Modomics - A Database of RNA Modifications

ID Card:

Full name: 18S rRNA aminocarboxypropyltransferase
UniProt: Q9UJK0
Alpha Fold Predicted Structure: AF-Q9UJK0-F1
Enzyme type: methyltransferase



Protein sequence:

MGRRRAARGPGAEGGRPRHLPTRSLEAFAEEVGAALQASVEPGAADGEGGPGPAALPCTLAMWELGHCDPRRCTGRKLARLGLVRCLRLGHRFGGLVLSPVGKQYASPADRQLVAQSGVAVIDCSWARLDETPFGKMRGSHLRLLPYLVAANPVNYGRPYRLSCVEAFAATFCIVGFPDLAVILLRKFKWGKGFLDLNRQLLDKYAACGSPEEVLQAEQEFLANAKESPQEEEIDPFDVDSGREFGNPNRPVASTRLPSDTDDSDASEDPGPGAERGGASSSCCEEEQTQGRGAEARAPAEVWKGIKKRQRD

Comments:

Aminocarboxypropyltransferase that catalyzes the aminocarboxypropyl transfer on pseudouridine at position 1248 (Psi1248) in 18S rRNA (Probable). It constitutes the last step in biosynthesis of the hypermodified N1-methyl-N3-(3-amino-3-carboxy propyl) pseudouridine (m1acp3-Psi) conserved in eukaryotic 18S rRNA (Meyer et a. 2016 )





Alpha Fold Predicted Structure:






Clear Selection and Reset Camera

Protein sequence:

M G R R R A A R G P G A E G G R P R H L P T R S L E A F A E E V G A A L Q A S V E P G A A D G E G G P G P A A L P C T L A M W E L G H C D P R R C T G R K L A R L G L V R C L R L G H R F G G L V L S P V G K Q Y A S P A D R Q L V A Q S G V A V I D C S W A R L D E T P F G K M R G S H L R L L P Y L V A A N P V N Y G R P Y R L S C V E A F A A T F C I V G F P D L A V I L L R K F K W G K G F L D L N R Q L L D K Y A A C G S P E E V L Q A E Q E F L A N A K E S P Q E E E I D P F D V D S G R E F G N P N R P V A S T R L P S D T D D S D A S E D P G P G A E R G G A S S S C C E E E Q T Q G R G A E A R A P A E V W K G I K K R Q R D
50100150200250300SequenceGHTBSN

Secondary Structure Alphabet

  • G: 3-turn helix (310helix)
  • H: α-helix
  • I: 𝝅-helix (5 - turn helix)
  • T: Hydrogen Bonded Turn
  • B: β-sheet
  • S: Bend
  • C: Coil (residues not present in any of the above conformations)
  • N: Not assigned

Download PDB Structures & DSSP Secondary Structures:

Alpha Fold Pdb Files   AF-Q9UJK0-F1.pdb  
Alpha Fold Pdbx/mmCIF Files   AF-Q9UJK0-F1.cif  
DSSP Secondary Structures   Q9UJK0.dssp  





Publications: