Modomics - A Database of RNA Modifications

General Data

RNA Type mRNA
Original Source Sci-ModoM
Transcript ID: ENST00000456496
Gene ID: ENSG00000171130
Gene Name: ATP6V0E2
Sequence (UNICHARACTER ENCODING) GUUGCUAGAGAUACCGCCUGGAGGCCACUGAUCUGUAAAAGGGAUCUCUACAGAAGAUAGGGAUUUUUGAUCGCCAGAGAAGAAGGGAUAUGUGAGAUCCAAACGCCGAAGGAGGAAAGCAGGCUCCGUGGUCUCUUCCAGCCCUGAUGGAAGAAACUACCGAGCCUUAUUAUACUAGGUGCUUUCCACAUGCCUAUUCAUUUAAUCCUCCAGCAACCUUGUAAGAAGGGCCAUCCCAUUUUAUAUUUAAACAAACCUUAACUACUGACGCAAGGAGUCAAGGAUCUAAUCCCAAAGCCUCUGCCUGGUUCGCUGCAGAUGGAUGUCCGCGAGGACGCCAGCCCUCCGCCUCCCGCCGGGUCCCUGAACGCCGGCCCGGCCGGUCCAACCUCAUUCCGCUUCCCGCCAUCGAAACGCGAAGCCCCCGCCUUCCCCCAAACGUCUCAGCGCCGCUGGGGCCUUUCUGGCUGCGCCGCCUCCGACCCCAGGCCCCGGUCCGCGCCCGCCGCUCGCUAGUCCUGGGAGUGAGGAGAACGCGUGCUGAGGACCCGGCCAGAGGGACAGCGGGGACCGCCCUCCCGCUGCGUCUCUGAAAGCGAGGCCGUUCCUCCCGCGUCCGACCCCCGCGGGGCCGUCAGGUUCGGGGCGGCCCAGGCUGCGGGUCCGCAGGGCGCUUCGGGCCGAGCCGGCGCGGCGCGUGAAGGGCAGGGGACGCCCCGAAAGACCGCUGGGGUGGGACCCCAAGCUCCAGGGGUCUUUGGAAAUAAGAAUGCGGCGUGACGUUGGCUGUGCGGGCGCGGGGCUGACGCGGACCCUAUAACCCAUCGCCGAAACCGGGCGGCCGCGCCCCUAUUCCUCGGCAUUUCUCUCUGUCCGCGGCCCUGCUCAGCCAAUCAGCGAGUGGGCUCCUAGGCAGGUCCUGAGUGACAGCGCGGCGGGCUGGAUCAGGAGAUGCGCGUGCGCGGCCCGGCCCGGCUGAUCGCUUCGGGUGCUCGACUCCUGUUGCGCAUGCUCAGCGCGCUGCCCGGCUGGGGACCCGCGCACCUGCAGCGCCCGCUGCUCGGCCCUGCAPCCUGCCUGGGCAUCCUGCGCCCGGCCAUGACGGCGCACUCAUUCGCCCUCCCGGUCAUCAUCUUCACCACGUUCUGGGGCCUCGUCGGCAUCGCCGGGCCCUGGUUCGUGCCGAAGGGACCCAACCGCGGAGUGAUCAUCACCAUGCUGGUCGCCACCGCCGUCUGCUGUUACCUCUUCUGGCUCAUCGCCAPCCUGGCGCAGCUGAACCCCCUGUUCGGGCCCCAGCUGAAGAAUGAGЖCCAUCUGGUACGUGCGCUUCCUGUGGGAGUGACCCGCCGCCCCCGACCCAGGUGCCCAGCUCUCGGAAUGACUGUGGCUCCACUGUCCCUGACAACCCCUUCGUCCGGACCCUCCCCCACACAACUAUGUCUGGUCACCAGCUCCCUCCUGCUGGCACCCAGAGЖCCCGGACCCGCAGGGCCUGCCUGGUUCCUGGAAGUCUUCCCAGUCUUCCCAGCCAGCCCGGGCCCUGGGGAGCCCUGGGCACAGCAGCGGCCGAGGGGAUGUCCUGCUCCAAUACCCGCACUGCUCUGGAGUUUGCCCUCUUUCCCAAGGAGAUGCUGCUGGGGAGCUGGUAUGGGUGGGGUCUUUCCCUPUACЖGACGGGGCAGAUGCCAGGЖCUCAGCCCAPCCUGAGGAGGACACGUGUCCUCAUGGAGAGGGUGCUCCGGCCCAGGCGGGGGAGUCAGUGCCCAGUCAGCAGCUCUGCCACCAPCCUGCUGGGAACUGGGGGGGCCUCUAUUGGGUUAUAGGCAAGGCCUUUUCUCUGGCAUGGAAUUGUUAAUUUUCUGACACGUCUAGAUGUGAAAUUUCUGAAAAUGUUGAAGCAGAGAAACAUUCACACACAAAAAGCAACAUAGUCAUGUGGGUCCAGAUGGCCUCAGUCCUAGAUGUUGGCACCCUUUGCUGUGUCUCCUCAGAGUAUCCUGUUCCGCCUCCUGCCACCUGGACCUCCCUCAGUGGAUGUCUUCCCUCCCCCGACCCCAGCCUGUCAGUCCGAGCACAGUGCAGGUUUGGCUCUGACUUGGGCUUUUGGCUGCAGUGGGGGUGGAUUUCAGAGCCUCUCAUGGCAGCAUCUAAGUGACCAGAGCUGGGAUGAGAGAGGGGAAGGGGCAAUGUGAGUGGCGCUAUGGGACGGGCCAGCCCUGCUCCUGAGCCAGCCCCGCCCUCUGCCCCCUGGCCCUGGGCUCUGUGCUAGGGAUGGUGAAGAAUGGGGGCGUGCCAGCCUGGCAGGAGUGGGAAGCAACACGCAGGGGUCCCGGACCUCUCCAGCCUUGCCCUCACGCUUACCCGAGCUCCCAGUGUGGUUAGCACAGAGCUCACCCACCUUGCCUGGCUCCCAGCUGGGGCCUGUCCUCACUGGUGCUCCAGGGGAAGAAACGACAGCCUCACUUCUGUAUGGЖCUGCUGAUGUGGCCUGCCAPCCUGUUCAGCGGGCAUUGUCUUUGGAGCAGCAGGAGAAUAGGAUGCCUCUCACUCACAUGCCAGUUCCUGGCUGGCCAGCUGCUCAGGGCUCAGGCUGGGGCCUCCCAUUGACAPCCUCCCCCUACACUCCCUCUCUGAGCCUCCGUCGCCCCUCCUGUUGGGUAAGGGUGUUGAGUGUGACUUGUGCUGAAAACCUGGUUCAUAUAUAAUAAAUAAUGGUGAUGAAAA
Sequence (SHORT NAMES ENCODING) GUUGCUAGAGAUACCGCCUGGAGGCCACUGAUCUGUAAAAGGGAUCUCUACAGAAGAUAGGGAUUUUUGAUCGCCAGAGAAGAAGGGAUAUGUGAGAUCCAAACGCCGAAGGAGGAAAGCAGGCUCCGUGGUCUCUUCCAGCCCUGAUGGAAGAAACUACCGAGCCUUAUUAUACUAGGUGCUUUCCACAUGCCUAUUCAUUUAAUCCUCCAGCAACCUUGUAAGAAGGGCCAUCCCAUUUUAUAUUUAAACAAACCUUAACUACUGACGCAAGGAGUCAAGGAUCUAAUCCCAAAGCCUCUGCCUGGUUCGCUGCAGAUGGAUGUCCGCGAGGACGCCAGCCCUCCGCCUCCCGCCGGGUCCCUGAACGCCGGCCCGGCCGGUCCAACCUCAUUCCGCUUCCCGCCAUCGAAACGCGAAGCCCCCGCCUUCCCCCAAACGUCUCAGCGCCGCUGGGGCCUUUCUGGCUGCGCCGCCUCCGACCCCAGGCCCCGGUCCGCGCCCGCCGCUCGCUAGUCCUGGGAGUGAGGAGAACGCGUGCUGAGGACCCGGCCAGAGGGACAGCGGGGACCGCCCUCCCGCUGCGUCUCUGAAAGCGAGGCCGUUCCUCCCGCGUCCGACCCCCGCGGGGCCGUCAGGUUCGGGGCGGCCCAGGCUGCGGGUCCGCAGGGCGCUUCGGGCCGAGCCGGCGCGGCGCGUGAAGGGCAGGGGACGCCCCGAAAGACCGCUGGGGUGGGACCCCAAGCUCCAGGGGUCUUUGGAAAUAAGAAUGCGGCGUGACGUUGGCUGUGCGGGCGCGGGGCUGACGCGGACCCUAUAACCCAUCGCCGAAACCGGGCGGCCGCGCCCCUAUUCCUCGGCAUUUCUCUCUGUCCGCGGCCCUGCUCAGCCAAUCAGCGAGUGGGCUCCUAGGCAGGUCCUGAGUGACAGCGCGGCGGGCUGGAUCAGGAGAUGCGCGUGCGCGGCCCGGCCCGGCUGAUCGCUUCGGGUGCUCGACUCCUGUUGCGCAUGCUCAGCGCGCUGCCCGGCUGGGGACCCGCGCACCUGCAGCGCCCGCUGCUCGGCCCUGCAYCCUGCCUGGGCAUCCUGCGCCCGGCCAUGACGGCGCACUCAUUCGCCCUCCCGGUCAUCAUCUUCACCACGUUCUGGGGCCUCGUCGGCAUCGCCGGGCCCUGGUUCGUGCCGAAGGGACCCAACCGCGGAGUGAUCAUCACCAUGCUGGUCGCCACCGCCGUCUGCUGUUACCUCUUCUGGCUCAUCGCCAYCCUGGCGCAGCUGAACCCCCUGUUCGGGCCCCAGCUGAAGAAUGAGm6ACCAUCUGGUACGUGCGCUUCCUGUGGGAGUGACCCGCCGCCCCCGACCCAGGUGCCCAGCUCUCGGAAUGACUGUGGCUCCACUGUCCCUGACAACCCCUUCGUCCGGACCCUCCCCCACACAACUAUGUCUGGUCACCAGCUCCCUCCUGCUGGCACCCAGAGm6ACCCGGACCCGCAGGGCCUGCCUGGUUCCUGGAAGUCUUCCCAGUCUUCCCAGCCAGCCCGGGCCCUGGGGAGCCCUGGGCACAGCAGCGGCCGAGGGGAUGUCCUGCUCCAAUACCCGCACUGCUCUGGAGUUUGCCCUCUUUCCCAAGGAGAUGCUGCUGGGGAGCUGGUAUGGGUGGGGUCUUUCCCUYUACm6AGACGGGGCAGAUGCCAGGm6ACUCAGCCCAYCCUGAGGAGGACACGUGUCCUCAUGGAGAGGGUGCUCCGGCCCAGGCGGGGGAGUCAGUGCCCAGUCAGCAGCUCUGCCACCAYCCUGCUGGGAACUGGGGGGGCCUCUAUUGGGUUAUAGGCAAGGCCUUUUCUCUGGCAUGGAAUUGUUAAUUUUCUGACACGUCUAGAUGUGAAAUUUCUGAAAAUGUUGAAGCAGAGAAACAUUCACACACAAAAAGCAACAUAGUCAUGUGGGUCCAGAUGGCCUCAGUCCUAGAUGUUGGCACCCUUUGCUGUGUCUCCUCAGAGUAUCCUGUUCCGCCUCCUGCCACCUGGACCUCCCUCAGUGGAUGUCUUCCCUCCCCCGACCCCAGCCUGUCAGUCCGAGCACAGUGCAGGUUUGGCUCUGACUUGGGCUUUUGGCUGCAGUGGGGGUGGAUUUCAGAGCCUCUCAUGGCAGCAUCUAAGUGACCAGAGCUGGGAUGAGAGAGGGGAAGGGGCAAUGUGAGUGGCGCUAUGGGACGGGCCAGCCCUGCUCCUGAGCCAGCCCCGCCCUCUGCCCCCUGGCCCUGGGCUCUGUGCUAGGGAUGGUGAAGAAUGGGGGCGUGCCAGCCUGGCAGGAGUGGGAAGCAACACGCAGGGGUCCCGGACCUCUCCAGCCUUGCCCUCACGCUUACCCGAGCUCCCAGUGUGGUUAGCACAGAGCUCACCCACCUUGCCUGGCUCCCAGCUGGGGCCUGUCCUCACUGGUGCUCCAGGGGAAGAAACGACAGCCUCACUUCUGUAUGGm6ACUGCUGAUGUGGCCUGCCAYCCUGUUCAGCGGGCAUUGUCUUUGGAGCAGCAGGAGAAUAGGAUGCCUCUCACUCACAUGCCAGUUCCUGGCUGGCCAGCUGCUCAGGGCUCAGGCUGGGGCCUCCCAUUGACAYCCUCCCCCUACACUCCCUCUCUGAGCCUCCGUCGCCCCUCCUGUUGGGUAAGGGUGUUGAGUGUGACUUGUGCUGAAAACCUGGUUCAUAUAUAAUAAAUAAUGGUGAUGAAAA
Sequence (MODOMICS CODE ENCODING) GUUGCUAGAGAUACCGCCUGGAGGCCACUGAUCUGUAAAAGGGAUCUCUACAGAAGAUAGGGAUUUUUGAUCGCCAGAGAAGAAGGGAUAUGUGAGAUCCAAACGCCGAAGGAGGAAAGCAGGCUCCGUGGUCUCUUCCAGCCCUGAUGGAAGAAACUACCGAGCCUUAUUAUACUAGGUGCUUUCCACAUGCCUAUUCAUUUAAUCCUCCAGCAACCUUGUAAGAAGGGCCAUCCCAUUUUAUAUUUAAACAAACCUUAACUACUGACGCAAGGAGUCAAGGAUCUAAUCCCAAAGCCUCUGCCUGGUUCGCUGCAGAUGGAUGUCCGCGAGGACGCCAGCCCUCCGCCUCCCGCCGGGUCCCUGAACGCCGGCCCGGCCGGUCCAACCUCAUUCCGCUUCCCGCCAUCGAAACGCGAAGCCCCCGCCUUCCCCCAAACGUCUCAGCGCCGCUGGGGCCUUUCUGGCUGCGCCGCCUCCGACCCCAGGCCCCGGUCCGCGCCCGCCGCUCGCUAGUCCUGGGAGUGAGGAGAACGCGUGCUGAGGACCCGGCCAGAGGGACAGCGGGGACCGCCCUCCCGCUGCGUCUCUGAAAGCGAGGCCGUUCCUCCCGCGUCCGACCCCCGCGGGGCCGUCAGGUUCGGGGCGGCCCAGGCUGCGGGUCCGCAGGGCGCUUCGGGCCGAGCCGGCGCGGCGCGUGAAGGGCAGGGGACGCCCCGAAAGACCGCUGGGGUGGGACCCCAAGCUCCAGGGGUCUUUGGAAAUAAGAAUGCGGCGUGACGUUGGCUGUGCGGGCGCGGGGCUGACGCGGACCCUAUAACCCAUCGCCGAAACCGGGCGGCCGCGCCCCUAUUCCUCGGCAUUUCUCUCUGUCCGCGGCCCUGCUCAGCCAAUCAGCGAGUGGGCUCCUAGGCAGGUCCUGAGUGACAGCGCGGCGGGCUGGAUCAGGAGAUGCGCGUGCGCGGCCCGGCCCGGCUGAUCGCUUCGGGUGCUCGACUCCUGUUGCGCAUGCUCAGCGCGCUGCCCGGCUGGGGACCCGCGCACCUGCAGCGCCCGCUGCUCGGCCCUGCA2000000009UCCUGCCUGGGCAUCCUGCGCCCGGCCAUGACGGCGCACUCAUUCGCCCUCCCGGUCAUCAUCUUCACCACGUUCUGGGGCCUCGUCGGCAUCGCCGGGCCCUGGUUCGUGCCGAAGGGACCCAACCGCGGAGUGAUCAUCACCAUGCUGGUCGCCACCGCCGUCUGCUGUUACCUCUUCUGGCUCAUCGCCA2000000009UCCUGGCGCAGCUGAACCCCCUGUUCGGGCCCCAGCUGAAGAAUGAG2000000006ACCAUCUGGUACGUGCGCUUCCUGUGGGAGUGACCCGCCGCCCCCGACCCAGGUGCCCAGCUCUCGGAAUGACUGUGGCUCCACUGUCCCUGACAACCCCUUCGUCCGGACCCUCCCCCACACAACUAUGUCUGGUCACCAGCUCCCUCCUGCUGGCACCCAGAG2000000006ACCCGGACCCGCAGGGCCUGCCUGGUUCCUGGAAGUCUUCCCAGUCUUCCCAGCCAGCCCGGGCCCUGGGGAGCCCUGGGCACAGCAGCGGCCGAGGGGAUGUCCUGCUCCAAUACCCGCACUGCUCUGGAGUUUGCCCUCUUUCCCAAGGAGAUGCUGCUGGGGAGCUGGUAUGGGUGGGGUCUUUCCCU2000000009UUAC2000000006AGACGGGGCAGAUGCCAGG2000000006ACUCAGCCCA2000000009UCCUGAGGAGGACACGUGUCCUCAUGGAGAGGGUGCUCCGGCCCAGGCGGGGGAGUCAGUGCCCAGUCAGCAGCUCUGCCACCA2000000009UCCUGCUGGGAACUGGGGGGGCCUCUAUUGGGUUAUAGGCAAGGCCUUUUCUCUGGCAUGGAAUUGUUAAUUUUCUGACACGUCUAGAUGUGAAAUUUCUGAAAAUGUUGAAGCAGAGAAACAUUCACACACAAAAAGCAACAUAGUCAUGUGGGUCCAGAUGGCCUCAGUCCUAGAUGUUGGCACCCUUUGCUGUGUCUCCUCAGAGUAUCCUGUUCCGCCUCCUGCCACCUGGACCUCCCUCAGUGGAUGUCUUCCCUCCCCCGACCCCAGCCUGUCAGUCCGAGCACAGUGCAGGUUUGGCUCUGACUUGGGCUUUUGGCUGCAGUGGGGGUGGAUUUCAGAGCCUCUCAUGGCAGCAUCUAAGUGACCAGAGCUGGGAUGAGAGAGGGGAAGGGGCAAUGUGAGUGGCGCUAUGGGACGGGCCAGCCCUGCUCCUGAGCCAGCCCCGCCCUCUGCCCCCUGGCCCUGGGCUCUGUGCUAGGGAUGGUGAAGAAUGGGGGCGUGCCAGCCUGGCAGGAGUGGGAAGCAACACGCAGGGGUCCCGGACCUCUCCAGCCUUGCCCUCACGCUUACCCGAGCUCCCAGUGUGGUUAGCACAGAGCUCACCCACCUUGCCUGGCUCCCAGCUGGGGCCUGUCCUCACUGGUGCUCCAGGGGAAGAAACGACAGCCUCACUUCUGUAUGG2000000006ACUGCUGAUGUGGCCUGCCA2000000009UCCUGUUCAGCGGGCAUUGUCUUUGGAGCAGCAGGAGAAUAGGAUGCCUCUCACUCACAUGCCAGUUCCUGGCUGGCCAGCUGCUCAGGGCUCAGGCUGGGGCCUCCCAUUGACA2000000009UCCUCCCCCUACACUCCCUCUCUGAGCCUCCGUCGCCCCUCCUGUUGGGUAAGGGUGUUGAGUGUGACUUGUGCUGAAAACCUGGUUCAUAUAUAAUAAAUAAUGGUGAUGAAAA

Score Table

Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.
Method Classification Score
Multiple direct experimental evidence 1
Direct experimental evidence 2
Inferred based on indirect experimental evidence 3
Predicted computationally 4
Evidence not yet annotated (Unknown) 5
Irrelevant 6

Modification Positions

Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.

