General Data

RNA Type	lncRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000398043
Gene ID:	ENSG00000214293
Gene Name:	APTR
Sequence (UNICHARACTER ENCODING)	UUCGGAGGUCAGAGCUCGGCGGGGUGCGGCUAGUGGCGGAGCGCGCUGCGAGGGGAGGGCUUUCCACUGUCGCUGGCGUGAACUCGCGUGCCCGGUGGGUAUCAGGGAAGAACCCCCGCCCCGGACCCCCAGAUCUGCCAUGGCCGAGGUAGCGAUCGUCUCUGCGGCCACGAAGЖCUGUUUUAACUUGUACCACUUUCCCUUCCAUUUUUCCUGGGGUGCCUCUCACCCUGCAUCUGCGCGUUCAGCAAGCUGGAUUUCGGGAAUGCUCAGUUCAGAAGAGAAAAAAUUGCCGGGAAUCAAGUCCUUCUUUUUGUUAGUCGGUAGUCGAUUGAUGGGAAGUGUUCAAAAUCAUUCGAUGUGGUGACAAGGCUUCACCAGGUACUGCCUUCUAACGAGCUGGCCAUUUCCACAUGUCAGAUAGGACCAACUUGCCUUUUAЖCUACCCGUGUGAUACUUAAACACUGUUGCCGGUAUCACAGCUUUUCUUCAAAACAGGUAAUAUUAGGGACACUUGAAAUUUGGGAAUUAGAUUUACCUUUGCUGUUACUAAAUAAUUGUUAGAAUUUUAAAUGUCAUAUUCAUUUUACUCAACUAAUCUCUUUAGCUUUCCUAUUUAUAUUCCUACUUAUGAUUACGUGUAAUUCUCAUUGGAAGGAUUAAAAUAUUUUGAAAGUAAGACAGUAAAAUUGUGAAAUACUUUGGUAUUGGUUACAAAACAGUACUUAGGUACCUUCUUCCUGAUUUUUCUGUAUUUUUAAAAAAUAAGGCCAGGCACAGUGGCAAAUGCUUAUAUUCCCAACUGCCCAGUAAGCUGAAGCAAGAGAAUUGCUUGAGCCCAACCUGGGCAACAUAGUGAAACCCCAGUCACCAAUUAAAAACAAACAAACAAAAAGAGUAUAUUUUUUGAAGAUAUUUUAUCACAUAUACAGAAGCAAACAAAGAGGGGAAGGAAUUGUUUAAAAUAAUGUUAAGCUAAAUAAAGUCAAAGAAAAUUUAAGUAAUAGUUAAUAGUUAUUGUUAUAGAAGACAUCAAUUUACUACCCCGUUCUCAAAAAGGAAAAUCUGCAAGUAGACUGUAGUGCUAGAGUAAGCUUUUCCUUAAUUUCAGAAAGCCUGUAUUAAGCAUUUACUUUAUGCCAAACUCCAUUUUAGGGACUGGAAAUAUAAAAUAAAUAAAACACAGUCCCUGCUCUCAGUGAACUUGUUGUCUAGGGAAUGUUAAGUAGAACCACCUGAAAUUGCAUUGUUUUUGUAAGCCAGCUAUCGGUUCCACCUGACAUUAUAUGUGGAAACAGAAAUUUGCAAUAAUAAAGAUAUGACCACGGUGCUACGGGGCACUGACAAAAUGCUUCAUGCUGCCCAGGGCAGUCAGUGAAGGCUCCCCAGGGGAGAUGACGUUUGAGCCGAGUUUCAGAAGAUGAUUGGAGUUUACCACGUGUUCACAGGAAGCAACGAGAAUGAGGGCAUUCCAGUAGCAGGAGACAGCAUGCAUAGAGAUGCUGAUGAAGAAAGAGCCUAGCGCACGUGGGAAACUGCAAAAGUUCAGЖCUGGUUGGAAUGCUGGAAAUGUUGUGAAUGACAGGAGAUGAGGCUGGCGAGAAAЖCAGAGGUCAGAUUGUGGAAGGCUGUCAAGCCAAAGЖCUUUGAUUUUAUUCUUGAGAUUGAUGAGAUGUGUGUAAUCCAGGAGUGUGCAAAACAAUCUGUAAGGGUUCAGAAAACAUACUGCUUCUAUAUAUAGUUACCUUUGUCUUAЖCUUGAAAAUUUCAAAUUGUGUAGGAGUUACAAUGUGUGUAAUUGUUAUUAUAGUACUGGAUCCAAAUAAUUUAUAAAUAAAUAAAUAUAGACAUAAUAUGGUGUAUUACAGGUUAAAUUGUGUACCUCAAAAAUUCAUGUUUAAGUUCUAACCCUCAUUAUCUCAAACUGUGACCUUAUUUGGAAAUACUAUCAUUGCAGAUGCAAUAGUUAAUGAGGUCAAGUUAAGAAGCAAUAGGAGGCCAGGCAUGGUGGCUCACACCUGUAAUCGCAGCACUCUGGGGAGGCCAAGGUGGGUGGAUCACCUGAAGUCAGGAGAUCAAGAGCAACCUGGGCAACAUGGUGAAACUCCGUCUCUACUAAAAAUACACAAAUUAGGCUGGGCUUGAUGUCUCACACCUGUAAUCCCAGCACUUUGGGAGGCCAAGGCGGGCGGAUCACCUGAGGUCAGGAGUUCGAGACCAGCCUGGCCAACAUAGUGAAACCCCAUCUCUACUAAAAAUACAAAAAUUAUUUUGUAUUUUGGUGGCGGACACCUGUAAGUAAUCCCAGCUACUCGGGAGGGUGAGGCAGGAGAAUCGCUUAAACCUGGGAGGUGGAGUUUGCAGUGAACCAAGAUCACACCACUGCACUCCAGCUUAGG
Sequence (SHORT NAMES ENCODING)	UUCGGAGGUCAGAGCUCGGCGGGGUGCGGCUAGUGGCGGAGCGCGCUGCGAGGGGAGGGCUUUCCACUGUCGCUGGCGUGAACUCGCGUGCCCGGUGGGUAUCAGGGAAGAACCCCCGCCCCGGACCCCCAGAUCUGCCAUGGCCGAGGUAGCGAUCGUCUCUGCGGCCACGAAGm6ACUGUUUUAACUUGUACCACUUUCCCUUCCAUUUUUCCUGGGGUGCCUCUCACCCUGCAUCUGCGCGUUCAGCAAGCUGGAUUUCGGGAAUGCUCAGUUCAGAAGAGAAAAAAUUGCCGGGAAUCAAGUCCUUCUUUUUGUUAGUCGGUAGUCGAUUGAUGGGAAGUGUUCAAAAUCAUUCGAUGUGGUGACAAGGCUUCACCAGGUACUGCCUUCUAACGAGCUGGCCAUUUCCACAUGUCAGAUAGGACCAACUUGCCUUUUAm6ACUACCCGUGUGAUACUUAAACACUGUUGCCGGUAUCACAGCUUUUCUUCAAAACAGGUAAUAUUAGGGACACUUGAAAUUUGGGAAUUAGAUUUACCUUUGCUGUUACUAAAUAAUUGUUAGAAUUUUAAAUGUCAUAUUCAUUUUACUCAACUAAUCUCUUUAGCUUUCCUAUUUAUAUUCCUACUUAUGAUUACGUGUAAUUCUCAUUGGAAGGAUUAAAAUAUUUUGAAAGUAAGACAGUAAAAUUGUGAAAUACUUUGGUAUUGGUUACAAAACAGUACUUAGGUACCUUCUUCCUGAUUUUUCUGUAUUUUUAAAAAAUAAGGCCAGGCACAGUGGCAAAUGCUUAUAUUCCCAACUGCCCAGUAAGCUGAAGCAAGAGAAUUGCUUGAGCCCAACCUGGGCAACAUAGUGAAACCCCAGUCACCAAUUAAAAACAAACAAACAAAAAGAGUAUAUUUUUUGAAGAUAUUUUAUCACAUAUACAGAAGCAAACAAAGAGGGGAAGGAAUUGUUUAAAAUAAUGUUAAGCUAAAUAAAGUCAAAGAAAAUUUAAGUAAUAGUUAAUAGUUAUUGUUAUAGAAGACAUCAAUUUACUACCCCGUUCUCAAAAAGGAAAAUCUGCAAGUAGACUGUAGUGCUAGAGUAAGCUUUUCCUUAAUUUCAGAAAGCCUGUAUUAAGCAUUUACUUUAUGCCAAACUCCAUUUUAGGGACUGGAAAUAUAAAAUAAAUAAAACACAGUCCCUGCUCUCAGUGAACUUGUUGUCUAGGGAAUGUUAAGUAGAACCACCUGAAAUUGCAUUGUUUUUGUAAGCCAGCUAUCGGUUCCACCUGACAUUAUAUGUGGAAACAGAAAUUUGCAAUAAUAAAGAUAUGACCACGGUGCUACGGGGCACUGACAAAAUGCUUCAUGCUGCCCAGGGCAGUCAGUGAAGGCUCCCCAGGGGAGAUGACGUUUGAGCCGAGUUUCAGAAGAUGAUUGGAGUUUACCACGUGUUCACAGGAAGCAACGAGAAUGAGGGCAUUCCAGUAGCAGGAGACAGCAUGCAUAGAGAUGCUGAUGAAGAAAGAGCCUAGCGCACGUGGGAAACUGCAAAAGUUCAGm6ACUGGUUGGAAUGCUGGAAAUGUUGUGAAUGACAGGAGAUGAGGCUGGCGAGAAAm6ACAGAGGUCAGAUUGUGGAAGGCUGUCAAGCCAAAGm6ACUUUGAUUUUAUUCUUGAGAUUGAUGAGAUGUGUGUAAUCCAGGAGUGUGCAAAACAAUCUGUAAGGGUUCAGAAAACAUACUGCUUCUAUAUAUAGUUACCUUUGUCUUAm6ACUUGAAAAUUUCAAAUUGUGUAGGAGUUACAAUGUGUGUAAUUGUUAUUAUAGUACUGGAUCCAAAUAAUUUAUAAAUAAAUAAAUAUAGACAUAAUAUGGUGUAUUACAGGUUAAAUUGUGUACCUCAAAAAUUCAUGUUUAAGUUCUAACCCUCAUUAUCUCAAACUGUGACCUUAUUUGGAAAUACUAUCAUUGCAGAUGCAAUAGUUAAUGAGGUCAAGUUAAGAAGCAAUAGGAGGCCAGGCAUGGUGGCUCACACCUGUAAUCGCAGCACUCUGGGGAGGCCAAGGUGGGUGGAUCACCUGAAGUCAGGAGAUCAAGAGCAACCUGGGCAACAUGGUGAAACUCCGUCUCUACUAAAAAUACACAAAUUAGGCUGGGCUUGAUGUCUCACACCUGUAAUCCCAGCACUUUGGGAGGCCAAGGCGGGCGGAUCACCUGAGGUCAGGAGUUCGAGACCAGCCUGGCCAACAUAGUGAAACCCCAUCUCUACUAAAAAUACAAAAAUUAUUUUGUAUUUUGGUGGCGGACACCUGUAAGUAAUCCCAGCUACUCGGGAGGGUGAGGCAGGAGAAUCGCUUAAACCUGGGAGGUGGAGUUUGCAGUGAACCAAGAUCACACCACUGCACUCCAGCUUAGG
Sequence (MODOMICS CODE ENCODING)	UUCGGAGGUCAGAGCUCGGCGGGGUGCGGCUAGUGGCGGAGCGCGCUGCGAGGGGAGGGCUUUCCACUGUCGCUGGCGUGAACUCGCGUGCCCGGUGGGUAUCAGGGAAGAACCCCCGCCCCGGACCCCCAGAUCUGCCAUGGCCGAGGUAGCGAUCGUCUCUGCGGCCACGAAG2000000006ACUGUUUUAACUUGUACCACUUUCCCUUCCAUUUUUCCUGGGGUGCCUCUCACCCUGCAUCUGCGCGUUCAGCAAGCUGGAUUUCGGGAAUGCUCAGUUCAGAAGAGAAAAAAUUGCCGGGAAUCAAGUCCUUCUUUUUGUUAGUCGGUAGUCGAUUGAUGGGAAGUGUUCAAAAUCAUUCGAUGUGGUGACAAGGCUUCACCAGGUACUGCCUUCUAACGAGCUGGCCAUUUCCACAUGUCAGAUAGGACCAACUUGCCUUUUA2000000006ACUACCCGUGUGAUACUUAAACACUGUUGCCGGUAUCACAGCUUUUCUUCAAAACAGGUAAUAUUAGGGACACUUGAAAUUUGGGAAUUAGAUUUACCUUUGCUGUUACUAAAUAAUUGUUAGAAUUUUAAAUGUCAUAUUCAUUUUACUCAACUAAUCUCUUUAGCUUUCCUAUUUAUAUUCCUACUUAUGAUUACGUGUAAUUCUCAUUGGAAGGAUUAAAAUAUUUUGAAAGUAAGACAGUAAAAUUGUGAAAUACUUUGGUAUUGGUUACAAAACAGUACUUAGGUACCUUCUUCCUGAUUUUUCUGUAUUUUUAAAAAAUAAGGCCAGGCACAGUGGCAAAUGCUUAUAUUCCCAACUGCCCAGUAAGCUGAAGCAAGAGAAUUGCUUGAGCCCAACCUGGGCAACAUAGUGAAACCCCAGUCACCAAUUAAAAACAAACAAACAAAAAGAGUAUAUUUUUUGAAGAUAUUUUAUCACAUAUACAGAAGCAAACAAAGAGGGGAAGGAAUUGUUUAAAAUAAUGUUAAGCUAAAUAAAGUCAAAGAAAAUUUAAGUAAUAGUUAAUAGUUAUUGUUAUAGAAGACAUCAAUUUACUACCCCGUUCUCAAAAAGGAAAAUCUGCAAGUAGACUGUAGUGCUAGAGUAAGCUUUUCCUUAAUUUCAGAAAGCCUGUAUUAAGCAUUUACUUUAUGCCAAACUCCAUUUUAGGGACUGGAAAUAUAAAAUAAAUAAAACACAGUCCCUGCUCUCAGUGAACUUGUUGUCUAGGGAAUGUUAAGUAGAACCACCUGAAAUUGCAUUGUUUUUGUAAGCCAGCUAUCGGUUCCACCUGACAUUAUAUGUGGAAACAGAAAUUUGCAAUAAUAAAGAUAUGACCACGGUGCUACGGGGCACUGACAAAAUGCUUCAUGCUGCCCAGGGCAGUCAGUGAAGGCUCCCCAGGGGAGAUGACGUUUGAGCCGAGUUUCAGAAGAUGAUUGGAGUUUACCACGUGUUCACAGGAAGCAACGAGAAUGAGGGCAUUCCAGUAGCAGGAGACAGCAUGCAUAGAGAUGCUGAUGAAGAAAGAGCCUAGCGCACGUGGGAAACUGCAAAAGUUCAG2000000006ACUGGUUGGAAUGCUGGAAAUGUUGUGAAUGACAGGAGAUGAGGCUGGCGAGAAA2000000006ACAGAGGUCAGAUUGUGGAAGGCUGUCAAGCCAAAG2000000006ACUUUGAUUUUAUUCUUGAGAUUGAUGAGAUGUGUGUAAUCCAGGAGUGUGCAAAACAAUCUGUAAGGGUUCAGAAAACAUACUGCUUCUAUAUAUAGUUACCUUUGUCUUA2000000006ACUUGAAAAUUUCAAAUUGUGUAGGAGUUACAAUGUGUGUAAUUGUUAUUAUAGUACUGGAUCCAAAUAAUUUAUAAAUAAAUAAAUAUAGACAUAAUAUGGUGUAUUACAGGUUAAAUUGUGUACCUCAAAAAUUCAUGUUUAAGUUCUAACCCUCAUUAUCUCAAACUGUGACCUUAUUUGGAAAUACUAUCAUUGCAGAUGCAAUAGUUAAUGAGGUCAAGUUAAGAAGCAAUAGGAGGCCAGGCAUGGUGGCUCACACCUGUAAUCGCAGCACUCUGGGGAGGCCAAGGUGGGUGGAUCACCUGAAGUCAGGAGAUCAAGAGCAACCUGGGCAACAUGGUGAAACUCCGUCUCUACUAAAAAUACACAAAUUAGGCUGGGCUUGAUGUCUCACACCUGUAAUCCCAGCACUUUGGGAGGCCAAGGCGGGCGGAUCACCUGAGGUCAGGAGUUCGAGACCAGCCUGGCCAACAUAGUGAAACCCCAUCUCUACUAAAAAUACAAAAAUUAUUUUGUAUUUUGGUGGCGGACACCUGUAAGUAAUCCCAGCUACUCGGGAGGGUGAGGCAGGAGAAUCGCUUAAACCUGGGAGGUGGAGUUUGCAGUGAACCAAGAUCACACCACUGCACUCCAGCUUAGG

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	176	441	1549	1604	1640	1752
Modification Positions	m6A	m6A	m6A	m6A	m6A	m6A
Genomic Coordinates	7:77696090:-	7:77685258:-	7:77684150:-	7:77684095:-	7:77684059:-	7:77683947:-
Level of Experimental Evidence	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	3TeAZFYFxgvp 4HMi5ykupT9V 5aTkEfEpX8Xm 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H NjZ8bGGJsNSR QmcpiJ88DBDn QpiKdbVikVz2 VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn BkoLW2CBToyL Lny8GcCeVGc9 BtsJQJ3DteUq dknfVe6BK8aP Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP JkWoGWVwjNda Yfn77uLS5tv8	4HMi5ykupT9V gZuvgwMuBfgh msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn BtsJQJ3DteUq dknfVe6BK8aP Mk6ShCGm6RBJ oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP oZ9Kp5NX8Hv5 JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	4HMi5ykupT9V msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL Lny8GcCeVGc9 UKen6WEino9G BtsJQJ3DteUq dknfVe6BK8aP Mk6ShCGm6RBJ oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8