General Data

RNA Type	lncRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000428939
Gene ID:	ENSG00000233429
Gene Name:	HOTAIRM1
Sequence (UNICHARACTER ENCODING)	UGCUAGAAAGGAAAGGAAUAAGGAGGAGAUAAAAUGACGCCGAGGCCCUGAACUGUUCAUGGCAUCCGCGGCUCAGCCAAGCUGUUGUUUUAAAAGAGCAAUAAAAAUGAAUUAUGACUAAACGCCUUCUAACUUAAUGCUUUCGGACGGGGAUCCCCGGCAAAUAACGUAAGAGGAUUUUUAUUUGUGCAUGUGUUCCUGCAAUUGAUCUCUUUGAUGACAUUCUCAUUCAUAGAAAGCGUUUGAUUUAUGAGCGUAGGACGAAUCGCAUCCAGGAGCUGCGCAGCCCUGGCCGCUGCCGGGACGCCCUGCUCCGCGCUGAGCUUGGGGCCAGAAACCAGCCAUAGUCCCCACACUCCGCCGCCGCAGCUGAGAUUUAGCGGAGGAAGGGGCGAGGGAAGGUAGGGAGCAAACCUAUGAAGAAACAUCGCGUUGUCAUUGGAACUUCCAAGCCUUUGCUGUUAAGAGCCAGGUUCUUAAAUCAACCCGCCCCACACACAUGUUGCUUACAUGCUGCGUUUUCUCACGGUCUGUUUUGCCUGAACCCAUCAACAGCUGGGAGAUUAAUCAACCACACUGAAAAUGUGGAGGGAUUUAUGGGGGAGGGGGUUGAAAUGUGGGUGUUUGAAACAAAAGUGUAUAAACAAAUGAAUUGUUGAUAЖCUUAGUUAUUGACCUGGAGACUGGUAGCUUAUUAAAGAAACUCCGUGUUACUCAUUCCUGGAGUUGGGGGUUUCUGUAGGCACUPUAUUUCUCCACUUUCAAGAGCUUGGGCUUGGCCCAAAUCUUAGЖCUGUCCAAUUCUGCCUCUAUUACCAAUUUAAAUCUAUGGCUUGAACCUGUGCACUGAAAAUCAAAUCCUPUAAAAAGAAAGAGGAGAAGAAGAAGCAA
Sequence (SHORT NAMES ENCODING)	UGCUAGAAAGGAAAGGAAUAAGGAGGAGAUAAAAUGACGCCGAGGCCCUGAACUGUUCAUGGCAUCCGCGGCUCAGCCAAGCUGUUGUUUUAAAAGAGCAAUAAAAAUGAAUUAUGACUAAACGCCUUCUAACUUAAUGCUUUCGGACGGGGAUCCCCGGCAAAUAACGUAAGAGGAUUUUUAUUUGUGCAUGUGUUCCUGCAAUUGAUCUCUUUGAUGACAUUCUCAUUCAUAGAAAGCGUUUGAUUUAUGAGCGUAGGACGAAUCGCAUCCAGGAGCUGCGCAGCCCUGGCCGCUGCCGGGACGCCCUGCUCCGCGCUGAGCUUGGGGCCAGAAACCAGCCAUAGUCCCCACACUCCGCCGCCGCAGCUGAGAUUUAGCGGAGGAAGGGGCGAGGGAAGGUAGGGAGCAAACCUAUGAAGAAACAUCGCGUUGUCAUUGGAACUUCCAAGCCUUUGCUGUUAAGAGCCAGGUUCUUAAAUCAACCCGCCCCACACACAUGUUGCUUACAUGCUGCGUUUUCUCACGGUCUGUUUUGCCUGAACCCAUCAACAGCUGGGAGAUUAAUCAACCACACUGAAAAUGUGGAGGGAUUUAUGGGGGAGGGGGUUGAAAUGUGGGUGUUUGAAACAAAAGUGUAUAAACAAAUGAAUUGUUGAUAm6ACUUAGUUAUUGACCUGGAGACUGGUAGCUUAUUAAAGAAACUCCGUGUUACUCAUUCCUGGAGUUGGGGGUUUCUGUAGGCACUYUAUUUCUCCACUUUCAAGAGCUUGGGCUUGGCCCAAAUCUUAGm6ACUGUCCAAUUCUGCCUCUAUUACCAAUUUAAAUCUAUGGCUUGAACCUGUGCACUGAAAAUCAAAUCCUYUAAAAAGAAAGAGGAGAAGAAGAAGCAA
Sequence (MODOMICS CODE ENCODING)	UGCUAGAAAGGAAAGGAAUAAGGAGGAGAUAAAAUGACGCCGAGGCCCUGAACUGUUCAUGGCAUCCGCGGCUCAGCCAAGCUGUUGUUUUAAAAGAGCAAUAAAAAUGAAUUAUGACUAAACGCCUUCUAACUUAAUGCUUUCGGACGGGGAUCCCCGGCAAAUAACGUAAGAGGAUUUUUAUUUGUGCAUGUGUUCCUGCAAUUGAUCUCUUUGAUGACAUUCUCAUUCAUAGAAAGCGUUUGAUUUAUGAGCGUAGGACGAAUCGCAUCCAGGAGCUGCGCAGCCCUGGCCGCUGCCGGGACGCCCUGCUCCGCGCUGAGCUUGGGGCCAGAAACCAGCCAUAGUCCCCACACUCCGCCGCCGCAGCUGAGAUUUAGCGGAGGAAGGGGCGAGGGAAGGUAGGGAGCAAACCUAUGAAGAAACAUCGCGUUGUCAUUGGAACUUCCAAGCCUUUGCUGUUAAGAGCCAGGUUCUUAAAUCAACCCGCCCCACACACAUGUUGCUUACAUGCUGCGUUUUCUCACGGUCUGUUUUGCCUGAACCCAUCAACAGCUGGGAGAUUAAUCAACCACACUGAAAAUGUGGAGGGAUUUAUGGGGGAGGGGGUUGAAAUGUGGGUGUUUGAAACAAAAGUGUAUAAACAAAUGAAUUGUUGAUA2000000006ACUUAGUUAUUGACCUGGAGACUGGUAGCUUAUUAAAGAAACUCCGUGUUACUCAUUCCUGGAGUUGGGGGUUUCUGUAGGCACU2000000009UUAUUUCUCCACUUUCAAGAGCUUGGGCUUGGCCCAAAUCUUAG2000000006ACUGUCCAAUUCUGCCUCUAUUACCAAUUUAAAUCUAUGGCUUGAACCUGUGCACUGAAAAUCAAAUCCU2000000009UUAAAAAGAAAGAGGAGAAGAAGAAGCAA

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	662	747	791	861
Modification Positions	m6A	Y	m6A	Y
Genomic Coordinates	7:27099912:+	7:27099997:+	7:27100041:+	7:27100111:+
Level of Experimental Evidence	3	3	3	3
Level of Experimental Reliability	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP Mk6ShCGm6RBJ oZ9Kp5NX8Hv5 iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP Mk6ShCGm6RBJ iezFbUdmY3A6 JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	3TeAZFYFxgvp 4HMi5ykupT9V 5aTkEfEpX8Xm 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn BkoLW2CBToyL BsCW7emuRX7M KENzb7mwdBd9 Lny8GcCeVGc9 LZJKems7W2wi UKen6WEino9G XUkp6ghERQML BtsJQJ3DteUq dknfVe6BK8aP iezFbUdmY3A6 JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP iezFbUdmY3A6 JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8