SimRNA — Downloads

SimRNA is a tool for simulations of RNA conformational dynamics (folding, unfolding, multiple chain complex formation, etc.) and 3D structure prediction — version 3.20. By downloading SimRNA you accept the terms of the academic license. See also the user manual and the SimRNAweb server.

Software packages (v3.20)

• SimRNA — 64-bit Intel, Linux
• SimRNA — 64-bit Intel, Linux (static libs, without OpenMP)
• SimRNA — 32-bit Intel, Linux
• SimRNA — 32-bit Intel, Linux (static libs, without OpenMP)
• SimRNA — 64-bit Intel, macOS (static libs)

Documentation

• SimRNA User Manual (v3.20)
• SimRNA academic license

Benchmark models

• Das & Baker dataset — folded de novo
• Das & Baker dataset — folded with SS
• Ding et al. dataset — folded de novo
• Ding et al. dataset — folded with SS
• Seetin & Mathews dataset — folded de novo
• Seetin & Mathews dataset — folded with SS
• Seetin & Mathews dataset — folded with SS and additional restraints