Name | Short Name | RNAMods code (2023) | MODOMICS code new (2023) | Moiety type | SMILES | Reference NucleoBase | MODOMICS code old | Old RNAMods code (old) | MODOMICS Database ID |
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Name | Short Name | RNAMods code (2023) | MODOMICS code new (2023) | Moiety type | SMILES | Reference NucleoBase | MODOMICS code old | Old RNAMods code (old) | MODOMICS Database ID |
---|---|---|---|---|---|---|---|---|---|
(2R,4S)-1-[(4R)-3,4-dihydroxytetrahydrofuran-2-YL]-5-[(methylamino)methyl]-1,2,3,4-tetrahydropyrimidine-2,4-diol-5'-monophosphate | pmnm5U | { | 2000511551U | nucleotide | CNCc1c(=O)[nH]c(=O)[n]([C@H]2[C@H](O)[C@H](O)[C@@H](COP(=O)([O-])[O-])O2)c1 | U | 511551U | { | 297 |
1,2'-O-dimethyladenosine | m1Am | œ | 2000000901A | nucleoside | CO[C@H]1[C@H]([n]2c3nc[n](c(=N)c3nc2)C)O[C@H](CO)[C@H]1O | A | 01A | œ | 32 |
1,2'-O-dimethyladenosine-5'-monophosphate | pm1Am | œ | 2000901551A | nucleotide | CO[C@@H]1[C@H](O)[C@@H](COP(=O)([O-])[O-])O[C@H]1[n]1cnc2c(=N)[n](C)cnc12 | A | 01551A | 340 | |
1,2'-O-dimethylguanosine | m1Gm | ε | 2000000901G | nucleoside | CO[C@H]1[C@H]([n]2c3nc([n](c(=O)c3nc2)C)N)O[C@H](CO)[C@H]1O | G | 01G | ε | 63 |
1,2'-O-dimethylguanosine-5'-monophosphate | pm1Gm | ε | 2000901551G | nucleotide | CO[C@@H]1[C@H](O)[C@@H](COP(=O)([O-])[O-])O[C@H]1[n]1cnc2c(=O)[n](C)c(N)nc12 | G | 01551G | ε | 341 |
1,2'-O-dimethylinosine | m1Im | ξ | 2000009019A | nucleoside | CO[C@H]1[C@H]([n]2c3nc[n](c(=O)c3nc2)C)O[C@H](CO)[C@H]1O | A | 019A | ξ | 33 |
1,2'-O-dimethylinosine-5'-monophosphate | pm1Im | ξ | 2009019551A | nucleotide | CO[C@@H]1[C@H](O)[C@@H](COP(=O)([O-])[O-])O[C@H]1[n]1cnc2c(=O)[n](C)cnc12 | A | 019551A | ξ | 342 |
1-(5-O-phosphono-beta-D-ribofuranosyl)-2-selanylpyrimidin-4(1H)-one | pse2U | ω | 2000020551U | nucleotide | O[C@@H]1[C@@H](COP(=O)([O-])[O-])O[C@@H]([n]2c(=[Se])[nH]c(=O)cc2)[C@@H]1O | U | 20551U | 230 | |
1-(beta-D-ribofuranosyl)-2-thio-uracil-5'-phosphate | ps2U | 2 | 2000002551U | nucleotide | O=c1cc[n]([C@@H]2O[C@H](COP(=O)([O-])[O-])[C@@H](O)[C@H]2O)c(=S)[nH]1 | U | 2551U | 2 | 187 |
1-methyl-3-(3-amino-3-carboxypropyl)pseudouridine | m1acp3Y | α | 2000001309U | nucleoside | C[n]1c(=O)[n](CCC(C(=O)O)N)c(=O)c([C@H]2[C@H](O)[C@H](O)[C@@H](CO)O2)c1 | U | 1309U | α | 8 |
1-methyl-3-(3-amino-3-carboxypropyl)pseudouridine-5'-monophosphate | pm1acp3Y | α | 2001309551U | nucleotide | C[n]1cc([C@@H]2O[C@H](COP(=O)([O-])[O-])[C@@H](O)[C@H]2O)c(=O)[n](CCC(N)C(=O)O)c1=O | U | 1309551U | α | 343 |
1-methyladenosine | m1A | Ѣ | 2000000001A | nucleoside | C[n]1c(=N)c2c([n]([C@H]3[C@H](O)[C@H](O)[C@@H](CO)O3)cn2)nc1 | A | 1A | " | 83 |
1-methylguanosine | m1G | K | 2000000001G | nucleoside | CN1C(=O)c2[n]c[n]([C@H]3[C@H](O)[C@H](O)[C@@H](CO)O3)c2N=C1N | G | 1G | K | 22 |
1-methylinosine | m1I | O | 2000000019A | nucleoside | C[n]1c(=O)c2c([n]([C@H]3[C@H](O)[C@H](O)[C@@H](CO)O3)cn2)nc1 | A | 19A | O | 26 |
1-methylinosine-5'-monophosphate | pm1I | O | 2000019551A | nucleotide | C[n]1cnc2c(nc[n]2[C@@H]2O[C@H](COP(=O)([O-])[O-])[C@@H](O)[C@H]2O)c1=O | A | 19551A | O | 344 |
1-methylpseudouridine | m1Y | ] | 2000000019U | nucleoside | C[n]1c(=O)[nH]c(=O)c([C@H]2[C@H](O)[C@H](O)[C@@H](CO)O2)c1 | U | 19U | ] | 88 |
1-methylpseudouridine-5'-monophosphate | pm1Y | ] | 2000019551U | nucleotide | C[n]1cc([C@@H]2O[C@H](COP(=O)([O-])[O-])[C@@H](O)[C@H]2O)c(=O)[nH]c1=O | U | 19551U | ] | 345 |
1N-methylguanosine-5'-monophosphate | pm1G | K | 2000001551G | nucleotide | [O-]P(OC[C@H]1O[C@H]([C@H](O)[C@@H]1O)[n]1c[n]c2c1N=C(N)N(C2=O)C)(=O)[O-] | G | 1551G | K | 214 |
2',5-dimethyluridine-5'-monophosphate | pm5Um | Ħ | 2000905551U | nucleotide | CO[C@H]1[C@H]([n]2c(=O)[nH]c(=O)c(C)c2)O[C@H](COP(=O)([O-])[O-])[C@H]1O | U | 05551U | \ | 296 |
2'-O-[(5'-phospho)ribosyl]adenosine-5'-monophosphate | pAr(p) | ʩ | 2900255551A | nucleotide | [O-]P(OC[C@H]1O[C@H]([C@H](O)[C@@H]1O)O[C@@H]1[C@H](O)[C@@H](COP(=O)([O-])[O-])O[C@H]1[n]1c[n]c2c1[n]c[n]c2N)(=O)[O-] | A | 00551A | ^ | 256 |
2'-O-methyl-5-hydroxymethylcytidine | hm5Cm | ¡ | 2000009051C | nucleoside | CO[C@H]1[C@H]([n]2cc(CO)c(N)nc2=O)O[C@H](CO)[C@H]1O | C | 051C | ¡ | 183 |
2'-O-methyl-5-hydroxymethylcytidine-5'-monophosphate | phm5Cm | ¡ | 2009051551C | nucleotide | CO[C@@H]1[C@H](O)[C@@H](COP(=O)([O-])[O-])O[C@H]1[n]1cc(CO)c(N)nc1=O | C | 051551C | 366 | |
2'-O-methyladenosine | Am | ʍ | 2000000090A | nucleoside | CO[C@H]1[C@H]([n]2cnc3c2ncnc3N)O[C@H](CO)[C@H]1O | A | 0A | : | 127 |
2'-O-methyladenosine 5'-(dihydrogen phosphate) | pAm | ʍ | 2000090551A | nucleotide | [O-]P(OC[C@H]1O[C@@H]([n]2c3[n]c[n]c(N)c3[n]c2)[C@@H]([C@@H]1O)OC)(=O)[O-] | A | 0551A | : | 207 |
2'-O-methylcytidine | Cm | B | 2000000090C | nucleoside | CO[C@H]1[C@H]([n]2ccc(N)nc2=O)O[C@H](CO)[C@H]1O | C | 0C | B | 84 |
2'-O-methylguanosine | Gm | # | 2000000090G | nucleoside | CO[C@H]1[C@H]([n]2cnc3c2nc(N)[nH]c3=O)O[C@H](CO)[C@H]1O | G | 0G | # | 28 |
2'-O-methylinosine | Im | Ш | 2000000909A | nucleoside | CO[C@H]1[C@H]([n]2cnc3c2nc[nH]c3=O)O[C@H](CO)[C@H]1O | A | 09A | ≤ | 128 |
2'-O-methylinosine-5'-monophosphate | pIm | Ш | 2000909551A | nucleotide | CO[C@@H]1[C@H](O)[C@@H](COP(=O)([O-])[O-])O[C@H]1[n]1cnc2c(=O)[nH]cnc12 | A | 09551A | 367 | |
2'-O-methylpseudouridine | Ym | Z | 2000000909U | nucleoside | CO[C@H]1[C@H](c2c[nH]c(=O)[nH]c2=O)O[C@H](CO)[C@H]1O | U | 09U | Ζ | 103 |
2'-O-methylpseudouridine-5'-monophosphate | pYm | Z | 2000909551U | nucleotide | CO[C@H]1[C@H](c2c[nH]c(=O)[nH]c2=O)O[C@H](COP(=O)([O-])[O-])[C@H]1O | U | 09551U | Z | 368 |
2'-O-methyluridine | Um | J | 2000000090U | nucleoside | CO[C@H]1[C@H]([n]2ccc(=O)[nH]c2=O)O[C@H](CO)[C@H]1O | U | 0U | J | 50 |
2'-O-methyluridine 5-oxyacetic acid methyl ester | mcmo5Um | Ͽ | 2000090503U | nucleoside | COC(COc1c[n]([C@@H]2O[C@H](CO)[C@@H](O)[C@H]2OC)c(=O)[nH]c1=O)=O | U | 0503U | Ͽ | 179 |
2'-O-methyluridine 5-oxyacetic acid methyl ester-5'-monophosphate | pmcmo5Um | Ͽ | 2090503551U | nucleotide | COC(=O)COc1c[n]([C@@H]2O[C@H](COP(=O)([O-])[O-])[C@@H](O)[C@H]2OC)c(=O)[nH]c1=O | U | 0503551U | 369 | |
2'-O-ribosyladenosine (phosphate) | Ar(p) | ʩ | 2000000000A | nucleoside | [O-]P(OC[C@H]1O[C@H]([C@@H]([C@@H]1O)O)O[C@@H]1[C@@H]([C@H](O[C@H]1[n]1c2[n]c[n]c(c2[n]c1)N)CO)O)(=O)[O-] | A | 00A | ^ | 20 |
2'-O-ribosylguanosine (phosphate) | Gr(p) | ℑ | 2000000900G | nucleoside | Nc1[nH]c(=O)c2c([n]([C@H]3[C@H](O[C@H]4[C@H](O)[C@H](O)[C@@H](COP(=O)([O-])[O-])O4)[C@H](O)[C@@H](CO)O3)cn2)n1 | G | 00G | ℑ | 34 |
2'-O-ribosylguanosine (phosphate)-5'-monophosphate | pGr(p) | ℑ | 2900255551G | nucleotide | Nc1nc(=O)c2c([n]([C@H]3[C@H](O[C@H]4[C@H](O)[C@H](O)[C@@H](COP(=O)([O-])[O-])O4)[C@H](O)[C@@H](COP(=O)([O-])[O-])O3)cn2)n1 | G | 00551G | ℑ | 370 |
2'3'-cyclic phosphate end | N2'3'cp | Ғ | 2000003377N | nucleotide | [O-]P([O-])(OC[C@H]1O[C@@H]%91[C@@H]2OP([O-])(O[C@H]12)=O)=O.[*]%91 | A | 3377N | 174 | |
2,8-dimethyladenosine | m2,8A | ± | 2000000028A | nucleoside | Cc1nc2c(N)nc(C)nc2[n]1[C@@H]1O[C@H](CO)[C@@H](O)[C@H]1O | A | 28A | ± | 136 |
2,8-dimethyladenosine-5'-monophosphate | pm2,8A | ± | 2000028551A | nucleotide | Cc1nc(N)c2nc(C)[n]([C@@H]3O[C@H](COP(=O)([O-])[O-])[C@@H](O)[C@H]3O)c2n1 | A | 28551A | 371 | |
2- methylthiomethylenethio-N6-isopentenyl-adenosine | msms2i6A | £ | 2000021161A | nucleoside | CC(C)=CCNc1nc(SCSC)nc2c1nc[n]2[C@@H]1O[C@H](CO)[C@@H](O)[C@H]1O | A | 21161A | £ | 182 |
2- methylthiomethylenethio-N6-isopentenyl-adenosine-5'-monophosphate | pmsms2i6A | £ | 2021161551A | nucleotide | CSCSc1nc(NCC=C(C)C)c2nc[n]([C@@H]3O[C@H](COP(=O)([O-])[O-])[C@@H](O)[C@H]3O)c2n1 | A | 21161551A | 372 | |
2-geranylthiouridine | ges2U | Γ | 2000000021U | nucleoside | CC(C)=CCC/C(/C)=C/CSc1nc(=O)cc[n]1[C@@H]1O[C@H](CO)[C@@H](O)[C@H]1O | U | 21U | Γ | 166 |
2-geranylthiouridine-5'-monophosphate | pges2U | Γ | 2000021551U | nucleotide | CC(C)=CCC/C(/C)=C/CSc1nc(=O)cc[n]1[C@@H]1O[C@H](COP(=O)([O-])[O-])[C@@H](O)[C@H]1O | U | 21551U | 373 | |
2-lysidine | k2C | } | 2000000021C | nucleoside | N[C@H](C(=O)O)CCCCN=c1[n]([C@H]2[C@H](O)[C@H](O)[C@@H](CO)O2)ccc(N)n1 | C | 21C | } | 101 |
2-lysidine-5'-monophosphate | pk2C | } | 2000021551C | nucleotide | Nc1cc[n]([C@@H]2O[C@H](COP(=O)([O-])[O-])[C@@H](O)[C@H]2O)c(=NCCCC[C@H](N)C(=O)O)n1 | C | 21551C | } | 346 |
2-methyladenosine | m2A | ɿ | 2000000002A | nucleoside | Cc1nc2c(nc[n]2[C@H]2[C@H](O)[C@H](O)[C@@H](CO)O2)c(N)n1 | A | 2A | / | 37 |
2-methyladenosine-5'-monophosphate | pm2A | ɿ | 2000002551A | nucleotide | Cc1nc2c(nc[n]2[C@H]2[C@H](O)[C@H](O)[C@@H](COP(=O)([O-])[O-])O2)c(N)n1 | A | 2551A | / | 219 |
2-methylthio cyclic N6-threonylcarbamoyladenosine | ms2ct6A | ÿ | 2000002164A | nucleoside | CSc1nc2c(nc[n]2[C@H]2[C@H](O)[C@H](O)[C@@H](CO)O2)c(C2C(=O)[C@H]([C@H](O)C)NC2=O)n1 | A | 2164A | ÿ | 180 |
2-methylthio cyclic N6-threonylcarbamoyladenosine-5'-monophosphate | pms2ct6A | ÿ | 2002164551A | nucleotide | CSc1nc(C2C(=O)N[C@@H]([C@@H](C)O)C2=O)c2nc[n]([C@@H]3O[C@H](COP(=O)([O-])[O-])[C@@H](O)[C@H]3O)c2n1 | A | 2164551A | 374 | |
2-methylthio-N6-(cis-hydroxyisopentenyl) adenosine | ms2io6A | ≠ | 2000002160A | nucleoside | CC(CO)=CCNc1nc(SC)nc2c1nc[n]2[C@@H]1O[C@H](CO)[C@@H](O)[C@H]1O | A | 2160A | ≠ | 126 |
2-methylthio-N6-(cis-hydroxyisopentenyl) adenosine-5'-monophosphate | pms2io6A | ≠ | 2002160551A | nucleotide | CSc1nc(NCC=C(C)CO)c2nc[n]([C@@H]3O[C@H](COP(=O)([O-])[O-])[C@@H](O)[C@H]3O)c2n1 | A | 2160551A | ≠ | 375 |
2-methylthio-N6-hydroxynorvalylcarbamoyladenosine | ms2hn6A | ≈ | 2000002163A | nucleoside | CCC(O)C(NC(Nc1nc(SC)nc2c1nc[n]2[C@@H]1O[C@H](CO)[C@@H](O)[C@H]1O)=O)C(O)=O | A | 2163A | ≈ | 79 |
2-methylthio-N6-hydroxynorvalylcarbamoyladenosine-5'-monophosphate | pms2hn6A | ≈ | 2002163551A | nucleotide | CCC(O)C(NC(=O)Nc1nc(SC)nc2c1nc[n]2[C@@H]1O[C@H](COP(=O)([O-])[O-])[C@@H](O)[C@H]1O)C(=O)O | A | 2163551A | 376 | |
2-methylthio-N6-isopentenyl-adenosine-5'-monophosphate | pms2i6A | * | 2002161551A | nucleotide | [O-]P(OC[C@H]1O[C@H]([C@H](O)[C@@H]1O)[n]1c[n]c2c1[n]c(SC)[n]c2NCC=C(C)C)(=O)[O-] | A | 2161551A | * | 240 |
2-methylthio-N6-isopentenyladenosine | ms2i6A | * | 2000002161A | nucleoside | CC(C)=CCNc1nc(SC)nc2c1nc[n]2[C@@H]1O[C@H](CO)[C@@H](O)[C@H]1O | A | 2161A | * | 51 |
2-methylthio-N6-methyladenosine | ms2m6A | ∞ | 2000000621A | nucleoside | CNc1nc(SC)nc2c1nc[n]2[C@@H]1O[C@H](CO)[C@@H](O)[C@H]1O | A | 621A | ∞ | 5 |
2-methylthio-N6-methyladenosine-5'-monophosphate | pms2m6A | ∞ | 2000621551A | nucleotide | CNc1nc(SC)nc2c1nc[n]2[C@@H]1O[C@H](COP(=O)([O-])[O-])[C@@H](O)[C@H]1O | A | 621551A | 377 | |
2-methylthio-N6-threonylcarbamoyladenosine | ms2t6A | [ | 2000002162A | nucleoside | CC(O)C(NC(Nc1nc(SC)nc2c1nc[n]2[C@@H]1O[C@H](CO)[C@@H](O)[C@H]1O)=O)C(O)=O | A | 2162A | [ | 55 |
2-methylthio-N6-threonylcarbamoyladenosine-5'-monophosphate | pms2t6A | [ | 2002162551A | nucleotide | CSc1nc(NC(=O)NC(C(=O)O)C(C)O)c2nc[n]([C@@H]3O[C@H](COP(=O)([O-])[O-])[C@@H](O)[C@H]3O)c2n1 | A | 2162551A | [ | 378 |
2-selenouridine | se2U | ω | 2000000020U | nucleoside | O[C@H]1[C@H]([n]2ccc(=O)[nH]c2=[Se])O[C@H](CO)[C@H]1O | U | 20U | ω | 94 |
2-thio-2'-O-methyluridine | s2Um | ∏ | 2000000902U | nucleoside | CO[C@H]1[C@H]([n]2ccc(=O)[nH]c2=S)O[C@H](CO)[C@H]1O | U | 02U | ∏ | 117 |
2-thio-2'-O-methyluridine-5'-monophosphate | ps2Um | ∏ | 2000902551U | nucleotide | CO[C@@H]1[C@H](O)[C@@H](COP(=O)([O-])[O-])O[C@H]1[n]1ccc(=O)[nH]c1=S | U | 02551U | ∏ | 379 |
2-thiocytidine | s2C | ʤ | 2000000002C | nucleoside | Nc1nc(=S)[n]([C@H]2[C@H](O)[C@H](O)[C@@H](CO)O2)cc1 | C | 2C | % | 92 |
2-thiocytidine-5'-monophosphate | ps2C | ʤ | 2000002551C | nucleotide | Nc1cc[n]([C@@H]2O[C@H](COP(=O)([O-])[O-])[C@@H](O)[C@H]2O)c(=S)n1 | C | 2551C | % | 347 |
2-thiouridine | s2U | 2 | 2000000002U | nucleoside | O[C@H]1[C@H]([n]2ccc(=O)[nH]c2=S)O[C@H](CO)[C@H]1O | U | 2U | 2 | 100 |
2N-methylguanosine-5'-monophosphate | pm2G | L | 2000002551G | nucleotide | CNc1nc2c(nc[n]2[C@@H]2O[C@H](COP(=O)([O-])[O-])[C@@H](O)[C@H]2O)c(=O)[nH]1 | G | 2551G | L | 191 |
3,2'-O-dimethyluridine | m3Um | σ | 2000000903U | nucleoside | C[n]1c(=O)cc[n]([C@@H]2O[C@H](CO)[C@@H](O)[C@H]2OC)c1=O | U | 03U | σ | 57 |
3,2'-O-dimethyluridine-5'-monophosphate | pm3Um | σ | 2000903551U | nucleotide | CO[C@@H]1[C@H](O)[C@@H](COP(=O)([O-])[O-])O[C@H]1[n]1ccc(=O)[n](C)c1=O | U | 03551U | 380 | |
3-(3-amino-3-carboxypropyl)-5,6-dihydrouridine | acp3D | Ð | 2000000308U | nucleoside | NC(CCN1C(=O)N([C@@H]2O[C@H](CO)[C@@H](O)[C@H]2O)CCC1=O)C(O)=O | U | 308U | Ð | 137 |
3-(3-amino-3-carboxypropyl)-5,6-dihydrouridine-5'-monophosphate | pacp3D | Ð | 2000308551U | nucleotide | NC(CCN1C(=O)CCN([C@@H]2O[C@H](COP(=O)([O-])[O-])[C@@H](O)[C@H]2O)C1=O)C(=O)O | U | 308551U | 381 | |
3-(3-amino-3-carboxypropyl)pseudouridine | acp3Y | Þ | 2000000309U | nucleoside | NC(C(=O)O)CC[n]1c(=O)c([C@H]2[C@H](O)[C@H](O)[C@@H](CO)O2)c[nH]c1=O | U | 309U | Þ | 138 |
3-(3-amino-3-carboxypropyl)pseudouridine-5'-monophosphate | pacp3Y | Þ | 2000309551U | nucleotide | NC(CC[n]1c(=O)[nH]cc([C@@H]2O[C@H](COP(=O)([O-])[O-])[C@@H](O)[C@H]2O)c1=O)C(=O)O | U | 1309551U | 348 | |
3-(3-amino-3-carboxypropyl)uridine | acp3U | X | 2000000030U | nucleoside | NC(CC[n]1c(=O)[n]([C@@H]2O[C@H](CO)[C@@H](O)[C@H]2O)ccc1=O)C(O)=O | U | 30U | X | 75 |
3-(3-amino-3-carboxypropyl)uridine-5'-monophosphate | pacp3U | X | 2000030551U | nucleotide | NC(CC[n]1c(=O)cc[n]([C@@H]2O[C@H](COP(=O)([O-])[O-])[C@@H](O)[C@H]2O)c1=O)C(=O)O | U | 30551U | 382 | |
3-methylcytidine | m3C | Щ | 2000000003C | nucleoside | C[n+]1c(N)cc[n]([C@@H]2O[C@H](CO)[C@@H](O)[C@H]2O)c1=O | C | 3C | ' | 52 |
3-Methylcytidine- 5'-monophosphate | pm3C | Щ | 2000003551C | nucleotide | C[n+]1c(=O)[n]([C@H]2[C@H](O)[C@H](O)[C@@H](COP(=O)([O-])[O-])O2)ccc1N | C | 3551C | ' | 299 |
3-methylpseudouridine | m3Y | Ƒ | 2000000039U | nucleoside | C[n]1c(=O)c([C@H]2[C@H](O)[C@H](O)[C@@H](CO)O2)c[nH]c1=O | U | 39U | Κ | 48 |
3-methylpseudouridine-5'-monophosphate | pm3Y | Ƒ | 2000039551U | nucleotide | C[n]1c(=O)[nH]cc([C@@H]2O[C@H](COP(=O)([O-])[O-])[C@@H](O)[C@H]2O)c1=O | U | 39551U | Κ | 349 |
3-methyluridine | m3U | δ | 2000000003U | nucleoside | C[n]1c(=O)[n]([C@@H]2O[C@H](CO)[C@@H](O)[C@H]2O)ccc1=O | U | 3U | δ | 49 |
3-methyluridine-5'-monophosphate | pm3U | δ | 2000003551U | nucleotide | C[n]1c(=O)cc[n]([C@@H]2O[C@H](COP(=O)([O-])[O-])[C@@H](O)[C@H]2O)c1=O | U | 3551U | 199 | |
4-demethylwyosine | imG-14 | † | 2000000004G | nucleoside | Cc1c[n]2c(c3nc[n]([C@@H]4O[C@H](CO)[C@@H](O)[C@H]4O)c3[nH]c2n1)=O | G | 4G | † | 108 |
4-demethylwyosine-5'-monophosphate | pimG-14 | † | 2000004551G | nucleotide | Cc1c[n]2c(=O)c3nc[n]([C@@H]4O[C@H](COP(=O)([O-])[O-])[C@@H](O)[C@H]4O)c3[nH]c2n1 | G | 4551G | 383 | |
4-methyl, cytidine-5'-monophosphate | pm4C | ν | 2000004551C | nucleotide | CNc1nc(=O)[n]([C@H]2[C@H](O)[C@H](O)[C@@H](COP(=O)([O-])[O-])O2)cc1 | C | 4551C | 281 | |
4-thiouridine | s4U | 4 | 2000000074U | nucleoside | OC[C@H]1O[C@@H]([n]2ccc(=S)[nH]c2=O)[C@H](O)[C@@H]1O | U | 74U | 4 | 7 |
4-thiouridine-5'-monophosphate | ps4U | 4 | 2000074551U | nucleotide | O=c1[nH]c(=S)cc[n]1[C@@H]1O[C@H](COP(=O)([O-])[O-])[C@@H](O)[C@H]1O | U | 74551U | 4 | 216 |
4N,O2'-methylcytidine-5'-monophosphate | pm4Cm | λ | 2000904551C | nucleotide | CNc1cc[n]([C@@H]2O[C@H](COP(=O)([O-])[O-])[C@@H](O)[C@H]2OC)c(=O)n1 | C | 04551C | Λ | 208 |
5' (3' -dephospho-CoA) | CoApN | ♠ | 2000000455N | nucleotide | CC(C)(COP([O-])(OP([O-])(OC[C@H]1O[C@@H]([n]2cnc3c(N)ncnc23)[C@H](O)[C@@H]1OP([O-])(OC[C@H]1O[C@@H]%91[C@H](O)[C@@H]1O)=O)=O)=O)C(O)C(NCCC(NCCS)=O)=O.[*]%91 | A | 455N | ♠ | 149 |
5' (3' -dephosphoacetyl-CoA) | acCoApN | ♣ | 2000004155N | nucleotide | CC(SCCNC(CCNC(C(O)C(C)(C)COP([O-])(OP([O-])(OC[C@H]1O[C@@H]([n]2cnc3c(N)ncnc23)[C@H](O)[C@@H]1OP([O-])(OC[C@H]1O[C@@H]%91[C@H](O)[C@@H]1O)=O)=O)=O)=O)=O)=O.[*]%91 | A | 4155N | ♣ | 150 |
5' (3' -dephosphomalonyl-CoA) | malonyl-CoApN | ♥ | 2000004255N | nucleotide | CC(C)(COP([O-])(OP([O-])(OC[C@H]1O[C@@H]([n]2cnc3c(N)ncnc23)[C@H](O)[C@@H]1OP([O-])(OC[C@H]1O[C@@H]%91[C@H](O)[C@@H]1O)=O)=O)=O)C(O)C(NCCC(NCCSC(CC(O)=O)=O)=O)=O.[*]%91 | A | 4255N | ♥ | 151 |
5' (3' -dephosphosuccinyl-CoA) | succinyl-CoApN | ♦ | 2000004355N | nucleotide | CC(C)(COP([O-])(OP([O-])(OC[C@H]1O[C@@H]([n]2cnc3c(N)ncnc23)[C@H](O)[C@@H]1OP([O-])(OC[C@H]1O[C@@H]%91[C@H](O)[C@@H]1O)=O)=O)=O)C(O)C(NCCC(NCCSC(CCC(O)=O)=O)=O)=O.[*]%91 | A | 4355N | ♦ | 152 |
5' diphosphate end | ppN | ϒ | 2000000552N | nucleotide | O[C@H]1[C@H]%91O[C@H](COP(OP(=O)([O-])[O-])(=O)[O-])[C@H]1O.[*]%91 | A | 552N | ϒ | 153 |
5' hydroxyl end | 5'-OH-N | ɀ | 2000000550N | nucleoside | A | 550N | 173 | ||
5' nicotinamide adenine dinucleotide | NADpN | Ξ | 2000000255N | nucleotide | NC(c1ccc[n+]([C@@H]2O[C@H](COP([O-])(OP([O-])(OC[C@H]3O[C@@H]([n]4cnc5c(N)ncnc45)[C@H](O)[C@@H]3OP([O-])(OC[C@H]3O[C@@H]%91[C@H](O)[C@@H]3O)=O)=O)=O)[C@@H](O)[C@H]2O)c1)=O.[*]%91 | A | 255N | Ξ | 154 |
5' triphosphate end | pppN | ϖ | 2000000553N | nucleotide | O[C@@H]1[C@H](O)[C@@H](COP([O-])(OP([O-])(OP([O-])([O-])=O)=O)=O)O[C@@H]%911.[*]%91 | A | 553N | ϖ | 147 |
5,2'-O-dimethylcytidine | m5Cm | τ | 2000000905C | nucleoside | CO[C@H]1[C@H]([n]2c(=O)nc(N)c(C)c2)O[C@H](CO)[C@H]1O | C | 05C | τ | 2 |
5,2'-O-dimethylcytidine-5'-monophosphate | pm5Cm | τ | 2000905551C | nucleotide | CO[C@@H]1[C@H](O)[C@@H](COP(=O)([O-])[O-])O[C@H]1[n]1cc(C)c(N)nc1=O | C | 05551C | 350 | |
5,2'-O-dimethyluridine | m5Um | Ħ | 2000000905U | nucleoside | CO[C@H]1[C@H]([n]2c(=O)[nH]c(=O)c(C)c2)O[C@H](CO)[C@H]1O | U | 05U | \ | 122 |
5,6-dihydrouridine-5'-monophosphate | pD | D | 2000008551U | nucleotide | [O-]P(OC[C@H]1O[C@H]([C@H](O)[C@@H]1O)N1C(NC(=O)CC1)=O)(=O)[O-] | U | 8551U | D | 190 |
5-(carboxyhydroxymethyl)-2'-O-methyluridine methyl ester | mchm5Um | b | 2000090522U | nucleoside | COC(C(O)c1c[n]([C@@H]2O[C@H](CO)[C@@H](O)[C@H]2OC)c(=O)[nH]c1=O)=O | U | 0522U | b | 164 |
5-(carboxyhydroxymethyl)-2'-O-methyluridine methyl ester-5'-monophosphate | pmchm5Um | b | 2090522551U | nucleotide | COC(=O)C(O)c1c[n]([C@@H]2O[C@H](COP(=O)([O-])[O-])[C@@H](O)[C@H]2OC)c(=O)[nH]c1=O | U | 0522551U | 384 | |
5-(carboxyhydroxymethyl)uridine methyl ester | mchm5U | ɮ | 2000000522U | nucleoside | COC(C(c1c(=O)[nH]c(=O)[n]([C@H]2[C@H](O)[C@H](O)[C@@H](CO)O2)c1)O)=O | U | 522U | , | 85 |
5-(carboxyhydroxymethyl)uridine methyl ester-5'-monophosphate | pmchm5U | ɮ | 2000522551U | nucleotide | COC(=O)C(O)c1c[n]([C@@H]2O[C@H](COP(=O)([O-])[O-])[C@@H](O)[C@H]2O)c(=O)[nH]c1=O | U | 522551U | , | 351 |
5-(carboxymethoxy) uridine-5'-monophosphate | pcmo5U | V | 2000502551U | nucleotide | O[C@@H]1[C@@H](COP(=O)([O-])[O-])O[C@@H]([n]2c(=O)[nH]c(=O)c(OCC(=O)O)c2)[C@@H]1O | U | 502551U | V | 241 |
5-(hydroxymethyl)cytidine 5'-(dihydrogen phosphate) | phm5C | Ƣ | 2000051551C | nucleotide | Nc1nc(=O)[n]([C@@H]2O[C@H](COP(=O)([O-])[O-])[C@@H](O)[C@H]2O)cc1CO | C | 51551C | 254 | |
5-(isopentenylaminomethyl)-2'-O-methyluridine | inm5Um | Ю | 2000090583U | nucleoside | CO[C@H]1[C@H]([n]2c(=O)[nH]c(=O)c(CNCC=C(C)C)c2)O[C@H](CO)[C@H]1O | U | 0583U | ¼ | 145 |
5-(isopentenylaminomethyl)-2'-O-methyluridine-5'-monophosphate | pinm5Um | Ю | 2090583551U | nucleotide | CO[C@@H]1[C@H](O)[C@@H](COP(=O)([O-])[O-])O[C@H]1[n]1cc(CNCC=C(C)C)c(=O)[nH]c1=O | U | 0583551U | ¼ | 352 |
5-(isopentenylaminomethyl)-2-thiouridine | inm5s2U | Ɲ | 2000002583U | nucleoside | CC(=CCNCc1c(=O)[nH]c(=S)[n]([C@H]2[C@H](O)[C@H](O)[C@@H](CO)O2)c1)C | U | 2583U | ½ | 146 |
5-(isopentenylaminomethyl)-2-thiouridine-5'-monophosphate | pinm5s2U | Ɲ | 2002583551U | nucleotide | CC(C)=CCNCc1c[n]([C@@H]2O[C@H](COP(=O)([O-])[O-])[C@@H](O)[C@H]2O)c(=S)[nH]c1=O | U | 2583551U | 353 | |
5-(isopentenylaminomethyl)uridine | inm5U | ¾ | 2000000583U | nucleoside | CC(=CCNCc1c(=O)[nH]c(=O)[n]([C@H]2[C@H](O)[C@H](O)[C@@H](CO)O2)c1)C | U | 583U | ¾ | 144 |
5-(isopentenylaminomethyl)uridine-5'-monophosphate | pinm5U | ¾ | 2000583551U | nucleotide | CC(C)=CCNCc1c[n]([C@@H]2O[C@H](COP(=O)([O-])[O-])[C@@H](O)[C@H]2O)c(=O)[nH]c1=O | U | 583551U | 354 | |
5-(O-methylaceto)-2-thio-2-deoxy-uridine-5'-monophosphate | pmcm5s2U | 3 | 2002521551U | nucleotide | COC(=O)Cc1c[n]([C@@H]2O[C@H](COP(=O)([O-])[O-])[C@@H](O)[C@H]2O)c(=S)[nH]c1=O | U | 2521551U | 3 | 223 |
5-aminomethyl-2-geranylthiouridine | nm5ges2U | Δ | 2000021510U | nucleoside | CC(C)=CCC/C(/C)=C/CSc1nc(=O)c(CN)c[n]1[C@@H]1O[C@H](CO)[C@@H](O)[C@H]1O | U | 21510U | Δ | 169 |
5-aminomethyl-2-geranylthiouridine-5'-monophosphate | pnm5ges2U | Δ | 2021510551U | nucleotide | CC(C)=CCC/C(/C)=C/CSc1nc(=O)c(CN)c[n]1[C@@H]1O[C@H](COP(=O)([O-])[O-])[C@@H](O)[C@H]1O | U | 21510551U | Δ | 385 |
5-aminomethyl-2-selenouridine | nm5se2U | π | 2000020510U | nucleoside | NCc1c[n]([C@@H]2O[C@H](CO)[C@@H](O)[C@H]2O)c(=[Se])[nH]c1=O | U | 20510U | π | 62 |
5-aminomethyl-2-selenouridine-5'-monophosphate | pnm5se2U | π | 2020510551U | nucleotide | NCc1c[n]([C@@H]2O[C@H](COP(=O)([O-])[O-])[C@@H](O)[C@H]2O)c(=[Se])[nH]c1=O | U | 20510551U | π | 386 |
5-aminomethyl-2-thiouridine | nm5s2U | ∫ | 2000002510U | nucleoside | NCc1c[n]([C@@H]2O[C@H](CO)[C@@H](O)[C@H]2O)c(=S)[nH]c1=O | U | 2510U | ∫ | 35 |
5-aminomethyl-2-thiouridine-5'-monophosphate | pnm5s2U | ∫ | 2002510551U | nucleotide | NCc1c[n]([C@@H]2O[C@H](COP(=O)([O-])[O-])[C@@H](O)[C@H]2O)c(=S)[nH]c1=O | U | 2510551U | ∫ | 387 |
5-aminomethyluridine | nm5U | ∪ | 2000000510C | nucleoside | NCc1c(=O)[nH]c(=O)[n]([C@H]2[C@H](O)[C@H](O)[C@@H](CO)O2)c1 | U | 510U | ∪ | 115 |
5-aminomethyluridine-5'-monophosphate | pnm5U | ∪ | 2000510551U | nucleotide | NCc1c[n]([C@@H]2O[C@H](COP(=O)([O-])[O-])[C@@H](O)[C@H]2O)c(=O)[nH]c1=O | U | 510551U | ∪ | 355 |
5-carbamoylhydroxymethyluridine | nchm5U | r | 2000000531U | nucleoside | NC(C(O)c1c[n]([C@@H]2O[C@H](CO)[C@@H](O)[C@H]2O)c(=O)[nH]c1=O)=O | U | 531U | r | 163 |
5-carbamoylhydroxymethyluridine-5'-monophosphate | pnchm5U | r | 2000531551U | nucleotide | NC(=O)C(O)c1c[n]([C@@H]2O[C@H](COP(=O)([O-])[O-])[C@@H](O)[C@H]2O)c(=O)[nH]c1=O | U | 531551U | 388 | |
5-carbamoylmethyl-2'-O-methyluridine | ncm5Um | ~ | 2000009053U | nucleoside | CO[C@H]1[C@H]([n]2cc(CC(N)=O)c(=O)[nH]c2=O)O[C@H](CO)[C@H]1O | U | 053U | ~ | 29 |
5-carbamoylmethyl-2'-O-methyluridine-5'-monophosphate | pncm5Um | ~ | 2009053551U | nucleotide | CO[C@@H]1[C@H](O)[C@@H](COP(=O)([O-])[O-])O[C@H]1[n]1cc(CC(N)=O)c(=O)[nH]c1=O | U | 053551U | 389 | |
5-carbamoylmethyl-2-thiouridine | ncm5s2U | l | 2000000253U | nucleoside | NC(Cc1c[n]([C@@H]2O[C@H](CO)[C@@H](O)[C@H]2O)c(=S)[nH]c1=O)=O | U | 253U | l | 162 |
5-carbamoylmethyl-2-thiouridine-5'-monophosphate | pncm5s2U | l | 2000253551U | nucleotide | NC(=O)Cc1c[n]([C@@H]2O[C@H](COP(=O)([O-])[O-])[C@@H](O)[C@H]2O)c(=S)[nH]c1=O | U | 253551U | l | 390 |
5-carbamoylmethyluridine | ncm5U | & | 2000000053U | nucleoside | NC(Cc1c(=O)[nH]c(=O)[n]([C@H]2[C@H](O)[C@H](O)[C@@H](CO)O2)c1)=O | U | 53U | & | 43 |
5-carbamoylmethyluridine-5'-monophosphate | pncm5U | & | 2000053551U | nucleotide | NC(=O)Cc1c[n]([C@@H]2O[C@H](COP(=O)([O-])[O-])[C@@H](O)[C@H]2O)c(=O)[nH]c1=O | U | 53551U | & | 356 |
5-carboxyhydroxymethyluridine | chm5U | ≥ | 2000000520U | nucleoside | OC[C@@H]1[C@@H](O)[C@@H](O)[C@H]([n]2c(=O)[nH]c(=O)c(C(C(=O)O)O)c2)O1 | U | 520U | ≥ | 73 |
5-carboxyhydroxymethyluridine-5'-monophosphate | pchm5U | ≥ | 2000520551U | nucleotide | O=C(O)C(O)c1c[n]([C@@H]2O[C@H](COP(=O)([O-])[O-])[C@@H](O)[C@H]2O)c(=O)[nH]c1=O | U | 520551U | ≥ | 357 |
5-carboxymethyl-2-thiouridine | cm5s2U | ℘ | 2000002540U | nucleoside | OC(Cc1c[n]([C@@H]2O[C@H](CO)[C@@H](O)[C@H]2O)c(=S)[nH]c1=O)=O | U | 2540U | ℘ | 11 |
5-carboxymethyl-2-thiouridine-5'-monophosphate | pcm5s2U | ℘ | 2002540551U | nucleotide | O=C(O)Cc1c[n]([C@@H]2O[C@H](COP(=O)([O-])[O-])[C@@H](O)[C@H]2O)c(=S)[nH]c1=O | U | 2540551U | ℘ | 391 |
5-carboxymethylaminomethyl-2'-O-methyluridine | cmnm5Um | ) | 2000009051U | nucleoside | CO[C@H]1[C@H]([n]2cc(CNCC(O)=O)c(=O)[nH]c2=O)O[C@H](CO)[C@H]1O | U | 051U | ) | 23 |
5-carboxymethylaminomethyl-2'-O-methyluridine-5'-monophosphate | pcmnm5Um | ) | 2009051551U | nucleotide | CO[C@@H]1[C@H](O)[C@@H](COP(=O)([O-])[O-])O[C@H]1[n]1cc(CNCC(=O)O)c(=O)[nH]c1=O | U | 051551U | ) | 392 |
5-carboxymethylaminomethyl-2-geranylthiouridine | cmnm5ges2U | f | 2000002151U | nucleoside | CC(C)=CCC/C(/C)=C/CSc1nc(=O)c(CNCC(O)=O)c[n]1[C@@H]1O[C@H](CO)[C@@H](O)[C@H]1O | U | 2151U | f | 167 |
5-carboxymethylaminomethyl-2-geranylthiouridine-5'-monophosphate | pcmnm5ges2U | f | 2002151551U | nucleotide | CC(C)=CCC/C(/C)=C/CSc1nc(=O)c(CNCC(=O)O)c[n]1[C@@H]1O[C@H](COP(=O)([O-])[O-])[C@@H](O)[C@H]1O | U | 2151551U | f | 393 |
5-carboxymethylaminomethyl-2-selenouridine | cmnm5se2U | ⊥ | 2000002051U | nucleoside | OC(CNCc1c[n]([C@@H]2O[C@H](CO)[C@@H](O)[C@H]2O)c(=[Se])[nH]c1=O)=O | U | 2051U | ⊥ | 54 |
5-carboxymethylaminomethyl-2-selenouridine-5'-monophosphate | pcmnm5se2U | ⊥ | 2002051551U | nucleotide | O=C(O)CNCc1c[n]([C@@H]2O[C@H](COP(=O)([O-])[O-])[C@@H](O)[C@H]2O)c(=[Se])[nH]c1=O | U | 2051551U | ⊥ | 394 |
5-carboxymethylaminomethyl-2-thiouridine | cmnm5s2U | $ | 2000000251U | nucleoside | OC(CNCc1c[n]([C@@H]2O[C@H](CO)[C@@H](O)[C@H]2O)c(=S)[nH]c1=O)=O | U | 251U | $ | 45 |
5-carboxymethylaminomethyl-2-thiouridine-5'-monophosphate | pcmnm5s2U | $ | 2000251551U | nucleotide | O=C(O)CNCc1c[n]([C@@H]2O[C@H](COP(=O)([O-])[O-])[C@@H](O)[C@H]2O)c(=S)[nH]c1=O | U | 251551U | $ | 395 |
5-carboxymethylaminomethyluridine | cmnm5U | ! | 2000000051U | nucleoside | OC[C@@H]1[C@@H](O)[C@@H](O)[C@H]([n]2c(=O)[nH]c(=O)c(CNCC(=O)O)c2)O1 | U | 51U | ! | 87 |
5-carboxymethylaminomethyluridine-5'-monophosphate | pcmnm5U | ! | 2000051551U | nucleotide | O=C(O)CNCc1c[n]([C@@H]2O[C@H](COP(=O)([O-])[O-])[C@@H](O)[C@H]2O)c(=O)[nH]c1=O | U | 51551U | ! | 358 |
5-carboxymethyluridine | cm5U | ◊ | 2000000052U | nucleoside | OC[C@@H]1[C@@H](O)[C@@H](O)[C@H]([n]2c(=O)[nH]c(=O)c(CC(=O)O)c2)O1 | U | 52U | ◊ | 44 |
5-carboxymethyluridine-5'-monophosphate | pcm5U | ◊ | 2000052551U | nucleotide | O=C(O)Cc1c[n]([C@@H]2O[C@H](COP(=O)([O-])[O-])[C@@H](O)[C@H]2O)c(=O)[nH]c1=O | U | 52551U | ◊ | 359 |
5-cyanomethyluridine | cnm5U | Ѷ | 2000000055U | nucleoside | N#CCc1c[n]([C@@H]2O[C@H](CO)[C@@H](O)[C@H]2O)c(=O)[nH]c1=O | U | 55U | Ѷ | 178 |
5-cyanomethyluridine-5'-monophosphate | pcnm5U | Ѷ | 2000055551U | nucleotide | N#CCc1c[n]([C@@H]2O[C@H](COP(=O)([O-])[O-])[C@@H](O)[C@H]2O)c(=O)[nH]c1=O | U | 55551U | Ѷ | 396 |
5-formyl-2'-O-methylcytidine | f5Cm | ° | 2000009071C | nucleoside | CO[C@H]1[C@H]([n]2cc(C=O)c(N)nc2=O)O[C@H](CO)[C@H]1O | C | 071C | ° | 104 |
5-formyl-2'-O-methylcytidine-5'-monophosphate | pf5Cm | ° | 2009071551C | nucleotide | CO[C@@H]1[C@H](O)[C@@H](COP(=O)([O-])[O-])O[C@H]1[n]1cc(C=O)c(N)nc1=O | C | 071551C | ° | 397 |
5-formylcytidine | f5C | > | 2000000071C | nucleoside | Nc1nc(=O)[n]([C@@H]2O[C@H](CO)[C@@H](O)[C@H]2O)cc1C=O | C | 71C | > | 31 |
5-formylcytidine 5'-(dihydrogen phosphate) | pf5C | > | 2000071551C | nucleotide | Nc1nc(=O)[n]([C@@H]2O[C@H](COP(=O)([O-])[O-])[C@@H](O)[C@H]2O)cc1C=O | C | 71551C | > | 232 |
5-hydroxycytidine | ho5C | Ç | 2000000050C | nucleoside | Nc1nc(=O)[n]([C@@H]2O[C@H](CO)[C@@H](O)[C@H]2O)cc1O | C | 50C | Ç | 143 |
5-hydroxycytidine-5'-monophosphate | pho5C | Ç | 2000050551C | nucleotide | Nc1nc(=O)[n]([C@@H]2O[C@H](COP(=O)([O-])[O-])[C@@H](O)[C@H]2O)cc1O | C | 50551C | Ç | 398 |
5-hydroxymethylcytidine | hm5C | Ƣ | 2000000051C | nucleoside | Nc1nc(=O)[n]([C@@H]2O[C@H](CO)[C@@H](O)[C@H]2O)cc1CO | C | 51C | ∅ | 119 |
5-hydroxyuridine | ho5U | ∝ | 2000000050U | nucleoside | OC[C@@H]1[C@@H](O)[C@@H](O)[C@H]([n]2c(=O)[nH]c(=O)c(O)c2)O1 | U | 50U | ∝ | 64 |
5-hydroxyuridine-5'-monophosphate | pho5U | ∝ | 2000050551U | nucleotide | O=c1[nH]c(=O)[n]([C@@H]2O[C@H](COP(=O)([O-])[O-])[C@@H](O)[C@H]2O)cc1O | U | 50551U | 360 | |
5-methoxycarbonylmethyl-2'-O-methyluridine | mcm5Um | ∩ | 2000090521U | nucleoside | CO[C@H]1[C@H]([n]2c(=O)[nH]c(=O)c(CC(OC)=O)c2)O[C@H](CO)[C@H]1O | U | 0521U | ∩ | 80 |
5-methoxycarbonylmethyl-2'-O-methyluridine-5'-monophosphate | pmcm5Um | ∩ | 2090521551U | nucleotide | COC(=O)Cc1c[n]([C@@H]2O[C@H](COP(=O)([O-])[O-])[C@@H](O)[C@H]2OC)c(=O)[nH]c1=O | U | 0521551U | ∩ | 361 |
5-methoxycarbonylmethyl-2-thiouridine | mcm5s2U | 3 | 2000002521U | nucleoside | COC(Cc1c[n]([C@@H]2O[C@H](CO)[C@@H](O)[C@H]2O)c(=S)[nH]c1=O)=O | U | 2521U | 3 | 68 |
5-methoxycarbonylmethyluridine | mcm5U | 1 | 2000000521U | nucleoside | COC(Cc1c(=O)[nH]c(=O)[n]([C@H]2[C@H](O)[C@H](O)[C@@H](CO)O2)c1)=O | U | 521U | 1 | 27 |
5-methoxycarbonylmethyluridine-5'-monophosphate | pmcm5U | 1 | 2000521551U | nucleotide | COC(=O)Cc1c[n]([C@@H]2O[C@H](COP(=O)([O-])[O-])[C@@H](O)[C@H]2O)c(=O)[nH]c1=O | U | 521551U | 1 | 362 |
5-methoxyuridine | mo5U | 5 | 2000000501U | nucleoside | COc1c(=O)[nH]c(=O)[n]([C@H]2[C@H](O)[C@H](O)[C@@H](CO)O2)c1 | U | 501U | 5 | 74 |
5-methoxyuridine-5'-monophosphate | pmo5U | 5 | 2000501551U | nucleotide | COc1c[n]([C@@H]2O[C@H](COP(=O)([O-])[O-])[C@@H](O)[C@H]2O)c(=O)[nH]c1=O | U | 501551U | 5 | 363 |
5-methyl-2-thiouridine | m5s2U | F | 2000000025U | nucleoside | Cc1c[n]([C@@H]2O[C@H](CO)[C@@H](O)[C@H]2O)c(=S)[nH]c1=O | U | 25U | F | 3 |
5-methyl-2-thiouridine-5'-monophosphate | pm5s2U | F | 2000025551U | nucleotide | Cc1c[n]([C@@H]2O[C@H](COP(=O)([O-])[O-])[C@@H](O)[C@H]2O)c(=S)[nH]c1=O | U | 25551U | F | 399 |
5-methylaminomethyl-2-geranylthiouridine | mnm5ges2U | h | 2000021511U | nucleoside | CC(C)=CCC/C(/C)=C/CSc1nc(=O)c(CNC)c[n]1[C@@H]1O[C@H](CO)[C@@H](O)[C@H]1O | U | 21511U | h | 168 |
5-methylaminomethyl-2-geranylthiouridine-5'-monophosphate | pmnm5ges2U | h | 2021511551U | nucleotide | CNCc1c[n]([C@@H]2O[C@H](COP(=O)([O-])[O-])[C@@H](O)[C@H]2O)c(SC/C=C(\C)/CCC=C(C)C)nc1=O | U | 21511551U | 400 | |
5-methylaminomethyl-2-selenouridine | mnm5se2U | ≅ | 2000020511U | nucleoside | CNCc1c[n]([C@@H]2O[C@H](CO)[C@@H](O)[C@H]2O)c(=[Se])[nH]c1=O | U | 20511U | ≅ | 78 |
5-methylaminomethyl-2-selenouridine-5'-monophosphate | pmnm5se2U | ≅ | 2020511551U | nucleotide | CNCc1c[n]([C@@H]2O[C@H](COP(=O)([O-])[O-])[C@@H](O)[C@H]2O)c(=[Se])[nH]c1=O | U | 20511551U | 401 | |
5-methylaminomethyl-2-thiouridine | mnm5s2U | S | 2000002511U | nucleoside | CNCc1c[n]([C@@H]2O[C@H](CO)[C@@H](O)[C@H]2O)c(=S)[nH]c1=O | U | 2511U | S | 110 |
5-methylaminomethyl-2-thiouridine-5'-monophosphate | pmnm5s2U | S | 2002511551U | nucleotide | CNCc1c[n]([C@@H]2O[C@H](COP(=O)([O-])[O-])[C@@H](O)[C@H]2O)c(=S)[nH]c1=O | U | 2511551U | S | 402 |
5-methylaminomethyluridine | mnm5U | { | 2000000511U | nucleoside | CNCc1c(=O)[nH]c(=O)[n]([C@H]2[C@H](O)[C@H](O)[C@@H](CO)O2)c1 | U | 511U | { | 129 |
5-methylcytidine | m5C | ? | 2000000005C | nucleoside | Cc1c(N)nc(=O)[n]([C@H]2[C@H](O)[C@H](O)[C@@H](CO)O2)c1 | C | 5C | ? | 18 |
5-methylcytidine-5'-monophosphate | pm5C | ? | 2000005551C | nucleotide | Cc1c(N)nc(=O)[n]([C@H]2[C@H](O)[C@H](O)[C@@H](COP(=O)([O-])[O-])O2)c1 | C | 5551C | ? | 186 |
5-methyldihydrouridine | m5D | ρ | 2000000058U | nucleoside | CC1C(=O)NC(=O)N([C@H]2[C@H](O)[C@H](O)[C@@H](CO)O2)C1 | U | 58U | ρ | 17 |
5-methyldihydrouridine-5'-monophosphate | pm5D | ρ | 2000058551U | nucleotide | CC1CN([C@@H]2O[C@H](COP(=O)([O-])[O-])[C@@H](O)[C@H]2O)C(=O)NC1=O | U | 58551U | 364 | |
5-methyluridine | m5U | T | 2000000005U | nucleoside | Cc1c(=O)[nH]c(=O)[n]([C@H]2[C@H](O)[C@H](O)[C@@H](CO)O2)c1 | U | 5U | T | 12 |
5-methyluridine-5'-monophosphate | pm5U | T | 2000005551U | nucleotide | [C@H]1([n]2cc(C)c(=O)nc2=O)[C@H](O)[C@H](O)[C@@H](COP([O-])([O-])=O)O1 | U | 5551U | T | 194 |
5-taurinomethyl-2-thiouridine | tm5s2U | ƕ | 2000000254U | nucleoside | OC[C@H]1O[C@@H]([n]2cc(CNCCS(O)(=O)=O)c(=O)[nH]c2=S)[C@H](O)[C@@H]1O | U | 254U | ∃ | 91 |
5-taurinomethyl-2-thiouridine-5'-monophosphate | ptm5s2U | ƕ | 2000254551U | nucleotide | O=c1[nH]c(=S)[n]([C@@H]2O[C@H](COP(=O)([O-])[O-])[C@@H](O)[C@H]2O)cc1CNCCS(=O)(=O)O | U | 254551U | ∃ | 403 |
5-taurinomethyluridine | tm5U | ʭ | 2000000054U | nucleoside | OC[C@H]1O[C@@H]([n]2cc(CNCCS(O)(=O)=O)c(=O)[nH]c2=O)[C@H](O)[C@@H]1O | U | 54U | Ê | 21 |
5-taurinomethyluridine-5'-monophosphate | ptm5U | ʭ | 2000054551U | nucleotide | O=c1[nH]c(=O)[n]([C@@H]2O[C@H](COP(=O)([O-])[O-])[C@@H](O)[C@H]2O)cc1CNCCS(=O)(=O)O | U | 54551U | Ê | 404 |
6N-dimethyladenosine-5'-monophosphate | pm6,6A | ζ | 2000066551A | nucleotide | [O-]P(OC[C@H]1O[C@H]([C@H](O)[C@@H]1O)[n]1c[n]c2c1[n]c[n]c2N(C)C)(=O)[O-] | A | 66551A | 192 | |
7-aminocarboxypropyl-demethylwyosine | yW-86 | ¥ | 2000000047C | nucleoside | Cc1nc2[nH]c3c(c(=O)[n]2c1CCC(N)C(O)=O)nc[n]3[C@@H]1O[C@H](CO)[C@@H](O)[C@H]1O | G | 47G | ¥ | 71 |
7-aminocarboxypropyl-demethylwyosine-5'-monophosphate | pyW-86 | ¥ | 2000047551G | nucleotide | Cc1nc2[nH]c3c(c(=O)[n]2c1CCC(N)C(=O)O)nc[n]3[C@@H]1O[C@H](COP(=O)([O-])[O-])[C@@H](O)[C@H]1O | G | 47551G | 405 | |
7-aminocarboxypropylwyosine | yW-72 | Ω | 2000000347G | nucleoside | C[n]1c2c(nc[n]2[C@@H]2O[C@H](CO)[C@@H](O)[C@H]2O)c(=O)[n]2c1nc(C)c2CCC(N)C(O)=O | G | 347G | Ω | 77 |
7-aminocarboxypropylwyosine methyl ester | yW-58 | ⇑ | 2000000348G | nucleoside | C[n]1c2nc(C)c(CCC(N)C(OC)=O)[n]2c(=O)c2nc[n]([C@@H]3O[C@H](CO)[C@@H](O)[C@H]3O)c12 | G | 348G | ⇑ | 112 |
7-aminocarboxypropylwyosine methyl ester-5'-monophosphate | pyW-58 | ⇑ | 2000348551G | nucleotide | COC(=O)C(N)CCc1c(C)nc2[n](C)c3c(c(=O)[n]12)nc[n]3[C@@H]1O[C@H](COP(=O)([O-])[O-])[C@@H](O)[C@H]1O | G | 348551G | 407 | |
7-aminocarboxypropylwyosine-5'-monophosphate | pyW-72 | Ω | 2000347551G | nucleotide | Cc1nc2[n](C)c3c(c(=O)[n]2c1CCC(N)C(=O)O)nc[n]3[C@@H]1O[C@H](COP(=O)([O-])[O-])[C@@H](O)[C@H]1O | G | 347551G | 406 | |
7-aminomethyl-7-carbaguanine | preQ1base | ∇ | 2000101000G | base | Nc1[nH]c(=O)c2c([nH]cc2CN)n1 | G | 101000G | ∇ | 61 |
7-aminomethyl-7-deazaguanosine | preQ1 | ∉ | 2000000101G | nucleoside | Nc1[nH]c(=O)c2c(CN)c[n]([C@@H]3O[C@H](CO)[C@@H](O)[C@H]3O)c2n1 | G | 101G | ∉ | 123 |
7-aminomethyl-7-deazaguanosine-5'-monophosphate | ppreQ1 | ∉ | 2000101551G | nucleotide | NCc1c[n]([C@@H]2O[C@H](COP(=O)([O-])[O-])[C@@H](O)[C@H]2O)c2nc(N)[nH]c(=O)c12 | G | 101551G | 408 | |
7-cyano-7-carbaguanine | preQ0base | ψ | 200100000G | base | Nc1[nH]c(=O)c2c(c[nH]c2n1)C#N | G | 100000G | ψ | 95 |
7-cyano-7-deazaguanosine | preQ0 | φ | 2000000100G | nucleoside | Nc1[nH]c(=O)c2c(c[n]([C@@H]3O[C@H](CO)[C@@H](O)[C@H]3O)c2n1)C#N | G | 100G | φ | 120 |
7-cyano-7-deazaguanosine-5'-monophosphate | ppreQ0 | φ | 2000100551G | nucleotide | N#Cc1c[n]([C@@H]2O[C@H](COP(=O)([O-])[O-])[C@@H](O)[C@H]2O)c2nc(N)[nH]c(=O)c12 | G | 100551G | 409 | |
7-methylguanosine | m7G | 7 | 2000000007G | nucleoside | [C@@H]1([n]2c[n+](C)c3c2nc(nc3=O)N)O[C@H](CO)[C@@H](O)[C@H]1O | G | 7G | 7 | 116 |
7N-methyl-8-hydroguanosine-5'-monophosphate | pm7G | 7 | 2000007551G | nucleotide | C[n+]1c2c(nc(nc2=O)N)[n]([C@H]2[C@H](O)[C@H](O)[C@@H](COP(=O)([O-])[O-])O2)c1 | G | 7551G | 7 | 203 |
8-methyladenosine | m8A | â | 2000000008A | nucleoside | Cc1nc2c(N)ncnc2[n]1[C@@H]1O[C@H](CO)[C@@H](O)[C@H]1O | A | 8A | â | 131 |
8-methyladenosine-5'-monophosphate | pm8A | â | 2000008551A | nucleotide | Cc1nc2c(N)ncnc2[n]1[C@@H]1O[C@H](COP(=O)([O-])[O-])[C@@H](O)[C@H]1O | A | 8551A | 410 | |
[(2R,3S,5S)-3-hydroxy-5-(5-methyl-2,4-dioxopyrimidin-1-yl)oxolan-2-yl]methoxy-N-propylphosphonamidicacid | MU3 | 亱 | 40000035551U | nucleotide | CCCNP(=O)(O)OC[C@H]2O[C@H](n1cc(C)c(=O)[nH]c1=O)C[C@@H]2O | U | 40000035551U | 亱 | 456 |
[(2~{R},3~{R},4~{R},5~{R})-5-(4-acetamido-2-oxidanylidene-pyrimidin-1-yl)-4-methoxy-3-oxidanyl-oxolan-2-yl]methyl dihydrogen phosphate | pac4Cm | ℵ | 2009042551C | nucleotide | CO[C@H]1[C@H]([n]2c(=O)nc(NC(=O)C)cc2)O[C@H](COP(=O)([O-])[O-])[C@H]1O | C | 042551C | ℵ | 257 |
[(2~{R},3~{S},4~{R},5~{R})-5-[4-(dimethylamino)-2-oxidanylidene-pyrimidin-1-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methyl dihydrogen phosphate | pm4,4C | μ | 2000044551C | nucleotide | CN(c1nc(=O)[n]([C@H]2[C@H](O)[C@H](O)[C@@H](COP(=O)([O-])[O-])O2)cc1)C | C | 44551C | 250 | |
adenosine | A | A | A | nucleoside | Nc1ncnc2c1nc[n]2[C@@H]1O[C@H](CO)[C@@H](O)[C@H]1O | A | A | A | 109 |
adenosine pentaphosphate 5' cap (cap Ap5N) | ApppppN | Ϭ | 2000004555N | nucleotide | A | 4555N | 335 | ||
adenosine tetraphosphate 5' cap (cap Ap4N) | AppppN | IJ | 2000004554N | nucleotide | A | 4554N | 334 | ||
adenosine triphosphate 5' cap (cap A) | ApppN | Ϩ | 2000004553N | nucleotide | A | 4553N | 333 | ||
adenosine-3',5'-diphosphate | pAp | Ợ | 2000033551A | nucleotide | [O-]P(O[C@H]1[C@@H](O)[C@@H](O[C@@H]1COP(=O)([O-])[O-])[n]1c[n]c2c1[n]c[n]c2N)(=O)[O-] | A | 33551A | 310 | |
adenosine-5'-diphosphate | ppA | 2000000552A | nucleotide | [O-][P@@](OC[C@H]1O[C@H]([C@H](O)[C@@H]1O)[n]1c[n]c2c1[n]c[n]c2N)(OP([O-])(=O)[O-])=O | A | 552A | か | 317 | |
adenosine-5'-monophosphate | pA | A | A | nucleotide | Nc1c2c([n]([C@H]3[C@H](O)[C@H](O)[C@@H](COP(=O)([O-])[O-])O3)cn2)ncn1 | A | 551A | A | 444 |
adenosine-5'-phosphate-2',3'-cyclic phosphate | pA2'3'cp | Ҕ | 2000003377A | nucleotide | [O-][P@@]1(O[C@H]2[C@@H](O[C@H](COP(=O)([O-])[O-])[C@H]2O1)[n]1c[n]c2c1[n]c[n]c2N)=O | A | 3377A | 215 | |
adenosine-5'-triphosphate | pppA | ƿ | 2000000553A | nucleotide | [O-][P@](OP(=O)([O-])[O-])(O[P@]([O-])(OC[C@H]1O[C@H]([C@H](O)[C@@H]1O)[n]1c[n]c2c1[n]c[n]c2N)=O)=O | A | 553A | 233 | |
agmatidine | C+ | ¿ | 2000000020C | nucleoside | NC(NCCCCNc1nc(=N)cc[n]1[C@@H]1O[C@H](CO)[C@@H](O)[C@H]1O)=N | C | 20C | ¿ | 141 |
agmatidine-5'-monophosphate | pC+ | ¿ | 2000020551C | nucleotide | N=C(N)NCCCCNc1nc(=N)cc[n]1[C@@H]1O[C@H](COP(=O)([O-])[O-])[C@@H](O)[C@H]1O | C | 20551C | 411 | |
alpha-dimethylmonophosphate 5' cap | mmpN | Ѽ | 2000002551N | nucleotide | COP(OC)(OC[C@H]1O[C@@H]%91[C@H](O)[C@@H]1O)=O.[*]%91 | A | 2551N | 170 | |
alpha-methylmonophosphate 5' cap | mpN | Ѿ | 2000001551N | nucleotide | COP([O-])(OC[C@H]1O[C@@H]%91[C@H](O)[C@@H]1O)=O.[*]%91 | A | 1551N | 171 | |
any ribonucleoside residue | N | . | 2000000000N | nucleoside | A | N | . | 140 | |
archaeosine | G+ | ( | 2000000103G | nucleoside | Nc1[nH]c(=O)c2c(c[n]([C@@H]3O[C@H](CO)[C@@H](O)[C@H]3O)c2n1)C(N)=N | G | 103G | ( | 99 |
archaeosine-5'-monophosphate | pG+ | ( | 2000103551G | nucleotide | N=C(N)c1c[n]([C@@H]2O[C@H](COP(=O)([O-])[O-])[C@@H](O)[C@H]2O)c2nc(N)[nH]c(=O)c12 | G | 103551G | ( | 412 |
cyclic N6-threonylcarbamoyladenosine | ct6A | e | 2000000069A | nucleoside | CC(O)C1NC(=Nc2ncnc3c2nc[n]3[C@@H]2O[C@H](CO)[C@@H](O)[C@H]2O)OC1=O | A | 69A | e | 175 |
