Modomics - A Database of RNA Modifications

ID Card:

Full name: Ribosome biogenesis protein KsgA
Synonym: HVO_2746
UniProt: D4GWA1
Enzyme type:
Position of modification - modification: :1450(None) - m6A
:1450(None) - m6,6A
:1451(None) - m6A
:1451(None) - m6,6A
Level of experimental evidence: 5
Level of experimental reliability: 5



Protein sequence:

nan

Comments:

Specifically dimethylates two adjacent adenosines in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. Belongs to the class I-like SAM-binding methyltransferase superfamily.




Reaction Substrate SubstrateType Position (Anti)Codon Modified (Anti)Codon Amino Acid Change Transcript Name Transcript Region Cellular Localization References
A:m6A rRNA (r) rRNA/rRNA/prokaryotic cytosol 1450
m6A:m6,6A rRNA (r) rRNA/rRNA/prokaryotic cytosol 1450
A:m6A rRNA (r) rRNA/rRNA/prokaryotic cytosol 1451
m6A:m6,6A rRNA (r) rRNA/rRNA/prokaryotic cytosol 1451



Publications:

Title Authors Journal Details PubMed Id DOI
RNomics and Modomics in the halophilic archaea Haloferax volcanii: identification of RNA modification genes. Grosjean H; Gaspin C; Marck C; Decatur WA; de Crécy-Lagard V BMC Genomics [details] 18844986 10.1186/1471-2164-9-470