_a links to Rfam database...	0.66	0.54	0.82	85	100921	24	5	14	5	72
ASE_00292	RNaseP_bact_a links to Rfam database...	0.80	0.70	0.91	97	81703	16	4	6	6	41
ASE_00294	RNaseP_bact_a links to Rfam database...	0.71	0.57	0.90	97	114373	16	4	7	5	74
ASE_00295	RNaseP_bact_a links to Rfam database...	0.78	0.69	0.87	91	73815	19	4	10	5	40
ASE_00296	RNaseP_bact_a links to Rfam database...	0.74	0.64	0.86	93	91698	20	5	10	5	52
ASE_00297	RNaseP_bact_a links to Rfam database...	0.72	0.64	0.80	63	52896	21	6	10	5	35
ASE_00298	RNaseP_bact_a links to Rfam database...	0.75	0.64	0.88	72	67446	15	6	4	5	41
ASE_00299	RNaseP_bact_a links to Rfam database...	0.56	0.52	0.61	52	49370	34	5	28	1	48
ASE_00313	RNaseP_nuc links to Rfam database...	0.59	0.45	0.77	40	62429	19	4	8	7	49
ASE_00316	RNaseP_nuc links to Rfam database...	0.50	0.33	0.78	32	107839	16	2	7	7	66
ASE_00318	RNaseP_bact_b links to Rfam database...	0.81	0.74	0.90	87	80103	25	2	8	15	31
ASE_00327	RNaseP_nuc links to Rfam database...	0.65	0.51	0.83	45	57237	17	2	7	8	44
ASE_00328	RNaseP_bact_b links to Rfam database...	0.87	0.83	0.90	93	72668	24	2	8	14	19
ASE_00330	RNaseP_nuc links to Rfam database...	0.68	0.54	0.84	49	56222	13	3	6	4	41
ASE_00332	RNaseP_bact_a links to Rfam database...	0.81	0.72	0.92	99	81702	14	4	5	5	39
ASE_00335	RNaseP_bact_b links to Rfam database...	0.85	0.79	0.90	92	75364	26	2	8	16	24
ASE_00337	RNaseP_nuc links to Rfam database...	0.66	0.56	0.77	40	39288	23	2	10	11	31
ASE_00338	RNaseP_nuc links to Rfam database...	0.59	0.43	0.81	42	66378	13	4	6	3	56
ASE_00339	RNaseP_bact_a links to Rfam database...	0.52	0.47	0.57	56	80101	45	15	28	2	63
ASE_00340	RNaseP_bact_a links to Rfam database...	0.80	0.73	0.89	62	45986	15	2	6	7	23
ASE_00342	RNaseP_bact_a links to Rfam database...	0.89	0.86	0.92	99	62373	14	4	5	5	16
ASE_00343	RNaseP_bact_a links to Rfam database...	0.31	0.27	0.36	31	83349	63	6	50	7	82
ASE_00346	RNaseP_arch links to Rfam database...	0.60	0.53	0.68	51	48130	29	3	21	5	46
ASE_00353	RNaseP_bact_a links to Rfam database...	0.77	0.68	0.88	73	57887	15	5	5	5	34
ASE_00359	RNaseP_arch links to Rfam database...	0.68	0.56	0.82	45	42723	15	3	7	5	35
ASE_00360	RNaseP_arch links to Rfam database...	0.78	0.72	0.84	47	29347	13	3	6	4	18
ASE_00361	RNaseP_bact_a links to Rfam database...	0.71	0.57	0.88	72	75384	15	4	6	5	55
ASE_00362	RNaseP_bact_a links to Rfam database...	0.84	0.79	0.89	72	48124	16	4	5	7	19
ASE_00363	RNaseP_bact_a links to Rfam database...	0.79	0.73	0.84	69	51278	18	3	10	5	25
ASE_00364	RNaseP_bact_a links to Rfam database...	0.74	0.66	0.84	69	54203	18	5	8	5	36
ASE_00366	RNaseP_bact_a links to Rfam database...	0.78	0.71	0.84	70	58570	18	6	7	5	28
ASE_00367	RNaseP_bact_a links to Rfam database...	0.87	0.85	0.89	73	42989	15	4	5	6	13
ASE_00369	RNaseP_bact_a links to Rfam database...	0.78	0.68	0.89	73	55863	15	4	5	6	34
ASE_00370	RNaseP_bact_a links to Rfam database...	0.85	0.83	0.88	70	41825	16	3	7	6	14
ASE_00372	RNaseP_bact_a links to Rfam database...	0.79	0.71	0.88	71	51922	16	4	6	6	29
ASE_00374	RNaseP_bact_a links to Rfam database...	0.85	0.81	0.89	71	44770	15	4	5	6	17
ASE_00375	RNaseP_bact_a links to Rfam database...	0.77	0.66	0.89	73	60296	15	3	6	6	37
ASE_00376	RNaseP_bact_a links to Rfam database...	0.76	0.68	0.87	71	56871	17	4	7	6	34
ASE_00377	RNaseP_bact_a links to Rfam database...	0.74	0.65	0.84	70	57547	18	5	8	5	37
ASE_00379	RNaseP_bact_a links to Rfam database...	0.85	0.81	0.89	72	45975	16	4	5	7	17
ASE_00380	RNaseP_bact_a links to Rfam database...	0.76	0.69	0.84	68	54865	18	4	9	5	31
ASE_00382	RNaseP_bact_a links to Rfam database...	0.87	0.86	0.89	72	41824	16	3	6	7	12
ASE_00383	RNaseP_bact_a links to Rfam database...	0.79	0.70	0.89	73	54533	15	4	5	6	32
ASE_00384	RNaseP_bact_a links to Rfam database...	0.82	0.77	0.87	71	48434	17	4	7	6	21
ASE_00385	RNaseP_bact_a links to Rfam database...	0.73	0.72	0.75	58	41828	24	4	15	5	23
ASE_00386	RNaseP_bact_a links to Rfam database...	0.82	0.76	0.89	73	50321	14	4	5	5	23
ASE_00387	RNaseP_bact_a links to Rfam database...	0.70	0.62	0.80	64	55865	21	3	13	5	40
ASE_00388	RNaseP_bact_a links to Rfam database...	0.82	0.78	0.86	69	45673	18	4	7	7	20
ASE_00390	RNaseP_bact_a links to Rfam database...	0.84	0.82	0.86	70	42114	17	3	8	6	15
ASE_00393	RNaseP_bact_a links to Rfam database...	0.77	0.72	0.82	67	47813	21	4	11	6	26
ASE_00394	RNaseP_bact_a links to Rfam database...	0.78	0.71	0.86	66	46894	15	3	8	4	27
ASE_00395	RNaseP_bact_a links to Rfam database...	0.87	0.86	0.89	72	41535	15	4	5	6	12
ASE_00396	RNaseP_bact_a links to Rfam database...	0.85	0.84	0.86	70	41535	16	5	6	5	13
ASE_00397	RNaseP_bact_a links to Rfam database...	0.79	0.70	0.89	73	54533	15	4	5	6	32
ASE_00398	RNaseP_bact_a links to Rfam database...	0.76	0.67	0.86	70	55864	17	4	7	6	34
ASE_00400	RNaseP_bact_a links to Rfam database...	0.78	0.69	0.89	73	57888	15	4	5	6	33
ASE_00401	RNaseP_bact_a links to Rfam database...	0.69	0.54	0.87	68	76950	16	5	5	6	58
ASE_00402	RNaseP_bact_a links to Rfam database...	0.87	0.86	0.89	73	42404	15	3	6	6	12
ASE_00403	RNaseP_bact_a links to Rfam database...	0.78	0.68	0.89	73	55863	15	4	5	6	34
ASE_00404	RNaseP_bact_a links to Rfam database...	0.86	0.84	0.89	71	42991	15	4	5	6	14
ASE_00406	RNaseP_bact_a links to Rfam database...	0.83	0.78	0.89	73	48746	14	4	5	5	21
ASE_00411	RNaseP_bact_a links to Rfam database...	0.70	0.69	0.72	61	49370	29	10	14	5	28
ASE_00412	RNaseP_bact_a links to Rfam database...	0.64	0.57	0.72	60	58228	28	7	16	5	45
ASE_00413	RNaseP_bact_a links to Rfam database...	0.80	0.79	0.81	64	44472	22	7	8	7	17
ASE_00414	RNaseP_bact_a links to Rfam database...	0.60	0.55	0.67	52	46282	27	8	18	1	43
ASE_00415	RNaseP_bact_a links to Rfam database...	0.58	0.50	0.68	52	54869	29	3	22	4	51
ASE_00416	RNaseP_bact_a links to Rfam database...	0.78	0.72	0.84	91	77313	22	6	11	5	36
ASE_00417	RNaseP_arch links to Rfam database...	0.77	0.68	0.87	68	54537	14	3	7	4	32
ASE_00418	RNaseP_arch links to Rfam database...	0.71	0.61	0.82	46	38725	14	3	7	4	29
ASE_00419	RNaseP_bact_a links to Rfam database...	0.74	0.66	0.83	68	54864	19	7	7	5	35
ASE_00422	RNaseP_bact_a links to Rfam database...	0.79	0.71	0.88	67	46895	13	1	8	4	27
ASE_00423	RNaseP_bact_a links to Rfam database...	0.79	0.76	0.81	83	56851	25	4	15	6	26
ASE_00426	RNaseP_bact_a links to Rfam database...	0.50	0.46	0.55	50	60984	42	9	32	1	58
ASE_00428	RNaseP_bact_a links to Rfam database...	0.78	0.73	0.84	91	76528	22	6	11	5	34
ASE_00430	RNaseP_bact_a links to Rfam database...	0.81	0.71	0.92	69	46896	11	2	4	5	28
ASE_00431	RNaseP_bact_a links to Rfam database...	0.58	0.55	0.62	52	46276	33	12	20	1	43
ASE_00434	RNaseP_bact_b links to Rfam database...	0.74	0.71	0.78	78	68165	36	2	20	14	32
ASE_00437	RNaseP_bact_a links to Rfam database...	0.60	0.53	0.68	72	79295	39	4	30	5	63
ASE_00438	RNaseP_bact_a links to Rfam database...	0.59	0.50	0.71	58	65984	27	5	19	3	58
ASE_00441	RNaseP_bact_a links to Rfam database...	0.69	0.57	0.84	64	64185	18	4	8	6	48
ASE_00447	RNaseP_bact_a links to Rfam database...	0.88	0.84	0.91	98	60270	15	4	6	5	18
ASE_00448	RNaseP_bact_a links to Rfam database...	0.86	0.84	0.88	94	64154	18	4	9	5	18
ASE_00451	RNaseP_bact_a links to Rfam database...	0.84	0.78	0.91	98	70768	15	4	6	5	27
CRW_00013	Intron_gpI links to Rfam database...	0.41	0.25	0.66	29	103696	18	0	15	3	86
CRW_00016	Intron_gpI links to Rfam database...	0.40	0.24	0.66	29	77377	17	0	15	2	91
CRW_00610	Intron_gpI links to Rfam database...	0.54	0.38	0.76	31	36274	12	1	9	2	50
CRW_00613	Intron_gpI links to Rfam database...	0.40	0.29	0.55	23	34938	22	1	18	3	55
CRW_00614	Intron_gpI links to Rfam database...	0.49	0.39	0.63	22	121736	16	2	11	3	35
CRW_00618	Intron_gpI links to Rfam database...	0.38	0.28	0.52	17	56247	16	2	14	0	44
CRW_00619	Intron_gpI links to Rfam database...	0.46	0.29	0.72	21	164996	11	1	7	3	52
CRW_00620	Intron_gpI links to Rfam database...	0.36	0.25	0.52	16	150944	27	0	15	12	47
CRW_00621	Intron_gpI links to Rfam database...	0.35	0.25	0.49	18	153144	20	3	16	1	53
CRW_00623	Intron_gpI links to Rfam database...	0.43	0.28	0.68	23	129761	14	2	9	3	60
CRW_00633	Intron_gpI links to Rfam database...	0.38	0.24	0.61	25	63505	16	2	14	0	81
CRW_00634	Intron_gpI links to Rfam database...	0.31	0.19	0.50	18	64584	24	1	17	6	76
CRW_00670	Intron_gpI links to Rfam database...	0.51	0.31	0.84	37	70081	8	0	7	1	83
CRW_00671	Intron_gpI links to Rfam database...	0.52	0.32	0.84	37	62791	8	0	7	1	80
CRW_00672	Intron_gpI links to Rfam database...	0.52	0.32	0.84	36	72347	10	0	7	3	75
CRW_00674	Intron_gpI links to Rfam database...	0.25	0.15	0.45	18	83396	25	6	16	3	106
CRW_00676	Intron_gpI links to Rfam database...	0.29	0.16	0.53	18	93494	24	0	16	8	97
CRW_00692	Intron_gpI links to Rfam database...	0.32	0.20	0.53	18	68601	24	0	16	8	72
PDB_00827	Intron_gpI links to Rfam database...	0.50	0.37	0.68	30	26984	14	2	12	0	51
PDB_00919	RNaseP_bact_a links to Rfam database...	0.39	0.34	0.44	35	44174	47	2	42	3	68
RFA_00597	Telomerase-vert links to Rfam database...	0.75	0.72	0.80	78	97805	27	2	18	7	31
RFA_00598	Telomerase-vert links to Rfam database...	0.71	0.67	0.75	68	84575	39	2	21	16	33
RFA_00599	Telomerase-vert links to Rfam database...	0.88	0.86	0.90	95	101370	21	3	7	11	16
RFA_00600	Telomerase-vert links to Rfam database...	0.81	0.76	0.86	76	120207	25	2	10	13	24