cyclic N6-threonylcarbamoyladenosine-5'-monophosphate | pct6A | e | 2000069551A | nucleotide | CC(O)C1NC(=Nc2ncnc3c2nc[n]3[C@@H]2O[C@H](COP(=O)([O-])[O-])[C@@H](O)[C@H]2O)OC1=O | A | 69551A | 413 | |
cytidine | C | C | C | nucleoside | Nc1nc(=O)[n]([C@H]2[C@H](O)[C@H](O)[C@@H](CO)O2)cc1 | C | C | C | 46 |
cytidine-5'-monophosphate | pC | C | C | nucleotide | Nc1nc(=O)[n]([C@H]2[C@H](O)[C@H](O)[C@@H](COP(=O)([O-])[O-])O2)cc1 | C | 551C | C | 300 |
cytidine-5'-phosphate-2',3'-cyclic phosphate | pC2'3'cp | Ҏ | 2000003377C | nucleotide | Nc1cc[n]([C@H]2[C@@H]3O[P@]([O-])(=O)O[C@@H]3[C@@H](COP([O-])([O-])=O)O2)c(=O)n1 | C | 3377C | 209 | |
dihydrouridine | D | D | 2000000008U | nucleoside | OC[C@H]1O[C@@H](N2CCC(=O)NC2=O)[C@H](O)[C@@H]1O | U | 8U | D | 14 |
epoxyqueuosine | oQ | ς | 2000000102G | nucleoside | Nc1[nH]c(=O)c2c([n]([C@H]3[C@H](O)[C@H](O)[C@@H](CO)O3)cc2CN[C@@H]2[C@@H](O)[C@@H](O)C3C2O3)n1 | G | 102G | ς | 6 |
epoxyqueuosine-5'-monophosphate | poQ | ς | 2000102551G | nucleotide | Nc1nc2c(c(CN[C@H]3C4OC4[C@H](O)[C@@H]3O)c[n]2[C@@H]2O[C@H](COP(=O)([O-])[O-])[C@@H](O)[C@H]2O)c(=O)[nH]1 | G | 102551G | 414 | |
galactosyl-queuosine | galQ | 9 | 2000000104G | nucleoside | Nc1[nH]c(=O)c2c([n]([C@H]3[C@H](O)[C@H](O)[C@@H](CO)O3)cc2CN[C@@H]2[C@@H](O[C@H]3C(O)[C@H](O)[C@@H](O)C(CO)O3)[C@@H](O)C=C2)n1 | G | 104G | 9 | 86 |
galactosyl-queuosine-5'-monophosphate | pgalQ | 9 | 2000104551G | nucleotide | Nc1nc2c(c(CN[C@H]3C=C[C@H](O)[C@@H]3O[C@@H]3OC(CO)[C@H](O)[C@@H](O)C3O)c[n]2[C@@H]2O[C@H](COP(=O)([O-])[O-])[C@@H](O)[C@H]2O)c(=O)[nH]1 | G | 104551G | 9 | 415 |
gamma-methyltriphosphate 5' cap | mpppN | § | 2000001553N | nucleotide | COP([O-])(OP([O-])(OP([O-])(OC[C@H]1O[C@@H]%91[C@H](O)[C@@H]1O)=O)=O)=O.[*]%91 | A | 1553N | § | 135 |
glutamyl-queuosine | gluQ | ⊄ | 2000000105G | nucleoside | NC(C(O[C@@H]1[C@@H](NCc2c3c(nc(nc3=O)N)[n]([C@H]3[C@H](O)[C@H](O)[C@@H](CO)O3)c2)C=C[C@@H]1O)=O)CCC(=O)O | G | 105G | ⊄ | 42 |
glutamyl-queuosine-5'-monophosphate | pgluQ | ⊄ | 2000105551G | nucleotide | Nc1nc2c(c(CN[C@H]3C=C[C@H](O)[C@@H]3OC(=O)C(N)CCC(=O)O)c[n]2[C@@H]2O[C@H](COP(=O)([O-])[O-])[C@@H](O)[C@H]2O)c(=O)[nH]1 | G | 105551G | ⊄ | 416 |
guanoside-5'-phosphate-2',3'-cyclic phosphate | pG2'3'cp | Ґ | 2000003377G | nucleotide | [C@H]1([n]2cnc3c2nc(nc3=O)N)[C@@H]2O[P@]([O-])(=O)O[C@@H]2[C@@H](COP([O-])([O-])=O)O1 | G | 3377G | 238 | |
guanosine | G | G | G | nucleoside | Nc1[nH]c(=O)c2nc[n]([C@@H]3O[C@H](CO)[C@@H](O)[C@H]3O)c2n1 | G | G | G | 38 |
guanosine added to any ribonucleotide | pG(pN) | Ʉ | 2000000551G2000000511N | nucleotide | Nc1[nH]c2c(nc[n]2[C@H]2[C@H](O)[C@H](OP(OC[C@@H]3[C@@H](O)[C@@H](O)[C@H]%91O3)(=O)[O-])[C@@H](COP(=O)([O-])[O-])O2)c(=O)n1.[*]%91 | A | 551G551N | 161 | |
guanosine triphosphate 5' cap (cap G) | GpppN | ϑ | 2000009553N | nucleotide | Nc1nc(=O)c2c([n](cn2)[C@@H]2O[C@H](COP([O-])(OP([O-])(OP([O-])(OC[C@H]3O[C@@H]%91[C@H](O)[C@@H]3O)=O)=O)=O)[C@@H](O)[C@H]2O)[nH]1.[*]%91 | A | 9553N | ϑ | 148 |
guanosine-3',5'-diphosphate | pGp | Ⱥ | 2000033551G | nucleotide | [C@H]1([n]2cnc3c2nc(nc3=O)N)[C@H](O)[C@H](OP([O-])([O-])=O)[C@@H](COP([O-])([O-])=O)O1 | G | 33551G | Ⱥ | 259 |
guanosine-5'-diphosphate | ppG | Ƈ | 2000000552G | nucleotide | [O-][P@@](OC[C@H]1O[C@H]([C@H](O)[C@@H]1O)[n]1c[n]c2C(=O)NC(N)=Nc21)(OP([O-])(=O)[O-])=O | G | 552G | Ƈ | 218 |
guanosine-5'-monophosphate | pG | G | G | nucleotide | Nc1nc2c(nc[n]2[C@@H]2O[C@H](COP(=O)([O-])[O-])[C@@H](O)[C@H]2O)c(=O)[nH]1 | G | 551G | G | 235 |
guanosine-5'-triphosphate | pppG | Ȝ | 2000000553G | nucleotide | [C@H]1([n]2cnc3c2nc(nc3=O)N)[C@H](O)[C@H](O)[C@@H](CO[P@](O[P@@]([O-])(=O)OP([O-])([O-])=O)(=O)[O-])O1 | G | 553G | 202 | |
hydroxy-N6-threonylcarbamoyladenosine | ht6A | « | 2000002165A | nucleoside | OC(C(NC(Nc1ncnc2c1nc[n]2[C@@H]1O[C@H](CO)[C@@H](O)[C@H]1O)=O)C(O)CO)=O | A | 2165A | « | 181 |
hydroxy-N6-threonylcarbamoyladenosine-5'-monophosphate | pht6A | « | 2002165551A | nucleotide | O=C(Nc1ncnc2c1nc[n]2[C@@H]1O[C@H](COP(=O)([O-])[O-])[C@@H](O)[C@H]1O)NC(C(=O)O)C(O)CO | A | 2165551A | 417 | |
hydroxywybutosine | OHyW | ⊆ | 2000034830G | nucleoside | C[n]1c2c(nc[n]2[C@@H]2O[C@H](CO)[C@@H](O)[C@H]2O)c(=O)[n]2c1nc(C)c2CC(O)C(NC(OC)=O)C(OC)=O | G | 34830G | ⊆ | 97 |
hydroxywybutosine-5'-monophosphate | pOHyW | ⊆ | 2034830551G | nucleotide | COC(=O)NC(C(=O)OC)C(O)Cc1c(C)nc2[n](C)c3c(c(=O)[n]12)nc[n]3[C@@H]1O[C@H](COP(=O)([O-])[O-])[C@@H](O)[C@H]1O | G | 34830551G | 418 | |
inosine | I | I | 2000000009A | nucleoside | OC[C@@H]1[C@@H](O)[C@@H](O)[C@H]([n]2c3nc[nH]c(=O)c3nc2)O1 | A | 9A | I | 113 |
inosine-5'-monophosphate | pI | I | 2000009551A | nucleotide | O[C@H]1[C@@H](O)[C@H]([n]2c3ncnc(=O)c3nc2)O[C@@H]1COP(=O)([O-])[O-] | A | 9551A | I | 217 |
isowyosine | imG2 | ⊇ | 2000000042G | nucleoside | Cc1nc2[nH]c3c(c(=O)[n]2c1C)nc[n]3[C@@H]1O[C@H](CO)[C@@H](O)[C@H]1O | G | 42G | ⊇ | 89 |
isowyosine-5'-monophosphate | pimG2 | ⊇ | 2000042551G | nucleotide | Cc1nc2[nH]c3c(c(=O)[n]2c1C)nc[n]3[C@@H]1O[C@H](COP(=O)([O-])[O-])[C@@H](O)[C@H]1O | G | 42551G | 419 | |
mannosyl-queuosine | manQ | 8 | 2000000106G | nucleoside | Nc1nc(=O)c2c([n]([C@H]3[C@H](O)[C@H](O)[C@@H](CO)O3)cc2CN[C@@H]2[C@@H](O[C@H]3C(O)[C@H](O)[C@H](O)C(CO)O3)[C@@H](O)C=C2)n1 | G | 106G | 8 | 90 |
mannosyl-queuosine-5'-monophosphate | pmanQ | 8 | 2000106551G | nucleotide | Nc1nc2c(c(CN[C@H]3C=C[C@H](O)[C@@H]3O[C@@H]3OC(CO)[C@@H](O)[C@@H](O)C3O)c[n]2[C@@H]2O[C@H](COP(=O)([O-])[O-])[C@@H](O)[C@H]2O)c(=O)[nH]1 | G | 106551G | 8 | 420 |
methylated undermodified hydroxywybutosine | OHyWy | y | 2000003480G | nucleoside | C[n]1c2nc(C)c(CC(O)C(N)C(OC)=O)[n]2c(=O)c2nc[n]([C@@H]3O[C@H](CO)[C@@H](O)[C@H]3O)c12 | G | 3480G | y | 160 |
methylated undermodified hydroxywybutosine-5'-monophosphate | pOHyWy | y | 2003480551G | nucleotide | COC(=O)C(N)C(O)Cc1c(C)nc2[n](C)c3c(c(=O)[n]12)nc[n]3[C@@H]1O[C@H](COP(=O)([O-])[O-])[C@@H](O)[C@H]1O | G | 3480551G | 421 | |
methylwyosine | mimG | ∑ | 2000000342G | nucleoside | Cc1c(C)[n]2c([n](c3c(c2=O)nc[n]3[C@H]2[C@H](O)[C@H](O)[C@@H](CO)O2)C)n1 | G | 342G | ∑ | 59 |
methylwyosine-5'-monophosphate | pmimG | ∑ | 2000342551G | nucleotide | Cc1nc2[n](C)c3c(c(=O)[n]2c1C)nc[n]3[C@@H]1O[C@H](COP(=O)([O-])[O-])[C@@H](O)[C@H]1O | G | 342551G | 365 | |
N(1)-methyladenosine 5'-monophosphate | pm1A | Ѣ | 2000001551A | nucleotide | C[n]1c(=N)c2c([n]([C@H]3[C@H](O)[C@H](O)[C@@H](COP(=O)([O-])[O-])O3)cn2)nc1 | A | 1551A | " | 204 |
N(4)-acetylcytidine-5'-monophosphate | pac4C | M | 2000042551C | nucleotide | CC(Nc1nc(=O)[n]([C@H]2[C@H](O)[C@H](O)[C@@H](COP(=O)([O-])[O-])O2)cc1)=O | C | 42551C | M | 200 |
N2,2'-O-dimethylguanosine | m2Gm | γ | 2000000902G | nucleoside | CO[C@H]1[C@H]([n]2cnc3c2nc([nH]c3=O)NC)O[C@H](CO)[C@H]1O | G | 02G | γ | 102 |
N2,2'-O-dimethylguanosine-5'-monophospate | pm2Gm | γ | 2000902551G | nucleotide | CNc1nc2c(nc[n]2[C@@H]2O[C@H](COP(=O)([O-])[O-])[C@@H](O)[C@H]2OC)c(=O)[nH]1 | G | 02551G | 428 | |
N2,7,2'-O-trimethylguanosine | m2,7Gm | æ | 2000009027G | nucleoside | [C@H]1([n]2c[n+](C)c3c2nc(nc3=O)NC)[C@H](OC)[C@H](O)[C@@H](CO)O1 | G | 027G | æ | 142 |
N2,7,2'-O-trimethylguanosine-5'-monophosphate | pm2,7Gm | ∨ | 2009027551G | nucleotide | CNc1nc(=O)c2c([n]([C@H]3[C@H](OC)[C@H](O)[C@@H](COP(=O)([O-])[O-])O3)c[n+]2C)n1 | G | 027551G | 442 | |
N2,7-dimethylguanosine | m2,7G | ∨ | 2000000027G | nucleoside | CNc1nc(=O)c2c([n]([C@H]3[C@H](O)[C@H](O)[C@@H](CO)O3)c[n+]2C)n1 | G | 27G | ∨ | 4 |
N2,7-dimethylguanosine cap (cap DMG) | m2,7GpppN | ® | 2000279553N | nucleotide | CNc1nc(=O)c2c([n](c[n+]2C)[C@@H]2O[C@H](COP([O-])(OP([O-])(OP([O-])(OC[C@H]3O[C@@H]%91[C@H](O)[C@@H]3O)=O)=O)=O)[C@@H](O)[C@H]2O)[nH]1.[*]%91 | A | 279553N | ® | 133 |
N2,7-dimethylguanosine-5'-monophosphate | pm2,7G | æ | 2000004553N | nucleotide | CNc1nc(=O)c2c([n]([C@H]3[C@H](O)[C@H](O)[C@@H](COP(=O)([O-])[O-])O3)c[n+]2C)n1 | G | 27551G | 440 | |
N2,N2,2'-O-trimethylguanosine | m2,2Gm | | | 2000009022G | nucleoside | CN(C)c1[nH]c(=O)c2nc[n]([C@@H]3O[C@H](CO)[C@@H](O)[C@H]3OC)c2n1 | G | 022G | | | 40 |
N2,N2,2'-O-trimethylguanosine-5'-monophospate | pm2,2Gm | | | 2009022551G | nucleotide | CO[C@@H]1[C@H](O)[C@@H](COP(=O)([O-])[O-])O[C@H]1[n]1cnc2c(=O)[nH]c(N(C)C)nc12 | G | 022551G | | | 429 |
N2,N2,7-trimethylguanosine | m2,2,7G | ∠ | 2000000227G | nucleoside | CN(c1nc(=O)c2c([n]([C@H]3[C@H](O)[C@H](O)[C@@H](CO)O3)c[n+]2C)n1)C | G | 227G | ∠ | 111 |
N2,N2,7-trimethylguanosine cap (cap TMG) | m2,2,7GpppN | ¶ | 2002279553N | nucleotide | CN(C)c1nc(=O)c2c([n](c[n+]2C)[C@@H]2O[C@H](COP([O-])(OP([O-])(OP([O-])(OC[C@H]3O[C@@H]%91[C@H](O)[C@@H]3O)=O)=O)=O)[C@@H](O)[C@H]2O)[nH]1.[*]%91 | A | 2279553N | ¶ | 134 |
N2,N2,7-trimethylguanosine-5'-monophosphate | pm2,2,7G | ∠ | 2000227551G | nucleotide | CN(c1nc(=O)c2c([n]([C@H]3[C@H](O)[C@H](O)[C@@H](COP(=O)([O-])[O-])O3)c[n+]2C)n1)C | G | 227551G | 441 | |
N2,N2-dimethylguanosine | m2,2G | R | 2000000022G | nucleoside | CN(C)c1[nH]c(=O)c2nc[n]([C@@H]3O[C@H](CO)[C@@H](O)[C@H]3O)c2n1 | G | 22G | R | 13 |
N2-dimethylguanosine-5'-monophosphate | pm2,2G | R | 2000022551G | nucleotide | CN(C)c1nc2c(nc[n]2[C@@H]2O[C@H](COP(=O)([O-])[O-])[C@@H](O)[C@H]2O)c(=O)[nH]1 | G | 22551G | R | 198 |
N2-methylguanosine | m2G | L | 2000000002G | nucleoside | CNc1[nH]c(=O)c2nc[n]([C@@H]3O[C@H](CO)[C@@H](O)[C@H]3O)c2n1 | G | 2G | L | 36 |
N4,2'-O-dimethylcytidine | m4Cm | λ | 2000000904C | nucleoside | CO[C@H]1[C@H]([n]2ccc(NC)nc2=O)O[C@H](CO)[C@H]1O | C | 04C | Λ | 39 |
N4,N4,2'-O-trimethylcytidine | m4,4Cm | β | 2000009044C | nucleoside | CO[C@H]1[C@H]([n]2c(=O)nc(N(C)C)cc2)O[C@H](CO)[C@H]1O | C | 044C | β | 69 |
N4,N4,2'-O-trimethylcytidine-5'-monophospate | pm4,4Cm | β | 2009044551C | nucleotide | CO[C@@H]1[C@H](O)[C@@H](COP(=O)([O-])[O-])O[C@H]1[n]1ccc(N(C)C)nc1=O | C | 044551C | 427 | |
N4,N4-dimethylcytidine | m4,4C | μ | 2000000044C | nucleoside | CN(c1nc(=O)[n]([C@H]2[C@H](O)[C@H](O)[C@@H](CO)O2)cc1)C | C | 44C | μ | 15 |
N4-acetyl-2'-O-methylcytidine | ac4Cm | ℵ | 2000009042C | nucleoside | CO[C@H]1[C@H]([n]2c(=O)nc(NC(=O)C)cc2)O[C@H](CO)[C@H]1O | C | 042C | ℵ | 106 |
N4-acetylcytidine | ac4C | M | 2000000042C | nucleoside | CC(Nc1nc(=O)[n]([C@H]2[C@H](O)[C@H](O)[C@@H](CO)O2)cc1)=O | C | 42C | M | 81 |
N4-methylcytidine | m4C | ν | 2000000004C | nucleoside | CNc1nc(=O)[n]([C@H]2[C@H](O)[C@H](O)[C@@H](CO)O2)cc1 | C | 4C | ν | 9 |
N6,2'-O-dimethyladenosine | m6Am | χ | 2000000906A | nucleoside | CO[C@H]1[C@H]([n]2cnc3c2ncnc3NC)O[C@H](CO)[C@H]1O | A | 06A | χ | 82 |
N6,2'-O-dimethyladenosine-5'-monophospate | pm6Am | χ | 2000906551A | nucleotide | CNc1ncnc2c1nc[n]2[C@@H]1O[C@H](COP(=O)([O-])[O-])[C@@H](O)[C@H]1OC | A | 06551A | χ | 430 |
N6,N6,2'-O-trimethyladenosine | m6,6Am | η | 2000009066A | nucleoside | CN(C)c1ncnc2c1nc[n]2[C@@H]1O[C@H](CO)[C@@H](O)[C@H]1OC | A | 066A | η | 124 |
N6,N6,2'-O-trimethyladenosine-5'-monophospate | pm6,6Am | η | 2009066551A | nucleotide | CO[C@@H]1[C@H](O)[C@@H](COP(=O)([O-])[O-])O[C@H]1[n]1cnc2c(N(C)C)ncnc12 | A | 066551A | 431 | |
N6,N6-dimethyladenosine | m6,6A | ζ | 2000000066A | nucleoside | CN(C)c1ncnc2c1nc[n]2[C@@H]1O[C@H](CO)[C@@H](O)[C@H]1O | A | 66A | ζ | 41 |
N6-(cis-hydroxyisopentenyl)adenosine | io6A | Ỽ | 2000000060A | nucleoside | CC(CO)=CCNc1ncnc2c1nc[n]2[C@@H]1O[C@H](CO)[C@@H](O)[C@H]1O | A | 60A | ` | 10 |
N6-(cis-hydroxyisopentenyl)adenosine-5'-monophospate | pio6A | Ỽ | 2000060551A | nucleotide | CC(=CCNc1ncnc2c1nc[n]2[C@@H]1O[C@H](COP(=O)([O-])[O-])[C@@H](O)[C@H]1O)CO | A | 60551A | ` | 432 |
N6-acetyladenosine | ac6A | ⇓ | 2000000064A | nucleoside | CC(Nc1ncnc2c1nc[n]2[C@@H]1O[C@H](CO)[C@@H](O)[C@H]1O)=O | A | 64A | ⇓ | 125 |
N6-acetyladenosine-5'-monophospate | pac6A | ⇓ | 2000064551A | nucleotide | CC(=O)Nc1ncnc2c1nc[n]2[C@@H]1O[C@H](COP(=O)([O-])[O-])[C@@H](O)[C@H]1O | A | 64551A | 433 | |
N6-formyladenosine | f6A | Ϩ | 2000000067A | nucleoside | OC[C@H]1O[C@@H]([n]2cnc3c(NC=O)ncnc23)[C@H](O)[C@@H]1O | A | 67A | Ϩ | 177 |
N6-formyladenosine-5'-monophospate | pf6A | Ϩ | 2000067551A | nucleotide | O=CNc1ncnc2c1nc[n]2[C@@H]1O[C@H](COP(=O)([O-])[O-])[C@@H](O)[C@H]1O | A | 67551A | 434 | |
N6-glycinylcarbamoyladenosine | g6A | ≡ | 2000000065A | nucleoside | OC(CNC(Nc1ncnc2c1nc[n]2[C@@H]1O[C@H](CO)[C@@H](O)[C@H]1O)=O)=O | A | 65A | ≡ | 114 |
N6-glycinylcarbamoyladenosine-5'-monophosphate | pg6A | ≡ | 2000065551A | nucleotide | O=C(O)CNC(=O)Nc1ncnc2c1nc[n]2[C@@H]1O[C@H](COP(=O)([O-])[O-])[C@@H](O)[C@H]1O | A | 65551A | 435 | |
N6-hydroxymethyladenosine | hm6A | Ϫ | 2000000068A | nucleoside | O[C@H]1[C@H]([n]2cnc3c(NCO)ncnc23)O[C@H](CO)[C@H]1O | A | 68A | Ϫ | 176 |
N6-hydroxymethyladenosine-5'-monophosphate | phm6A | Ϫ | 2000068551A | nucleotide | O=P([O-])([O-])OC[C@H]1O[C@@H]([n]2cnc3c(NCO)ncnc23)[C@H](O)[C@@H]1O | A | 68551A | 436 | |
N6-hydroxynorvalylcarbamoyladenosine | hn6A | √ | 2000000063A | nucleoside | CCC(O)C(NC(Nc1ncnc2c1nc[n]2[C@@H]1O[C@H](CO)[C@@H](O)[C@H]1O)=O)C(O)=O | A | 63A | √ | 19 |
N6-hydroxynorvalylcarbamoyladenosine-5'-monophosphate | phn6A | √ | 2000063551A | nucleotide | CCC(O)C(NC(=O)Nc1ncnc2c1nc[n]2[C@@H]1O[C@H](COP(=O)([O-])[O-])[C@@H](O)[C@H]1O)C(=O)O | A | 63551A | 437 | |
N6-isopentenyl-adenosine-5'-monophosphate | pi6A | Ч | 2000061551A | nucleotide | CC(=CCNc1c2c([n]([C@H]3[C@H](O)[C@H](O)[C@@H](COP(=O)([O-])[O-])O3)cn2)ncn1)C | A | 61551A | + | 253 |
N6-isopentenyladenosine | i6A | Ч | 2000000061A | nucleoside | CC(C)=CCNc1ncnc2c1nc[n]2[C@@H]1O[C@H](CO)[C@@H](O)[C@H]1O | A | 61A | + | 56 |
N6-methyl-adenosine pentaphosphate 5' cap (cap Ap5N) | m6ApppppN | Ϛ | 2000064555N | nucleotide | A | 64555N | 338 | ||
N6-methyl-adenosine tetraphosphate 5' cap (cap Ap4N) | m6AppppN | Ϙ | 2000064554N | nucleotide | A | 64554N | 337 | ||
N6-methyl-adenosine triphosphate 5' cap (cap A) | m6ApppN | Ϯ | 2000064553N | nucleotide | A | 64553N | 336 | ||
N6-methyl-N6-threonylcarbamoyladenosine | m6t6A | E | 2000000662A | nucleoside | C[C@H]([C@@H](C(=O)O)NC(Nc1c2c([n]([C@H]3[C@H](O)[C@H](O)[C@@H](CO)O3)cn2)ncn1)=O)O | A | 662A | E | 16 |
N6-methyl-N6-threonylcarbamoyladenosine-5'-monophosphate | pm6t6A | E | 2000662551A | nucleotide | [O-]P(OC[C@H]1O[C@H]([C@H](O)[C@@H]1O)[n]1c[n]c2c1[n]c[n]c2N(C)C(=O)N[C@H](C(O)=O)[C@H](O)C)(=O)[O-] | A | 662551A | E | 302 |
N6-methyladenosine | m6A | Ж | 2000000006A | nucleoside | CNc1ncnc2c1nc[n]2[C@@H]1O[C@H](CO)[C@@H](O)[C@H]1O | A | 6A | = | 96 |
N6-methyladenosine-5'-monophosphate | pm6A | Ж | 2000006551A | nucleotide | [O-]P(OC[C@H]1O[C@H]([C@H](O)[C@@H]1O)[n]1c[n]c2c1[n]c[n]c2NC)(=O)[O-] | A | 6551A | = | 211 |
N6-threonylcarbamoyladenosine | t6A | 6 | 2000000062A | nucleoside | CC(O)C(N)C(NC(Nc1ncnc2c1nc[n]2[C@@H]1O[C@H](CO)[C@@H](O)[C@H]1O)=O)=O | A | 62A | 6 | 130 |
N6-threonylcarbamoyladenosine-5'-monophosphate | pt6A | 6 | 2000062551A | nucleotide | [O-]P(OC[C@H]1O[C@H]([C@H](O)[C@@H]1O)[n]1c[n]c2c1[n]c[n]c2NC(=O)N[C@H](C(O)=O)[C@H](O)C)(=O)[O-] | A | 62551A | 6 | 231 |
N7-methyl-guanosine tetraphosphate 5' cap (cap m7Gp4N) | m7GppppN | Ϟ | 2000079554N | nucleotide | A | 79554N | 339 | ||
N7-methyl-guanosine cap (cap 0) | m7GpppN | © | 2000079553N | nucleotide | C[n+]1c[n]([C@@H]2O[C@H](COP([O-])(OP([O-])(OP([O-])(OC[C@H]3O[C@@H]%91[C@H](O)[C@@H]3O)=O)=O)=O)[C@@H](O)[C@H]2O)c2c1c(nc(N)[nH]2)=O.[*]%91 | A | 79553N | © | 132 |
O2'-methylcytidine-5'-monophosphate | pCm | B | 2000090551C | nucleotide | CO[C@H]1[C@H]([n]2c(=O)nc(N)cc2)O[C@H](COP(=O)([O-])[O-])[C@H]1O | C | 0551C | B | 201 |
O2'-methylguanosine-5'-monophosphate | pGm | # | 2000090551G | nucleotide | CO[C@@H]1[C@H](O)[C@@H](COP(=O)([O-])[O-])O[C@H]1[n]1cnc2c(=O)[nH]c(N)nc12 | G | 0551G | # | 193 |
O2'-methyluridine 5'-monophosphate | pUm | J | 2000090551U | nucleotide | CO[C@@H]1[C@H](O)[C@@H](COP(=O)([O-])[O-])O[C@H]1[n]1ccc(=O)[nH]c1=O | U | 0551U | J | 205 |
peroxywybutosine | o2yW | W | 2000034832G | nucleoside | C[n]1c2c(nc[n]2[C@@H]2O[C@H](CO)[C@@H](O)[C@H]2O)c(=O)[n]2c1nc(C)c2CC(OO)C(NC(OC)=O)C(OC)=O | G | 34832G | W | 121 |
peroxywybutosine-5'-monophosphate | po2yW | W | 2034832551G | nucleotide | COC(=O)NC(C(=O)OC)C(Cc1c(C)nc2[n](C)c3c(c(=O)[n]12)nc[n]3[C@@H]1O[C@H](COP(=O)([O-])[O-])[C@@H](O)[C@H]1O)OO | QtRNA | 34832551G | Ŵ | 422 |
pseudouridine | Y | P | 2000000009U | nucleoside | OC[C@H]1O[C@@H](c2c[nH]c(=O)[nH]c2=O)[C@H](O)[C@@H]1O | U | 9U | P | 118 |
pseudouridine-5'-monophosphate | pY | P | 2000009551U | nucleotide | O=c1[nH]cc([C@@H]2O[C@H](COP(=O)([O-])[O-])[C@@H](O)[C@H]2O)c(=O)[nH]1 | U | 9551U | P | 185 |
queuine | Qbase | ∴ | 2000010000G | base | NC1NC(=O)c2c(c[nH]c2N=1)CN[C@@H]1[C@@H](O)[C@@H](O)C=C1 | G | 10000G | ∴ | 105 |
queuosine | Q | Q | 2000000010G | nucleoside | Nc1[nH]c(=O)c2c([n]([C@H]3[C@H](O)[C@H](O)[C@@H](CO)O3)cc2CN[C@@H]2[C@@H](O)[C@@H](O)C=C2)n1 | G | 10G | Q | 65 |
queuosine-5'-monophospate | pQ | Q | 2000042551G | nucleotide | Nc1nc2c(c(CN[C@H]3C=C[C@H](O)[C@@H]3O)c[n]2[C@@H]2O[C@H](COP(=O)([O-])[O-])[C@@H](O)[C@H]2O)c(=O)[nH]1 | G | 10551G | Q | 423 |
undermodified hydroxywybutosine | OHyWx | š | 2000003470G | nucleoside | C[n]1c2c(nc[n]2[C@@H]2O[C@H](CO)[C@@H](O)[C@H]2O)c(=O)[n]2c1nc(C)c2CC(O)C(N)C(O)=O | G | 3470G | š | 93 |
undermodified hydroxywybutosine-5'-monophospate | pOHyWx | š | 2003470551G | nucleotide | Cc1nc2[n](C)c3c(c(=O)[n]2c1CC(O)C(N)C(=O)O)nc[n]3[C@@H]1O[C@H](COP(=O)([O-])[O-])[C@@H](O)[C@H]1O | G | 3470551G | 424 | |
unknown 5' monophosphate ribonucleotide | pN | m | 2000000551N | nucleotide | O[C@@H]1[C@H](O)[C@@H](COP([O-])([O-])=O)O[C@@H]%911.[*]%91 | A | 551N | m | 165 |
unknown modification | xX | Ѯ | 2000000000X | nucleoside | - | X | X | @ | 98 |
unknown modified adenosine | xA | H | 2000000999A | nucleoside | A | ?A | H | 72 | |
unknown modified cytidine | xC | Ѵ | 2000000999C | nucleoside | - | C | ?C | < | 70 |
unknown modified guanosine | xG | ʆ | 2000000999G | nucleoside | - | G | ?G | ; | 66 |
unknown modified uridine | xU | N | 2000000999U | nucleoside | - | U | ?U | N | 76 |
unknown nucleoside 2'-O-methylated | Xm | Ѩ | 2000000090X | nucleoside | - | X | 0X | Î | 25 |
uridine | U | U | U | nucleoside | OC[C@H]1O[C@@H]([n]2ccc(=O)[nH]c2=O)[C@H](O)[C@@H]1O | U | U | U | 60 |
uridine 5-oxyacetic acid | cmo5U | V | 2000000502U | nucleoside | OC[C@@H]1[C@@H](O)[C@@H](O)[C@H]([n]2c(=O)[nH]c(=O)c(OCC(=O)O)c2)O1 | U | 502U | V | 47 |
uridine 5-oxyacetic acid methyl ester | mcmo5U | υ | 2000000503U | nucleoside | COC(COc1c[n](C2O[C@H](CO)[C@@H](O)[C@H]2O)c(=O)[nH]c1=O)=O | U | 503U | υ | 58 |
uridine 5-oxyacetic acid methyl ester-5'-monophospate | pmcmo5U | υ | 2000503551U | nucleotide | COC(=O)COc1c[n](C2O[C@H](COP(=O)([O-])[O-])[C@@H](O)[C@H]2O)c(=O)[nH]c1=O | U | 503551U | 425 | |
uridine-5'-monophosphate | pU | U | U | nucleotide | O=c1cc[n]([C@@H]2O[C@H](COP(=O)([O-])[O-])[C@@H](O)[C@H]2O)c(=O)[nH]1 | U | 551U | U | 255 |
uridine-5'-monophosphate-2',3'-cyclic phosphate | pU2'3'cp | Ҋ | 2003377551U | nucleotide | [O-]P1(O[C@H]2[C@@H](O[C@H](COP(=O)([O-])[O-])[C@H]2O1)N1C(NC(=O)C=C1)=O)=O | U | 3377551U | 268 | |
wybutosine | yW | Y | 2000003483G | nucleoside | COC(NC(C(OC)=O)CCc1[n]2c([n](c3c(c2=O)nc[n]3[C@H]2[C@H](O)[C@H](O)[C@@H](CO)O2)C)nc1C)=O | G | 3483G | Y | 30 |
wybutosine-5'-monophosphate | pyW | Y | 2003483551G | nucleotide | COC(N[C@@H](C(OC)=O)CCc1[n]2c([n](c3c(c2=O)nc[n]3[C@H]2[C@H](O)[C@H](O)[C@@H](COP(=O)([O-])[O-])O2)C)nc1C)=O | G | 3483551G | Y | 213 |
