Modomics - A Database of RNA Modifications

ID Card:

Full name: NAD-capped RNA hydrolase NUDT3
GI: 68565856
UniProt: O95989
Structures: | 2FVV | 2Q9P | 6PCK | 6PCL | 6WO7 | 6WO8 | 6WO9 | 6WOA | 6WOB | 6WOC | 6WOD | 6WOE | 6WOF | 6WOG | 6WOH | 6WOI | 7TN4 |
Alpha Fold Predicted Structure: AF-O95989-F1
Enzyme type: hydrolase


PDB Structures:


2FVV

Structure Description:

Title: Human Diphosphoinositol polyphosphate phosphohydrolase 1
Classification: HYDROLASE
Technique: X-Ray Diffraction
Resolution: 1.25
R value free: 0.222
R value observed: 0.171
R value work: 0.171

Abstract of the PDB Structure's related Publication:

nan

Download RCSB-PDB Structures:

Pdb Files   2FVV.pdb   2Q9P.pdb   6PCK.pdb   6PCL.pdb   6WO7.pdb   6WO8.pdb   6WO9.pdb   6WOA.pdb   6WOC.pdb   6WOD.pdb   6WOE.pdb   6WOF.pdb   6WOG.pdb   6WOH.pdb   6WOI.pdb   6WOb.pdb   7TN4.pdb  
Pdbx/mmCIF Files   2FVV.cif   2Q9P.cif   6PCK.cif   6PCL.cif   6WO7.cif   6WO8.cif   6WO9.cif   6WOA.cif   6WOC.cif   6WOD.cif   6WOE.cif   6WOF.cif   6WOG.cif   6WOH.cif   6WOI.cif   6WOb.cif   7TN4.cif  


Protein sequence:

MMKLKSNQTRTYDGDGYKKRAACLCFRSESEEEVLLVSSSRHPDRWIVPGGGMEPEEEPSVAAVREVCEEAGVKGTLGRLVGIFENQERKHRTYVYVLIVTEVLEDWEDSVNIGRKREWFKIEDAIKVLQYHKPVQASYFETLRQGYSANNGTPVVATTYSVSAQSSMSGIR

Comments:

Nudt3 decapping activity normally functions to control cell migration





Alpha Fold Predicted Structure:




Parsing response... [165046/165046]


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Protein sequence:

M M K L K S N Q T R T Y D G D G Y K K R A A C L C F R S E S E E E V L L V S S S R H P D R W I V P G G G M E P E E E P S V A A V R E V C E E A G V K G T L G R L V G I F E N Q E R K H R T Y V Y V L I V T E V L E D W E D S V N I G R K R E W F K I E D A I K V L Q Y H K P V Q A S Y F E T L R Q G Y S A N N G T P V V A T T Y S V S A Q S S M S G I R
20406080100120140160MMKLKSNQTRTYDGDGYKKRAACLCFRSESEEEVLLVSSSRHPDRWIVPGGGMEPEEEPSVAAVREVCEEAGVKGTLGRLVGIFENQERKHRTYVYVLIVTEVLEDWEDSVNIGRKREWFKIEDAIKVLQYHKPVQASYFETLRQGYSANNGTPVVATTYSVSAQSSMSGIRSequenceHTBSN

Enter the variants

Position

Original

Variant

Secondary Structure Alphabet

  • G: 3-turn helix (310helix)
  • H: α-helix
  • I: 𝝅-helix (5 - turn helix)
  • T: Hydrogen Bonded Turn
  • B: β-sheet
  • S: Bend
  • C: Coil (residues not present in any of the above conformations)
  • N: Not assigned

Download PDB Structures & DSSP Secondary Structures:

Alpha Fold Pdb Files   AF-O95989-F1.pdb  
Alpha Fold Pdbx/mmCIF Files   AF-O95989-F1.cif  
DSSP Secondary Structures   O95989.dssp  





Publications: