General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000409422
Gene ID:	ENSG00000198925
Gene Name:	ATG9A
Sequence (UNICHARACTER ENCODING)	AGACACCCGGCCUAGCGCCGCGGGUCGCGCCGAGCCGAGCCGAGCCGAGCGGAGCCGGCGGAGCCUCUGGAAUCACCCGGGUCGCUGUUCCUGAGCACCUUGGCACCAUAUUGAAAACCUUGACCUCUUCUUCUCUCGAGUUUAUAAUCUGCACCAGAAGAAUGGCUUCACAUGUAUGCUCAUCGGGGAGAUCUUUGAGCUCAUGCAGUUCCUCUUUGUGGUUGCCUUCACUACCUUCCUGGUCAGCUGCGUGGACUAUGACAPCCUAUUUGCCAACAAGAUGGUGAACCACAGUCUUCACCCUACUGAACCCGUCAAGGUCACUCUGCCAGACGCCUUUUUGCCUGCUCAAGUCUGUAGUGCCAGGAUUCAGGAAAAUGGCUCCCUUAUCACCAUCCUGGUCAUUGCUGGUGUCUUCUGGAUCCACCGGCUUAUCAAGUUCAUCUAUAACAUUUGCUGCUACUGGGAGAUCCACUCCUUCUACCUGCACGCUCUGCGCAUCCCUAUGUCUGCCCUUCCGUAUUGCACGUGGCAAGAAGUGCAGGCCCGGAUCGUGCAGACGCAGAAGGAGCACCAGAUCUGCAPCCACAAACGUGAGCUGACAGAACUGGACAUCUACCACCGCAPCCPCCGUUUCCAGAACUACAUGGUGGCACUGGUUAACAAAUCCCUCCUGCCUCUGCGCUUCCGCCUGCCUGGCCUCGGGGAAGCUGUCUUCUUCACCCGUGGUCUCAAGUACAACUUUGAGCUGAUCCUCUUCUGGGGACCUGGCUCUCUGUUUCUCAAUGAAUGGAGCCUCAAGGCCGAGUACAAACGUGGGGGGCAACGGCUAGAGCUGGCCCAGCGCCUCAGCAACCGCAUCCUGUGGAUUGGCAUCGCUAЖCUUCCUGCUGUGCCCCCUCAPCCUCAUAUGGCAAAUCCUCUAUGCCUUCUUCAGCUAUGCUGAGGUGCUGAAGCGGGAGCCGGGGGCCCUGGGAGCACGCUGCUGGUCACUCUAUGGCCGCUGCUACCUCCGCCACUUCAACGAGCUGGAGCACGAGCUGCAGUCCCGCCUCAACCGUGGCUACAAGCCCGCCUCCAAGUACAUGAAUUGCUUCUUGUCACCUCUUUUGACACUGCUGGCCAAGAAUGGAGCCUUCUUCGCUGGCUCCAPCCUGGCUGUGCUUAUUGCCCUCACCAUUUAUGACGAAGAUGUGUUGGCUGUGGAACAUGUGCUGACCACCGUCACACUCCUGGGGGUCACCGUGACCGUGUGCAGGUCCUPUAUCCCGGACCAGCACAUGGUGUUCUGCCCUGAGCAGCUGCUCCGCGUGAUCCUCGCUCACAPCCACUACAUGCCUGACCACUGGCAGGGUAAUGCCCACCGCUCGCAGACCCGGGACGAGUUUGCCCAGCUCUUCCAGUACAAGGCAGUGUUCAUUUUGGAAGAGUUGCUGAGCCCCAUUGUCACACCCCUCAPCCUCAUCUUCUGCCUGCGCCCACGGGCCCUGGAGAUUAUAGACUUCUUCCGAAACUUCACCGUGGAGGUCGUUGGUGUGGGAGAUACCUGCUCCUUUGCUCAGAUGGAUGUUCGCCAGCAUGGUCAUCCCCAGUGGCUAUCUGCUGGGCAGACAGAGGCCUCAGUGUACCAGCAAGCUGAGGAUGGAAAGACAGAGUUGUCACUCAUGCACUUUGCCAUCACCAACCCUGGCUGGCAGCCACCACGUGAGAGCACAGCCUUCCUAGGCUUCCUCAAGGAGCAGGUUCAGCGGGAUGGAGCAGCUGCUAGCCUCGCCCAAGGGGGUCUGCUCCCUGAAAAUGCCCUCUPUACGUCUAUCCAGUCCUUACAAUCUGAGUCUGAGCCCCUGAGCCUUAUCGCAAAUGUGGUAGCUGGCUCAPCCUGCCGGGGCCCUCCACUGCCCAGAGACCUGCAGGGCUCCAGGCACAGGGCUGAAGUCGCCUCUGCCCUGCGCUCCUUCUCCCCGCUGCAACCCGGGCAGGCGCCCACAGGCCGGGCUCACAGCACCAUGACAGGCUCUGGGGUGGAUGCCAGGACAGCCAGCUCCGGGAGCAGCGUGUGGGAAGGACAGCUGCAGAGCCUGGUGCUGUCAGAAUAUGCAPCCACAGAGAUGAGCCUGCAUGCCCUCUAUAUGCACCAGCUCCACAAGCAGCAGGCCCAGGCUGAACCUGAGCGGCAUGUAUGGCACCGCCGGGAGAGUGAUGAGAGUGGAGAAAGCGCCCCUGAUGAAGGGGGAGAGGGCGCCCGGGCCCCCCAGUCUAUCCCUCGCUCUGCUAGCUAUCCCUGUGCAGCACCCCGGCCUGGAGCUCCUGAGЖCCACUGCCCUGCAUGGGGGCUUCCAGAGGCGCUACGGUGGCAUCACAGAUCCUGGCACAGUGCCCAGGGUUCCCUCUCAUUUCUCUCGGCUGCCUCUUGGAGGGUGGGCAGAAGAUGGGCAGUCGGCAUCAAGGCACCCUGAGCCCGUGCCCGAAGAGGGCUCGGAGGAUGAGCUACCCCCUCAGGUGCACAAGGUAUAG
Sequence (SHORT NAMES ENCODING)	AGACACCCGGCCUAGCGCCGCGGGUCGCGCCGAGCCGAGCCGAGCCGAGCGGAGCCGGCGGAGCCUCUGGAAUCACCCGGGUCGCUGUUCCUGAGCACCUUGGCACCAUAUUGAAAACCUUGACCUCUUCUUCUCUCGAGUUUAUAAUCUGCACCAGAAGAAUGGCUUCACAUGUAUGCUCAUCGGGGAGAUCUUUGAGCUCAUGCAGUUCCUCUUUGUGGUUGCCUUCACUACCUUCCUGGUCAGCUGCGUGGACUAUGACAYCCUAUUUGCCAACAAGAUGGUGAACCACAGUCUUCACCCUACUGAACCCGUCAAGGUCACUCUGCCAGACGCCUUUUUGCCUGCUCAAGUCUGUAGUGCCAGGAUUCAGGAAAAUGGCUCCCUUAUCACCAUCCUGGUCAUUGCUGGUGUCUUCUGGAUCCACCGGCUUAUCAAGUUCAUCUAUAACAUUUGCUGCUACUGGGAGAUCCACUCCUUCUACCUGCACGCUCUGCGCAUCCCUAUGUCUGCCCUUCCGUAUUGCACGUGGCAAGAAGUGCAGGCCCGGAUCGUGCAGACGCAGAAGGAGCACCAGAUCUGCAYCCACAAACGUGAGCUGACAGAACUGGACAUCUACCACCGCAYCCYCCGUUUCCAGAACUACAUGGUGGCACUGGUUAACAAAUCCCUCCUGCCUCUGCGCUUCCGCCUGCCUGGCCUCGGGGAAGCUGUCUUCUUCACCCGUGGUCUCAAGUACAACUUUGAGCUGAUCCUCUUCUGGGGACCUGGCUCUCUGUUUCUCAAUGAAUGGAGCCUCAAGGCCGAGUACAAACGUGGGGGGCAACGGCUAGAGCUGGCCCAGCGCCUCAGCAACCGCAUCCUGUGGAUUGGCAUCGCUAm6ACUUCCUGCUGUGCCCCCUCAYCCUCAUAUGGCAAAUCCUCUAUGCCUUCUUCAGCUAUGCUGAGGUGCUGAAGCGGGAGCCGGGGGCCCUGGGAGCACGCUGCUGGUCACUCUAUGGCCGCUGCUACCUCCGCCACUUCAACGAGCUGGAGCACGAGCUGCAGUCCCGCCUCAACCGUGGCUACAAGCCCGCCUCCAAGUACAUGAAUUGCUUCUUGUCACCUCUUUUGACACUGCUGGCCAAGAAUGGAGCCUUCUUCGCUGGCUCCAYCCUGGCUGUGCUUAUUGCCCUCACCAUUUAUGACGAAGAUGUGUUGGCUGUGGAACAUGUGCUGACCACCGUCACACUCCUGGGGGUCACCGUGACCGUGUGCAGGUCCUYUAUCCCGGACCAGCACAUGGUGUUCUGCCCUGAGCAGCUGCUCCGCGUGAUCCUCGCUCACAYCCACUACAUGCCUGACCACUGGCAGGGUAAUGCCCACCGCUCGCAGACCCGGGACGAGUUUGCCCAGCUCUUCCAGUACAAGGCAGUGUUCAUUUUGGAAGAGUUGCUGAGCCCCAUUGUCACACCCCUCAYCCUCAUCUUCUGCCUGCGCCCACGGGCCCUGGAGAUUAUAGACUUCUUCCGAAACUUCACCGUGGAGGUCGUUGGUGUGGGAGAUACCUGCUCCUUUGCUCAGAUGGAUGUUCGCCAGCAUGGUCAUCCCCAGUGGCUAUCUGCUGGGCAGACAGAGGCCUCAGUGUACCAGCAAGCUGAGGAUGGAAAGACAGAGUUGUCACUCAUGCACUUUGCCAUCACCAACCCUGGCUGGCAGCCACCACGUGAGAGCACAGCCUUCCUAGGCUUCCUCAAGGAGCAGGUUCAGCGGGAUGGAGCAGCUGCUAGCCUCGCCCAAGGGGGUCUGCUCCCUGAAAAUGCCCUCUYUACGUCUAUCCAGUCCUUACAAUCUGAGUCUGAGCCCCUGAGCCUUAUCGCAAAUGUGGUAGCUGGCUCAYCCUGCCGGGGCCCUCCACUGCCCAGAGACCUGCAGGGCUCCAGGCACAGGGCUGAAGUCGCCUCUGCCCUGCGCUCCUUCUCCCCGCUGCAACCCGGGCAGGCGCCCACAGGCCGGGCUCACAGCACCAUGACAGGCUCUGGGGUGGAUGCCAGGACAGCCAGCUCCGGGAGCAGCGUGUGGGAAGGACAGCUGCAGAGCCUGGUGCUGUCAGAAUAUGCAYCCACAGAGAUGAGCCUGCAUGCCCUCUAUAUGCACCAGCUCCACAAGCAGCAGGCCCAGGCUGAACCUGAGCGGCAUGUAUGGCACCGCCGGGAGAGUGAUGAGAGUGGAGAAAGCGCCCCUGAUGAAGGGGGAGAGGGCGCCCGGGCCCCCCAGUCUAUCCCUCGCUCUGCUAGCUAUCCCUGUGCAGCACCCCGGCCUGGAGCUCCUGAGm6ACCACUGCCCUGCAUGGGGGCUUCCAGAGGCGCUACGGUGGCAUCACAGAUCCUGGCACAGUGCCCAGGGUUCCCUCUCAUUUCUCUCGGCUGCCUCUUGGAGGGUGGGCAGAAGAUGGGCAGUCGGCAUCAAGGCACCCUGAGCCCGUGCCCGAAGAGGGCUCGGAGGAUGAGCUACCCCCUCAGGUGCACAAGGUAUAG
Sequence (MODOMICS CODE ENCODING)	AGACACCCGGCCUAGCGCCGCGGGUCGCGCCGAGCCGAGCCGAGCCGAGCGGAGCCGGCGGAGCCUCUGGAAUCACCCGGGUCGCUGUUCCUGAGCACCUUGGCACCAUAUUGAAAACCUUGACCUCUUCUUCUCUCGAGUUUAUAAUCUGCACCAGAAGAAUGGCUUCACAUGUAUGCUCAUCGGGGAGAUCUUUGAGCUCAUGCAGUUCCUCUUUGUGGUUGCCUUCACUACCUUCCUGGUCAGCUGCGUGGACUAUGACA2000000009UCCUAUUUGCCAACAAGAUGGUGAACCACAGUCUUCACCCUACUGAACCCGUCAAGGUCACUCUGCCAGACGCCUUUUUGCCUGCUCAAGUCUGUAGUGCCAGGAUUCAGGAAAAUGGCUCCCUUAUCACCAUCCUGGUCAUUGCUGGUGUCUUCUGGAUCCACCGGCUUAUCAAGUUCAUCUAUAACAUUUGCUGCUACUGGGAGAUCCACUCCUUCUACCUGCACGCUCUGCGCAUCCCUAUGUCUGCCCUUCCGUAUUGCACGUGGCAAGAAGUGCAGGCCCGGAUCGUGCAGACGCAGAAGGAGCACCAGAUCUGCA2000000009UCCACAAACGUGAGCUGACAGAACUGGACAUCUACCACCGCA2000000009UCC2000000009UCCGUUUCCAGAACUACAUGGUGGCACUGGUUAACAAAUCCCUCCUGCCUCUGCGCUUCCGCCUGCCUGGCCUCGGGGAAGCUGUCUUCUUCACCCGUGGUCUCAAGUACAACUUUGAGCUGAUCCUCUUCUGGGGACCUGGCUCUCUGUUUCUCAAUGAAUGGAGCCUCAAGGCCGAGUACAAACGUGGGGGGCAACGGCUAGAGCUGGCCCAGCGCCUCAGCAACCGCAUCCUGUGGAUUGGCAUCGCUA2000000006ACUUCCUGCUGUGCCCCCUCA2000000009UCCUCAUAUGGCAAAUCCUCUAUGCCUUCUUCAGCUAUGCUGAGGUGCUGAAGCGGGAGCCGGGGGCCCUGGGAGCACGCUGCUGGUCACUCUAUGGCCGCUGCUACCUCCGCCACUUCAACGAGCUGGAGCACGAGCUGCAGUCCCGCCUCAACCGUGGCUACAAGCCCGCCUCCAAGUACAUGAAUUGCUUCUUGUCACCUCUUUUGACACUGCUGGCCAAGAAUGGAGCCUUCUUCGCUGGCUCCA2000000009UCCUGGCUGUGCUUAUUGCCCUCACCAUUUAUGACGAAGAUGUGUUGGCUGUGGAACAUGUGCUGACCACCGUCACACUCCUGGGGGUCACCGUGACCGUGUGCAGGUCCU2000000009UUAUCCCGGACCAGCACAUGGUGUUCUGCCCUGAGCAGCUGCUCCGCGUGAUCCUCGCUCACA2000000009UCCACUACAUGCCUGACCACUGGCAGGGUAAUGCCCACCGCUCGCAGACCCGGGACGAGUUUGCCCAGCUCUUCCAGUACAAGGCAGUGUUCAUUUUGGAAGAGUUGCUGAGCCCCAUUGUCACACCCCUCA2000000009UCCUCAUCUUCUGCCUGCGCCCACGGGCCCUGGAGAUUAUAGACUUCUUCCGAAACUUCACCGUGGAGGUCGUUGGUGUGGGAGAUACCUGCUCCUUUGCUCAGAUGGAUGUUCGCCAGCAUGGUCAUCCCCAGUGGCUAUCUGCUGGGCAGACAGAGGCCUCAGUGUACCAGCAAGCUGAGGAUGGAAAGACAGAGUUGUCACUCAUGCACUUUGCCAUCACCAACCCUGGCUGGCAGCCACCACGUGAGAGCACAGCCUUCCUAGGCUUCCUCAAGGAGCAGGUUCAGCGGGAUGGAGCAGCUGCUAGCCUCGCCCAAGGGGGUCUGCUCCCUGAAAAUGCCCUCU2000000009UUACGUCUAUCCAGUCCUUACAAUCUGAGUCUGAGCCCCUGAGCCUUAUCGCAAAUGUGGUAGCUGGCUCA2000000009UCCUGCCGGGGCCCUCCACUGCCCAGAGACCUGCAGGGCUCCAGGCACAGGGCUGAAGUCGCCUCUGCCCUGCGCUCCUUCUCCCCGCUGCAACCCGGGCAGGCGCCCACAGGCCGGGCUCACAGCACCAUGACAGGCUCUGGGGUGGAUGCCAGGACAGCCAGCUCCGGGAGCAGCGUGUGGGAAGGACAGCUGCAGAGCCUGGUGCUGUCAGAAUAUGCA2000000009UCCACAGAGAUGAGCCUGCAUGCCCUCUAUAUGCACCAGCUCCACAAGCAGCAGGCCCAGGCUGAACCUGAGCGGCAUGUAUGGCACCGCCGGGAGAGUGAUGAGAGUGGAGAAAGCGCCCCUGAUGAAGGGGGAGAGGGCGCCCGGGCCCCCCAGUCUAUCCCUCGCUCUGCUAGCUAUCCCUGUGCAGCACCCCGGCCUGGAGCUCCUGAG2000000006ACCACUGCCCUGCAUGGGGGCUUCCAGAGGCGCUACGGUGGCAUCACAGAUCCUGGCACAGUGCCCAGGGUUCCCUCUCAUUUCUCUCGGCUGCCUCUUGGAGGGUGGGCAGAAGAUGGGCAGUCGGCAUCAAGGCACCCUGAGCCCGUGCCCGAAGAGGGCUCGGAGGAUGAGCUACCCCCUCAGGUGCACAAGGUAUAG

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	264	585	627	630	882	903	1152	1263	1326	1458	1806	1877	2099	2312
Modification Positions	Y	Y	Y	Y	m6A	Y	Y	Y	Y	Y	Y	Y	Y	m6A
Genomic Coordinates	2:219225513:-	2:219224778:-	2:219224736:-	2:219224733:-	2:219224481:-	2:219224460:-	2:219224211:-	2:219224017:-	2:219223954:-	2:219223718:-	2:219222679:-	2:219222414:-	2:219222088:-	2:219221128:-
Level of Experimental Evidence	3	3	3	3	3	3	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	BtsJQJ3DteUq S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq Yfn77uLS5tv8	msuJfBpJvM5H BtsJQJ3DteUq S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8