wybutosine[C15(S)]-5'-monophosphate | pyyW | ϓ | 2034831551G | nucleotide | COC(N[C@H](C(OC)=O)CCc1[n]2c([n](c3c(c2=O)nc[n]3[C@H]2[C@H](O)[C@H](O)[C@@H](COP(=O)([O-])[O-])O2)C)nc1C)=O | G | 34831551G | 244 | |
wyosine | imG | € | 2000000034G | nucleoside | C[n]1c2c(nc[n]2[C@@H]2O[C@H](CO)[C@@H](O)[C@H]2O)c(=O)[n]2cc(C)nc12 | G | 34G | € | 139 |
wyosine-5'-monophospate | pimG | € | 2000034551G | nucleotide | Cc1c[n]2c(=O)c3nc[n]([C@@H]4O[C@H](COP(=O)([O-])[O-])[C@@H](O)[C@H]4O)c3[n](C)c2n1 | G | 34551G | 426 |
ID | MODOMICS code | Name | Reference NucleoBase | Short Name | SMILES | RNAMods code | Moiety type |
---|
ID | MODOMICS code | Name | Reference NucleoBase | Short Name | SMILES | RNAMods code | Moiety type |
---|---|---|---|---|---|---|---|
188 | 2000000010U | 5-bromo-uridine-5'-monophosphate | Uridine | 5BU | [O-]P(OC[C@H]1O[C@H]([C@H](O)[C@@H]1O)N1C=C(Br)C(NC1=O)=O)(=O)[O-] | 㑐 | nucleotide |
189 | 3000000046C | [(1R,3R,4R,7S)-7-hydroxy-3-(5-methylcytosin-1-YL)-2,5-dioxabicyclo[2.2.1]hept-1-YL]methyl dihydrogen phosphate | Cytidine | LCC | [O-]P(OC[C@]12CO[C@H]([C@@H]1O)[C@@H](O2)N1C(N=C(N)C(=C1)C)=O)(=O)[O-] | 㐱 | nucleotide |
195 | 1000000005X | 2-amino-9-[2-deoxyribofuranosyl]-9H-purine-5'-monophosphate | Unknown | 2PR | [O-]P(OC[C@H]1O[C@H](C[C@@H]1O)[n]1c[n]c2c1[n]c(N)[n]c2)(=O)[O-] | 㐈 | nucleotide |
196 | 2000000055X | 1-(beta-D-ribofuranosyl)-pyridin-4-one-5'-phosphate | Unknown | ONE | [O-]P(OC[C@H]1O[C@H]([C@H](O)[C@@H]1O)N1C=CC(=O)C=C1)(=O)[O-] | 㑊 | nucleotide |
197 | 2000000058X | 1-(beta-D-ribofuranosyl)-pyrimidin-2-one-5'-phosphate | Unknown | PYO | [O-]P(OC[C@H]1O[C@H]([C@H](O)[C@@H]1O)N1C(N=CC=C1)=O)(=O)[O-] | 㑋 | nucleotide |
206 | 2000000031C | 5-bromocytidine 5'-(dihydrogen phosphate) | Cytidine | CBV | [O-]P(OC[C@H]1O[C@H]([C@H](O)[C@@H]1O)N1C=C(Br)C(N)=NC1=O)(=O)[O-] | 㐬 | nucleotide |
210 | 3000000047G | [(1R,3R,4R,7S)-7hydroxy-3-(guanin-9-YL)-2,5-dioxabicyclo[2.2.1]hept-1-YL]methyl dihydrogen phosphate | Guanosine | LCG | [O-]P(OC[C@]12CO[C@H]([C@@H]1O)[C@@H](O2)[n]1c[n]c2C(=O)NC(N)=Nc21)(=O)[O-] | 㐹 | nucleotide |
220 | 1000000030C | 5-bromo-2'-deoxy-cytidine-5'-monophosphate | Cytidine | CBR | [O-]P(OC[C@H]1O[C@@H](N2C(=O)N=C(N)C(Br)=C2)C[C@@H]1O)(=O)[O-] | 㐆 | nucleotide |
221 | 2000000056X | purine riboside-5'-monophosphate | Unknown | P5P | [O-]P(OC[C@H]1O[C@H]([C@H](O)[C@@H]1O)[n]1c[n]c2c1[n]c[n]c2)(=O)[O-] | 㐣 | nucleotide |
222 | 1000000026G | 8-bromo-2'-deoxyguanosine-5'-monophosphate | Guanosine | BGM | [O-]P(OC[C@H]1O[C@@H]([n]2c(Br)[n]c3C(NC(N)=Nc23)=O)C[C@@H]1O)(=O)[O-] | 㐉 | nucleotide |
224 | 5000000065U | uridine 5'-monothiophosphate | Uridine | U37 | O[C@@H]1[C@@H](COP(=O)([S-])[O-])O[C@@H](N2C(=O)NC(=O)C=C2)[C@@H]1O | 㑕 | nucleotide |
225 | 2000000008X | (1S)-1,4-anhydro-1-(3-methyl-2,4-dioxo-1,2,3,4-tetrahydropyrimidin-5-yl)-5-O-phosphono-D-ribitol | Unknown | 3TD | [O-]P(OC[C@H]1O[C@H]([C@H](O)[C@@H]1O)C1=CNC(=O)N(C1=O)C)(=O)[O-] | 㑂 | nucleotide |
226 | 2000000044U | 5-iodouridine-5'-monophosphate | Uridine | IU | [O-]P(OC[C@H]1O[C@H]([C@H](O)[C@@H]1O)N1C=C(I)C(NC1=O)=O)(=O)[O-] | 㑑 | nucleotide |
227 | 3000000064U | [(1R,3R,4R,7S)-7-hydroxy-3-(thymin-1-YL)-2,5-dioxabicyclo[2.2.1]hept-1-YL]methyl dihydrogen phosphate | Uridine | TLN | [O-]P(OC[C@]12CO[C@H]([C@@H]1O)[C@@H](O2)N1C(NC(=O)C(=C1)C)=O)(=O)[O-] | 㑒 | nucleotide |
228 | 3000000045A | [(1R,3R,4R,7S)-7-hydroxy-3-(adenin-9-YL)-2,5-dioxabicyclo[2.2.1]hept-1-YL]methyl dihydrogen phosphate | Adenosine | LCA | [O-]P(OC[C@]12CO[C@H]([C@@H]1O)[C@@H](O2)[n]1c[n]c2c1[n]c[n]c2N)(=O)[O-] | 㐜 | nucleotide |
229 | 2000000077X | 1-(5-O-phosphono-beta-D-ribofuranosyl)-4-selanylpyrimidin-2(1H)-one | Unknown | US5 | [O-]P(OC[C@H]1O[C@H]([C@H](O)[C@@H]1O)N1C(N=C([SeH])C=C1)=O)(=O)[O-] | 㑉 | nucleotide |
234 | 1000000027U | 5-bromo-2'-deoxyuridine-5'-monophosphate | Uridine | BRU | [O-]P(OC[C@H]1O[C@@H](N2C(=O)NC(=O)C(Br)=C2)C[C@@H]1O)(=O)[O-] | 㐍 | nucleotide |
236 | 2000000043A | isoguanosine-5'-monophosphate | Adenosine | IG | [O-]P(OC[C@H]1O[C@H]([C@H](O)[C@@H]1O)N1C=NC2C1=NC(=O)NC=2N)(=O)[O-] | 㐾 | nucleotide |
237 | 2000000042C | isocytidine-5'-monophosphate | Cytidine | IC | [O-]P(OC[C@H]1O[C@H]([C@H](O)[C@@H]1O)N1C(N)=NC(=O)C=C1)(=O)[O-] | 㐳 | nucleotide |
239 | 5000000006G | guanosine phosphorodithioate | Guanosine | 2SG | NC1NC(=O)c2nc[n]([C@H]3[C@H](O)[C@H](O)[C@@H](COP(=O)([S-])[S-])O3)c2N=1 | 㐻 | nucleotide |
242 | 3000000017C | 2'-amine-cytidine-5'-monophosphate | Cytidine | A5M | [O-]P(OC[C@H]1O[C@H]([C@H](N)[C@@H]1O)N1C(N=C(N)C=C1)=O)(=O)[O-] | 㐧 | nucleotide |
243 | 5000000062A | adenosine-5'-thio-monophosphate | Adenosine | SRA | Nc1ncnc2n(cnc12)[C@@H]1O[C@H](COP([O-])([O-])=S)[C@@H](O)[C@H]1O | 㐢 | nucleotide |
245 | 3000000084C | (D)-2'-methylselenyl-2'-deoxycytidine-5'-phosphate | Cytidine | CSL | Nc1cc[n]([C@@H]2O[C@H](COP([O-])([O-])=O)[C@@H](O)[C@H]2[Se]C)c(=O)n1 | 㐃 | nucleotide |
246 | 2000000053X | (1S)-1,4-anhydro-1-(2,4-difluoro-5-methylphenyl)-5-O-phosphono-D-ribitol | Unknown | NF2 | [O-]P(OC[C@H]1O[C@H]([C@H](O)[C@@H]1O)c1c(F)cc(F)c(c1)C)(=O)[O-] | 㑁 | nucleotide |
247 | 2000000060C | 5'-3,6-dihydrocytidylic acid | Cytidine | RY | [O-]P(OC[C@H]1O[C@H]([C@H](O)[C@@H]1O)N1CC=C(N)NC1=O)(=O)[O-] | 㐪 | nucleotide |
248 | 2000000011C | 5-fluorocytidine 5'-(dihydrogen phosphate) | Cytidine | 5CF | [O-]P(OC[C@H]1O[C@H]([C@H](O)[C@@H]1O)N1C=C(F)C(N)=NC1=O)(=O)[O-] | 㐭 | nucleotide |
249 | 2000000040G | 8-bromoguanosine 5'-(dihydrogen phosphate) | Guanosine | GRB | [O-]P(OC[C@H]1O[C@@H]([n]2c(Br)[n]c3C(NC(N)=Nc23)=O)[C@H](O)[C@@H]1O)(=O)[O-] | 㐸 | nucleotide |
258 | 2000000025X | [(2~{R},3~{S},4~{R},5~{S})-5-[1-methyl-2,4-bis(oxidanylidene)pyrimidin-5-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methyl dihydrogen phosphate | Unknown | B8H | [O-]P(OC[C@H]1O[C@H]([C@H](O)[C@@H]1O)C1C(NC(=O)N(C=1)C)=O)(=O)[O-] | 㑓 | nucleotide |
260 | 3000000028X | (5S)-5-{3-[(3S)-3-amino-3-carboxypropyl]-1-methyl-2,4-dioxo-1,2,3,4-tetrahydropyrimidin-5-yl}-2,5-anhydro-1-O-phosphono-L-arabinitol | Unknown | C4J | [O-]P(OC[C@@H]1O[C@H]([C@H](O)[C@@H]1O)C1C(N(CC[C@H](N)C(O)=O)C(=O)N(C=1)C)=O)(=O)[O-] | 㑄 | nucleotide |
261 | 3000000083A | 2'-deoxy-2'-fluoroadenosine 5'-(dihydrogen phosphate) | Adenosine | AF2 | [O-]P(OC[C@H]1O[C@H]([C@H](F)[C@@H]1O)[n]1c[n]c2c1[n]c[n]c2N)(=O)[O-] | 㐀 | nucleotide |
262 | 2000000037G | guanine arabinose-5'-phosphate | Guanosine | GAO | [O-]P(OC[C@H]1O[C@H]([C@@H](O)[C@@H]1O)[n]1c[n]c2C(=O)NC(N)=Nc21)(=O)[O-] | 㐺 | nucleotide |
263 | 3000000063G | 2-azanyl-9-[(2~{R},3~{R},4~{S})-3-oxidanyl-4-[oxidanyl-bis(oxidanylidene)-$l^{6}-phosphanyl]oxy-oxolan-2-yl]-1~{H}-purin-6-one | Guanosine | TG | NC1NC(=O)c2nc[n]([C@H]3[C@H](O)[C@@H](OP(=O)([O-])[O-])CO3)c2N=1 | 㐶 | nucleotide |
264 | 3000000075U | ((2S,3S,4R,5R)-5-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)-3-(2- ((((2R,5R)-5-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)- 3,4-dihydroxytetrahydrofuran-2-yl)methyl)amino)-2-oxoethyl)-4- hydroxytetrahydrofuran-2-yl)methyl phosphate | Uridine | URU | [O-]P(OC[C@H]1O[C@H]([C@H](O)[C@@H]1CC(NC[C@H]1O[C@@H](N2C(=O)NC(=O)C=C2)[C@H](O)[C@@H]1O)=O)N1C(NC(=O)C=C1)=O)(=O)[O-] | 㐿 | nucleotide |
265 | 5000000022A | adenosine-5'-(dithio)phosphate | Adenosine | ADS | [S-]P(OC[C@@H]1[C@H]([C@@H](O)[C@@H](O1)[n]1c[n]c2c1[n]c[n]c2N)O)(=O)[S-] | 㐡 | nucleotide |
266 | 3000000004A | 2'-amino-2'-deoxyadenosine | Adenosine | 2AD | N[C@H]1[C@H]([n]2c3c(c([n]c[n]3)N)[n]c2)O[C@H](COP(=O)([O-])[O-])[C@H]1O | 㐑 | nucleotide |
267 | 3000000001C | 4-amino-1-{2,5-anhydro-4-[(phosphonooxy)methyl]-alpha-L-lyxofuranosyl}pyrimidin-2(1H)-one | Cytidine | 10C | [O-]P(OC[C@]12O[C@@H](N3C(=O)N=C(N)C=C3)[C@H](OC1)[C@@H]2O)(=O)[O-] | 㐩 | nucleotide |
269 | 3000000070U | 2'-F,4'-beta-OMe Uridine 5'-(dihydrogen phosphate) | Uridine | UFB | [O-]P(OC[C@@]1(O[C@@H](N2C(=O)NC(=O)C=C2)[C@H](F)[C@@H]1O)OC)(=O)[O-] | 㑍 | nucleotide |
271 | 3000000015A | 3'-amino-3'-deoxyadenosine 5'-(dihydrogen phosphate) | Adenosine | 8AN | [O-]P(OC[C@H]1O[C@H]([C@H](O)[C@@H]1N)[n]1c[n]c2c1[n]c[n]c2N)(=O)[O-] | 㐓 | nucleotide |
272 | 3000000067U | 1-(2,6-dideoxy-2-fluoro-5-O-phosphono-alpha-L-talofuranosyl)pyrimidine-2,4(1H,3H)-dione | Uridine | U5M | [O-]P(O[C@@H](C)[C@H]1O[C@@H](N2C(=O)NC(=O)C=C2)[C@H](F)[C@@H]1O)(=O)[O-] | 㑇 | nucleotide |
273 | 3000000074U | 2'-OMe,4'beta-OMe uridine 5'-(dihydrogen phosphate) | Uridine | UOB | [O-]P(OC[C@]1(OC)O[C@@H](N2C(=O)NC(=O)C=C2)[C@@H]([C@@H]1O)OC)(=O)[O-] | 㑏 | nucleotide |
274 | 1000000038G | 3'-deoxyguanosine 5'-monophosphate | Guanosine | GDO | [O-]P(OC[C@H]1O[C@H]([C@H](O)C1)[n]1c[n]c2C(=O)NC(N)=Nc21)(=O)[O-] | 㐷 | nucleotide |
275 | 3000000039G | 2-amino-9-(6-deoxy-5-O-phosphono-beta-D-allofuranosyl)-3,9-dihydro-6H-purin-6-one | Guanosine | GMX | [O-]P(O[C@H](C)[C@H]1O[C@@H]([n]2c3NC(N)=NC(=O)c3[n]c2)[C@H](O)[C@@H]1O)(=O)[O-] | 㐵 | nucleotide |
276 | 3000000061C | 4'-thio-4'-deoxy-cytosine-5'-monophosphate | Cytidine | S4C | [O-]P(OC[C@H]1S[C@H]([C@H](O)[C@@H]1O)N1C(N=C(N)C=C1)=O)(=O)[O-] | 㐨 | nucleotide |
277 | 2000000020X | 3-ethynyl-1-(5-O-phosphono-beta-D-ribofuranosyl)-1H-pyrazolo[3,4-d]pyrimidin-4-amine | Unknown | A7E | [O-]P(OC[C@H]1O[C@H]([C@H](O)[C@@H]1O)[n]1[n]c(c2c1[n]c[n]c2N)C#C)(=O)[O-] | 㐖 | nucleotide |
278 | 2000000014X | 1-(5-O-phosphono-beta-D-ribofuranosyl)-3-(1H-1,2,3-triazol-5-yl)-1H-pyrazolo[3,4-d]pyrimidin-4-amine | Unknown | 7AT | [O-]P(OC[C@H]1O[C@H]([C@H](O)[C@@H]1O)[n]1[n]c(c2c1[n]c[n]c2N)-c1[nH][n][n]c1)(=O)[O-] | 㐐 | nucleotide |
