Modomics - A Database of RNA Modifications

ID Card:

Full name: RNA-capping enzyme
Synonym: HCE, mRNA 5'-triphosphatase, GTP--RNA guanylyltransferase
GI: 6685628
Orf: RNGTT
COG: COG5226
UniProt: O60942
Structures: | 3S24 | 2C46 |
Alpha Fold Predicted Structure: AF-O60942-F1
Enzyme type: triphosphatase, guanylyltransferase
Position of modification - modification: m:0 - m7GpppN


PDB Structures:


3S24

Structure Description:

Title: CRYSTAL STRUCTURE OF THE HUMAN RNA guanylyltransferase and 5'- phosphatase
Classification: TRANSFERASE
Technique: X-Ray Diffraction
Resolution: 1.60
R value free: 0.234
R value observed: 0.206
R value work: 0.204

Abstract of the PDB Structure's related Publication:

Yet to be published

Download RCSB-PDB Structures:

Pdb Files   2C46.pdb   3S24.pdb  
Pdbx/mmCIF Files   2C46.cif   3S24.cif  


Protein sequence:

MAHNKIPPRWLNCPRRGQPVAGRFLPLKTMLGPRYDSQVAEENRFHPSMLSNYLKSLKVKMGLLVDLTNTSRFYDRNDIEKEGIKYIKLQCKGHGECPTTENTETFIRLCERFNERNPPELIGVHCTHGFNRTGFLICAFLVEKMDWSIEAAVATFAQARPPGIYKGDYLKELFRRYGDIEEAPPPPLLPDWCFEDDEDEDEDEDGKKESEPGSSASFGKRRKERLKLGAIFLEGVTVKGVTQVTTQPKLGEVQQKCHQFCGWEGSGFPGAQPVSMDKQNIKLLDLKPYKVSWKADGTRYMMLIDGTNEVFMIDRDNSVFHVSNLEFPFRKDLRMHLSNTLLDGEMIIDRVNGQAVPRYLIYDIIKFNSQPVGDCDFNVRLQCIEREIISPRHEKMKTGLIDKTQEPFSVRNKPFFDICTSRKLLEGNFAKEVSHEMDGLIFQPTGKYKPGRCDDILKWKPPSLNSVDFRLKITRMGGEGLLPQNVGLLYVGGYERPFAQIKVTKELKQYDNKIIECKFENNSWVFMRQRTDKSFPNAYNTAMAVCNSISNPVTKEMLFEFIDRCTAASQGQKRKHHLDPDTELMPPPPPKRPRPLT

Comments:

Bifunctional mRNA-capping enzyme exhibiting RNA 5'-triphosphatase activity in the N-terminal part and mRNA guanylyltransferase activity in the C-terminal part.





Alpha Fold Predicted Structure:




Downloading... [93946/552503]


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Protein sequence:

M A H N K I P P R W L N C P R R G Q P V A G R F L P L K T M L G P R Y D S Q V A E E N R F H P S M L S N Y L K S L K V K M G L L V D L T N T S R F Y D R N D I E K E G I K Y I K L Q C K G H G E C P T T E N T E T F I R L C E R F N E R N P P E L I G V H C T H G F N R T G F L I C A F L V E K M D W S I E A A V A T F A Q A R P P G I Y K G D Y L K E L F R R Y G D I E E A P P P P L L P D W C F E D D E D E D E D E D G K K E S E P G S S A S F G K R R K E R L K L G A I F L E G V T V K G V T Q V T T Q P K L G E V Q Q K C H Q F C G W E G S G F P G A Q P V S M D K Q N I K L L D L K P Y K V S W K A D G T R Y M M L I D G T N E V F M I D R D N S V F H V S N L E F P F R K D L R M H L S N T L L D G E M I I D R V N G Q A V P R Y L I Y D I I K F N S Q P V G D C D F N V R L Q C I E R E I I S P R H E K M K T G L I D K T Q E P F S V R N K P F F D I C T S R K L L E G N F A K E V S H E M D G L I F Q P T G K Y K P G R C D D I L K W K P P S L N S V D F R L K I T R M G G E G L L P Q N V G L L Y V G G Y E R P F A Q I K V T K E L K Q Y D N K I I E C K F E N N S W V F M R Q R T D K S F P N A Y N T A M A V C N S I S N P V T K E M L F E F I D R C T A A S Q G Q K R K H H L D P D T E L M P P P P P K R P R P L T
50100150200250300350400450500550SequenceGHITBSN

Secondary Structure Alphabet

  • G: 3-turn helix (310helix)
  • H: α-helix
  • I: 𝝅-helix (5 - turn helix)
  • T: Hydrogen Bonded Turn
  • B: β-sheet
  • S: Bend
  • C: Coil (residues not present in any of the above conformations)
  • N: Not assigned

Download PDB Structures & DSSP Secondary Structures:

Alpha Fold Pdb Files   AF-O60942-F1.pdb  
Alpha Fold Pdbx/mmCIF Files   AF-O60942-F1.cif  
DSSP Secondary Structures   O60942.dssp  





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