Position in the Sequence 1072 1265 1312 1477 1668 1672 1691 1701 1785 2473 2493 2608
Modification Positions Y Y m6A m6A Y m6A m6A Y Y m6A Y Y
Genomic Coordinates 7:149874039:+ 7:149878692:+ 7:149878739:+ 7:149879448:+ 7:149879639:+ 7:149879643:+ 7:149879662:+ 7:149879672:+ 7:149879756:+ 7:149880444:+ 7:149880464:+ 7:149880579:+
Level of Experimental Evidence 3 3 3 3 3 3 3 3 3 3 3 3
Level of Experimental Reliability 3 3 3 3 3 3 3 3 3 3 3 3
Source Sci-ModoM Sci-ModoM Sci-ModoM Sci-ModoM Sci-ModoM Sci-ModoM Sci-ModoM Sci-ModoM Sci-ModoM Sci-ModoM Sci-ModoM Sci-ModoM
EUFIDs BtsJQJ3DteUq
bXBqJigD9oV3
f6YSioLdAWpr
JkWoGWVwjNda
Yfn77uLS5tv8
BtsJQJ3DteUq
bXBqJigD9oV3
f6YSioLdAWpr
S9vNeQQYrhac
JkWoGWVwjNda
Yfn77uLS5tv8
BtsJQJ3DteUq
bXBqJigD9oV3
f6YSioLdAWpr
S9vNeQQYrhac
JkWoGWVwjNda
Yfn77uLS5tv8
BtsJQJ3DteUq
bXBqJigD9oV3
f6YSioLdAWpr
S9vNeQQYrhac
JkWoGWVwjNda
Yfn77uLS5tv8
BtsJQJ3DteUq
bXBqJigD9oV3
f6YSioLdAWpr
JkWoGWVwjNda
Yfn77uLS5tv8
3kRDPWwiRCgi
L6w2k2VEv4EY
4HMi5ykupT9V
5aTkEfEpX8Xm
5Nnepx5V7yHo
aHkqKEJkRYyb
gBgcfFQ5WN9C
Mg9GixDBFQAT
msuJfBpJvM5H
VyCX26p5UBRL
ArijeGVTwYBw
BkoLW2CBToyL
834aFpha8RvT
dA7YoLwHrzgR
JASnTTw2HeNE
ksEP666umrV9
NKGM8wdLLrnu
ZuM5xpZmNuDL
BtsJQJ3DteUq
bXBqJigD9oV3
f6YSioLdAWpr
S9vNeQQYrhac
JkWoGWVwjNda
a7o5Kmjr4Tdp
Yfn77uLS5tv8
BtsJQJ3DteUq
bXBqJigD9oV3
f6YSioLdAWpr
S9vNeQQYrhac
JkWoGWVwjNda
a7o5Kmjr4Tdp
Yfn77uLS5tv8
BtsJQJ3DteUq
bXBqJigD9oV3
f6YSioLdAWpr
S9vNeQQYrhac
JkWoGWVwjNda
a7o5Kmjr4Tdp
Yfn77uLS5tv8
4HMi5ykupT9V
5aTkEfEpX8Xm
5Nnepx5V7yHo
aHkqKEJkRYyb
gBgcfFQ5WN9C
Mg9GixDBFQAT
msuJfBpJvM5H
VyCX26p5UBRL
aJksAshEgQ8U
93arJtwJmuS9
BkoLW2CBToyL
nfCHyrYzE6fB
KENzb7mwdBd9
KjeH7Nsffuas
Lny8GcCeVGc9
PF5iqBNSbHaa
UKen6WEino9G
BtsJQJ3DteUq
bXBqJigD9oV3
f6YSioLdAWpr
iezFbUdmY3A6
S9vNeQQYrhac
JkWoGWVwjNda
a7o5Kmjr4Tdp
Yfn77uLS5tv8
BtsJQJ3DteUq
bXBqJigD9oV3
f6YSioLdAWpr
XWZVGdLC6gGJ
iezFbUdmY3A6
S9vNeQQYrhac
JkWoGWVwjNda
a7o5Kmjr4Tdp
Yfn77uLS5tv8
BtsJQJ3DteUq
bXBqJigD9oV3
f6YSioLdAWpr
XWZVGdLC6gGJ
iezFbUdmY3A6
S9vNeQQYrhac
JkWoGWVwjNda
a7o5Kmjr4Tdp
Yfn77uLS5tv8