RFA_00601	Telomerase-vert links to Rfam database...	0.87	0.84	0.89	96	99127	25	3	9	13	18
RFA_00602	Telomerase-vert links to Rfam database...	0.82	0.77	0.87	89	101373	22	3	10	9	27
TMR_00007	tmRNA links to Rfam database...	0.69	0.58	0.83	63	61700	20	2	11	7	45
TMR_00008	tmRNA links to Rfam database...	0.71	0.59	0.84	63	65991	19	3	9	7	43
TMR_00010	tmRNA links to Rfam database...	0.58	0.50	0.68	48	57899	34	3	20	11	48
TMR_00012	tmRNA links to Rfam database...	0.54	0.49	0.60	40	64553	42	8	19	15	41
TMR_00014	tmRNA links to Rfam database...	0.65	0.53	0.81	58	68563	23	3	11	9	52
TMR_00017	tmRNA links to Rfam database...	0.72	0.62	0.84	63	67086	20	6	6	8	39
TMR_00018	tmRNA links to Rfam database...	0.65	0.59	0.72	54	64545	29	8	13	8	38
TMR_00028	tmRNA links to Rfam database...	0.61	0.54	0.69	52	62760	29	4	19	6	45
TMR_00030	tmRNA links to Rfam database...	0.55	0.45	0.68	50	75782	31	2	21	8	61
TMR_00034	tmRNA links to Rfam database...	0.62	0.51	0.77	56	59958	23	1	16	6	54
TMR_00035	tmRNA links to Rfam database...	0.65	0.56	0.76	55	67824	29	4	13	12	43
TMR_00036	tmRNA links to Rfam database...	0.60	0.50	0.74	50	90457	25	7	11	7	51
TMR_00038	tmRNA links to Rfam database...	0.64	0.52	0.79	57	71181	21	6	9	6	53
TMR_00042	tmRNA links to Rfam database...	0.68	0.60	0.78	59	62759	23	7	10	6	39
TMR_00046	tmRNA links to Rfam database...	0.47	0.42	0.53	40	62760	41	6	29	6	56
TMR_00047	tmRNA links to Rfam database...	0.32	0.28	0.36	16	48472	42	10	18	14	41
TMR_00048	tmRNA links to Rfam database...	0.68	0.61	0.76	58	64904	24	7	11	6	37
TMR_00049	tmRNA links to Rfam database...	0.61	0.56	0.67	49	63117	32	6	18	8	38
TMR_00051	tmRNA links to Rfam database...	0.73	0.64	0.85	60	65632	19	5	6	8	34
TMR_00055	tmRNA links to Rfam database...	0.56	0.44	0.71	50	78933	29	3	17	9	64
TMR_00057	tmRNA links to Rfam database...	0.53	0.46	0.61	36	73861	36	8	15	13	43
TMR_00061	tmRNA links to Rfam database...	0.67	0.58	0.78	57	59612	23	6	10	7	42
TMR_00062	tmRNA links to Rfam database...	0.62	0.52	0.75	54	78534	28	4	14	10	50
TMR_00064	tmRNA links to Rfam database...	0.61	0.51	0.73	53	76955	29	4	16	9	50
TMR_00065	tmRNA links to Rfam database...	0.65	0.53	0.79	56	76565	25	4	11	10	50
TMR_00067	tmRNA links to Rfam database...	0.71	0.57	0.89	65	82142	14	3	5	6	49
TMR_00073	tmRNA links to Rfam database...	0.55	0.44	0.70	51	65630	28	4	18	6	66
TMR_00076	tmRNA links to Rfam database...	0.59	0.50	0.70	50	70805	32	6	15	11	50
TMR_00080	tmRNA links to Rfam database...	0.55	0.49	0.63	47	70425	35	10	18	7	49
TMR_00081	tmRNA links to Rfam database...	0.58	0.47	0.70	50	67090	30	3	18	9	56
TMR_00082	tmRNA links to Rfam database...	0.59	0.51	0.68	49	67824	32	9	14	9	47
TMR_00083	tmRNA links to Rfam database...	0.63	0.52	0.75	55	68192	27	4	14	9	50
TMR_00092	tmRNA links to Rfam database...	0.63	0.55	0.73	56	67451	28	6	15	7	45
TMR_00093	tmRNA links to Rfam database...	0.67	0.55	0.81	56	64192	23	2	11	10	46
TMR_00096	tmRNA links to Rfam database...	0.55	0.46	0.66	46	64910	33	5	19	9	54
TMR_00101	tmRNA links to Rfam database...	0.71	0.58	0.86	62	64189	19	1	9	9	45
TMR_00102	tmRNA links to Rfam database...	0.61	0.51	0.71	52	64188	29	7	14	8	49
TMR_00103	tmRNA links to Rfam database...	0.68	0.57	0.82	62	64185	22	2	12	8	46
TMR_00106	tmRNA links to Rfam database...	0.58	0.46	0.72	55	90024	29	5	16	8	65
TMR_00109	tmRNA links to Rfam database...	0.60	0.47	0.76	57	88335	26	3	15	8	65
TMR_00111	tmRNA links to Rfam database...	0.60	0.47	0.76	57	90450	26	2	16	8	65
TMR_00116	tmRNA links to Rfam database...	0.76	0.65	0.89	68	64904	14	3	5	6	36
TMR_00117	tmRNA links to Rfam database...	0.57	0.46	0.72	54	80125	29	6	15	8	64
TMR_00118	tmRNA links to Rfam database...	0.50	0.39	0.64	47	81332	35	5	22	8	73
TMR_00119	tmRNA links to Rfam database...	0.60	0.51	0.72	53	71936	29	2	19	8	51
TMR_00123	tmRNA links to Rfam database...	0.72	0.61	0.84	62	66356	21	7	5	9	39
TMR_00124	tmRNA links to Rfam database...	0.65	0.53	0.80	52	70435	24	5	8	11	46
TMR_00125	tmRNA links to Rfam database...	0.67	0.59	0.77	58	64186	24	9	8	7	41
TMR_00127	tmRNA links to Rfam database...	0.62	0.54	0.71	52	62762	28	7	14	7	45
TMR_00128	tmRNA links to Rfam database...	0.64	0.57	0.71	55	60998	29	9	13	7	41
TMR_00131	tmRNA links to Rfam database...	0.66	0.57	0.77	56	64907	26	7	10	9	43
TMR_00135	tmRNA links to Rfam database...	0.67	0.59	0.77	58	62760	24	6	11	7	41
TMR_00136	tmRNA links to Rfam database...	0.56	0.48	0.67	48	74619	36	5	19	12	53
TMR_00137	tmRNA links to Rfam database...	0.63	0.56	0.71	50	61005	32	8	12	12	39
TMR_00139	tmRNA links to Rfam database...	0.67	0.59	0.75	54	62056	25	10	8	7	37
TMR_00140	tmRNA links to Rfam database...	0.68	0.57	0.81	57	73850	26	1	12	13	43
TMR_00142	tmRNA links to Rfam database...	0.63	0.54	0.74	55	70802	27	4	15	8	47
TMR_00143	tmRNA links to Rfam database...	0.66	0.57	0.77	59	64543	24	5	13	6	44
TMR_00144	tmRNA links to Rfam database...	0.50	0.43	0.59	44	74231	38	6	24	8	59
TMR_00146	tmRNA links to Rfam database...	0.62	0.57	0.67	24	32095	27	3	9	15	18
TMR_00150	tmRNA links to Rfam database...	0.56	0.52	0.59	22	43034	45	1	14	30	20
TMR_00152	tmRNA links to Rfam database...	0.64	0.50	0.81	58	81334	24	3	11	10	57
TMR_00155	tmRNA links to Rfam database...	0.70	0.58	0.86	60	61706	21	3	7	11	44
TMR_00156	tmRNA links to Rfam database...	0.56	0.48	0.64	47	60305	33	5	21	7	50
TMR_00158	tmRNA links to Rfam database...	0.58	0.49	0.68	49	60654	30	3	20	7	50
TMR_00159	tmRNA links to Rfam database...	0.57	0.51	0.63	47	62053	35	11	17	7	45
TMR_00160	tmRNA links to Rfam database...	0.69	0.59	0.81	56	64551	21	2	11	8	39
TMR_00164	tmRNA links to Rfam database...	0.70	0.58	0.84	62	66721	21	6	6	9	44
TMR_00165	tmRNA links to Rfam database...	0.67	0.58	0.78	56	61704	25	6	10	9	41
TMR_00166	tmRNA links to Rfam database...	0.65	0.54	0.77	55	61705	25	1	15	9	46
TMR_00168	tmRNA links to Rfam database...	0.70	0.57	0.86	65	60999	17	1	10	6	49
TMR_00173	tmRNA links to Rfam database...	0.37	0.31	0.45	13	42166	39	2	14	23	29
TMR_00179	tmRNA links to Rfam database...	0.74	0.65	0.83	64	67084	20	6	7	7	34
TMR_00180	tmRNA links to Rfam database...	0.73	0.65	0.83	64	67084	20	6	7	7	35
TMR_00182	tmRNA links to Rfam database...	0.54	0.44	0.65	45	66361	33	8	16	9	57
TMR_00183	tmRNA links to Rfam database...	0.62	0.52	0.74	54	63117	27	4	15	8	49
TMR_00184	tmRNA links to Rfam database...	0.58	0.49	0.69	50	63118	29	10	12	7	52
TMR_00193	tmRNA links to Rfam database...	0.56	0.51	0.62	41	59274	38	9	16	13	39
TMR_00194	tmRNA links to Rfam database...	0.57	0.51	0.64	47	62762	35	4	22	9	46
TMR_00196	tmRNA links to Rfam database...	0.65	0.56	0.76	54	61004	29	7	10	12	43
TMR_00199	tmRNA links to Rfam database...	0.54	0.49	0.60	45	62760	37	13	17	7	47
TMR_00204	tmRNA links to Rfam database...	0.59	0.49	0.72	48	60311	30	4	15	11	49
TMR_00207	tmRNA links to Rfam database...	0.68	0.57	0.80	59	72316	24	7	8	9	44
TMR_00223	tmRNA links to Rfam database...	0.60	0.53	0.69	50	64189	32	7	15	10	45
TMR_00224	tmRNA links to Rfam database...	0.65	0.56	0.75	57	64904	27	6	13	8	44
TMR_00226	tmRNA links to Rfam database...	0.67	0.55	0.82	58	69680	22	4	9	9	47
TMR_00227	tmRNA links to Rfam database...	0.65	0.55	0.77	56	70052	26	7	10	9	45
TMR_00228	tmRNA links to Rfam database...	0.57	0.46	0.70	50	88339	30	6	15	9	58
TMR_00234	tmRNA links to Rfam database...	0.69	0.58	0.83	59	58925	18	4	8	6	43
TMR_00238	tmRNA links to Rfam database...	0.40	0.35	0.47	35	84591	47	6	34	7	66
TMR_00239	tmRNA links to Rfam database...	0.67	0.59	0.75	57	61700	25	8	11	6	39
TMR_00240	tmRNA links to Rfam database...	0.53	0.49	0.57	42	63116	42	9	23	10	43
TMR_00248	tmRNA links to Rfam database...	0.58	0.55	0.62	21	54251	45	1	12	32	17
TMR_00257	tmRNA links to Rfam database...	0.72	0.62	0.82	61	67087	22	7	6	9	37
TMR_00259	tmRNA links to Rfam database...	0.62	0.51	0.76	53	67826	26	5	12	9	50
TMR_00261	tmRNA links to Rfam database...	0.56	0.47	0.68	47	66726	32	8	14	10	54
TMR_00262	tmRNA links to Rfam database...	0.51	0.42	0.61	44	74233	37	4	24	9	60
TMR_00271	tmRNA links to Rfam database...	0.62	0.54	0.71	49	64192	32	7	13	12	42
TMR_00274	tmRNA links to Rfam database...	0.67	0.55	0.82	58	66724	22	2	11	9	47
TMR_00278	tmRNA links to Rfam database...	0.70	0.61	0.82	62	67820	21	4	10	7	40
TMR_00279	tmRNA links to Rfam database...	0.68	0.60	0.78	56	68934	24	6	10	8	38
TMR_00280	tmRNA links to Rfam database...	0.69	0.60	0.78	61	65988	23	4	13	6	40
TMR_00283	tmRNA links to Rfam database...	0.74	0.65	0.84	62	65267	20	7	5	8	34
TMR_00289	tmRNA links to Rfam database...	0.64	0.56	0.73	55	67086	28	4	16	8	43
TMR_00290	tmRNA links to Rfam database...	0.59	0.50	0.70	46	64195	30	3	17	10	46
TMR_00296	tmRNA links to Rfam database...	0.62	0.54	0.71	53	68931	31	5	17	9	45
TMR_00298	tmRNA links to Rfam database...	0.65	0.57	0.74	58	68187	26	4	16	6	43
TMR_00300	tmRNA links to Rfam database...	0.70	0.57	0.86	64	70426	18	5	5	8	48
TMR_00301	tmRNA links to Rfam database...	0.66	0.56	0.77	54	82145	25	7	9	9	42
TMR_00302	tmRNA links to Rfam database...	0.62	0.54	0.72	51	77350	31	9	11	11	43
TMR_00305	tmRNA links to Rfam database...	0.67	0.57	0.78	58	61001	24	5	11	8	44
TMR_00306	tmRNA links to Rfam database...	0.59	0.51	0.69	54	64183	29	6	18	5	52
TMR_00310	tmRNA links to Rfam database...	0.74	0.64	0.86	63	63830	17	3	7	7	35
TMR_00317	tmRNA links to Rfam database...	0.69	0.59	0.80	60	68190	23	5	10	8	42
TMR_00331	tmRNA links to Rfam database...	0.54	0.51	0.57	42	66721	36	14	18	4	40
TMR_00332	tmRNA links to Rfam database...	0.69	0.60	0.80	59	67087	25	6	9	10	40
TMR_00334	tmRNA links to Rfam database...	0.72	0.61	0.84	62	66721	20	3	9	8	39
TMR_00337	tmRNA links to Rfam database...	0.48	0.38	0.61	45	82954	34	4	25	5	74
TMR_00340	tmRNA links to Rfam database...	0.37	0.33	0.42	27	64197	51	3	34	14	54
TMR_00341	tmRNA links to Rfam database...	0.54	0.48	0.61	44	63118	35	8	20	7	48
TMR_00343	tmRNA links to Rfam database...	0.67	0.57	0.79	60	64904	22	4	12	6	45
TMR_00345	tmRNA links to Rfam database...	0.61	0.53	0.71	55	63826	28	3	19	6	49
TMR_00346	tmRNA links to Rfam database...	0.51	0.44	0.59	41	64192	36	3	25	8	53
TMR_00348	tmRNA links to Rfam database...	0.47	0.39	0.57	39	77352	38	1	29	8	60
TMR_00352	tmRNA links to Rfam database...	0.48	0.40	0.59	30	95215	46	6	15	25	45
TMR_00353	tmRNA links to Rfam database...	0.42	0.35	0.51	37	84182	42	6	30	6	68
TMR_00357	tmRNA links to Rfam database...	0.52	0.45	0.60	41	82960	33	9	18	6	51
TMR_00358	tmRNA links to Rfam database...	0.66	0.56	0.77	55	75007	23	5	11	7	44
TMR_00366	tmRNA links to Rfam database...	0.63	0.54	0.74	54	67823	28	3	16	9	46
TMR_00372	tmRNA links to Rfam database...	0.68	0.56	0.83	54	70435	18	3	8	7	42
TMR_00374	tmRNA links to Rfam database...	0.60	0.52	0.69	48	81740	32	5	17	10	44
TMR_00375	tmRNA links to Rfam database...	0.71	0.59	0.84	58	73467	19	3	8	8	40
TMR_00376	tmRNA links to Rfam database...	0.63	0.54	0.73	51	74621	28	4	15	9	44
TMR_00378	tmRNA links to Rfam database...	0.65	0.55	0.77	53	67827	26	3	13	10	44
TMR_00383	tmRNA links to Rfam database...	0.54	0.47	0.63	47	66720	36	6	22	8	53
TMR_00384	tmRNA links to Rfam database...	0.70	0.57	0.85	62	65630	17	4	7	6	46
TMR_00393	tmRNA links to Rfam database...	0.50	0.45	0.55	24	53257	40	3	17	20	29
TMR_00395	tmRNA links to Rfam database...	0.72	0.60	0.88	65	64546	15	4	5	6	44
TMR_00398	tmRNA links to Rfam database...	0.71	0.59	0.85	63	65267	17	6	5	6	43
TMR_00399	tmRNA links to Rfam database...	0.66	0.59	0.74	55	64906	26	9	10	7	39
TMR_00404	tmRNA links to Rfam database...	0.58	0.51	0.66	47	67457	35	6	18	11	45
TMR_00408	tmRNA links to Rfam database...	0.64	0.58	0.70	51	65993	28	11	11	6	37
TMR_00409	tmRNA links to Rfam database...	0.75	0.65	0.86	30	68600	41	1	4	36	16
TMR_00411	tmRNA links to Rfam database...	0.65	0.59	0.73	51	61005	25	10	9	6	36
TMR_00415	tmRNA links to Rfam database...	0.62	0.53	0.72	54	67086	29	3	18	8	47
TMR_00419	tmRNA links to Rfam database...	0.57	0.46	0.70	51	81737	29	1	21	7	60
TMR_00422	tmRNA links to Rfam database...	0.71	0.64	0.79	59	67821	24	7	9	8	33
TMR_00423	tmRNA links to Rfam database...	0.48	0.47	0.50	34	63835	46	10	24	12	39
TMR_00427	tmRNA links to Rfam database...	0.68	0.60	0.76	58	67452	26	11	7	8	39
TMR_00429	tmRNA links to Rfam database...	0.68	0.55	0.85	60	74620	18	6	5	7	49
TMR_00430	tmRNA links to Rfam database...	0.58	0.47	0.71	51	82549	32	7	14	11	58
TMR_00431	tmRNA links to Rfam database...	0.35	0.31	0.40	17	51961	47	2	23	22	38
TMR_00432	tmRNA links to Rfam database...	0.54	0.45	0.65	47	79728	34	4	21	9	57
TMR_00433	tmRNA links to Rfam database...	0.60	0.50	0.72	53	80126	30	6	15	9	53
TMR_00439	tmRNA links to Rfam database...	0.71	0.59	0.85	60	68564	21	2	9	10	41
TMR_00441	tmRNA links to Rfam database...	0.51	0.43	0.59	36	62067	35	4	21	10	47
TMR_00443	tmRNA links to Rfam database...	0.72	0.62	0.84	64	67085	19	6	6	7	40
TMR_00448	tmRNA links to Rfam database...	0.68	0.60	0.77	55	62057	24	8	8	8	37
TMR_00451	tmRNA links to Rfam database...	0.56	0.51	0.63	45	63474	37	13	14	10	44
TMR_00457	tmRNA links to Rfam database...	0.58	0.48	0.70	49	78536	30	6	15	9	53
TMR_00458	tmRNA links to Rfam database...	0.66	0.58	0.75	54	63474	29	8	10	11	39
TMR_00460	tmRNA links to Rfam database...	0.60	0.49	0.73	52	79330	28	6	13	9	54
TMR_00465	tmRNA links to Rfam database...	0.62	0.54	0.72	51	64190	28	5	15	8	43
TMR_00469	tmRNA links to Rfam database...	0.71	0.61	0.84	61	64547	20	6	6	8	39
TMR_00472	tmRNA links to Rfam database...	0.68	0.59	0.79	57	64548	23	7	8	8	40
TMR_00478	tmRNA links to Rfam database...	0.38	0.32	0.44	32	71937	47	5	36	6	67
TMR_00498	tmRNA links to Rfam database...	0.67	0.58	0.78	57	68933	23	7	9	7	42
TMR_00499	tmRNA links to Rfam database...	0.44	0.38	0.51	38	64545	43	1	36	6	61
TMR_00501	tmRNA links to Rfam database...	0.51	0.45	0.58	41	62410	40	6	24	10	51
TMR_00502	tmRNA links to Rfam database...	0.50	0.44	0.57	41	75394	40	11	20	9	52
TMR_00503	tmRNA links to Rfam database...	0.73	0.60	0.88	67	67820	16	3	6	7	44
TMR_00519	tmRNA links to Rfam database...	0.64	0.57	0.72	54	63115	29	9	12	8	41
TMR_00520	tmRNA links to Rfam database...	0.68	0.60	0.79	59	63115	25	7	9	9	40
TMR_00522	tmRNA links to Rfam database...	0.65	0.56	0.75	54	63118	28	6	12	10	43
TMR_00528	tmRNA links to Rfam database...	0.64	0.56	0.74	54	63117	28	6	13	9	43
TMR_00540	tmRNA links to Rfam database...	0.65	0.56	0.75	58	73459	25	9	10	6	46
TMR_00541	tmRNA links to Rfam database...	0.70	0.59	0.83	62	61701	21	8	5	8	43
TMR_00544	tmRNA links to Rfam database...	0.55	0.45	0.66	49	89602	31	3	22	6	59
TMR_00547	tmRNA links to Rfam database...	0.70	0.60	0.81	60	65267	22	4	10	8	40
TMR_00553	tmRNA links to Rfam database...	0.63	0.49	0.82	40	48156	19	3	6	10	41
TMR_00559	tmRNA links to Rfam database...	0.67	0.56	0.79	57	62409	23	5	10	8	44
TMR_00560	tmRNA links to Rfam database...	0.75	0.62	0.91	61	61008	16	2	4	10	37
TMR_00562	tmRNA links to Rfam database...	0.72	0.58	0.91	59	72706	19	1	5	13	43
TMR_00563	tmRNA links to Rfam database...	0.74	0.60	0.91	62	75398	18	1	5	12	41
TMR_00566	tmRNA links to Rfam database...	0.71	0.61	0.84	61	60653	21	2	10	9	39
TMR_00568	tmRNA links to Rfam database...	0.76	0.65	0.89	64	60654	17	1	7	9	35
TMR_00570	tmRNA links to Rfam database...	0.80	0.69	0.92	67	60305	15	2	4	9	30
TMR_00571	tmRNA links to Rfam database...	0.78	0.67	0.92	66	60654	16	1	5	10	33
TMR_00576	tmRNA links to Rfam database...	0.78	0.67	0.92	68	60304	14	2	4	8	34
TMR_00579	tmRNA links to Rfam database...	0.33	0.29	0.39	26	80534	43	12	29	2	64
TMR_00580	tmRNA links to Rfam database...	0.74	0.61	0.90	61	60658	17	2	5	10	39
TMR_00581	tmRNA links to Rfam database...	0.74	0.63	0.87	62	62410	19	3	6	10	36
TMR_00584	tmRNA links to Rfam database...	0.77	0.65	0.91	63	61006	14	2	4	8	34
TMR_00586	tmRNA links to Rfam database...	0.74	0.64	0.85	62	61002	19	5	6	8	35
TMR_00587	tmRNA links to Rfam database...	0.70	0.61	0.81	61	61350	22	5	9	8	39
TMR_00588	tmRNA links to Rfam database...	0.45	0.37	0.54	37	77353	41	5	26	10	64
TMR_00594	tmRNA links to Rfam database...	0.53	0.43	0.65	45	79332	33	3	21	9	59
TMR_00596	tmRNA links to Rfam database...	0.53	0.43	0.64	41	78146	36	8	15	13	54
TMR_00599	tmRNA links to Rfam database...	0.42	0.42	0.42	30	63119	53	15	26	12	42
TMR_00600	tmRNA links to Rfam database...	0.57	0.46	0.72	53	79726	29	6	15	8	62
TMR_00601	tmRNA links to Rfam database...	0.65	0.62	0.68	26	58958	50	2	10	38	16
TMR_00603	tmRNA links to Rfam database...	0.72	0.67	0.76	29	60340	43	2	7	34	14
TMR_00604	tmRNA links to Rfam database...	0.72	0.60	0.87	67	62758	15	3	7	5	45
TMR_00605	tmRNA links to Rfam database...	0.57	0.43	0.77	46	74245	24	2	12	10	62
TMR_00606	tmRNA links to Rfam database...	0.69	0.57	0.85	61	68934	19	4	7	8	46
TMR_00609	tmRNA links to Rfam database...	0.61	0.50	0.75	57	63470	26	1	18	7	56
TMR_00610	tmRNA links to Rfam database...	0.70	0.60	0.82	62	62052	21	2	12	7	42
TMR_00611	tmRNA links to Rfam database...	0.68	0.60	0.78	61	61347	23	4	13	6	41
TMR_00612	tmRNA links to Rfam database...	0.76	0.65	0.88	68	60649	15	4	5	6	36
TMR_00614	tmRNA links to Rfam database...	0.67	0.56	0.82	58	61004	21	1	12	8	46
TMR_00615	tmRNA links to Rfam database...	0.63	0.55	0.73	53	63830	27	8	12	7	43
TMR_00616	tmRNA links to Rfam database...	0.65	0.56	0.75	55	67088	24	8	10	6	44
TMR_00617	tmRNA links to Rfam database...	0.56	0.52	0.60	30	34666	27	5	15	7	28
TMR_00623	tmRNA links to Rfam database...	0.71	0.57	0.87	62	61354	20	1	8	11	46
TMR_00624	tmRNA links to Rfam database...	0.73	0.60	0.88	65	62407	17	4	5	8	43
TMR_00625	tmRNA links to Rfam database...	0.53	0.42	0.65	45	78934	34	5	19	10	61
TMR_00626	tmRNA links to Rfam database...	0.54	0.44	0.66	48	67823	35	2	23	10	61
TMR_00680	tmRNA links to Rfam database...	0.47	0.40	0.54	40	67822	43	2	32	9	59
TMR_00681	tmRNA links to Rfam database...	0.63	0.55	0.74	53	65994	25	5	14	6	44
TMR_00683	tmRNA links to Rfam database...	0.59	0.50	0.70	50	82957	30	4	17	9	50
TMR_00686	tmRNA links to Rfam database...	0.64	0.52	0.79	56	71182	23	3	12	8	52
TMR_00687	tmRNA links to Rfam database...	0.69	0.56	0.86	62	71559	16	3	7	6	49
TMR_00696	tmRNA links to Rfam database...	0.56	0.44	0.70	50	85007	29	1	20	8	64
TMR_00698	tmRNA links to Rfam database...	0.57	0.48	0.68	50	63117	28	7	16	5	54
TMR_00699	tmRNA links to Rfam database...	0.68	0.58	0.80	59	67087	23	6	9	8	43
TMR_00702	tmRNA links to Rfam database...	0.64	0.55	0.74	55	67087	27	3	16	8	45
TMR_00703	tmRNA links to Rfam database...	0.68	0.60	0.79	59	67453	23	7	9	7	40
TMR_00706	tmRNA links to Rfam database...	0.61	0.50	0.76	51	66363	26	5	11	10	52
TMR_00711	tmRNA links to Rfam database...	0.63	0.55	0.71	54	67820	29	11	11	7	44
TMR_00712	tmRNA links to Rfam database...	0.60	0.50	0.72	54	78531	28	4	17	7	55
TMR_00716	tmRNA links to Rfam database...	0.61	0.50	0.74	50	62767	27	5	13	9	50

