Modomics - A Database of RNA Modifications

Modomics


MODOMICS is a database of RNA modifications that provides comprehensive information concerning the chemical structures of modified ribonucleosides, their biosynthetic pathways, the location of modified residues in RNA sequences, and RNA modifying enzymes.

Citation


When using Modomics, please cite:


Andrea Cappannini, Angana Ray, Elżbieta Purta, Sunandan Mukherjee, Pietro Boccaletto, S Naeim Moafinejad, Antony Lechner, Charles Barchet, Bruno P Klaholz, Filip Stefaniak, Janusz M Bujnicki
MODOMICS: a database of RNA modifications and related information. 2023 update
Nucleic Acids Research, gkab1083, https://doi.org/10.1093/nar/gkad1083


Pietro Boccaletto, Filip Stefaniak, Angana Ray, Andrea Cappannini, Sunandan Mukherjee, Elżbieta Purta, Małgorzata Kurkowska, Niloofar Shirvanizadeh, Eliana Destefanis, Paula Groza, Gülben Avşar, Antonia Romitelli, Pınar Pir, Erik Dassi, Silvestro G Conticello, Francesca Aguilo, Janusz M Bujnicki
MODOMICS: a database of RNA modification pathways. 2021 update
Nucleic Acids Research, gkab1083, https://doi.org/10.1093/nar/gkab1083

Pietro Boccaletto, Magdalena A. Machnicka, Elzbieta Purta, Paweł Piątkowski, Błażej Bagiński, Tomasz K. Wirecki, Valérie de Crécy-Lagard, Robert Ross, Patrick A. Limbach, Annika Kotter, Mark Helm
MODOMICS: a database of RNA modification pathways. 2017 update
Nucleic Acids Research 2017, 02 November, gkx1030, https://doi.org/10.1093/nar/gkx1030

Machnicka MA, Milanowska K, Osman Oglu O, Purta E, Kurkowska M, Olchowik A, Januszewski W, Kalinowski S, Dunin-Horkawicz S, Rother KM, Helm M, Bujnicki JM, Grosjean H
MODOMICS: a database of RNA modification pathways: 2012 update
Nucleic Acids Res 2013 Jan 1;41(D1): D262-D267

Czerwoniec A, Dunin-Horkawicz S, Purta E, Kaminska KH, Kasprzak J, Bujnicki JM, Grosjean H, Rother K
MODOMICS: a database of RNA modification pathways. 2008 update
Nucleic Acids Res 2009 Jan;37(Database issue):D118-21. [Epub 2008 Oct 14]

Dunin-Horkawicz S, Czerwoniec A, Gajda MJ, Feder M, Grosjean H, Bujnicki JM.
MODOMICS: a database of RNA modification pathways.
Nucleic Acids Res. 2006 Jan 1;34(Database issue):D145-9.