ID Card:
Full name:
tRNA dimethylallyltransferase 2
Synonym:
IPT2, At2g27760
GI:
6006718
Orf:
F15K20
COG:
COG0324
UniProt:
Q9ZUX7
Alpha Fold Predicted Structure:
AF-Q9ZUX7-F1
Enzyme type:
dimethylallyltransferase predicted
Position of modification - modification:
t :37 - i6A
Protein sequence:
MMMLNPSNGGIEGEKMKKKAKVVVIMGPTGSGKSKLAVDLASHFPVEIINADAMQIYSGLDVLTNKVTVDEQKGVPHHLLGTVSSDMEFTARDFRDFTVPLIEEIVSRNHIPVLVGGTHYYIQAVVSKFLLDDAAEDTEECCADVASVVDQDMVVESVFGRDDLSHGYELLKELDPVAANRIHPNNHRKINQYLSLHASRGVLPSKLYQGKTAENWGCINASRFDYCLICMDAETAVLDRYVEQRVDAMVDAGLLDEVYDIYKPGADYTRGLRQSIGVREFEDFLKIHLSETCAGHLTSLSNDDKVMKENLRKILNFPKDDKLRIMLEEAIDRVKLNTRRLLRRQKRRVSRLETVFGWNIHYIDATEYILSKSEESWNAQVVKPASEIIRCFLETETESGRDPTSGKSIERDLWTQYVCEACGNKILRGRHEWEHHKQGRTHRKRTTRHKNSQTYKNREVQEAEVN
Comments:
This RNA modification enzyme is also involved in the cis-type cytokinin biosynthesis. Arabidopsis thaliana derived gene was shown to complement S. cerevisiae mutant lacking Mod5.
Alpha Fold Predicted Structure:
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Protein sequence:
M
M
M
L
N
P
S
N
G
G
I
E
G
E
K
M
K
K
K
A
K
V
V
V
I
M
G
P
T
G
S
G
K
S
K
L
A
V
D
L
A
S
H
F
P
V
E
I
I
N
A
D
A
M
Q
I
Y
S
G
L
D
V
L
T
N
K
V
T
V
D
E
Q
K
G
V
P
H
H
L
L
G
T
V
S
S
D
M
E
F
T
A
R
D
F
R
D
F
T
V
P
L
I
E
E
I
V
S
R
N
H
I
P
V
L
V
G
G
T
H
Y
Y
I
Q
A
V
V
S
K
F
L
L
D
D
A
A
E
D
T
E
E
C
C
A
D
V
A
S
V
V
D
Q
D
M
V
V
E
S
V
F
G
R
D
D
L
S
H
G
Y
E
L
L
K
E
L
D
P
V
A
A
N
R
I
H
P
N
N
H
R
K
I
N
Q
Y
L
S
L
H
A
S
R
G
V
L
P
S
K
L
Y
Q
G
K
T
A
E
N
W
G
C
I
N
A
S
R
F
D
Y
C
L
I
C
M
D
A
E
T
A
V
L
D
R
Y
V
E
Q
R
V
D
A
M
V
D
A
G
L
L
D
E
V
Y
D
I
Y
K
P
G
A
D
Y
T
R
G
L
R
Q
S
I
G
V
R
E
F
E
D
F
L
K
I
H
L
S
E
T
C
A
G
H
L
T
S
L
S
N
D
D
K
V
M
K
E
N
L
R
K
I
L
N
F
P
K
D
D
K
L
R
I
M
L
E
E
A
I
D
R
V
K
L
N
T
R
R
L
L
R
R
Q
K
R
R
V
S
R
L
E
T
V
F
G
W
N
I
H
Y
I
D
A
T
E
Y
I
L
S
K
S
E
E
S
W
N
A
Q
V
V
K
P
A
S
E
I
I
R
C
F
L
E
T
E
T
E
S
G
R
D
P
T
S
G
K
S
I
E
R
D
L
W
T
Q
Y
V
C
E
A
C
G
N
K
I
L
R
G
R
H
E
W
E
H
H
K
Q
G
R
T
H
R
K
R
T
T
R
H
K
N
S
Q
T
Y
K
N
R
E
V
Q
E
A
E
V
N
50 100 150 200 250 300 350 400 450 Sequence G H I T B S N
Secondary Structure Alphabet
G: 3-turn helix (310 helix) H: α-helix I: 𝝅-helix (5 - turn helix) T: Hydrogen Bonded Turn B: β-sheet S: Bend C: Coil (residues not present in any of the above conformations) N: Not assigned
Download PDB Structures & DSSP Secondary Structures:
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