^top

Performance of Contrafold - scored lower in this pairwise comparison

1. Total counts & total scores for Contrafold

Total Base Pair Counts
Total TP	27687
Total TN	33003880
Total FP	25540
Total FP CONTRA	3750
Total FP INCONS	17241
Total FP COMP	4549
Total FN	23893

Total Scores
MCC	0.552
Average MCC ± 95% Confidence Intervals	0.548 ± 0.014
Sensitivity	0.537
Positive Predictive Value	0.569
Nr of predictions	508

^top

2. Individual counts for Contrafold [ download as .csv ]

RNA Chain	Rfam family	MCC	SENS	PPV	TP	TN	FP	FP CONTRA	FP INCONS	FP COMP	FN
ASE_00001	RNaseP_arch links to Rfam database...	0.80	0.77	0.83	58	34121	21	3	9	9	17
ASE_00002	RNaseP_arch links to Rfam database...	0.59	0.56	0.61	41	35444	30	2	24	4	32
ASE_00004	RNaseP_bact_a links to Rfam database...	0.70	0.68	0.72	66	47803	28	5	21	2	31
ASE_00005	RNaseP_bact_a links to Rfam database...	0.62	0.56	0.69	65	57876	30	0	29	1	52
ASE_00006	RNaseP_bact_a links to Rfam database...	0.52	0.52	0.53	48	47495	47	7	36	4	45
ASE_00007	RNaseP_bact_a links to Rfam database...	0.53	0.49	0.57	54	59591	45	1	39	5	56
ASE_00009	RNaseP_arch links to Rfam database...	0.66	0.64	0.68	43	26043	23	1	19	3	24
ASE_00012	RNaseP_bact_a links to Rfam database...	0.54	0.50	0.58	61	73815	53	2	42	9	62
ASE_00014	RNaseP_arch links to Rfam database...	0.53	0.53	0.53	56	54179	54	6	44	4	50
ASE_00017	RNaseP_nuc links to Rfam database...	0.12	0.14	0.11	9	50957	94	18	56	20	55
ASE_00018	RNaseP_bact_a links to Rfam database...	0.62	0.59	0.66	79	80481	42	2	39	1	55
ASE_00020	RNaseP_bact_a links to Rfam database...	0.68	0.62	0.74	78	73815	31	1	26	4	48
ASE_00021	RNaseP_bact_a links to Rfam database...	0.65	0.61	0.69	97	104056	50	3	40	7	63
ASE_00022	RNaseP_bact_b links to Rfam database...	0.33	0.31	0.35	39	82918	77	2	69	6	85
ASE_00023	RNaseP_bact_a links to Rfam database...	0.68	0.68	0.68	86	84129	45	4	36	5	41
ASE_00025	RNaseP_nuc links to Rfam database...	0.35	0.38	0.32	27	78521	109	13	45	51	44
ASE_00026	RNaseP_bact_a links to Rfam database...	0.55	0.52	0.59	57	59589	44	3	36	5	53
ASE_00028	RNaseP_bact_b links to Rfam database...	0.69	0.66	0.72	83	84551	44	4	28	12	43
ASE_00029	RNaseP_bact_a links to Rfam database...	0.64	0.61	0.68	75	82917	40	7	29	4	47
ASE_00030	RNaseP_bact_a links to Rfam database...	0.72	0.66	0.77	96	85367	30	4	24	2	49
ASE_00031	RNaseP_bact_a links to Rfam database...	0.58	0.56	0.61	70	86622	51	2	42	7	56
ASE_00032	RNaseP_bact_a links to Rfam database...	0.55	0.52	0.59	61	80097	47	3	39	5	57
ASE_00033	RNaseP_bact_a links to Rfam database...	0.52	0.46	0.60	56	64886	41	1	37	3	65
ASE_00035	RNaseP_bact_a links to Rfam database...	0.40	0.36	0.43	43	70401	62	4	52	6	75
ASE_00036	RNaseP_bact_a links to Rfam database...	0.62	0.58	0.67	76	75742	43	7	30	6	56
ASE_00037	RNaseP_bact_a links to Rfam database...	0.60	0.53	0.69	58	59256	28	1	25	2	52
ASE_00038	RNaseP_bact_a links to Rfam database...	0.54	0.50	0.58	51	53540	41	6	31	4	50
ASE_00040	RNaseP_bact_a links to Rfam database...	0.14	0.14	0.15	19	78875	114	8	101	5	114
ASE_00041	RNaseP_bact_a links to Rfam database...	0.67	0.61	0.73	66	57539	29	2	23	4	42
ASE_00042	RNaseP_bact_a links to Rfam database...	0.57	0.54	0.60	79	89969	57	2	50	5	66
ASE_00044	RNaseP_bact_a links to Rfam database...	0.68	0.67	0.69	70	54513	37	5	27	5	35
ASE_00046	RNaseP_bact_a links to Rfam database...	0.64	0.55	0.73	57	50325	23	1	20	2	46
ASE_00047	RNaseP_bact_a links to Rfam database...	0.56	0.50	0.62	65	74200	42	1	39	2	65
ASE_00052	RNaseP_bact_a links to Rfam database...	0.63	0.55	0.71	62	61338	29	0	25	4	50
ASE_00053	RNaseP_bact_a links to Rfam database...	0.69	0.65	0.72	87	79280	39	10	24	5	46
ASE_00057	RNaseP_bact_a links to Rfam database...	0.69	0.66	0.72	89	82091	41	9	26	6	45
ASE_00064	RNaseP_bact_a links to Rfam database...	0.60	0.56	0.65	50	45374	37	2	25	10	39
ASE_00066	RNaseP_bact_a links to Rfam database...	0.62	0.58	0.66	75	72276	39	3	36	0	55
ASE_00068	RNaseP_bact_a links to Rfam database...	0.69	0.61	0.79	52	37609	14	1	13	0	33
ASE_00069	RNaseP_bact_a links to Rfam database...	0.63	0.59	0.67	83	82905	45	4	36	5	57
ASE_00074	RNaseP_bact_a links to Rfam database...	0.49	0.49	0.50	58	67781	59	7	50	2	61
ASE_00075	RNaseP_bact_a links to Rfam database...	0.74	0.69	0.80	111	108673	34	3	24	7	51
ASE_00076	RNaseP_bact_a links to Rfam database...	0.47	0.44	0.50	52	68160	56	4	49	3	66
ASE_00077	RNaseP_bact_a links to Rfam database...	0.73	0.67	0.78	58	45076	22	3	13	6	28
ASE_00078	RNaseP_bact_a links to Rfam database...	0.73	0.66	0.81	55	43003	20	0	13	7	28
ASE_00079	RNaseP_bact_a links to Rfam database...	0.56	0.53	0.60	53	55522	39	3	33	3	47
ASE_00080	RNaseP_bact_a links to Rfam database...	0.59	0.57	0.61	70	71517	49	6	38	5	53
ASE_00081	RNaseP_bact_a links to Rfam database...	0.61	0.58	0.64	56	49682	34	5	27	2	41
ASE_00082	RNaseP_bact_a links to Rfam database...	0.79	0.72	0.87	83	70405	24	1	11	12	33
ASE_00083	RNaseP_bact_a links to Rfam database...	0.76	0.71	0.81	78	62385	25	0	18	7	32
ASE_00084	RNaseP_bact_a links to Rfam database...	0.74	0.73	0.76	72	53533	30	2	21	7	27
ASE_00087	RNaseP_bact_a links to Rfam database...	0.74	0.72	0.76	103	88275	33	4	28	1	41
ASE_00090	RNaseP_bact_a links to Rfam database...	0.67	0.67	0.66	68	55508	43	4	31	8	33
ASE_00092	RNaseP_bact_a links to Rfam database...	0.82	0.80	0.85	90	63440	23	6	10	7	23
ASE_00096	RNaseP_bact_a links to Rfam database...	0.70	0.62	0.80	71	63457	20	0	18	2	44
ASE_00099	RNaseP_bact_a links to Rfam database...	0.53	0.51	0.55	61	64510	51	5	44	2	59
ASE_00100	RNaseP_nuc links to Rfam database...	0.26	0.28	0.24	21	82127	115	15	52	48	55
ASE_00102	RNaseP_bact_a links to Rfam database...	0.46	0.43	0.50	72	117711	76	7	65	4	94
ASE_00104	RNaseP_bact_a links to Rfam database...	0.71	0.69	0.73	82	64148	33	4	27	2	37
ASE_00105	RNaseP_bact_a links to Rfam database...	0.53	0.50	0.57	55	64165	49	7	34	8	56
ASE_00107	RNaseP_bact_a links to Rfam database...	0.69	0.68	0.70	86	73030	38	4	33	1	41
ASE_00108	RNaseP_nuc links to Rfam database...	0.49	0.51	0.48	32	46904	72	10	25	37	31
ASE_00111	RNaseP_nuc links to Rfam database...	0.18	0.21	0.15	12	50008	84	20	46	18	45
ASE_00112	RNaseP_bact_a links to Rfam database...	0.76	0.72	0.81	83	75364	29	4	15	10	33
ASE_00115	RNaseP_bact_a links to Rfam database...	0.69	0.69	0.69	70	54513	40	6	26	8	31
ASE_00116	RNaseP_arch links to Rfam database...	0.46	0.42	0.50	28	31570	31	0	28	3	38
ASE_00118	RNaseP_bact_a links to Rfam database...	0.64	0.62	0.66	63	60631	35	4	28	3	39
ASE_00119	RNaseP_bact_a links to Rfam database...	0.73	0.72	0.74	78	62729	31	3	25	3	30
ASE_00120	RNaseP_arch links to Rfam database...	0.60	0.57	0.64	54	46886	31	6	25	0	40
ASE_00121	RNaseP_arch links to Rfam database...	0.28	0.27	0.29	25	45063	64	6	56	2	67
ASE_00122	RNaseP_bact_a links to Rfam database...	0.68	0.65	0.71	57	43285	25	1	22	2	31
ASE_00123	RNaseP_bact_a links to Rfam database...	0.57	0.54	0.61	46	38427	34	4	26	4	39
ASE_00125	RNaseP_bact_a links to Rfam database...	0.76	0.70	0.82	62	39264	22	3	11	8	26
ASE_00126	RNaseP_bact_a links to Rfam database...	0.61	0.59	0.64	48	40395	34	2	25	7	34
ASE_00128	RNaseP_bact_a links to Rfam database...	0.79	0.72	0.88	72	53219	16	1	9	6	28
ASE_00129	RNaseP_bact_a links to Rfam database...	0.70	0.66	0.74	73	62737	30	1	24	5	38
ASE_00131	RNaseP_bact_a links to Rfam database...	0.71	0.65	0.79	55	39270	25	1	14	10	30
ASE_00132	RNaseP_bact_a links to Rfam database...	0.57	0.48	0.67	46	50334	25	2	21	2	49
ASE_00134	RNaseP_bact_a links to Rfam database...	0.43	0.41	0.46	39	50318	50	3	43	4	56
ASE_00135	RNaseP_bact_a links to Rfam database...	0.63	0.57	0.69	62	63100	35	1	27	7	47
ASE_00136	RNaseP_bact_a links to Rfam database...	0.60	0.54	0.66	50	48129	37	1	25	11	42
ASE_00137	RNaseP_bact_a links to Rfam database...	0.79	0.76	0.82	74	48426	20	4	12	4	24
ASE_00138	RNaseP_bact_a links to Rfam database...	0.59	0.56	0.63	45	40399	27	7	19	1	36
ASE_00139	RNaseP_bact_a links to Rfam database...	0.66	0.59	0.74	61	54203	25	0	21	4	43
ASE_00140	RNaseP_bact_a links to Rfam database...	0.76	0.70	0.83	88	70770	19	3	15	1	37
ASE_00142	RNaseP_bact_a links to Rfam database...	0.60	0.59	0.62	72	67045	50	5	39	6	50
ASE_00145	RNaseP_arch links to Rfam database...	0.60	0.59	0.60	66	70015	50	7	37	6	45
ASE_00146	RNaseP_bact_a links to Rfam database...	0.50	0.48	0.53	60	70762	55	7	47	1	64
ASE_00148	RNaseP_arch links to Rfam database...	0.79	0.78	0.81	120	112426	34	5	24	5	34
ASE_00151	RNaseP_bact_a links to Rfam database...	0.46	0.45	0.47	44	51909	52	11	39	2	54
ASE_00153	RNaseP_nuc links to Rfam database...	0.41	0.42	0.40	31	57553	80	7	39	34	42
ASE_00154	RNaseP_arch links to Rfam database...	0.74	0.72	0.76	77	65240	31	2	22	7	30
ASE_00155	RNaseP_arch links to Rfam database...	0.60	0.58	0.61	83	93392	56	4	49	3	59
ASE_00163	RNaseP_bact_a links to Rfam database...	0.34	0.32	0.37	30	53219	62	4	48	10	63