279 | 5000000013C | 5'-O-[(dithiophosphono)]cytidine | Cytidine | 73W | NC1C=CN([C@H]2[C@H](O)[C@H](O)[C@@H](COP(=S)([S-])[O-])O2)C(=O)N=1 | 㐫 | nucleotide |
280 | 3000000072U | 2'-F-4'-OMe uridine 5'-monophosphate | Uridine | UMO | [O-]P(OC[C@]1(O[C@@H](N2C(=O)NC(=O)C=C2)[C@H](F)[C@@H]1O)OC)(=O)[O-] | 㑎 | nucleotide |
282 | 2000000054X | [(2~{R},3~{S},4~{R},5~{R})-5-(2-azanyl-6-diazanyl-purin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxyphosphinic acid | Unknown | O2Z | [O-]P(OC[C@H]1O[C@H]([C@H](O)[C@@H]1O)[n]1c[n]c2c1[n]c(N)[n]c2NN)(=O)[O-] | 㐞 | nucleotide |
283 | 3000000078G | 2'-SE-methyl-2'-selenoguanosine 5'-(dihydrogen phosphate) | Guanosine | XUG | [O-]P(OC[C@H]1O[C@@H]([n]2c3N=C(N)NC(=O)c3[n]c2)[C@@H]([C@@H]1O)[Se]C)(=O)[O-] | 㐇 | nucleotide |
284 | 3000000068U | 1-(2,6-dideoxy-2-fluoro-5-O-phosphono-beta-D-allofuranosyl)pyrimidine-2,4(1H,3H)-dione | Uridine | U5R | [O-]P(O[C@H](C)[C@H]1O[C@@H](N2C(=O)NC(=O)C=C2)[C@H](F)[C@@H]1O)(=O)[O-] | 㑈 | nucleotide |
285 | 2000000002X | N1-deaza-adenosine-5'-monophosphate | Unknown | 1DP | [O-]P(OC[C@H]1O[C@H]([C@H](O)[C@@H]1O)[n]1c2c([n]c1)c(N)cc[n]2)(=O)[O-] | 㐚 | nucleotide |
286 | 333000012Y | (2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic acid | Uridine | B8N | [O-]P(OC[C@H]1O[C@H]([C@H](O)[C@@H]1O)C1C(N(CC[C@@H](N)C(O)=O)C(=O)N(C=1)C)=O)(=O)[O-] | 㑃 | nucleotide |
287 | 2000000019X | 3-[1-(4-bromophenyl)-1H-1,2,3-triazol-4-yl]-1-[5-O-(trihydroxy-lambda~5~-phosphanyl)-beta-D-ribofuranosyl]-1H-pyrazolo[3,4-d]pyrimidin-4-amine | Unknown | A7C | Nc1c2c([n]([C@H]3[C@H](O)[C@H](O)[C@@H](COP(=O)([O-])[O-])O3)[n]c2-c2[n][n][n](-c3ccc(Br)cc3)c2)[n]c[n]1 | 㐕 | nucleotide |
288 | 3000000066U | 1-{2,5-dideoxy-2-fluoro-4-[(phosphonooxy)methyl]-alpha-L-lyxofuranosyl}pyrimidine-2,4(1H,3H)-dione | Uridine | U4M | [O-]P(OC[C@]1(O[C@@H](N2C(=O)NC(=O)C=C2)[C@H](F)[C@@H]1O)C)(=O)[O-] | 㑌 | nucleotide |
290 | 3000000057A | puromycin-5'-monophosphate | Adenosine | PPU | [O-]P(OC[C@H]1O[C@H]([C@H](O)[C@@H]1NC([C@@H](N)Cc1ccc(OC)cc1)=O)[n]1c[n]c2c1[n]c[n]c2N(C)C)(=O)[O-] | 㐤 | nucleotide |
291 | 2000000034C | N3-protonated cytidine-5'-monophosphate | Cytidine | CH | [O-]P(OC[C@H]1O[C@H]([C@H](O)[C@@H]1O)[N+]1=CC=C(N)NC1=O)(=O)[O-] | 㐰 | nucleotide |
292 | 2000000050X | 9-beta-D-ribofuranosyl-9H-purin-2-amine | Unknown | MTU | [O-]P(OC[C@H]1O[C@H]([C@H](O)[C@@H]1O)[n]1c[n]c2c1[n]c(N)[n]c2)(=O)[O-] | 㐙 | nucleotide |
293 | 2000000052X | ((2R,3S,4R,5S)-5-(2,6-diamino-9H-purin-9-YL)-3,4-dihydroxy-tetrahydrofuran-2-YL)methyl dihydrogen phosphate | Unknown | N6G | [O-]P(OC[C@H]1O[C@H]([C@H](O)[C@@H]1O)[n]1c[n]c2c1[n]c(N)[n]c2N)(=O)[O-] | 㐏 | nucleotide |
294 | 1000000007A | 3'-deoxyadenosine-5'-monophosphate | Adenosine | 3DA | [O-]P(OC[C@H]1O[C@H]([C@H](O)C1)[n]1c[n]c2c1[n]c[n]c2N)(=O)[O-] | 㐔 | nucleotide |
295 | 2000000024A | N1-protonated adenosine-5'-monophosphate | Adenosine | AP7 | [O-]P(OC[C@H]1O[C@H]([C@H](O)[C@@H]1O)[n]1c[n]c2c1[n]c[nH+]c2N)(=O)[O-] | 㐛 | nucleotide |
298 | 5000000009A | 5'-O-[(S)-hydroxy(methyl)phosphoryl]adenosine | Adenosine | 45A | CP(OC[C@@H]1[C@@H](O)[C@@H](O)[C@H]([n]2c3c(c(ncn3)N)nc2)O1)(=O)[O-] | 㐗 | nucleotide |
301 | 2000000051C | 5-nitrocytidine 5'-(dihydrogen phosphate) | Cytidine | N5M | [O-]P(OC[C@H]1O[C@H]([C@H](O)[C@@H]1O)N1C=C([N+]([O-])=O)C(N)=NC1=O)(=O)[O-] | 㐯 | nucleotide |
303 | 3000000021A | 2'-deoxy-2'-(4-ethyl-1H-1,2,3-triazol-1-yl)adenosine 5'-(dihydrogen phosphate) | Adenosine | A9Z | [O-]P(OC[C@H]1O[C@@H]([n]2c3[n]c[n]c(N)c3[n]c2)[C@@H]([C@@H]1O)[n]1[n][n]c(c1)CC)(=O)[O-] | 㐒 | nucleotide |
304 | 3000000023A | [(6-amino-9H-purin-9-YL)-[5-fluoro-1,3-dihydro-1-hydroxy-2,1-benzoxaborole]-4'YL]methyl dihydrogen phosphate | Adenosine | ANZ | [O-]P(OC[C@H]1O[C@@H]([n]2c3[n]c[n]c(N)c3[n]c2)[C@@H]2O[B@-]3(O[C@H]12)OCc1c3ccc(F)c1)(=O)[O-] | 㐟 | nucleotide |
305 | 2000000012C | 5-iodo-cytidine-5'-monophosphate | Cytidine | 5IC | [O-]P(OC[C@H]1O[C@H]([C@@H](O)[C@@H]1O)N1C=C(I)C(N)=NC1=O)(=O)[O-] | 㐮 | nucleotide |
306 | 3000000049C | 2'-(N-acetamide)-cytidine-5'-monophosphate | Cytidine | M5M | [O-]P(OC[C@H]1O[C@@H](N2C(=O)N=C(N)C=C2)[C@@H]([C@@H]1O)NC(=O)C)(=O)[O-] | 㐦 | nucleotide |
307 | 3000000003X | (E)-N-{[4-oxo-1-(5-O-phosphono-beta-D-arabinofuranosyl)-2-thioxo-1,2,3,4-tetrahydropyrimidin-5-yl]methylidene}glycin | Unknown | 1RN | [O-]P(OC[C@H]1O[C@H]([C@@H](O)[C@@H]1O)N1C=C(/C=N/CC(O)=O)C(NC1=S)=O)(=O)[O-] | 㑆 | nucleotide |
308 | 3000000035X | (5S,6R)-5-fluoro-6-hydroxy-pseudouridine-5'-monophosphate | Unknown | FHU | [O-]P(OC[C@H]1O[C@@H]([C@@]2(F)C(=O)NC(=O)N[C@@H]2O)[C@H](O)[C@@H]1O)(=O)[O-] | 㑅 | nucleotide |
309 | 3000000048X | (1S)-1,4-anhydro-1-(1-methyl-2,4-dioxo-1,2,3,4-tetrahydropyrimidin-5-yl)-5-O-phosphono-D-xylitol | Unknown | M1Y | [O-]P(OC[C@H]1O[C@H]([C@H](O)[C@H]1O)C1C(NC(=O)N(C=1)C)=O)(=O)[O-] | 㑀 | nucleotide |
313 | 3000000029C | cytosine arabinose-5'-phosphate | Cytidine | CAR | [O-]P(OC[C@H]1O[C@H]([C@@H](O)[C@@H]1O)N1C(N=C(N)C=C1)=O)(=O)[O-] | 㐲 | nucleotide |
314 | 3000000069U | uracil arabinose-5'-phosphate | Uridine | UAR | [O-]P(OC[C@H]1O[C@H]([C@@H](O)[C@@H]1O)N1C(NC(=O)C=C1)=O)(=O)[O-] | 㑔 | nucleotide |
315 | 3000000018A | adenine arabinose-5'-phosphate | Adenosine | A5O | [O-]P(OC[C@H]1O[C@H]([C@@H](O)[C@@H]1O)[n]1c[n]c2c1[n]c[n]c2N)(=O)[O-] | 㐠 | nucleotide |
316 | 3000000082A | 9-(2-deoxy-2-fluoro-5-O-phosphono-beta-D-arabinofuranosyl)-9H-purin-6-amine | Adenosine | A5L | [O-]P(OC[C@H]1O[C@H]([C@@H](F)[C@@H]1O)[n]1c[n]c2c1[n]c[n]c2N)(=O)[O-] | 㐁 | nucleotide |
319 | 3000000033C | 2'-deoxy-2'-fluorocytidine 5'-(dihydrogen phosphate) | Cytidine | CFZ | [O-]P(OC[C@H]1O[C@H]([C@H](F)[C@@H]1O)N1C(N=C(N)C=C1)=O)(=O)[O-] | 㐄 | nucleotide |
320 | 3000000071U | 2'-deoxy-2'-fluorouridine 5'-(dihydrogen phosphate) | Uridine | UFT | [O-]P(OC[C@H]1O[C@H]([C@H](F)[C@@H]1O)N1C(NC(=O)C=C1)=O)(=O)[O-] | 㐋 | nucleotide |
322 | 1000000076X | 1-(2-deoxy-5-O-phosphono-beta-D-erythro-pentofuranosyl)-5-methyl-2-selanylpyrimidin-4(1H)-one | Unknown | US3 | [O-]P(OC[C@H]1O[C@H](C[C@@H]1O)N1C([SeH])=NC(=O)C(=C1)C)(=O)[O-] | 㑖 | nucleotide |
323 | 3000000032C | 4-amino-1-(2-deoxy-2-fluoro-5-O-phosphono-beta-D-arabinofuranosyl)pyrimidin-2(1H)-one | Cytidine | CFL | [O-]P(OC[C@H]1O[C@H]([C@@H](F)[C@@H]1O)N1C(N=C(N)C=C1)=O)(=O)[O-] | 㐅 | nucleotide |
324 | 3000000073U | 2'-methylselenyl-2'-deoxyuridine-5'-phosphate | Uridine | UMS | [O-]P(OC[C@H]1O[C@@H](N2C(=O)NC(=O)C=C2)[C@@H]([C@@H]1O)[Se]C)(=O)[O-] | 㐌 | nucleotide |
325 | 3000000081A | N6-dimethyl-3'-amino-adenosine-5'-monophosphate | Adenosine | 5AA | [O-]P(OC[C@H]1O[C@H]([C@H](O)[C@@H]1N)[n]1c[n]c2c1[n]c[n]c2N(C)C)(=O)[O-] | 㐂 | nucleotide |
326 | 3000000036G | guanosine-P3-adenosine-5',5'-triphosphate | Guanosine | G3A | [O-][P@](OC[C@H]1O[C@@H]([n]2c3N=C(N)NC(=O)c3[n]c2)[C@H](O)[C@@H]1O)(O[P@@]([O-])(O[P@]([O-])(OC[C@H]1O[C@H]([C@H](O)[C@@H]1O)[n]1c[n]c2c1[n]c[n]c2N)=O)=O)=O | 㐽 | nucleotide |
327 | 2000000059X | D-ribofuranosyl-benzene-5'-monophosphate | Unknown | PYY | [O-]P(OC[C@H]1O[C@H]([C@H](O)[C@@H]1O)c1ccccc1)(=O)[O-] | 㐥 | nucleotide |
329 | 2000000016X | 8-aza-nebularine-5'-monophosphate | Unknown | 8AZ | [O-]P(OC[C@H]1O[C@H]([C@H](O)[C@@H]1O)[n]1c2c([C@@H](O)NC=N2)[n][n]1)(=O)[O-] | 㐘 | nucleotide |
330 | 4000000041G | guanosine-5'-thio-monophosphate | Guanosine | GS | NC1=Nc2c(ncn2[C@H]2C[C@H](O)[C@@H](COP([O-])([S-])=O)O2)C(=O)N1 | 㐼 | nucleotide |
447 | 1000000551A | [(2S,3S,5R)-3-amino-5-(6-aminopurin-9-yl)oxolan-2-yl]methyl dihydrogen phosphate" | Adenosine | A43 | c1nc(c2c(n1)n(cn2)[C@H]3C[C@@H]([C@H](O3)COP(=O)(O)O)N)N | 串 | nucleotide |
448 | 1000001551U | [(2S,3S,5R)-3-amino-5-(5-methyl-2,4-dioxo-pyrimidin-1-yl)oxolan-2-yl]methyl dihydrogen phosphate | Uridine | NYM | CC1=CN(C(=O)NC1=O)[C@H]2C[C@@H]([C@H](O2)COP(=O)(O)O)N | 乕 | nucleotide |
449 | 1000000551G | [(2S,3S,5R)-3-amino-5-(2-amino-6-oxo-1H-purin-9-yl)oxolan-2-yl]methyl dihydrogen phosphate | Guanosine | G38 | c1nc2c(n1[C@H]3C[C@@H]([C@H](O3)COP(=O)(O)O)N)N=C(NC2=O)N | 亞 | nucleotide |
450 | 4000015553G | [(2R,3S,5S)-3-hydroxy-5-(5-methyl-2,4-dioxopyrimidin-1-yl)oxolan-2-yl]methoxy-morpholin-4-ylphosphinicacid | Uridine | MU1 | 临 | nucleotide | |
451 | 1000000551G | [(2R,3S,5S)-5-(4-amino-2-oxopyrimidin-1-yl)-3-hydroxyoxolan-2-yl]methyl dihydrogen phosphate | Cytidine | D2C | C1[C@@H]([C@H](O[C@@H]1N2C=CC(=NC2=O)N)COP(=O)(O)O)O | 仩 | nucleotide |
452 | 1000000551G | [(2S,5R)-5-(2-amino-8-deuterio-6-oxo-1H-purin-9-yl)-3-hydroxyoxolan-2-yl]methylphosphonicacid | Guanosine | 2HG | [2H]c2nc1c(=O)[nH]c(N)nc1n2[C@H]3CC(O)[C@@H](CP(=O)(O)O)O3 | 亶 | nucleotide |
453 | 4000005553U | [(2R,3S,5S)-3-hydroxy-5-(5-methyl-2,4-dioxopyrimidin-1-yl)oxolan-2-yl]methyldihydrogenphosphate | Uridine | P1T | Cc2cn([C@@H]1C[C@H](O)[C@@H](COP(=O)(O)O)O1)c(=O)[nH]c2=O | 令 | nucleotide |
454 | 1000000551U | [(2R,3S,5R)-5-(6-amino-8-deuteriopurin-9-yl)-3-hydroxyoxolan-2-yl]phosphonicacid | Adenosine | 2HA | [2H]c2nc1c(N)ncnc1n2[C@H]3C[C@H](O)[C@@H](P(=O)(O)O)O3 | 从 | nucleotide |
455 | 40000025551U | [(2R,3S,5S)-3-hydroxy-5-(5-methyl-2,4-dioxopyrimidin-1-yl)oxolan-2-yl]methoxy-N-(2-methoxyethyl)phosphonamidicacid | Uridine | MU2 | COCCNP(=O)(O)OC[C@H]2O[C@H](n1cc(C)c(=O)[nH]c1=O)C[C@@H]2O | 乸 | nucleotide |
457 | 4000045551U | N-(2,2-dimethoxyethyl)-[[(2R,3S,5S)-3-hydroxy-5-(5-methyl-2,4-dioxopyrimidin-1-yl)oxolan-2-yl]methoxy]phosphonamidicacid | Uridine | MU4 | COC(CNP(=O)(O)OC[C@H]2O[C@H](n1cc(C)c(=O)[nH]c1=O)C[C@@H]2O)OC | 佨 | nucleotide |
458 | 3000000551A | [(2R,3S,5R)-5-(6-amino-8-deuteriopurin-9-yl)-3,4-dihydroxyoxolan-2-yl]phosphonicacid | Adenosine | AD2 | [2H]c2nc1c(N)ncnc1n2[C@@H]3O[C@H](P(=O)(O)O)[C@@H](O)C3O | 亃 | nucleotide |