Modomics - A Database of RNA Modifications

ID Card:

Full name: ApaH-like phosphatase ALPH1
Orf: Tb927.6.640
UniProt: Q583T9
Alpha Fold Predicted Structure: AF-Q583T9-F1
Enzyme type: phosphatase



Protein sequence:

MTSSTLLEKLSSLKLSEGARVGGRTFRQGVMSPGTIANVTTTATTNINNTNVASAFASLMEKRQPTGSPAENEGPLRGLIIGSDGSGNNNNSSSNNNNNNNNNNSRSMKHSSNNSSTNSGNDKPIETQAPHRSGVEGSAGKAARKLRSSPRTHQLPDEMREKTSHISAVPRSVALALASASVGVTEQPSVTVEQLMRAAPSANVSSVTSPPRCVPTLPVEPMVVVDREGGPDAVRLATLVSGDPSNPKLIDPIDNVNAHKPIIRTVPPCDYRYIIVGDVHGCPEQLEELLLKVEFQQGKDCLIHVGDLVNKGPDSLAVVQLVQAKGAIGVLGNHDFTLLNCIARVKGKALSQQEEVDPVMRLASTFPQGCEDYIRSLPHILRIPQYNVIVVHAGLNVENSLEKQNVHEIMHLRRLERYTESSNNNNNNCGGKQQRNEKQRLRAVVKGSRGQPWGELWTGPECVVFGHDARAGLQELPFAYGIDTGCVYGGQLTAVVYGRDSPKGKLVSVTGLPKDANERRGLPPPAADVYEKYAEELERLILRPTPRATPAIIGYMQKPTFLSAPPPGSPAASTGSVINNSLRPDSCCSLPAASPSLSARATVRSSGVEQETLLSLLRAGEIRAVMTLMRLPAYESMWLNLLCSEVEGCTESFWIPFVKGVLDGLLNTRQNGEGDDYVEDLLQLVLEACDEFCSVREMAIPQLRKLQQRAEGGDFALPKATVKMLKLTVSPQNA

Comments:

ApaH-like phosphatase (ALPH1) as their major mRNA decapping enzyme in Trypanosoma brucei. The in vitro decapping experiments provide evidence for the decapping mechanism of ALPH1 being fundamentally different from the DCP2-mediated decapping. The data are consistent with ALPH1 leaving either a tri- or a diphosphate at the 5’ end of the decapped mRNA, instead of a monophosphate.





Alpha Fold Predicted Structure:




Parsing response... [633277/633277]


Clear Selection and Reset Camera

Protein sequence:

M T S S T L L E K L S S L K L S E G A R V G G R T F R Q G V M S P G T I A N V T T T A T T N I N N T N V A S A F A S L M E K R Q P T G S P A E N E G P L R G L I I G S D G S G N N N N S S S N N N N N N N N N N S R S M K H S S N N S S T N S G N D K P I E T Q A P H R S G V E G S A G K A A R K L R S S P R T H Q L P D E M R E K T S H I S A V P R S V A L A L A S A S V G V T E Q P S V T V E Q L M R A A P S A N V S S V T S P P R C V P T L P V E P M V V V D R E G G P D A V R L A T L V S G D P S N P K L I D P I D N V N A H K P I I R T V P P C D Y R Y I I V G D V H G C P E Q L E E L L L K V E F Q Q G K D C L I H V G D L V N K G P D S L A V V Q L V Q A K G A I G V L G N H D F T L L N C I A R V K G K A L S Q Q E E V D P V M R L A S T F P Q G C E D Y I R S L P H I L R I P Q Y N V I V V H A G L N V E N S L E K Q N V H E I M H L R R L E R Y T E S S N N N N N N C G G K Q Q R N E K Q R L R A V V K G S R G Q P W G E L W T G P E C V V F G H D A R A G L Q E L P F A Y G I D T G C V Y G G Q L T A V V Y G R D S P K G K L V S V T G L P K D A N E R R G L P P P A A D V Y E K Y A E E L E R L I L R P T P R A T P A I I G Y M Q K P T F L S A P P P G S P A A S T G S V I N N S L R P D S C C S L P A A S P S L S A R A T V R S S G V E Q E T L L S L L R A G E I R A V M T L M R L P A Y E S M W L N L L C S E V E G C T E S F W I P F V K G V L D G L L N T R Q N G E G D D Y V E D L L Q L V L E A C D E F C S V R E M A I P Q L R K L Q Q R A E G G D F A L P K A T V K M L K L T V S P Q N A
100200300400500600700SequenceGHITBSN

Secondary Structure Alphabet

  • G: 3-turn helix (310helix)
  • H: α-helix
  • I: 𝝅-helix (5 - turn helix)
  • T: Hydrogen Bonded Turn
  • B: β-sheet
  • S: Bend
  • C: Coil (residues not present in any of the above conformations)
  • N: Not assigned

Download PDB Structures & DSSP Secondary Structures:

Alpha Fold Pdb Files   AF-Q583T9-F1.pdb  
Alpha Fold Pdbx/mmCIF Files   AF-Q583T9-F1.cif  
DSSP Secondary Structures   Q583T9.dssp  





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