ASE_00165	RNaseP_bact_a links to Rfam database...	0.71	0.66	0.77	67	52888	21	4	16	1	34
ASE_00168	RNaseP_nuc links to Rfam database...	0.32	0.38	0.27	24	60636	84	21	45	18	40
ASE_00169	RNaseP_bact_a links to Rfam database...	0.54	0.50	0.58	53	57200	43	1	37	5	54
ASE_00170	RNaseP_bact_a links to Rfam database...	0.65	0.61	0.70	57	48746	26	4	21	1	36
ASE_00171	RNaseP_bact_a links to Rfam database...	0.74	0.71	0.77	67	48429	24	5	15	4	27
ASE_00172	RNaseP_bact_a links to Rfam database...	0.83	0.77	0.88	82	58903	15	2	9	4	24
ASE_00174	RNaseP_bact_a links to Rfam database...	0.62	0.58	0.66	63	60979	34	7	26	1	46
ASE_00175	RNaseP_bact_a links to Rfam database...	0.35	0.34	0.36	36	59932	73	3	60	10	71
ASE_00176	RNaseP_bact_a links to Rfam database...	0.56	0.51	0.62	56	59941	40	4	30	6	54
ASE_00179	RNaseP_bact_a links to Rfam database...	0.75	0.69	0.81	58	44181	21	3	11	7	26
ASE_00180	RNaseP_bact_a links to Rfam database...	0.77	0.71	0.85	71	51276	18	4	9	5	29
ASE_00181	RNaseP_bact_a links to Rfam database...	0.44	0.42	0.46	45	57532	55	5	48	2	61
ASE_00182	RNaseP_bact_a links to Rfam database...	0.66	0.63	0.70	86	84132	38	2	35	1	50
ASE_00183	RNaseP_bact_a links to Rfam database...	0.71	0.70	0.72	79	61315	40	2	29	9	34
ASE_00184	RNaseP_bact_a links to Rfam database...	0.76	0.77	0.75	79	54509	30	5	22	3	23
ASE_00185	RNaseP_bact_a links to Rfam database...	0.74	0.69	0.80	88	73426	28	2	20	6	40
ASE_00186	RNaseP_bact_a links to Rfam database...	0.75	0.72	0.79	95	78882	35	3	23	9	37
ASE_00187	RNaseP_arch links to Rfam database...	0.38	0.37	0.40	42	68531	68	5	57	6	73
ASE_00189	RNaseP_bact_b links to Rfam database...	0.59	0.53	0.66	54	63108	35	0	28	7	48
ASE_00190	RNaseP_bact_b links to Rfam database...	0.53	0.46	0.61	41	45384	33	3	23	7	49
ASE_00192	RNaseP_bact_b links to Rfam database...	0.65	0.61	0.70	81	84551	40	5	29	6	52
ASE_00194	RNaseP_bact_b links to Rfam database...	0.48	0.45	0.50	54	73429	59	4	49	6	65
ASE_00196	RNaseP_arch links to Rfam database...	0.75	0.76	0.74	57	31549	26	2	18	6	18
ASE_00197	RNaseP_bact_a links to Rfam database...	0.62	0.59	0.66	85	89125	49	3	40	6	60
ASE_00198	RNaseP_bact_a links to Rfam database...	0.71	0.69	0.73	70	52554	30	4	22	4	32
ASE_00203	RNaseP_bact_a links to Rfam database...	0.78	0.74	0.82	71	46578	22	4	12	6	25
ASE_00204	RNaseP_bact_b links to Rfam database...	0.57	0.54	0.61	60	67798	46	5	33	8	52
ASE_00205	RNaseP_arch links to Rfam database...	0.45	0.46	0.45	41	45964	60	7	44	9	49
ASE_00209	RNaseP_arch links to Rfam database...	0.56	0.51	0.61	45	42997	31	3	26	2	43
ASE_00210	RNaseP_arch links to Rfam database...	0.58	0.60	0.57	39	27192	31	7	23	1	26
ASE_00212	RNaseP_bact_a links to Rfam database...	0.68	0.64	0.71	95	93828	46	3	35	8	53
ASE_00213	RNaseP_arch links to Rfam database...	0.58	0.58	0.58	38	27196	30	5	22	3	28
ASE_00214	RNaseP_bact_a links to Rfam database...	0.80	0.78	0.82	80	56183	27	3	14	10	23
ASE_00215	RNaseP_bact_a links to Rfam database...	0.54	0.51	0.57	50	48429	39	4	33	2	49
ASE_00216	RNaseP_bact_a links to Rfam database...	0.58	0.59	0.58	48	39257	36	9	26	1	34
ASE_00217	RNaseP_bact_a links to Rfam database...	0.42	0.39	0.46	35	40394	47	2	39	6	55
ASE_00221	RNaseP_bact_a links to Rfam database...	0.66	0.60	0.72	70	64523	31	1	26	4	47
ASE_00222	RNaseP_arch links to Rfam database...	0.72	0.71	0.74	111	111950	46	7	33	6	46
ASE_00227	RNaseP_bact_a links to Rfam database...	0.31	0.29	0.34	39	78887	77	6	71	0	94
ASE_00228	RNaseP_bact_a links to Rfam database...	0.79	0.78	0.80	67	46887	20	8	9	3	19
ASE_00229	RNaseP_bact_a links to Rfam database...	0.67	0.64	0.71	56	42407	28	4	19	5	31
ASE_00231	RNaseP_bact_a links to Rfam database...	0.77	0.75	0.79	72	47804	20	3	16	1	24
ASE_00232	RNaseP_bact_a links to Rfam database...	0.64	0.64	0.64	54	38418	33	10	21	2	30
ASE_00234	RNaseP_bact_a links to Rfam database...	0.55	0.50	0.60	64	75360	47	3	39	5	65
ASE_00237	RNaseP_nuc links to Rfam database...	0.08	0.09	0.07	5	45683	79	14	51	14	51
ASE_00238	RNaseP_bact_a links to Rfam database...	0.68	0.62	0.75	71	64166	26	1	23	2	43
ASE_00240	RNaseP_bact_a links to Rfam database...	0.41	0.39	0.43	36	46581	51	1	47	3	57
ASE_00241	RNaseP_bact_a links to Rfam database...	0.79	0.74	0.85	64	43881	17	2	9	6	23
ASE_00242	RNaseP_bact_a links to Rfam database...	0.76	0.72	0.79	81	60973	24	6	15	3	31
ASE_00246	RNaseP_nuc links to Rfam database...	0.36	0.37	0.34	25	48132	70	12	36	22	42
ASE_00247	RNaseP_nuc links to Rfam database...	0.16	0.19	0.14	12	54201	94	19	53	22	52
ASE_00248	RNaseP_bact_a links to Rfam database...	0.62	0.58	0.67	66	62383	36	1	31	4	48
ASE_00250	RNaseP_bact_a links to Rfam database...	0.61	0.57	0.66	75	78889	45	2	37	6	56
ASE_00252	RNaseP_bact_a links to Rfam database...	0.74	0.70	0.80	117	115293	39	2	28	9	51
ASE_00254	RNaseP_bact_a links to Rfam database...	0.77	0.73	0.81	60	36782	20	5	9	6	22
ASE_00255	RNaseP_bact_a links to Rfam database...	0.64	0.62	0.67	80	74571	46	4	36	6	50
ASE_00257	RNaseP_bact_a links to Rfam database...	0.77	0.74	0.81	72	50951	21	2	15	4	25
ASE_00259	RNaseP_bact_a links to Rfam database...	0.46	0.41	0.51	50	73054	53	5	44	4	71
ASE_00263	RNaseP_bact_a links to Rfam database...	0.56	0.56	0.57	67	70383	50	4	46	0	53
ASE_00264	RNaseP_nuc links to Rfam database...	0.43	0.43	0.43	43	49041	67	9	48	10	57
ASE_00267	RNaseP_bact_a links to Rfam database...	0.49	0.47	0.52	41	45071	44	3	35	6	47
ASE_00270	RNaseP_bact_a links to Rfam database...	0.72	0.70	0.75	89	72271	33	3	27	3	39
ASE_00274	RNaseP_bact_a links to Rfam database...	0.48	0.47	0.51	48	55516	49	6	41	2	55
ASE_00277	RNaseP_bact_a links to Rfam database...	0.61	0.59	0.63	54	48119	35	5	27	3	37
ASE_00279	RNaseP_bact_a links to Rfam database...	0.52	0.51	0.53	52	53202	48	8	39	1	49
ASE_00280	RNaseP_bact_a links to Rfam database...	0.61	0.58	0.64	57	51914	35	4	28	3	41
ASE_00281	RNaseP_bact_a links to Rfam database...	0.70	0.65	0.75	57	44475	26	1	18	7	31
ASE_00282	RNaseP_bact_a links to Rfam database...	0.49	0.47	0.51	60	77698	59	9	48	2	67
ASE_00283	RNaseP_bact_a links to Rfam database...	0.64	0.63	0.66	67	61674	41	4	31	6	40
ASE_00284	RNaseP_bact_a links to Rfam database...	0.65	0.63	0.67	68	58209	40	6	28	6	40
ASE_00285	RNaseP_bact_a links to Rfam database...	0.83	0.79	0.87	96	68896	23	3	11	9	26
ASE_00286	RNaseP_bact_a links to Rfam database...	0.73	0.70	0.77	64	46582	24	1	18	5	28
ASE_00287	RNaseP_bact_a links to Rfam database...	0.68	0.65	0.72	67	54853	32	3	23	6	36
ASE_00288	RNaseP_bact_a links to Rfam database...	0.61	0.55	0.69	51	45982	27	3	20	4	42
ASE_00289	RNaseP_bact_a links to Rfam database...	0.80	0.74	0.87	116	100891	24	2	16	6	41
ASE_00292	RNaseP_bact_a links to Rfam database...	0.59	0.53	0.66	73	81699	43	2	36	5	65
ASE_00294	RNaseP_bact_a links to Rfam database...	0.73	0.68	0.78	116	114333	36	3	29	4	55
ASE_00295	RNaseP_bact_a links to Rfam database...	0.66	0.62	0.70	81	73804	37	3	32	2	50
ASE_00296	RNaseP_bact_a links to Rfam database...	0.55	0.54	0.57	78	91670	61	5	53	3	67
ASE_00297	RNaseP_bact_a links to Rfam database...	0.68	0.67	0.68	66	52878	37	5	26	6	32
ASE_00298	RNaseP_bact_a links to Rfam database...	0.28	0.27	0.29	31	67422	79	7	68	4	82
ASE_00299	RNaseP_bact_a links to Rfam database...	0.51	0.51	0.52	51	49356	54	3	45	6	49
ASE_00313	RNaseP_nuc links to Rfam database...	0.54	0.56	0.52	50	62384	69	9	38	22	39
ASE_00316	RNaseP_nuc links to Rfam database...	0.66	0.64	0.68	63	107788	83	5	24	54	35
ASE_00318	RNaseP_bact_b links to Rfam database...	0.63	0.60	0.66	71	80093	40	12	24	4	47
ASE_00327	RNaseP_nuc links to Rfam database...	0.81	0.80	0.83	71	57205	34	3	12	19	18
ASE_00328	RNaseP_bact_b links to Rfam database...	0.63	0.59	0.67	66	72673	41	5	27	9	46
ASE_00330	RNaseP_nuc links to Rfam database...	0.78	0.78	0.78	70	56190	41	1	19	21	20
ASE_00332	RNaseP_bact_a links to Rfam database...	0.56	0.55	0.58	76	81678	60	2	54	4	62
ASE_00335	RNaseP_bact_b links to Rfam database...	0.62	0.57	0.68	66	75369	44	2	29	13	50
ASE_00337	RNaseP_nuc links to Rfam database...	0.52	0.54	0.51	38	39266	51	5	31	15	33
ASE_00338	RNaseP_nuc links to Rfam database...	0.68	0.66	0.71	65	66338	45	4	23	18	33
ASE_00339	RNaseP_bact_a links to Rfam database...	0.74	0.71	0.78	84	80092	36	0	24	12	35
ASE_00340	RNaseP_bact_a links to Rfam database...	0.47	0.45	0.49	38	45978	44	4	36	4	47
ASE_00342	RNaseP_bact_a links to Rfam database...	0.67	0.64	0.70	74	62376	33	4	27	2	41
ASE_00343	RNaseP_bact_a links to Rfam database...	0.70	0.65	0.75	73	83339	39	1	23	15	40
ASE_00346	RNaseP_arch links to Rfam database...	0.34	0.34	0.35	33	48111	67	4	57	6	64
ASE_00353	RNaseP_bact_a links to Rfam database...	0.77	0.75	0.78	80	57868	29	1	21	7	27
ASE_00359	RNaseP_arch links to Rfam database...	0.49	0.48	0.51	38	42703	44	3	34	7	42
ASE_00360	RNaseP_arch links to Rfam database...	0.31	0.31	0.32	20	29341	43	8	34	1	45
ASE_00361	RNaseP_bact_a links to Rfam database...	0.64	0.61	0.67	77	75351	42	8	30	4	50
ASE_00362	RNaseP_bact_a links to Rfam database...	0.60	0.59	0.60	54	48115	38	2	34	2	37
ASE_00363	RNaseP_bact_a links to Rfam database...	0.78	0.77	0.80	72	51270	25	1	17	7	22
ASE_00364	RNaseP_bact_a links to Rfam database...	0.74	0.71	0.77	75	54187	33	3	20	10	30
ASE_00366	RNaseP_bact_a links to Rfam database...	0.37	0.38	0.36	37	58550	68	7	59	2	61
ASE_00367	RNaseP_bact_a links to Rfam database...	0.50	0.50	0.50	43	42985	49	8	35	6	43
ASE_00369	RNaseP_bact_a links to Rfam database...	0.75	0.72	0.78	77	55846	28	1	21	6	30
ASE_00370	RNaseP_bact_a links to Rfam database...	0.63	0.63	0.62	53	41820	35	4	28	3	31
ASE_00372	RNaseP_bact_a links to Rfam database...	0.70	0.68	0.72	68	51908	33	4	23	6	32
ASE_00374	RNaseP_bact_a links to Rfam database...	0.74	0.73	0.74	64	44764	23	5	17	1	24
ASE_00375	RNaseP_bact_a links to Rfam database...	0.85	0.77	0.93	85	60287	12	1	5	6	25
ASE_00376	RNaseP_bact_a links to Rfam database...	0.61	0.60	0.63	63	56853	41	4	33	4	42
ASE_00377	RNaseP_bact_a links to Rfam database...	0.77	0.76	0.78	81	57526	29	4	19	6	26
ASE_00379	RNaseP_bact_a links to Rfam database...	0.60	0.58	0.63	52	45973	39	4	27	8	37
ASE_00380	RNaseP_bact_a links to Rfam database...	0.61	0.57	0.67	56	54862	34	7	21	6	43
ASE_00382	RNaseP_bact_a links to Rfam database...	0.58	0.56	0.59	47	41826	36	6	26	4	37
ASE_00383	RNaseP_bact_a links to Rfam database...	0.74	0.72	0.75	76	54514	32	3	22	7	29
ASE_00384	RNaseP_bact_a links to Rfam database...	0.78	0.76	0.80	70	48428	22	2	16	4	22
ASE_00385	RNaseP_bact_a links to Rfam database...	0.59	0.58	0.59	47	41826	33	5	27	1	34
ASE_00386	RNaseP_bact_a links to Rfam database...	0.67	0.66	0.68	63	50310	36	1	29	6	33
ASE_00387	RNaseP_bact_a links to Rfam database...	0.69	0.65	0.73	68	55852	27	1	24	2	36
ASE_00388	RNaseP_bact_a links to Rfam database...	0.72	0.67	0.78	60	45676	22	1	16	5	29
ASE_00390	RNaseP_bact_a links to Rfam database...	0.65	0.64	0.67	54	42114	37	3	24	10	31
ASE_00393	RNaseP_bact_a links to Rfam database...	0.72	0.68	0.77	63	47813	26	2	17	7	30
ASE_00394	RNaseP_bact_a links to Rfam database...	0.80	0.80	0.81	74	46880	20	4	13	3	19
ASE_00395	RNaseP_bact_a links to Rfam database...	0.68	0.68	0.69	57	41533	29	5	21	3	27
ASE_00396	RNaseP_bact_a links to Rfam database...	0.56	0.54	0.58	45	41538	34	2	31	1	38
ASE_00397	RNaseP_bact_a links to Rfam database...	0.64	0.64	0.65	67	54512	41	6	30	5	38
ASE_00398	RNaseP_bact_a links to Rfam database...	0.68	0.63	0.74	65	55857	30	1	22	7	39
ASE_00400	RNaseP_bact_a links to Rfam database...	0.66	0.63	0.70	67	57874	31	1	28	2	39
ASE_00401	RNaseP_bact_a links to Rfam database...	0.63	0.63	0.64	79	76904	46	7	38	1	47
ASE_00402	RNaseP_bact_a links to Rfam database...	0.78	0.74	0.83	63	42410	18	1	12	5	22
ASE_00403	RNaseP_bact_a links to Rfam database...	0.39	0.36	0.41	39	55850	61	3	53	5	68
ASE_00404	RNaseP_bact_a links to Rfam database...	0.54	0.53	0.55	45	42989	38	2	35	1	40
ASE_00406	RNaseP_bact_a links to Rfam database...	0.72	0.71	0.74	67	48737	29	6	18	5	27
ASE_00411	RNaseP_bact_a links to Rfam database...	0.56	0.53	0.59	47	49376	34	7	25	2	42
ASE_00412	RNaseP_bact_a links to Rfam database...	0.63	0.59	0.67	62	58218	40	4	27	9	43
ASE_00413	RNaseP_bact_a links to Rfam database...	0.49	0.48	0.50	39	44473	43	10	29	4	42
ASE_00414	RNaseP_bact_a links to Rfam database...	0.47	0.45	0.49	43	46272	52	1	44	7	52
ASE_00415	RNaseP_bact_a links to Rfam database...	0.54	0.52	0.56	54	54849	50	3	40	7	49
ASE_00416	RNaseP_bact_a links to Rfam database...	0.61	0.58	0.63	74	77304	51	5	38	8	53
ASE_00417	RNaseP_arch links to Rfam database...	0.47	0.47	0.47	47	54516	55	2	50	3	53
ASE_00418	RNaseP_arch links to Rfam database...	0.06	0.07	0.07	5	38706	72	5	65	2	70
ASE_00419	RNaseP_bact_a links to Rfam database...	0.77	0.77	0.78	79	54845	24	9	13	2	24
ASE_00422	RNaseP_bact_a links to Rfam database...	0.68	0.67	0.68	63	46879	34	5	24	5	31
ASE_00423	RNaseP_bact_a links to Rfam database...	0.67	0.66	0.68	72	56847	36	7	27	2	37
ASE_00426	RNaseP_bact_a links to Rfam database...	0.57	0.53	0.63	57	60984	35	7	27	1	51
ASE_00428	RNaseP_bact_a links to Rfam database...	0.67	0.62	0.73	78	76529	38	2	27	9	47
ASE_00430	RNaseP_bact_a links to Rfam database...	0.69	0.68	0.70	66	46877	35	5	23	7	31
ASE_00431	RNaseP_bact_a links to Rfam database...	0.54	0.51	0.58	48	46277	49	0	35	14	47
ASE_00434	RNaseP_bact_b links to Rfam database...	0.67	0.63	0.71	69	68168	42	3	25	14	41
ASE_00437	RNaseP_bact_a links to Rfam database...	0.46	0.41	0.52	55	79296	53	1	49	3	80
ASE_00438	RNaseP_bact_a links to Rfam database...	0.66	0.61	0.71	71	65966	32	2	27	3	45
ASE_00441	RNaseP_bact_a links to Rfam database...	0.82	0.76	0.89	85	64166	20	2	8	10	27
ASE_00447	RNaseP_bact_a links to Rfam database...	0.73	0.68	0.79	79	60278	27	0	21	6	37
ASE_00448	RNaseP_bact_a links to Rfam database...	0.40	0.38	0.42	42	64162	65	8	49	8	70
ASE_00451	RNaseP_bact_a links to Rfam database...	0.74	0.69	0.79	86	70767	24	2	21	1	39
CRW_00013	Intron_gpI links to Rfam database...	0.43	0.39	0.47	45	103644	80	11	40	29	70
CRW_00016	Intron_gpI links to Rfam database...	0.73	0.68	0.79	81	77319	37	0	21	16	39
CRW_00610	Intron_gpI links to Rfam database...	0.50	0.49	0.51	40	36237	41	9	29	3	41
CRW_00613	Intron_gpI links to Rfam database...	0.79	0.77	0.81	60	34906	22	1	13	8	18
CRW_00614	Intron_gpI links to Rfam database...	0.24	0.25	0.23	14	121709	121	7	41	73	43
CRW_00618	Intron_gpI links to Rfam database...	0.20	0.21	0.19	13	56213	75	8	46	21	48
CRW_00619	Intron_gpI links to Rfam database...	0.45	0.40	0.52	29	164969	110	5	22	83	44
CRW_00620	Intron_gpI links to Rfam database...	0.18	0.22	0.15	14	150884	136	23	54	59	49
CRW_00621	Intron_gpI links to Rfam database...	0.37	0.35	0.38	25	153116	137	6	34	97	46
CRW_00623	Intron_gpI links to Rfam database...	0.25	0.20	0.31	17	129740	100	5	33	62	66
CRW_00633	Intron_gpI links to Rfam database...	0.58	0.55	0.62	58	63453	37	8	27	2	48
CRW_00634	Intron_gpI links to Rfam database...	0.58	0.59	0.57	55	64524	43	12	29	2	39
CRW_00670	Intron_gpI links to Rfam database...	0.76	0.71	0.83	85	70022	19	0	18	1	35
CRW_00671	Intron_gpI links to Rfam database...	0.73	0.70	0.77	82	62728	31	1	24	6	35
CRW_00672	Intron_gpI links to Rfam database...	0.53	0.52	0.55	58	72284	55	8	40	7	53
CRW_00674	Intron_gpI links to Rfam database...	0.70	0.66	0.74	82	83325	34	5	24	5	42
CRW_00676	Intron_gpI links to Rfam database...	0.42	0.44	0.40	51	93400	81	20	57	4	64
CRW_00692	Intron_gpI links to Rfam database...	0.45	0.44	0.47	40	68549	53	16	30	7	50
PDB_00827	Intron_gpI links to Rfam database...	0.77	0.65	0.90	53	26969	8	0	6	2	28
PDB_00919	RNaseP_bact_a links to Rfam database...	0.56	0.52	0.59	54	44162	41	5	32	4	49
RFA_00597	Telomerase-vert links to Rfam database...	0.60	0.61	0.59	67	97789	69	16	31	22	42
RFA_00598	Telomerase-vert links to Rfam database...	0.47	0.47	0.48	47	84569	79	6	44	29	54
RFA_00599	Telomerase-vert links to Rfam database...	0.71	0.73	0.70	81	101359	59	10	25	24	30
RFA_00600	Telomerase-vert links to Rfam database...	0.67	0.72	0.62	72	120178	86	21	24	41	28
RFA_00601	Telomerase-vert links to Rfam database...	0.33	0.36	0.30	41	99097	108	37	60	11	73
RFA_00602	Telomerase-vert links to Rfam database...	0.63	0.67	0.58	78	101341	68	25	31	12	38
TMR_00007	tmRNA links to Rfam database...	0.80	0.75	0.84	81	61680	22	3	12	7	27
TMR_00008	tmRNA links to Rfam database...	0.60	0.58	0.63	62	65967	48	11	26	11	44
TMR_00010	tmRNA links to Rfam database...	0.36	0.34	0.37	33	57881	62	6	50	6	63
TMR_00012	tmRNA links to Rfam database...	0.40	0.42	0.39	34	64533	74	17	36	21	47
TMR_00014	tmRNA links to Rfam database...	0.72	0.70	0.74	77	68531	37	11	16	10	33
TMR_00017	tmRNA links to Rfam database...	0.49	0.44	0.54	45	67078	42	5	33	4	57
TMR_00018	tmRNA links to Rfam database...	0.38	0.37	0.40	34	64535	55	13	38	4	58
TMR_00028	tmRNA links to Rfam database...	0.69	0.68	0.70	66	62741	35	5	23	7	31
TMR_00030	tmRNA links to Rfam database...	0.37	0.35	0.39	39	75754	67	10	52	5	72
TMR_00034	tmRNA links to Rfam database...	0.62	0.62	0.62	68	59922	48	10	31	7	42
TMR_00035	tmRNA links to Rfam database...	0.52	0.55	0.49	54	67786	63	13	43	7	44
TMR_00036	tmRNA links to Rfam database...	0.69	0.61	0.77	62	90444	51	5	14	32	39
TMR_00038	tmRNA links to Rfam database...	0.26	0.25	0.26	28	71146	85	15	64	6	82
TMR_00042	tmRNA links to Rfam database...	0.29	0.30	0.29	29	62736	74	13	57	4	69
TMR_00046	tmRNA links to Rfam database...	0.60	0.58	0.62	56	62745	44	6	28	10	40
TMR_00047	tmRNA links to Rfam database...	0.23	0.25	0.22	14	48452	68	13	37	18	43
TMR_00048	tmRNA links to Rfam database...	0.40	0.41	0.40	39	64882	69	13	46	10	56
TMR_00049	tmRNA links to Rfam database...	0.58	0.56	0.59	49	63107	50	5	29	16	38
TMR_00051	tmRNA links to Rfam database...	0.66	0.63	0.69	59	65618	44	2	24	18	35
TMR_00055	tmRNA links to Rfam database...	0.43	0.40	0.46	46	78902	56	15	40	1	68
