Modomics - A Database of RNA Modifications

ID Card:

Full name: tRNA modification GTPase MSS1
Synonym: Pet53
GI: 1709142
Orf: YMR023C
COG: COG0486
UniProt: P32559
Alpha Fold Predicted Structure: AF-P32559-F1
Complex: Mss1/Mto1
Enzyme type: GTPase



Protein sequence:

MNSASFLQSRLISRSFLVRRSLKRYSGLAKPYTFQQPTIYALSTPANQTSAIAIIRISGTHAKYIYNRLVDSSTVPPIRKAILRNIYSPSSCSVKPHDQKESKILLDTSLLLYFQAPYSFTGEDVLELHVHGGKAVVNSILKAIGSLHDRSSGKDIRFALPGDFSRRAFQNGKFDLTQLEGIKDLIDSETESQRRSALSSFNGDNKILFENWRETIIENMAQLTAIIDFADDNSQEIQNTDEIFHNVEKNIICLRDQIVTFMQKVEKSTILQNGIKLVLLGAPNVGKSSLVNSLTNDDISIVSDIPGTTRDSIDAMINVNGYKVIICDTAGIREKSSDKIEMLGIDRAKKKSVQSDLCLFIVDPTDLSKLLPEDILAHLSSKTFGNKRIIIVVNKSDLVSDDEMTKVLNKLQTRLGSKYPILSVSCKTKEGIESLISTLTSNFESLSQSSADASPVIVSKRVSEILKNDVLYGLEEFFKSKDFHNDIVLATENLRYASDGIAKITGQAIGIEEILDSVFSKFCIGK

Comments:

Yeast mitochondrial homolog of bacterial GTPase MnmE. Makes a stable complex with Mto1p. Does not work on cytoplasmic tRNAs.





Alpha Fold Predicted Structure:




Downloading... [36602/473330]


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Protein sequence:

M N S A S F L Q S R L I S R S F L V R R S L K R Y S G L A K P Y T F Q Q P T I Y A L S T P A N Q T S A I A I I R I S G T H A K Y I Y N R L V D S S T V P P I R K A I L R N I Y S P S S C S V K P H D Q K E S K I L L D T S L L L Y F Q A P Y S F T G E D V L E L H V H G G K A V V N S I L K A I G S L H D R S S G K D I R F A L P G D F S R R A F Q N G K F D L T Q L E G I K D L I D S E T E S Q R R S A L S S F N G D N K I L F E N W R E T I I E N M A Q L T A I I D F A D D N S Q E I Q N T D E I F H N V E K N I I C L R D Q I V T F M Q K V E K S T I L Q N G I K L V L L G A P N V G K S S L V N S L T N D D I S I V S D I P G T T R D S I D A M I N V N G Y K V I I C D T A G I R E K S S D K I E M L G I D R A K K K S V Q S D L C L F I V D P T D L S K L L P E D I L A H L S S K T F G N K R I I I V V N K S D L V S D D E M T K V L N K L Q T R L G S K Y P I L S V S C K T K E G I E S L I S T L T S N F E S L S Q S S A D A S P V I V S K R V S E I L K N D V L Y G L E E F F K S K D F H N D I V L A T E N L R Y A S D G I A K I T G Q A I G I E E I L D S V F S K F C I G K
50100150200250300350400450500SequenceGHITBSN

Secondary Structure Alphabet

  • G: 3-turn helix (310helix)
  • H: α-helix
  • I: 𝝅-helix (5 - turn helix)
  • T: Hydrogen Bonded Turn
  • B: β-sheet
  • S: Bend
  • C: Coil (residues not present in any of the above conformations)
  • N: Not assigned

Download PDB Structures & DSSP Secondary Structures:

Alpha Fold Pdb Files   AF-P32559-F1.pdb  
Alpha Fold Pdbx/mmCIF Files   AF-P32559-F1.cif  
DSSP Secondary Structures   P32559.dssp  





Publications:

Links:

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