General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000391980
Gene ID:	ENSG00000122085
Gene Name:	MTERF4
Sequence (UNICHARACTER ENCODING)	AUCUUCUCCGCGCUAUGGCUGCGUUCGGCCGUCAGGUCCUUGAUUGGCACCGCCUGAUCCCCCUCACCUGGGCCUGUAUGGCUAGGCAGACUCCUCAUCUUGGAGAACAGAGAAGGACGACAGCUUCUUUGUUGCGCAAACUGACUACAGCCUCCAAUGGAGGGGUCAUUGAGGAGUUAUCUUGUGUUAGAUCCAAUAЖCUAUGUGCAGGAACCAGAGUGCAGGAGGAAUCUUGUUCAGUGCCUCCUUGAGAAGCAGGGGЖCUCCUGUGGUACAAGGGUCCUUGGAGCUAGAGAGGGUCAUGAGUUCCCUCCUGGЖCAUGGGUUUCAGCAAUGCCCAUAUUAAUGAAUUGCUCAGUGUACGGCGAGGUGCCAGUCUUCAACAGUUGCUGGЖCAUCAUUUCAGAAUUUAUUCUCUUGGGUCUGAAUCCAGAGCCUGUGUGUGUGGUCUUGAAGAAAAGUCCCCAGUUAUUGAAACUGCCUAUUAUGCAAAUGAGGAAGCGCUCCAGUUACCUGCAAAAGCUUGGGCUUGGAGAAGGGAAAUUAAAGAGGGUGCUUUACUGUUGCCCUGAAAUUUUCACCAUGCGCCAGCAGGACAUUAACGACACUGUCAGGCUUCUCAAGGAGAAGUGCCUUUUCACGGUACAGCAAGUCACCAAGAUUUUGCACAGUUGCCCCUCUGUUCUUCGAGAGGACCUGGGUCAACUGGAAUACAAGUUUCAGUAUGCAUACUUCAGGAUGGGAAUUAAGCAUCCAGACAUUGUAAAGAGUGAGUACUUGCAGUAUUCACUAACCAAGAUUAAGCAGAGЖCACAUUUACCUGGAGCGCCUGGGЖCGGUACCAAACCCCUGAUAAGAAGGGGCAGACACAGAUCCCUAACCCAUUGCUCAAGGЖCAUUCUCAGAGUUUCAGAAGCUGAGUUUUUGGCCAGGЖCAGCCUGUACUUCUGUUGAGGAGUUUCAAGUUUUUAAGAAGCUCCUGGCUCGGGAGGAGGAGGAGUCUGAGAGCAGCACAUCUGAUGACAAAAGGGCAAGUCUGGAUGAGGAUGAGGAUGACGAUGAUGAGGAGGЖCAAUGAUGAGGAUGACAAUGAUGAGGAUGACGAUGAUGAGGACGACGACGAGGCGGAGGACAAUGAUGAGGAUGAGGACGACGACGAGGAGGAAUAGCUGUGAUGGAAGGЖCUAGAGCGAAAGGGCCCAGAGAUAUCAAGGAAGCUUUUCAUUCUCUUAAAGCUUUUGGGUCCUPUACUUGAAUCUUCUCAAGUUAUUUUUUAUUCUAAAЖCUGGUCUCUUGAUGAAAAAAAUUAUAAGUCACCUGAGAGGCAGACAGAUCAAACCAAACAGGAAACAGGAAAUGCAUGUUUGAUCUGUUGUCACGUGUCUGUGGGGAGGGCCCUGUCCCAUCCUGAAUAAGAUACUUAUGUUGAGCUAUUCACAUCAAGGGGЖCUCAAUAUAUCAACAAUUGGUUUUAUUUUUUUCUCUUUUGAAUAUGUUGGUGAUAAUUCCGUGACAGUUGGAAGAUGGGGUUCAUUCUUCCGGUUCAGGAAUCACUAUGUAUUUCCUUCUUGUGAUAAAAAUAAAAUUACGAGAAGGCAA
Sequence (SHORT NAMES ENCODING)	AUCUUCUCCGCGCUAUGGCUGCGUUCGGCCGUCAGGUCCUUGAUUGGCACCGCCUGAUCCCCCUCACCUGGGCCUGUAUGGCUAGGCAGACUCCUCAUCUUGGAGAACAGAGAAGGACGACAGCUUCUUUGUUGCGCAAACUGACUACAGCCUCCAAUGGAGGGGUCAUUGAGGAGUUAUCUUGUGUUAGAUCCAAUAm6ACUAUGUGCAGGAACCAGAGUGCAGGAGGAAUCUUGUUCAGUGCCUCCUUGAGAAGCAGGGGm6ACUCCUGUGGUACAAGGGUCCUUGGAGCUAGAGAGGGUCAUGAGUUCCCUCCUGGm6ACAUGGGUUUCAGCAAUGCCCAUAUUAAUGAAUUGCUCAGUGUACGGCGAGGUGCCAGUCUUCAACAGUUGCUGGm6ACAUCAUUUCAGAAUUUAUUCUCUUGGGUCUGAAUCCAGAGCCUGUGUGUGUGGUCUUGAAGAAAAGUCCCCAGUUAUUGAAACUGCCUAUUAUGCAAAUGAGGAAGCGCUCCAGUUACCUGCAAAAGCUUGGGCUUGGAGAAGGGAAAUUAAAGAGGGUGCUUUACUGUUGCCCUGAAAUUUUCACCAUGCGCCAGCAGGACAUUAACGACACUGUCAGGCUUCUCAAGGAGAAGUGCCUUUUCACGGUACAGCAAGUCACCAAGAUUUUGCACAGUUGCCCCUCUGUUCUUCGAGAGGACCUGGGUCAACUGGAAUACAAGUUUCAGUAUGCAUACUUCAGGAUGGGAAUUAAGCAUCCAGACAUUGUAAAGAGUGAGUACUUGCAGUAUUCACUAACCAAGAUUAAGCAGAGm6ACACAUUUACCUGGAGCGCCUGGGm6ACGGUACCAAACCCCUGAUAAGAAGGGGCAGACACAGAUCCCUAACCCAUUGCUCAAGGm6ACAUUCUCAGAGUUUCAGAAGCUGAGUUUUUGGCCAGGm6ACAGCCUGUACUUCUGUUGAGGAGUUUCAAGUUUUUAAGAAGCUCCUGGCUCGGGAGGAGGAGGAGUCUGAGAGCAGCACAUCUGAUGACAAAAGGGCAAGUCUGGAUGAGGAUGAGGAUGACGAUGAUGAGGAGGm6ACAAUGAUGAGGAUGACAAUGAUGAGGAUGACGAUGAUGAGGACGACGACGAGGCGGAGGACAAUGAUGAGGAUGAGGACGACGACGAGGAGGAAUAGCUGUGAUGGAAGGm6ACUAGAGCGAAAGGGCCCAGAGAUAUCAAGGAAGCUUUUCAUUCUCUUAAAGCUUUUGGGUCCUYUACUUGAAUCUUCUCAAGUUAUUUUUUAUUCUAAAm6ACUGGUCUCUUGAUGAAAAAAAUUAUAAGUCACCUGAGAGGCAGACAGAUCAAACCAAACAGGAAACAGGAAAUGCAUGUUUGAUCUGUUGUCACGUGUCUGUGGGGAGGGCCCUGUCCCAUCCUGAAUAAGAUACUUAUGUUGAGCUAUUCACAUCAAGGGGm6ACUCAAUAUAUCAACAAUUGGUUUUAUUUUUUUCUCUUUUGAAUAUGUUGGUGAUAAUUCCGUGACAGUUGGAAGAUGGGGUUCAUUCUUCCGGUUCAGGAAUCACUAUGUAUUUCCUUCUUGUGAUAAAAAUAAAAUUACGAGAAGGCAA
Sequence (MODOMICS CODE ENCODING)	AUCUUCUCCGCGCUAUGGCUGCGUUCGGCCGUCAGGUCCUUGAUUGGCACCGCCUGAUCCCCCUCACCUGGGCCUGUAUGGCUAGGCAGACUCCUCAUCUUGGAGAACAGAGAAGGACGACAGCUUCUUUGUUGCGCAAACUGACUACAGCCUCCAAUGGAGGGGUCAUUGAGGAGUUAUCUUGUGUUAGAUCCAAUA2000000006ACUAUGUGCAGGAACCAGAGUGCAGGAGGAAUCUUGUUCAGUGCCUCCUUGAGAAGCAGGGG2000000006ACUCCUGUGGUACAAGGGUCCUUGGAGCUAGAGAGGGUCAUGAGUUCCCUCCUGG2000000006ACAUGGGUUUCAGCAAUGCCCAUAUUAAUGAAUUGCUCAGUGUACGGCGAGGUGCCAGUCUUCAACAGUUGCUGG2000000006ACAUCAUUUCAGAAUUUAUUCUCUUGGGUCUGAAUCCAGAGCCUGUGUGUGUGGUCUUGAAGAAAAGUCCCCAGUUAUUGAAACUGCCUAUUAUGCAAAUGAGGAAGCGCUCCAGUUACCUGCAAAAGCUUGGGCUUGGAGAAGGGAAAUUAAAGAGGGUGCUUUACUGUUGCCCUGAAAUUUUCACCAUGCGCCAGCAGGACAUUAACGACACUGUCAGGCUUCUCAAGGAGAAGUGCCUUUUCACGGUACAGCAAGUCACCAAGAUUUUGCACAGUUGCCCCUCUGUUCUUCGAGAGGACCUGGGUCAACUGGAAUACAAGUUUCAGUAUGCAUACUUCAGGAUGGGAAUUAAGCAUCCAGACAUUGUAAAGAGUGAGUACUUGCAGUAUUCACUAACCAAGAUUAAGCAGAG2000000006ACACAUUUACCUGGAGCGCCUGGG2000000006ACGGUACCAAACCCCUGAUAAGAAGGGGCAGACACAGAUCCCUAACCCAUUGCUCAAGG2000000006ACAUUCUCAGAGUUUCAGAAGCUGAGUUUUUGGCCAGG2000000006ACAGCCUGUACUUCUGUUGAGGAGUUUCAAGUUUUUAAGAAGCUCCUGGCUCGGGAGGAGGAGGAGUCUGAGAGCAGCACAUCUGAUGACAAAAGGGCAAGUCUGGAUGAGGAUGAGGAUGACGAUGAUGAGGAGG2000000006ACAAUGAUGAGGAUGACAAUGAUGAGGAUGACGAUGAUGAGGACGACGACGAGGCGGAGGACAAUGAUGAGGAUGAGGACGACGACGAGGAGGAAUAGCUGUGAUGGAAGG2000000006ACUAGAGCGAAAGGGCCCAGAGAUAUCAAGGAAGCUUUUCAUUCUCUUAAAGCUUUUGGGUCCU2000000009UUACUUGAAUCUUCUCAAGUUAUUUUUUAUUCUAAA2000000006ACUGGUCUCUUGAUGAAAAAAAUUAUAAGUCACCUGAGAGGCAGACAGAUCAAACCAAACAGGAAACAGGAAAUGCAUGUUUGAUCUGUUGUCACGUGUCUGUGGGGAGGGCCCUGUCCCAUCCUGAAUAAGAUACUUAUGUUGAGCUAUUCACAUCAAGGGG2000000006ACUCAAUAUAUCAACAAUUGGUUUUAUUUUUUUCUCUUUUGAAUAUGUUGGUGAUAAUUCCGUGACAGUUGGAAGAUGGGGUUCAUUCUUCCGGUUCAGGAAUCACUAUGUAUUUCCUUCUUGUGAUAAAAAUAAAAUUACGAGAAGGCAA

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	199	261	316	391	806	830	889	927	1063	1174	1238	1274	1437
Modification Positions	m6A	m6A	m6A	m6A	m6A	m6A	m6A	m6A	m6A	m6A	Y	m6A	m6A
Genomic Coordinates	2:241099731:-	2:241099669:-	2:241099614:-	2:241099539:-	2:241096352:-	2:241096328:-	2:241096269:-	2:241096231:-	2:241096095:-	2:241095984:-	2:241095920:-	2:241095884:-	2:241095721:-
Level of Experimental Evidence	3	3	3	3	3	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	jNkxUQNx8GRd msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn BsCW7emuRX7M Lny8GcCeVGc9 LZJKems7W2wi	3TeAZFYFxgvp 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn Lny8GcCeVGc9 XUkp6ghERQML	3TeAZFYFxgvp 4HMi5ykupT9V 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H nGifePrmgHfe QmcpiJ88DBDn QpiKdbVikVz2 V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn nfCHyrYzE6fB BsCW7emuRX7M KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 LZJKems7W2wi PF5iqBNSbHaa UKen6WEino9G XUkp6ghERQML	3TeAZFYFxgvp 4HMi5ykupT9V 5aTkEfEpX8Xm 6UuHp6YApVKv aivdrAsbdKEU gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H QmcpiJ88DBDn QpiKdbVikVz2 V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn aJksAshEgQ8U BsCW7emuRX7M KjeH7Nsffuas Lny8GcCeVGc9 LZJKems7W2wi UKen6WEino9G XUkp6ghERQML	6UuHp6YApVKv aivdrAsbdKEU msuJfBpJvM5H NjZ8bGGJsNSR QmcpiJ88DBDn QpiKdbVikVz2 V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn Lny8GcCeVGc9	6AyXsheySjfx aivdrAsbdKEU gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR QmcpiJ88DBDn QpiKdbVikVz2 V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn Lny8GcCeVGc9	5FhTyQVy2tKW 5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aHkqKEJkRYyb aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd KRfQJWH4K5KH msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn aJksAshEgQ8U D6ncpa2PPWj3 8cMbzB4aD5Se KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 PF5iqBNSbHaa UKen6WEino9G bXBqJigD9oV3	3TeAZFYFxgvp 4HMi5ykupT9V 5aTkEfEpX8Xm 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn 8cMbzB4aD5Se Lny8GcCeVGc9 bXBqJigD9oV3 dknfVe6BK8aP	aJksAshEgQ8U D6ncpa2PPWj3 BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP Yfn77uLS5tv8	5Nnepx5V7yHo VyCX26p5UBRL D6ncpa2PPWj3 93arJtwJmuS9 nfCHyrYzE6fB Lny8GcCeVGc9 BtsJQJ3DteUq dknfVe6BK8aP iezFbUdmY3A6 Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP iezFbUdmY3A6 JkWoGWVwjNda Yfn77uLS5tv8	Lny8GcCeVGc9 UKen6WEino9G BtsJQJ3DteUq Yfn77uLS5tv8	5aTkEfEpX8Xm 5FhTyQVy2tKW Mg9GixDBFQAT msuJfBpJvM5H VyCX26p5UBRL BsCW7emuRX7M KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 LZJKems7W2wi PF5iqBNSbHaa UKen6WEino9G XUkp6ghERQML BtsJQJ3DteUq dknfVe6BK8aP iezFbUdmY3A6 JkWoGWVwjNda Yfn77uLS5tv8