General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000437355
Gene ID:	ENSG00000146733
Gene Name:	PSPH
Sequence (UNICHARACTER ENCODING)	UUUCAUUGGAGCUUCCCGGACCGUGUGCUCGACGGUGCCCUAGGUGCCGUGGGGCCACACGCGAGUCUGAUAAGCACCCUCCCCCGGAAUCAUGCGGUGCUGUGAGGCCUAGCGAAGAUGAAGAUAGAAUGCAAGGUAGAAAGUGCUGGAUACCUUUAGAAAGCUGCAGGЖCUGGUGCGAUGGGAGUUGAGACGUAAGAACCUGCCCGUCCGUAGGGCUCUGGAUGCUGCUGAGGCCCGAGGCCCCUAUGGCAGAUUUGAAAAUUCACCCUUGUAGAGUCAUUCCUGCCUUUGAGCGGACUCCCUUUUЖAGGAGGAAAAUUCUUCCAGCGAUGGUCUCCCACUCAGAGCUGAGGAAGCUUUUCUACUCAGCAGAUGCUGUGUGUUUUGAUGUUGACAGCACGGUCAUCAGAGAAGAAGGAAUCGAUGAGCUAGCCAAAAUCUGUGGCGUUGAGGACGCGGUGUCAGAAAUGACACGGCGAGCCAUGGGCGGGGCAGUGCCUUUCAAAGCUGCUCUCACAGAGCGCUUAGCCCUCAPCCAGCCCUCCAGGGAGCAGGUGCAGAGACUCAUAGCAGAGCAACCCCCACACCUGACCCCCGGCAUAAGGGAGCUGGUAAGUCGCCUACAGGAGCGAAAUGUUCAGGUUUUCCUAAUAUCUGGUGGCUPUAGGAGUAUUGUAGAGCAUGUUGCUUCAAAGCUCAAUAUCCCAGCAACCAAUGUAUUUGCCAAUAGGCUGAAAUUCUACUPUAACGGUGAAUAUGCAGGUUUUGAUGAGACGCAGCCAACAGCUGAAUCUGGUGGAAAAGGAAAAGUGAUUAAACUUUUAAAGGAAAAAUUUCAUUUUAAGAAAAUAAUCAUGAUUGGAGAUGGUGCCACAGAUAUGGAAGCCUGUCCUCCUGCUGAUGCUUUCAUUGGAUUUGGAGGAAAUGUGAUCAGGCAACAAGUCAAGGAUAACGCCAAAUGGUAUAUCACUGAUUUUGUAGAGCUGCUGGGAGAACUGGAAGAAUAЖCAPCCAUUGUCGUACAGCUCCAAACAACUUCAGAUGAAUUUUUACЖAGUUAUACAGAUUGAUACUGUUUGCUUACAGUUGCCUAUUACAACUUGCUAUAGAAAGUUGGUACAAAUGAUCUGUACUPUAAACUACAGUUAGGAAUCCUAGAAGAUUGCUUUUUUUUUUUUUUUAACUGUAGUUCCAGUAUUAUAUGAUGACUAUUGAUUUCCUGGAGAGUUUUGUGAUCUGAAUUCUPUAUGUAUAUUUGUAGCUAUAUUUCAUACAAAGUGCUPUAAGUGUGGAGAGUCAAUUAAACACCUPUACUCUUAGAAAUACGGAUUCGGCAGCCUUCAGUGAAUAUUGGUUUCUCUUUGGUAUGUCAAUAAAAGUUUAUCCGUAUGUCAGAACGGAUUUGUGGAA
Sequence (SHORT NAMES ENCODING)	UUUCAUUGGAGCUUCCCGGACCGUGUGCUCGACGGUGCCCUAGGUGCCGUGGGGCCACACGCGAGUCUGAUAAGCACCCUCCCCCGGAAUCAUGCGGUGCUGUGAGGCCUAGCGAAGAUGAAGAUAGAAUGCAAGGUAGAAAGUGCUGGAUACCUUUAGAAAGCUGCAGGm6ACUGGUGCGAUGGGAGUUGAGACGUAAGAACCUGCCCGUCCGUAGGGCUCUGGAUGCUGCUGAGGCCCGAGGCCCCUAUGGCAGAUUUGAAAAUUCACCCUUGUAGAGUCAUUCCUGCCUUUGAGCGGACUCCCUUUUm6AAGGAGGAAAAUUCUUCCAGCGAUGGUCUCCCACUCAGAGCUGAGGAAGCUUUUCUACUCAGCAGAUGCUGUGUGUUUUGAUGUUGACAGCACGGUCAUCAGAGAAGAAGGAAUCGAUGAGCUAGCCAAAAUCUGUGGCGUUGAGGACGCGGUGUCAGAAAUGACACGGCGAGCCAUGGGCGGGGCAGUGCCUUUCAAAGCUGCUCUCACAGAGCGCUUAGCCCUCAYCCAGCCCUCCAGGGAGCAGGUGCAGAGACUCAUAGCAGAGCAACCCCCACACCUGACCCCCGGCAUAAGGGAGCUGGUAAGUCGCCUACAGGAGCGAAAUGUUCAGGUUUUCCUAAUAUCUGGUGGCUYUAGGAGUAUUGUAGAGCAUGUUGCUUCAAAGCUCAAUAUCCCAGCAACCAAUGUAUUUGCCAAUAGGCUGAAAUUCUACUYUAACGGUGAAUAUGCAGGUUUUGAUGAGACGCAGCCAACAGCUGAAUCUGGUGGAAAAGGAAAAGUGAUUAAACUUUUAAAGGAAAAAUUUCAUUUUAAGAAAAUAAUCAUGAUUGGAGAUGGUGCCACAGAUAUGGAAGCCUGUCCUCCUGCUGAUGCUUUCAUUGGAUUUGGAGGAAAUGUGAUCAGGCAACAAGUCAAGGAUAACGCCAAAUGGUAUAUCACUGAUUUUGUAGAGCUGCUGGGAGAACUGGAAGAAUAm6ACAYCCAUUGUCGUACAGCUCCAAACAACUUCAGAUGAAUUUUUACm6AAGUUAUACAGAUUGAUACUGUUUGCUUACAGUUGCCUAUUACAACUUGCUAUAGAAAGUUGGUACAAAUGAUCUGUACUYUAAACUACAGUUAGGAAUCCUAGAAGAUUGCUUUUUUUUUUUUUUUAACUGUAGUUCCAGUAUUAUAUGAUGACUAUUGAUUUCCUGGAGAGUUUUGUGAUCUGAAUUCUYUAUGUAUAUUUGUAGCUAUAUUUCAUACAAAGUGCUYUAAGUGUGGAGAGUCAAUUAAACACCUYUACUCUUAGAAAUACGGAUUCGGCAGCCUUCAGUGAAUAUUGGUUUCUCUUUGGUAUGUCAAUAAAAGUUUAUCCGUAUGUCAGAACGGAUUUGUGGAA
Sequence (MODOMICS CODE ENCODING)	UUUCAUUGGAGCUUCCCGGACCGUGUGCUCGACGGUGCCCUAGGUGCCGUGGGGCCACACGCGAGUCUGAUAAGCACCCUCCCCCGGAAUCAUGCGGUGCUGUGAGGCCUAGCGAAGAUGAAGAUAGAAUGCAAGGUAGAAAGUGCUGGAUACCUUUAGAAAGCUGCAGG2000000006ACUGGUGCGAUGGGAGUUGAGACGUAAGAACCUGCCCGUCCGUAGGGCUCUGGAUGCUGCUGAGGCCCGAGGCCCCUAUGGCAGAUUUGAAAAUUCACCCUUGUAGAGUCAUUCCUGCCUUUGAGCGGACUCCCUUUU2000000006AAGGAGGAAAAUUCUUCCAGCGAUGGUCUCCCACUCAGAGCUGAGGAAGCUUUUCUACUCAGCAGAUGCUGUGUGUUUUGAUGUUGACAGCACGGUCAUCAGAGAAGAAGGAAUCGAUGAGCUAGCCAAAAUCUGUGGCGUUGAGGACGCGGUGUCAGAAAUGACACGGCGAGCCAUGGGCGGGGCAGUGCCUUUCAAAGCUGCUCUCACAGAGCGCUUAGCCCUCA2000000009UCCAGCCCUCCAGGGAGCAGGUGCAGAGACUCAUAGCAGAGCAACCCCCACACCUGACCCCCGGCAUAAGGGAGCUGGUAAGUCGCCUACAGGAGCGAAAUGUUCAGGUUUUCCUAAUAUCUGGUGGCU2000000009UUAGGAGUAUUGUAGAGCAUGUUGCUUCAAAGCUCAAUAUCCCAGCAACCAAUGUAUUUGCCAAUAGGCUGAAAUUCUACU2000000009UUAACGGUGAAUAUGCAGGUUUUGAUGAGACGCAGCCAACAGCUGAAUCUGGUGGAAAAGGAAAAGUGAUUAAACUUUUAAAGGAAAAAUUUCAUUUUAAGAAAAUAAUCAUGAUUGGAGAUGGUGCCACAGAUAUGGAAGCCUGUCCUCCUGCUGAUGCUUUCAUUGGAUUUGGAGGAAAUGUGAUCAGGCAACAAGUCAAGGAUAACGCCAAAUGGUAUAUCACUGAUUUUGUAGAGCUGCUGGGAGAACUGGAAGAAUA2000000006ACA2000000009UCCAUUGUCGUACAGCUCCAAACAACUUCAGAUGAAUUUUUAC2000000006AAGUUAUACAGAUUGAUACUGUUUGCUUACAGUUGCCUAUUACAACUUGCUAUAGAAAGUUGGUACAAAUGAUCUGUACU2000000009UUAAACUACAGUUAGGAAUCCUAGAAGAUUGCUUUUUUUUUUUUUUUAACUGUAGUUCCAGUAUUAUAUGAUGACUAUUGAUUUCCUGGAGAGUUUUGUGAUCUGAAUUCU2000000009UUAUGUAUAUUUGUAGCUAUAUUUCAUACAAAGUGCU2000000009UUAAGUGUGGAGAGUCAAUUAAACACCU2000000009UUACUCUUAGAAAUACGGAUUCGGCAGCCUUCAGUGAAUAUUGGUUUCUCUUUGGUAUGUCAAUAAAAGUUUAUCCGUAUGUCAGAACGGAUUUGUGGAA

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	171	309	536	665	746	1008	1011	1054	1134	1245	1282	1310
Modification Positions	m6A	m6A	Y	Y	Y	m6A	Y	m6A	Y	Y	Y	Y
Genomic Coordinates	7:56051278:-	7:56051140:-	7:56019669:-	7:56017320:-	7:56017239:-	7:56011762:-	7:56011759:-	7:56011716:-	7:56011636:-	7:56011215:-	7:56011178:-	7:56011150:-
Level of Experimental Evidence	3	3	3	3	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	6UuHp6YApVKv jNkxUQNx8GRd msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn Lny8GcCeVGc9	aJksAshEgQ8U D6ncpa2PPWj3	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr JkWoGWVwjNda Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr JkWoGWVwjNda Yfn77uLS5tv8	3kRDPWwiRCgi L6w2k2VEv4EY	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr kx7BHU7ZycYE JkWoGWVwjNda Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr kx7BHU7ZycYE JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr kx7BHU7ZycYE JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP kx7BHU7ZycYE JkWoGWVwjNda Yfn77uLS5tv8