General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000543409
Gene ID:	ENSG00000130675
Gene Name:	MNX1
Sequence (UNICHARACTER ENCODING)	UCUCUUAACGGGAAGGGGCAGUUGGAGGUGUGAGACUGAGAUCUAAUGAUUAACCCGAAGGCUGCAGGAGAAGGAAGUCGCCGGGGGAAGGCGAGCCGAGAGCGCCCUGAAUUAGGCAGGCCCGGGAAUGGGGGUCAGGGCUUAUCACCGGGGAAAGGAACUUGGGCCAGGUCCCCCACUGGGGCGUUAGAGAGACCCGCGGCCCCUCCAGGGAGAGGGAGUGCUUCAGGAGCAGCAAACAAGAGAAAUGGGCUUCGGAGGCCCGGGGAGGCAAGGCCAAGGCCCAGGGAACCCCCGGCUCUUACCAGGGCGCUGCCCUCCUCUGGAAGGGCGUUGGAUCCGGGGUGCGAUGGCCGAGGCAGGUGGCCUGGCUUGAACCAGCUAUGGGGGGЖCUCUCAACAGUAGGUGCCUGCCCUGGAAUCCUGGGCGCCCAACAAGCCCAGGCGCAGUCGAACCUCCUGGGGAAGUGCCGCCGGCCGCGCACCGCCUUCACCAGCCAGCAGCUGCUGGAGCUGGAGCACCAGUUCAAGCUCAACAAGUACCUGUCGCGGCCCAAGCGCUUCGAGGUGGCCACCUCGCUCAUGCUCACCGAGACCCAGGUGAAGAUUUGGUUCCAGAACCGGCGGAUGAAAUGGAAACGCAGCAAAAAGGCCAAAGAGCAGGCGGCGCAGGAAGCGGAGAAACAGAAGGGCGGCGGCGGGGGCGCGGGGAAGGGCGGCGCGGAGGAGCCGGGAGCCGAGGAGCUGCUGGGGCCGCCAGCGCCCGGAGACAAGGGCAGCGGACGCCGCCUGCGGGЖCUUGAGGGЖCAGUGACCCCGAGGAGGACGAGGACGAGGACGACGAGGACCAUUUCCCCUACAGCAACGGCGCCAGCGUCCACGCCGCCUCCUCCGACUGCUCCUCGGAGGACGACUCGCCGCCCCCGCGGCCCAGCCACCAGCCCGCGCCCCAGUAGGAGCCCCGCGGCCCAGCAGGUGCGGCGCGCACGGAGCGCCCCGGCCGGCGGCUUCUCCCGGAGGCCCCGGCGCCCGCACCCACCCGGCCCGGCCCCGAGAGCAGGCUCGACCGCCGCCCCAUGGЖCCCCUCGCCCAGGCCGGGGCUGGAGGGAUUCGGCCGCGGCUCCGGUCCUGGGCGCUUCCCUUUUAAGCAAGGGCGCCUCACCUGCUCUUCAAGAAACAGCGAGAGGGAGЖCCCAGGGGGCUGAAЖCUUGAЖCUCUGGUUCUUUUAAAAUUAAUUUUGGUUGGUGUUGGGGGAGGCGCGAGUGCGUGUGAGAAGAACCGACCCACCCCGCGCAAGGGGAAGCCUCCUGUCUCCCCUUUCCCCGCGUCCGAGAAGGCGGAAACCCACAGUGUUACCUGЖCUUAUGAAACUUGAAACCGCCUCUGGAGCCGCCAUUCUGCAGAGUAUUUGGAAAAAGAAAAAAGGGUUUAUGCUUACGUCUCUGGGGUCGGGGGGAUUAUGUCACGAGCGUUCAAACUGCUGGAAAUCUCAAAACUGUACUGUCUPUAUUUUUGUAUAUUGUAUUUAUAUAUAAAAAGAAACGUCUACGUAUGCAUGCUAAAUUAUUAUUUAGCUUCUCCCAUCGCCCACGAUGGAAUGUAAAAUAAAUUGGUUUUGUACUGGAU
Sequence (SHORT NAMES ENCODING)	UCUCUUAACGGGAAGGGGCAGUUGGAGGUGUGAGACUGAGAUCUAAUGAUUAACCCGAAGGCUGCAGGAGAAGGAAGUCGCCGGGGGAAGGCGAGCCGAGAGCGCCCUGAAUUAGGCAGGCCCGGGAAUGGGGGUCAGGGCUUAUCACCGGGGAAAGGAACUUGGGCCAGGUCCCCCACUGGGGCGUUAGAGAGACCCGCGGCCCCUCCAGGGAGAGGGAGUGCUUCAGGAGCAGCAAACAAGAGAAAUGGGCUUCGGAGGCCCGGGGAGGCAAGGCCAAGGCCCAGGGAACCCCCGGCUCUUACCAGGGCGCUGCCCUCCUCUGGAAGGGCGUUGGAUCCGGGGUGCGAUGGCCGAGGCAGGUGGCCUGGCUUGAACCAGCUAUGGGGGGm6ACUCUCAACAGUAGGUGCCUGCCCUGGAAUCCUGGGCGCCCAACAAGCCCAGGCGCAGUCGAACCUCCUGGGGAAGUGCCGCCGGCCGCGCACCGCCUUCACCAGCCAGCAGCUGCUGGAGCUGGAGCACCAGUUCAAGCUCAACAAGUACCUGUCGCGGCCCAAGCGCUUCGAGGUGGCCACCUCGCUCAUGCUCACCGAGACCCAGGUGAAGAUUUGGUUCCAGAACCGGCGGAUGAAAUGGAAACGCAGCAAAAAGGCCAAAGAGCAGGCGGCGCAGGAAGCGGAGAAACAGAAGGGCGGCGGCGGGGGCGCGGGGAAGGGCGGCGCGGAGGAGCCGGGAGCCGAGGAGCUGCUGGGGCCGCCAGCGCCCGGAGACAAGGGCAGCGGACGCCGCCUGCGGGm6ACUUGAGGGm6ACAGUGACCCCGAGGAGGACGAGGACGAGGACGACGAGGACCAUUUCCCCUACAGCAACGGCGCCAGCGUCCACGCCGCCUCCUCCGACUGCUCCUCGGAGGACGACUCGCCGCCCCCGCGGCCCAGCCACCAGCCCGCGCCCCAGUAGGAGCCCCGCGGCCCAGCAGGUGCGGCGCGCACGGAGCGCCCCGGCCGGCGGCUUCUCCCGGAGGCCCCGGCGCCCGCACCCACCCGGCCCGGCCCCGAGAGCAGGCUCGACCGCCGCCCCAUGGm6ACCCCUCGCCCAGGCCGGGGCUGGAGGGAUUCGGCCGCGGCUCCGGUCCUGGGCGCUUCCCUUUUAAGCAAGGGCGCCUCACCUGCUCUUCAAGAAACAGCGAGAGGGAGm6ACCCAGGGGGCUGAAm6ACUUGAm6ACUCUGGUUCUUUUAAAAUUAAUUUUGGUUGGUGUUGGGGGAGGCGCGAGUGCGUGUGAGAAGAACCGACCCACCCCGCGCAAGGGGAAGCCUCCUGUCUCCCCUUUCCCCGCGUCCGAGAAGGCGGAAACCCACAGUGUUACCUGm6ACUUAUGAAACUUGAAACCGCCUCUGGAGCCGCCAUUCUGCAGAGUAUUUGGAAAAAGAAAAAAGGGUUUAUGCUUACGUCUCUGGGGUCGGGGGGAUUAUGUCACGAGCGUUCAAACUGCUGGAAAUCUCAAAACUGUACUGUCUYUAUUUUUGUAUAUUGUAUUUAUAUAUAAAAAGAAACGUCUACGUAUGCAUGCUAAAUUAUUAUUUAGCUUCUCCCAUCGCCCACGAUGGAAUGUAAAAUAAAUUGGUUUUGUACUGGAU
Sequence (MODOMICS CODE ENCODING)	UCUCUUAACGGGAAGGGGCAGUUGGAGGUGUGAGACUGAGAUCUAAUGAUUAACCCGAAGGCUGCAGGAGAAGGAAGUCGCCGGGGGAAGGCGAGCCGAGAGCGCCCUGAAUUAGGCAGGCCCGGGAAUGGGGGUCAGGGCUUAUCACCGGGGAAAGGAACUUGGGCCAGGUCCCCCACUGGGGCGUUAGAGAGACCCGCGGCCCCUCCAGGGAGAGGGAGUGCUUCAGGAGCAGCAAACAAGAGAAAUGGGCUUCGGAGGCCCGGGGAGGCAAGGCCAAGGCCCAGGGAACCCCCGGCUCUUACCAGGGCGCUGCCCUCCUCUGGAAGGGCGUUGGAUCCGGGGUGCGAUGGCCGAGGCAGGUGGCCUGGCUUGAACCAGCUAUGGGGGG2000000006ACUCUCAACAGUAGGUGCCUGCCCUGGAAUCCUGGGCGCCCAACAAGCCCAGGCGCAGUCGAACCUCCUGGGGAAGUGCCGCCGGCCGCGCACCGCCUUCACCAGCCAGCAGCUGCUGGAGCUGGAGCACCAGUUCAAGCUCAACAAGUACCUGUCGCGGCCCAAGCGCUUCGAGGUGGCCACCUCGCUCAUGCUCACCGAGACCCAGGUGAAGAUUUGGUUCCAGAACCGGCGGAUGAAAUGGAAACGCAGCAAAAAGGCCAAAGAGCAGGCGGCGCAGGAAGCGGAGAAACAGAAGGGCGGCGGCGGGGGCGCGGGGAAGGGCGGCGCGGAGGAGCCGGGAGCCGAGGAGCUGCUGGGGCCGCCAGCGCCCGGAGACAAGGGCAGCGGACGCCGCCUGCGGG2000000006ACUUGAGGG2000000006ACAGUGACCCCGAGGAGGACGAGGACGAGGACGACGAGGACCAUUUCCCCUACAGCAACGGCGCCAGCGUCCACGCCGCCUCCUCCGACUGCUCCUCGGAGGACGACUCGCCGCCCCCGCGGCCCAGCCACCAGCCCGCGCCCCAGUAGGAGCCCCGCGGCCCAGCAGGUGCGGCGCGCACGGAGCGCCCCGGCCGGCGGCUUCUCCCGGAGGCCCCGGCGCCCGCACCCACCCGGCCCGGCCCCGAGAGCAGGCUCGACCGCCGCCCCAUGG2000000006ACCCCUCGCCCAGGCCGGGGCUGGAGGGAUUCGGCCGCGGCUCCGGUCCUGGGCGCUUCCCUUUUAAGCAAGGGCGCCUCACCUGCUCUUCAAGAAACAGCGAGAGGGAG2000000006ACCCAGGGGGCUGAA2000000006ACUUGA2000000006ACUCUGGUUCUUUUAAAAUUAAUUUUGGUUGGUGUUGGGGGAGGCGCGAGUGCGUGUGAGAAGAACCGACCCACCCCGCGCAAGGGGAAGCCUCCUGUCUCCCCUUUCCCCGCGUCCGAGAAGGCGGAAACCCACAGUGUUACCUG2000000006ACUUAUGAAACUUGAAACCGCCUCUGGAGCCGCCAUUCUGCAGAGUAUUUGGAAAAAGAAAAAAGGGUUUAUGCUUACGUCUCUGGGGUCGGGGGGAUUAUGUCACGAGCGUUCAAACUGCUGGAAAUCUCAAAACUGUACUGUCU2000000009UUAUUUUUGUAUAUUGUAUUUAUAUAUAAAAAGAAACGUCUACGUAUGCAUGCUAAAUUAUUAUUUAGCUUCUCCCAUCGCCCACGAUGGAAUGUAAAAUAAAUUGGUUUUGUACUGGAU

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	392	796	805	1078	1188	1203	1209	1355	1501
Modification Positions	m6A	m6A	m6A	m6A	m6A	m6A	m6A	m6A	Y
Genomic Coordinates	7:157009044:-	7:157005677:-	7:157005668:-	7:157005395:-	7:157005285:-	7:157005270:-	7:157005264:-	7:157005118:-	7:157004972:-
Level of Experimental Evidence	3	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	6UuHp6YApVKv jNkxUQNx8GRd msuJfBpJvM5H VyCX26p5UBRL	6UuHp6YApVKv jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL BtsJQJ3DteUq Yfn77uLS5tv8	jNkxUQNx8GRd msuJfBpJvM5H NjZ8bGGJsNSR VL7zkHvkfkoB VyCX26p5UBRL BtsJQJ3DteUq Yfn77uLS5tv8	5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aHkqKEJkRYyb aivdrAsbdKEU Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn JkWoGWVwjNda Yfn77uLS5tv8	msuJfBpJvM5H VyCX26p5UBRL WdHxkJGRmFxn BtsJQJ3DteUq JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	4HMi5ykupT9V 5aTkEfEpX8Xm 6UuHp6YApVKv jNkxUQNx8GRd msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn BtsJQJ3DteUq JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	4HMi5ykupT9V 5aTkEfEpX8Xm 5FhTyQVy2tKW 5Nnepx5V7yHo 6UuHp6YApVKv aHkqKEJkRYyb aivdrAsbdKEU gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd KRfQJWH4K5KH Mg9GixDBFQAT msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn BtsJQJ3DteUq JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	6AyXsheySjfx 6UuHp6YApVKv aHkqKEJkRYyb aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H NjZ8bGGJsNSR Q36pf44ZRvxu QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn BtsJQJ3DteUq iezFbUdmY3A6 JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	BtsJQJ3DteUq iezFbUdmY3A6 JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8