General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000442217
Gene ID:	ENSG00000136710
Gene Name:	CCDC115
Sequence (UNICHARACTER ENCODING)	ACUUGGGGGCUAAUUGGAGAAACCAGUUGAUUGGUUGCUUCCGUGCUGCUUCUCUAAGGGCGCUUGCCCUUAAAGAAGCUGACCCAGAGGCCUUGGUGCUGCCGGCGUGGGGAUCCCCAGAUGGGAACGCCCCUUGAUGGAGGAUCUCGUGUGCCUAUUGGCUGUCCUGCCAAACUGCGGAGGGUGACAAGGAAGAAGGUGGCUCCAGAUCUGGAGGUGUGUCCAUGGCGGCGCUUGACCUGCGAGCGGAGCUGGAUUCGCUGGUCCUGCAGCUGCUUGGGGACCUGGAGGAGCUGGAGGGGAAACGAACGGUGUUGAACGCCCGGGUGGAGGAGGGCUGGCUCUCGCUCGCCAAGGCUCGCUACGCGAUGGGCGCCAAGUCGGUAGGGCCCCUGCAGUAUGCUUCCCACAUGGAGCCCCAGGUCUGCCUCCACGCCAGCGAGGCCCAGGAGGGACUCCAGAAGUUCAAGGUGGUGAGAGCUGGUGUCCACGCCCCAGAGGAGGUGGGGCCUCGCGAAGCAGGUCUGCGGAGGCGCAAGGGCCCCACUAAGACCCCAGAACCGGAGUCCUCUGAGGCCCCUCAGGACCCCCUGAACUGGUUUGGAAUCCUAGUUCCUCACAGUCUACGUCAGGCUCAAGCAAGCUUCCGGGAUGGUGUCCUGGAGGCCAAGAAGAGAAAGUGUUUCCUGGAGCGAGUGAUCCAAUGUGUGGUCAGCCCUGCUGCUGAACAGGAGGCCGAAGACGAGAGCUGCCCGGAGGACUGGGCAGCAGCUGUUCCAGCAGAGACAUCAGCAAAAGCCAUCUAGAGGUGGAUCCAGAGUGUGGACUAACAGAGAAAAGAAGUGGAGGGAGAGCAGGCCUGCAGCUGGCCGCAGACAUAGCCAGCCUCCAGAЖCCGCAUUGACUGGGGUCGAAGCCAGCUCCGGGGACUCCAAGAGAAACUCAAGCAGCUGGAGCCUGGGGCUGCCUGACAUGCGCGCAAAGAGGCAGGGCAGCGAGCACAGCUGUUCUCCGACAUGGCUACGUGAUCUCAGGCCUUCUUCCUUCACAAUUAGCUCUUGCCCCUACCCCACGCCAGCUAAUGCCCCUUCUGUGUCCCUGCUCUGCAUGUUUCCAUUUUCCUUAGGUGUGAAGUUUGAAGAGGCAAЖCAGUAAUUUUGAAAGCCACUACUUUGAAACCAUUCUAAGGCCUGAGUUCCCAUAGGACACACUCACAUAGGCAGGUACACGUUAGUCAACAAUUGGAACUGCCUCUUGGAUCACUCAGCUGUGCUUUCAUGGCUGGAUGAUGGAACACUGUGCGAAGAGAGAUGGGGGCCAGGAAGUAGCGCUUCAUGCUUAGUACAPCCUCCAAAUUGUCUUUGCUGGAGGAGAAAACCGUACUCAGCCAAAAGAUCAGGACAAUAUGACUUGAGUCCACAAGGACACAAACACCUGAGUAGCUGGGCAGCCCUUGGCAGGGUCUAAGCCAGGAAGUAAAAAUGAUCUGGCCUAGAUAUUUAAGGGAACUCUAGGAAGAGGCCUAGGUUUUUAAAAUCCUGUCUCUUUGUCUUACCAUAAGAGGCUGAGCCUCUCUUCAUUUUUUUGAAGGGCCACUUGUGUUUUCUGUUCUGGGAACUUCAUUCAUUUUUCUACUGGGUUGUUGAUCUUUGCAGUAAUUUCUAGGAGCUGUUUAUGUUUGGAGGUAAUUGGUCCUUUGUCCAUAUAUAUGAGAUGUAAGUCUUAUUUUCCAGUUUAUCUUUUUGCUUAUUUUUUUUGACUUUUUAUUGUAAAAUAAAACAUCAAACUGCACAGAЖCAGUUGAAUAGCUUAAUGAAUAЖCUACAGUAAAAGCUAUGGUAACCACUACCC
Sequence (SHORT NAMES ENCODING)	ACUUGGGGGCUAAUUGGAGAAACCAGUUGAUUGGUUGCUUCCGUGCUGCUUCUCUAAGGGCGCUUGCCCUUAAAGAAGCUGACCCAGAGGCCUUGGUGCUGCCGGCGUGGGGAUCCCCAGAUGGGAACGCCCCUUGAUGGAGGAUCUCGUGUGCCUAUUGGCUGUCCUGCCAAACUGCGGAGGGUGACAAGGAAGAAGGUGGCUCCAGAUCUGGAGGUGUGUCCAUGGCGGCGCUUGACCUGCGAGCGGAGCUGGAUUCGCUGGUCCUGCAGCUGCUUGGGGACCUGGAGGAGCUGGAGGGGAAACGAACGGUGUUGAACGCCCGGGUGGAGGAGGGCUGGCUCUCGCUCGCCAAGGCUCGCUACGCGAUGGGCGCCAAGUCGGUAGGGCCCCUGCAGUAUGCUUCCCACAUGGAGCCCCAGGUCUGCCUCCACGCCAGCGAGGCCCAGGAGGGACUCCAGAAGUUCAAGGUGGUGAGAGCUGGUGUCCACGCCCCAGAGGAGGUGGGGCCUCGCGAAGCAGGUCUGCGGAGGCGCAAGGGCCCCACUAAGACCCCAGAACCGGAGUCCUCUGAGGCCCCUCAGGACCCCCUGAACUGGUUUGGAAUCCUAGUUCCUCACAGUCUACGUCAGGCUCAAGCAAGCUUCCGGGAUGGUGUCCUGGAGGCCAAGAAGAGAAAGUGUUUCCUGGAGCGAGUGAUCCAAUGUGUGGUCAGCCCUGCUGCUGAACAGGAGGCCGAAGACGAGAGCUGCCCGGAGGACUGGGCAGCAGCUGUUCCAGCAGAGACAUCAGCAAAAGCCAUCUAGAGGUGGAUCCAGAGUGUGGACUAACAGAGAAAAGAAGUGGAGGGAGAGCAGGCCUGCAGCUGGCCGCAGACAUAGCCAGCCUCCAGAm6ACCGCAUUGACUGGGGUCGAAGCCAGCUCCGGGGACUCCAAGAGAAACUCAAGCAGCUGGAGCCUGGGGCUGCCUGACAUGCGCGCAAAGAGGCAGGGCAGCGAGCACAGCUGUUCUCCGACAUGGCUACGUGAUCUCAGGCCUUCUUCCUUCACAAUUAGCUCUUGCCCCUACCCCACGCCAGCUAAUGCCCCUUCUGUGUCCCUGCUCUGCAUGUUUCCAUUUUCCUUAGGUGUGAAGUUUGAAGAGGCAAm6ACAGUAAUUUUGAAAGCCACUACUUUGAAACCAUUCUAAGGCCUGAGUUCCCAUAGGACACACUCACAUAGGCAGGUACACGUUAGUCAACAAUUGGAACUGCCUCUUGGAUCACUCAGCUGUGCUUUCAUGGCUGGAUGAUGGAACACUGUGCGAAGAGAGAUGGGGGCCAGGAAGUAGCGCUUCAUGCUUAGUACAYCCUCCAAAUUGUCUUUGCUGGAGGAGAAAACCGUACUCAGCCAAAAGAUCAGGACAAUAUGACUUGAGUCCACAAGGACACAAACACCUGAGUAGCUGGGCAGCCCUUGGCAGGGUCUAAGCCAGGAAGUAAAAAUGAUCUGGCCUAGAUAUUUAAGGGAACUCUAGGAAGAGGCCUAGGUUUUUAAAAUCCUGUCUCUUUGUCUUACCAUAAGAGGCUGAGCCUCUCUUCAUUUUUUUGAAGGGCCACUUGUGUUUUCUGUUCUGGGAACUUCAUUCAUUUUUCUACUGGGUUGUUGAUCUUUGCAGUAAUUUCUAGGAGCUGUUUAUGUUUGGAGGUAAUUGGUCCUUUGUCCAUAUAUAUGAGAUGUAAGUCUUAUUUUCCAGUUUAUCUUUUUGCUUAUUUUUUUUGACUUUUUAUUGUAAAAUAAAACAUCAAACUGCACAGAm6ACAGUUGAAUAGCUUAAUGAAUAm6ACUACAGUAAAAGCUAUGGUAACCACUACCC
Sequence (MODOMICS CODE ENCODING)	ACUUGGGGGCUAAUUGGAGAAACCAGUUGAUUGGUUGCUUCCGUGCUGCUUCUCUAAGGGCGCUUGCCCUUAAAGAAGCUGACCCAGAGGCCUUGGUGCUGCCGGCGUGGGGAUCCCCAGAUGGGAACGCCCCUUGAUGGAGGAUCUCGUGUGCCUAUUGGCUGUCCUGCCAAACUGCGGAGGGUGACAAGGAAGAAGGUGGCUCCAGAUCUGGAGGUGUGUCCAUGGCGGCGCUUGACCUGCGAGCGGAGCUGGAUUCGCUGGUCCUGCAGCUGCUUGGGGACCUGGAGGAGCUGGAGGGGAAACGAACGGUGUUGAACGCCCGGGUGGAGGAGGGCUGGCUCUCGCUCGCCAAGGCUCGCUACGCGAUGGGCGCCAAGUCGGUAGGGCCCCUGCAGUAUGCUUCCCACAUGGAGCCCCAGGUCUGCCUCCACGCCAGCGAGGCCCAGGAGGGACUCCAGAAGUUCAAGGUGGUGAGAGCUGGUGUCCACGCCCCAGAGGAGGUGGGGCCUCGCGAAGCAGGUCUGCGGAGGCGCAAGGGCCCCACUAAGACCCCAGAACCGGAGUCCUCUGAGGCCCCUCAGGACCCCCUGAACUGGUUUGGAAUCCUAGUUCCUCACAGUCUACGUCAGGCUCAAGCAAGCUUCCGGGAUGGUGUCCUGGAGGCCAAGAAGAGAAAGUGUUUCCUGGAGCGAGUGAUCCAAUGUGUGGUCAGCCCUGCUGCUGAACAGGAGGCCGAAGACGAGAGCUGCCCGGAGGACUGGGCAGCAGCUGUUCCAGCAGAGACAUCAGCAAAAGCCAUCUAGAGGUGGAUCCAGAGUGUGGACUAACAGAGAAAAGAAGUGGAGGGAGAGCAGGCCUGCAGCUGGCCGCAGACAUAGCCAGCCUCCAGA2000000006ACCGCAUUGACUGGGGUCGAAGCCAGCUCCGGGGACUCCAAGAGAAACUCAAGCAGCUGGAGCCUGGGGCUGCCUGACAUGCGCGCAAAGAGGCAGGGCAGCGAGCACAGCUGUUCUCCGACAUGGCUACGUGAUCUCAGGCCUUCUUCCUUCACAAUUAGCUCUUGCCCCUACCCCACGCCAGCUAAUGCCCCUUCUGUGUCCCUGCUCUGCAUGUUUCCAUUUUCCUUAGGUGUGAAGUUUGAAGAGGCAA2000000006ACAGUAAUUUUGAAAGCCACUACUUUGAAACCAUUCUAAGGCCUGAGUUCCCAUAGGACACACUCACAUAGGCAGGUACACGUUAGUCAACAAUUGGAACUGCCUCUUGGAUCACUCAGCUGUGCUUUCAUGGCUGGAUGAUGGAACACUGUGCGAAGAGAGAUGGGGGCCAGGAAGUAGCGCUUCAUGCUUAGUACA2000000009UCCUCCAAAUUGUCUUUGCUGGAGGAGAAAACCGUACUCAGCCAAAAGAUCAGGACAAUAUGACUUGAGUCCACAAGGACACAAACACCUGAGUAGCUGGGCAGCCCUUGGCAGGGUCUAAGCCAGGAAGUAAAAAUGAUCUGGCCUAGAUAUUUAAGGGAACUCUAGGAAGAGGCCUAGGUUUUUAAAAUCCUGUCUCUUUGUCUUACCAUAAGAGGCUGAGCCUCUCUUCAUUUUUUUGAAGGGCCACUUGUGUUUUCUGUUCUGGGAACUUCAUUCAUUUUUCUACUGGGUUGUUGAUCUUUGCAGUAAUUUCUAGGAGCUGUUUAUGUUUGGAGGUAAUUGGUCCUUUGUCCAUAUAUAUGAGAUGUAAGUCUUAUUUUCCAGUUUAUCUUUUUGCUUAUUUUUUUUGACUUUUUAUUGUAAAAUAAAACAUCAAACUGCACAGA2000000006ACAGUUGAAUAGCUUAAUGAAUA2000000006ACUACAGUAAAAGCUAUGGUAACCACUACCC

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	894	1147	1345	1794	1817
Modification Positions	m6A	m6A	Y	m6A	m6A
Genomic Coordinates	2:130339196:-	2:130338943:-	2:130338745:-	2:130338296:-	2:130338273:-
Level of Experimental Evidence	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	BtsJQJ3DteUq bXBqJigD9oV3 Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP JkWoGWVwjNda Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP iezFbUdmY3A6 JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP iezFbUdmY3A6 JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8