TMR_00057	tmRNA links to Rfam database...	0.24	0.28	0.21	22	73815	93	19	64	10	57
TMR_00061	tmRNA links to Rfam database...	0.36	0.34	0.37	34	59593	68	8	50	10	65
TMR_00062	tmRNA links to Rfam database...	0.59	0.61	0.57	63	78496	63	7	40	16	41
TMR_00064	tmRNA links to Rfam database...	0.39	0.38	0.41	39	76932	57	17	40	0	64
TMR_00065	tmRNA links to Rfam database...	0.49	0.49	0.50	52	76531	57	16	37	4	54
TMR_00067	tmRNA links to Rfam database...	0.45	0.45	0.46	51	82104	66	7	53	6	63
TMR_00073	tmRNA links to Rfam database...	0.66	0.62	0.71	72	65602	30	5	24	1	45
TMR_00076	tmRNA links to Rfam database...	0.47	0.48	0.46	48	70771	68	19	38	11	52
TMR_00080	tmRNA links to Rfam database...	0.43	0.42	0.44	40	70410	50	15	35	0	56
TMR_00081	tmRNA links to Rfam database...	0.50	0.43	0.58	46	67082	33	8	25	0	60
TMR_00082	tmRNA links to Rfam database...	0.29	0.28	0.30	27	67807	64	9	53	2	69
TMR_00083	tmRNA links to Rfam database...	0.68	0.67	0.69	70	68163	42	4	28	10	35
TMR_00092	tmRNA links to Rfam database...	0.62	0.65	0.59	66	67417	54	11	34	9	35
TMR_00093	tmRNA links to Rfam database...	0.41	0.39	0.43	40	64167	63	14	40	9	62
TMR_00096	tmRNA links to Rfam database...	0.30	0.28	0.33	28	64894	67	13	45	9	72
TMR_00101	tmRNA links to Rfam database...	0.62	0.61	0.64	65	64160	50	8	28	14	42
TMR_00102	tmRNA links to Rfam database...	0.34	0.34	0.35	34	64163	68	12	52	4	67
TMR_00103	tmRNA links to Rfam database...	0.55	0.58	0.53	63	64142	60	16	40	4	45
TMR_00106	tmRNA links to Rfam database...	0.56	0.51	0.62	61	90001	42	12	26	4	59
TMR_00109	tmRNA links to Rfam database...	0.41	0.42	0.40	51	88283	78	21	55	2	71
TMR_00111	tmRNA links to Rfam database...	0.54	0.52	0.56	63	90413	54	12	37	5	59
TMR_00116	tmRNA links to Rfam database...	0.74	0.67	0.81	70	64894	34	1	15	18	34
TMR_00117	tmRNA links to Rfam database...	0.73	0.70	0.75	83	80090	36	9	18	9	35
TMR_00118	tmRNA links to Rfam database...	0.53	0.52	0.55	62	81293	60	7	44	9	58
TMR_00119	tmRNA links to Rfam database...	0.65	0.63	0.67	66	71912	41	4	28	9	38
TMR_00123	tmRNA links to Rfam database...	0.53	0.51	0.55	52	66335	52	4	39	9	49
TMR_00124	tmRNA links to Rfam database...	0.59	0.59	0.60	58	70403	51	13	26	12	40
TMR_00125	tmRNA links to Rfam database...	0.28	0.26	0.31	26	64176	63	13	46	4	73
TMR_00127	tmRNA links to Rfam database...	0.61	0.62	0.61	60	62737	52	3	35	14	37
TMR_00128	tmRNA links to Rfam database...	0.34	0.34	0.33	33	60976	66	20	46	0	63
TMR_00131	tmRNA links to Rfam database...	0.56	0.53	0.60	52	64893	43	5	30	8	47
TMR_00135	tmRNA links to Rfam database...	0.65	0.65	0.65	64	62736	50	6	29	15	35
TMR_00136	tmRNA links to Rfam database...	0.20	0.22	0.19	22	74577	95	21	71	3	79
TMR_00137	tmRNA links to Rfam database...	0.37	0.34	0.41	30	61001	53	6	38	9	59
TMR_00139	tmRNA links to Rfam database...	0.63	0.67	0.59	61	62025	53	19	23	11	30
TMR_00140	tmRNA links to Rfam database...	0.55	0.55	0.56	55	73822	64	3	40	21	45
TMR_00142	tmRNA links to Rfam database...	0.57	0.58	0.56	59	70771	61	13	33	15	43
TMR_00143	tmRNA links to Rfam database...	0.45	0.46	0.45	47	64516	68	10	47	11	56
TMR_00144	tmRNA links to Rfam database...	0.40	0.37	0.43	38	74217	55	8	42	5	65
TMR_00146	tmRNA links to Rfam database...	0.85	0.90	0.79	38	32083	35	7	3	25	4
TMR_00150	tmRNA links to Rfam database...	0.72	0.71	0.73	30	43030	50	2	9	39	12
TMR_00152	tmRNA links to Rfam database...	0.33	0.31	0.36	36	81306	73	12	52	9	79
TMR_00155	tmRNA links to Rfam database...	0.62	0.60	0.64	62	61679	47	8	27	12	42
TMR_00156	tmRNA links to Rfam database...	0.61	0.59	0.64	57	60289	36	6	26	4	40
TMR_00158	tmRNA links to Rfam database...	0.51	0.51	0.51	50	60628	54	7	41	6	49
TMR_00159	tmRNA links to Rfam database...	0.62	0.60	0.65	55	62043	46	7	23	16	37
TMR_00160	tmRNA links to Rfam database...	0.50	0.49	0.51	47	64527	57	13	33	11	48
TMR_00164	tmRNA links to Rfam database...	0.42	0.40	0.45	42	66702	59	9	42	8	64
TMR_00165	tmRNA links to Rfam database...	0.48	0.46	0.49	45	61685	53	9	37	7	52
TMR_00166	tmRNA links to Rfam database...	0.39	0.38	0.41	38	61683	65	5	50	10	63
TMR_00168	tmRNA links to Rfam database...	0.72	0.68	0.76	78	60972	32	0	25	7	36
TMR_00173	tmRNA links to Rfam database...	0.32	0.36	0.29	15	42143	71	13	24	34	27
TMR_00179	tmRNA links to Rfam database...	0.44	0.46	0.43	45	67056	67	10	50	7	53
TMR_00180	tmRNA links to Rfam database...	0.72	0.72	0.72	71	67063	42	5	22	15	28
TMR_00182	tmRNA links to Rfam database...	0.22	0.22	0.22	22	66330	84	10	68	6	80
TMR_00183	tmRNA links to Rfam database...	0.25	0.24	0.25	25	63091	80	10	64	6	78
TMR_00184	tmRNA links to Rfam database...	0.41	0.41	0.41	42	63087	73	4	57	12	60
TMR_00193	tmRNA links to Rfam database...	0.56	0.55	0.56	44	59262	47	6	28	13	36
TMR_00194	tmRNA links to Rfam database...	0.51	0.46	0.56	43	62758	42	2	32	8	50
TMR_00196	tmRNA links to Rfam database...	0.45	0.42	0.48	41	60989	55	11	34	10	56
TMR_00199	tmRNA links to Rfam database...	0.57	0.59	0.56	54	62738	51	18	25	8	38
TMR_00204	tmRNA links to Rfam database...	0.56	0.53	0.61	51	60294	43	10	23	10	46
TMR_00207	tmRNA links to Rfam database...	0.43	0.40	0.48	41	72304	50	5	40	5	62
TMR_00223	tmRNA links to Rfam database...	0.40	0.38	0.43	36	64177	53	10	38	5	59
TMR_00224	tmRNA links to Rfam database...	0.49	0.45	0.55	45	64898	42	7	30	5	56
TMR_00226	tmRNA links to Rfam database...	0.36	0.36	0.36	38	69644	77	17	52	8	67
TMR_00227	tmRNA links to Rfam database...	0.38	0.39	0.37	39	70019	72	12	55	5	62
TMR_00228	tmRNA links to Rfam database...	0.32	0.34	0.30	37	88287	91	21	65	5	71
TMR_00234	tmRNA links to Rfam database...	0.36	0.32	0.40	33	58913	56	6	44	6	69
TMR_00238	tmRNA links to Rfam database...	0.31	0.33	0.29	33	84552	87	24	57	6	68
TMR_00239	tmRNA links to Rfam database...	0.50	0.51	0.50	49	61678	56	9	40	7	47
TMR_00240	tmRNA links to Rfam database...	0.60	0.61	0.60	52	63103	43	14	21	8	33
TMR_00248	tmRNA links to Rfam database...	0.42	0.39	0.45	15	54252	64	3	15	46	23
TMR_00257	tmRNA links to Rfam database...	0.25	0.22	0.27	22	67080	65	2	57	6	76
TMR_00259	tmRNA links to Rfam database...	0.38	0.35	0.41	36	67809	51	10	41	0	67
TMR_00261	tmRNA links to Rfam database...	0.58	0.60	0.55	61	66685	58	17	32	9	40
TMR_00262	tmRNA links to Rfam database...	0.46	0.46	0.46	48	74200	61	16	41	4	56
TMR_00271	tmRNA links to Rfam database...	0.64	0.62	0.67	56	64177	40	6	22	12	35
TMR_00274	tmRNA links to Rfam database...	0.60	0.59	0.60	62	66692	47	13	28	6	43
TMR_00278	tmRNA links to Rfam database...	0.42	0.43	0.42	44	67790	71	5	57	9	58
TMR_00279	tmRNA links to Rfam database...	0.53	0.54	0.52	51	68908	60	8	39	13	43
TMR_00280	tmRNA links to Rfam database...	0.60	0.62	0.58	63	65958	64	4	41	19	38
TMR_00283	tmRNA links to Rfam database...	0.65	0.63	0.67	60	65252	41	5	24	12	36
TMR_00289	tmRNA links to Rfam database...	0.53	0.52	0.54	51	67066	54	5	39	10	47
TMR_00290	tmRNA links to Rfam database...	0.61	0.59	0.64	54	64177	43	4	26	13	38
TMR_00296	tmRNA links to Rfam database...	0.49	0.50	0.48	49	68903	59	12	42	5	49
TMR_00298	tmRNA links to Rfam database...	0.54	0.51	0.56	52	68172	50	11	30	9	49
TMR_00300	tmRNA links to Rfam database...	0.63	0.63	0.63	71	70388	54	11	30	13	41
TMR_00301	tmRNA links to Rfam database...	0.58	0.51	0.66	49	82141	40	5	20	15	47
TMR_00302	tmRNA links to Rfam database...	0.33	0.35	0.31	33	77314	82	24	50	8	61
TMR_00305	tmRNA links to Rfam database...	0.59	0.57	0.62	58	60982	49	8	27	14	44
TMR_00306	tmRNA links to Rfam database...	0.67	0.68	0.67	72	64153	49	5	31	13	34
TMR_00310	tmRNA links to Rfam database...	0.56	0.55	0.58	54	63810	50	9	30	11	44
TMR_00317	tmRNA links to Rfam database...	0.68	0.68	0.68	69	68164	38	6	26	6	33
TMR_00331	tmRNA links to Rfam database...	0.37	0.40	0.34	33	66697	80	10	55	15	49
TMR_00332	tmRNA links to Rfam database...	0.45	0.40	0.50	40	67081	45	2	38	5	59
TMR_00334	tmRNA links to Rfam database...	0.38	0.37	0.40	37	66703	62	9	46	7	64
TMR_00337	tmRNA links to Rfam database...	0.48	0.45	0.50	54	82921	57	11	42	4	65
TMR_00340	tmRNA links to Rfam database...	0.51	0.52	0.51	42	64179	66	8	32	26	39
TMR_00341	tmRNA links to Rfam database...	0.27	0.28	0.26	26	63091	81	16	57	8	66
TMR_00343	tmRNA links to Rfam database...	0.37	0.35	0.39	37	64884	68	6	53	9	68
TMR_00345	tmRNA links to Rfam database...	0.70	0.68	0.72	71	63805	37	7	20	10	33
TMR_00346	tmRNA links to Rfam database...	0.53	0.53	0.54	50	64168	47	13	30	4	44
TMR_00348	tmRNA links to Rfam database...	0.32	0.29	0.35	29	77337	72	13	42	17	70
TMR_00352	tmRNA links to Rfam database...	0.14	0.16	0.12	12	95167	98	32	55	11	63
TMR_00353	tmRNA links to Rfam database...	0.52	0.55	0.50	58	84139	70	21	37	12	47
TMR_00357	tmRNA links to Rfam database...	0.37	0.35	0.39	32	82946	70	10	40	20	60
TMR_00358	tmRNA links to Rfam database...	0.68	0.69	0.67	68	74976	55	15	19	21	31
TMR_00366	tmRNA links to Rfam database...	0.52	0.50	0.53	50	67802	55	12	32	11	50
