Modomics - A Database of RNA Modifications
 ID Type Subtype Organism Sequence
 323 snRNA  U4  Homo sapiens  -ʍ#CPUUGBGC-AGUGGCAG-UAUCGUAGCCAAUGAGGUCUA----------------UCCGA-GGCGCGAUUA--UUGCUAA-UUGʍAAACUUPU------CCCAAPA--CCCCGCC--GU-GAC-GACUUG--------------------------CAAUA--UA--GUCGG-CAC-UGGCAAUUUUUGACAGUCUCUACGGA--------------------------------------------------------GACUG----------
 341 snRNA  U4  Rattus norvegicus  -ʍ#CPUUGBGC-AGUGGCAG-UAUCGUAGCCAAUGAGGUUUA----------------UCCGA-GGCGCGAUUA--UUGCUAA-UUGʍAAACUUPU------CCCAAPA--CCCCGCC--GU-GAC-GACUUG--------------------------CAAUA--UA--GUCGG-CAU-UGGCAAUUUUUGACAGUCUCUACGGAG-------------------------------------------------------ACUGG----------
 342 snRNA  U4  Gallus gallus  -ʍ#CPUUGBGC-AGUGGCAG-UAUCGUAGCCAAUGAGGUUAA----------------UCCGA-GGCGCGAUUA--UUGCUAA-UUGʍAAACUUPU------CCCAAPA--CCCCGCC--GU-GAC-GACUUG--------------------------CAAUA--UA--GUCGG-CAU-UGGCAAUUUUUGACAGUCUCUACGGAG-------------------------------------------------------ACUGG----------
 343 snRNA  U4  Mus musculus  -ʍ#CPUUGBGC-AGUGGCAG-UAUCGUAGCCAAUGAGGUUUA----------------UCCGA-GGCGCGAUUA--UUGCUAA-UUGʍAAACUUPU------CCCAAPA--CCCCGCC--AU-GAC-GACUUG--------------------------AAAU--AUA--GUCGG-CAU-UGGCAAUUUUUGACAGUCUCUACGGA--------------------------------------------------------GACUG----------
 344 snRNA  U4  Drosophila melanogaster  -ʍGCUUAGCGC-AGUGGCAA-UACCGUAACCAAUGAAGCCUC----------------CCUGA-GGUGCGGUUA--UUGCUAG-UUGʍAAACUUUA------ACCAACC---CACGCC--AU-GGG-ACGUG----------------------------AAAU--AC--CGUCC-ACUACGGCAAUUUUUGGAAGCCCPPACGAGG-------------------------------------------------------GCUAA----------
 345 snRNA  U4  Vicia faba  -AUCUZUGCGCZUGGGGCAA-UGACGUAGCUAGUGAGGUPCU---------------AACCGA-GGCGCGUCUA--PUGCUGG-UUGʍAAACUAPU------UGCCAAA---CCCCUC-UUA-GGC-UUGGG---------------------------CUUGG-GUU--CAAGC-CUU-UGAGAAUUUCUGGAAGGACUCCCUUUGGGG------------------------------------------------UAAAGUCUA----------
 360 snRNA  U4  Caenorhabditis elegans  -AGCUUUGCGC-UGGGGCGA-UAACGUGACCAAUGAGGCUUU----------------GC-GA-GGUGCGUUUA--UUGCUGG-UPGAAAACUUUP------CCCAAUU--GCCCGCG--AU-GUC-CCCUG---------------------------AAACA--UG--GGUGG-CAU-ACGCAAUUUUUGAACNCUCUAGGAGG--------------------------------------------------------CAGAA----------
 363 snRNA  U4  Leptomonas collosoma  AAGCCUUGCGC-AGGGAGAU--G-UGA-AC------------GCAAGAACCUCAGU-----GAUUGUUCAUUUA--GUGCUAUACUAʍAAACUCCA------#---------UACUCC--U----------------------------------------AU---------------A-CGGGAAUAUUUGCAUCCACCAAGGGUG-------------------------------------------------------GGGAA----------


In our latest update, we've incorporated new functionalities in the user interface to enhance data accessibility. Now, users have the option to download aligned sequences in FASTA format directly. Utilizing the available drop-down menus, you can not only view specific sequences but also filter the ones you wish to download. Check boxes allow you to choose between downloading sequences with or without modifications. Unlike the RNA sequences section, where filters are more dynamic, the alignment interface categorizes sequences based on Rfam families, leaving only the organism filter as a variable drop-down option.