TMR_00372	tmRNA links to Rfam database...	0.59	0.59	0.59	57	70404	52	7	32	13	39
TMR_00374	tmRNA links to Rfam database...	0.35	0.36	0.35	33	81715	80	11	51	18	59
TMR_00375	tmRNA links to Rfam database...	0.51	0.53	0.49	52	73429	63	14	41	8	46
TMR_00376	tmRNA links to Rfam database...	0.51	0.49	0.52	47	74601	60	9	34	17	48
TMR_00378	tmRNA links to Rfam database...	0.24	0.25	0.24	24	67797	86	17	58	11	73
TMR_00383	tmRNA links to Rfam database...	0.44	0.40	0.49	40	66714	50	11	30	9	60
TMR_00384	tmRNA links to Rfam database...	0.20	0.19	0.22	20	65614	74	4	65	5	88
TMR_00393	tmRNA links to Rfam database...	0.58	0.62	0.54	33	53240	62	9	19	34	20
TMR_00395	tmRNA links to Rfam database...	0.75	0.72	0.78	78	64520	30	5	17	8	31
TMR_00398	tmRNA links to Rfam database...	0.72	0.70	0.75	74	65242	34	8	17	9	32
TMR_00399	tmRNA links to Rfam database...	0.44	0.43	0.47	40	64894	52	16	30	6	54
TMR_00404	tmRNA links to Rfam database...	0.56	0.58	0.55	53	67431	62	11	33	18	39
TMR_00408	tmRNA links to Rfam database...	0.58	0.61	0.55	54	65968	57	14	30	13	34
TMR_00409	tmRNA links to Rfam database...	0.64	0.76	0.55	35	68571	80	10	19	51	11
TMR_00411	tmRNA links to Rfam database...	0.61	0.60	0.62	52	60991	44	9	23	12	35
TMR_00415	tmRNA links to Rfam database...	0.64	0.62	0.66	63	67066	36	3	29	4	38
TMR_00419	tmRNA links to Rfam database...	0.63	0.61	0.65	68	81706	55	12	24	19	43
TMR_00422	tmRNA links to Rfam database...	0.53	0.58	0.48	53	67786	75	17	40	18	39
TMR_00423	tmRNA links to Rfam database...	0.52	0.56	0.48	41	63817	64	16	29	19	32
TMR_00427	tmRNA links to Rfam database...	0.45	0.42	0.48	41	67443	49	10	34	5	56
TMR_00429	tmRNA links to Rfam database...	0.38	0.38	0.38	41	74583	72	15	52	5	68
TMR_00430	tmRNA links to Rfam database...	0.18	0.18	0.17	20	82505	96	25	71	0	89
TMR_00431	tmRNA links to Rfam database...	0.70	0.69	0.72	38	51950	55	6	9	40	17
TMR_00432	tmRNA links to Rfam database...	0.46	0.45	0.46	47	79698	63	11	44	8	57
TMR_00433	tmRNA links to Rfam database...	0.59	0.59	0.58	63	80092	51	11	34	6	43
TMR_00439	tmRNA links to Rfam database...	0.45	0.47	0.43	47	68525	75	15	48	12	54
TMR_00441	tmRNA links to Rfam database...	0.14	0.16	0.13	13	62031	95	20	64	11	70
TMR_00443	tmRNA links to Rfam database...	0.57	0.51	0.65	53	67079	36	6	23	7	51
TMR_00448	tmRNA links to Rfam database...	0.47	0.45	0.49	41	62045	50	7	35	8	51
TMR_00451	tmRNA links to Rfam database...	0.19	0.19	0.18	17	63453	80	18	58	4	72
TMR_00457	tmRNA links to Rfam database...	0.22	0.24	0.21	24	78491	96	11	80	5	78
TMR_00458	tmRNA links to Rfam database...	0.32	0.30	0.35	28	63465	60	11	42	7	65
TMR_00460	tmRNA links to Rfam database...	0.65	0.64	0.67	68	79299	42	6	28	8	38
TMR_00465	tmRNA links to Rfam database...	0.27	0.28	0.26	26	64160	79	23	52	4	68
TMR_00469	tmRNA links to Rfam database...	0.53	0.53	0.53	53	64520	51	13	34	4	47
TMR_00472	tmRNA links to Rfam database...	0.64	0.64	0.64	62	64523	43	12	23	8	35
TMR_00478	tmRNA links to Rfam database...	0.24	0.26	0.22	26	71894	94	21	69	4	73
TMR_00498	tmRNA links to Rfam database...	0.46	0.45	0.46	45	68909	60	20	32	8	54
TMR_00499	tmRNA links to Rfam database...	0.27	0.28	0.25	28	64510	88	10	72	6	71
TMR_00501	tmRNA links to Rfam database...	0.45	0.46	0.45	42	62387	61	9	43	9	50
TMR_00502	tmRNA links to Rfam database...	0.37	0.39	0.35	36	75364	77	19	47	11	57
TMR_00503	tmRNA links to Rfam database...	0.70	0.68	0.73	75	67793	38	6	22	10	36
TMR_00519	tmRNA links to Rfam database...	0.33	0.32	0.35	30	63105	69	8	47	14	65
TMR_00520	tmRNA links to Rfam database...	0.44	0.41	0.48	41	63104	56	9	36	11	58
TMR_00522	tmRNA links to Rfam database...	0.36	0.35	0.38	34	63100	65	12	44	9	63
TMR_00528	tmRNA links to Rfam database...	0.36	0.36	0.35	35	63091	75	20	44	11	62
TMR_00540	tmRNA links to Rfam database...	0.35	0.35	0.36	36	73436	76	10	54	12	68
TMR_00541	tmRNA links to Rfam database...	0.56	0.55	0.57	58	61674	54	6	38	10	47
TMR_00544	tmRNA links to Rfam database...	0.36	0.36	0.36	39	89567	82	13	57	12	69
TMR_00547	tmRNA links to Rfam database...	0.68	0.66	0.70	66	65247	33	0	28	5	34
TMR_00553	tmRNA links to Rfam database...	0.45	0.44	0.45	36	48125	50	9	35	6	45
TMR_00559	tmRNA links to Rfam database...	0.52	0.50	0.53	51	62385	53	7	38	8	50
TMR_00560	tmRNA links to Rfam database...	0.61	0.54	0.68	53	60997	30	2	23	5	45
TMR_00562	tmRNA links to Rfam database...	0.16	0.18	0.15	18	72652	102	19	82	1	84
TMR_00563	tmRNA links to Rfam database...	0.62	0.65	0.59	67	75352	55	19	28	8	36
TMR_00566	tmRNA links to Rfam database...	0.58	0.54	0.62	54	60639	38	6	27	5	46
TMR_00568	tmRNA links to Rfam database...	0.51	0.51	0.53	50	60631	51	6	39	6	49
TMR_00570	tmRNA links to Rfam database...	0.69	0.64	0.75	62	60295	30	2	19	9	35
TMR_00571	tmRNA links to Rfam database...	0.65	0.64	0.66	63	60631	44	7	25	12	36
TMR_00576	tmRNA links to Rfam database...	0.65	0.65	0.65	66	60277	44	8	27	9	36
TMR_00579	tmRNA links to Rfam database...	0.21	0.23	0.19	21	80490	99	23	67	9	69
TMR_00580	tmRNA links to Rfam database...	0.41	0.41	0.41	41	60625	63	15	45	3	59
TMR_00581	tmRNA links to Rfam database...	0.45	0.42	0.48	41	62396	49	9	35	5	57
TMR_00584	tmRNA links to Rfam database...	0.63	0.61	0.65	59	60984	45	3	29	13	38
TMR_00586	tmRNA links to Rfam database...	0.41	0.41	0.41	40	60977	63	11	47	5	57
TMR_00587	tmRNA links to Rfam database...	0.58	0.57	0.59	57	61329	48	6	33	9	43
TMR_00588	tmRNA links to Rfam database...	0.39	0.40	0.38	40	77315	71	23	43	5	61
TMR_00594	tmRNA links to Rfam database...	0.36	0.36	0.37	37	79300	70	12	52	6	67
TMR_00596	tmRNA links to Rfam database...	0.34	0.34	0.34	32	78115	78	16	47	15	63
TMR_00599	tmRNA links to Rfam database...	0.25	0.28	0.23	20	63102	75	25	43	7	52
TMR_00600	tmRNA links to Rfam database...	0.50	0.50	0.51	57	79688	61	10	45	6	58
TMR_00601	tmRNA links to Rfam database...	0.32	0.31	0.34	13	58958	72	5	20	47	29
TMR_00603	tmRNA links to Rfam database...	0.67	0.70	0.64	30	60331	69	6	11	52	13
TMR_00604	tmRNA links to Rfam database...	0.65	0.64	0.67	72	62727	41	3	33	5	40
TMR_00605	tmRNA links to Rfam database...	0.52	0.53	0.52	57	74195	60	16	37	7	51
TMR_00606	tmRNA links to Rfam database...	0.39	0.40	0.37	43	68891	79	8	64	7	64
TMR_00609	tmRNA links to Rfam database...	0.69	0.68	0.70	77	63436	41	8	25	8	36
TMR_00610	tmRNA links to Rfam database...	0.70	0.70	0.70	73	62023	47	9	23	15	31
TMR_00611	tmRNA links to Rfam database...	0.61	0.65	0.58	66	61311	48	13	35	0	36
TMR_00612	tmRNA links to Rfam database...	0.45	0.46	0.44	48	60616	67	8	54	5	56
TMR_00614	tmRNA links to Rfam database...	0.72	0.69	0.76	72	60980	34	3	20	11	32
TMR_00615	tmRNA links to Rfam database...	0.67	0.69	0.65	66	63802	46	14	21	11	30
TMR_00616	tmRNA links to Rfam database...	0.42	0.41	0.42	41	67063	65	12	45	8	58
TMR_00617	tmRNA links to Rfam database...	0.29	0.34	0.25	20	34635	70	17	44	9	38
TMR_00623	tmRNA links to Rfam database...	0.52	0.51	0.54	55	61323	53	2	45	6	53
TMR_00624	tmRNA links to Rfam database...	0.80	0.75	0.84	81	62385	30	4	11	15	27
TMR_00625	tmRNA links to Rfam database...	0.29	0.30	0.28	32	78887	87	22	62	3	74
TMR_00626	tmRNA links to Rfam database...	0.52	0.50	0.54	55	67794	52	8	39	5	54
TMR_00680	tmRNA links to Rfam database...	0.25	0.26	0.24	26	67789	89	15	66	8	73
TMR_00681	tmRNA links to Rfam database...	0.57	0.57	0.58	55	65971	52	4	36	12	42
TMR_00683	tmRNA links to Rfam database...	0.25	0.26	0.23	26	82917	95	19	66	10	74
TMR_00686	tmRNA links to Rfam database...	0.51	0.46	0.57	50	71165	50	9	29	12	58
TMR_00687	tmRNA links to Rfam database...	0.34	0.36	0.33	40	71510	83	12	69	2	71
TMR_00696	tmRNA links to Rfam database...	0.27	0.25	0.29	29	84977	86	12	60	14	85
TMR_00698	tmRNA links to Rfam database...	0.34	0.35	0.33	36	63081	73	18	55	0	68
TMR_00699	tmRNA links to Rfam database...	0.67	0.62	0.72	63	67074	29	4	20	5	39
TMR_00702	tmRNA links to Rfam database...	0.36	0.32	0.40	32	67081	57	5	43	9	68
TMR_00703	tmRNA links to Rfam database...	0.59	0.56	0.62	55	67439	43	6	28	9	44
TMR_00706	tmRNA links to Rfam database...	0.62	0.58	0.67	60	66340	34	6	24	4	43
TMR_00711	tmRNA links to Rfam database...	0.56	0.58	0.54	57	67791	56	16	32	8	41
TMR_00712	tmRNA links to Rfam database...	0.31	0.32	0.31	35	78493	90	17	61	12	74
TMR_00716	tmRNA links to Rfam database...	0.24	0.24	0.25	24	62738	78	10	63	5	76

^top

Matthews Correlation Coeffient, Sensitivity and Positive Predictive Value have been calculated based on the paper by Gardener & Giegerich, 2004.

Table of contents:

Overview

Performance plots

Performance of PETfold_pre2.0(seed) - scored higher in this pairwise comparison

1. Total counts & total scores for PETfold_pre2.0(seed)

2. Individual counts for PETfold_pre2.0(seed) [ download as .csv ]

Performance of Contrafold - scored lower in this pairwise comparison

1. Total counts & total scores for Contrafold

2. Individual counts for Contrafold [ download as .csv ]